View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15039_high_13 (Length: 333)
Name: NF15039_high_13
Description: NF15039
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15039_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 16 - 310
Target Start/End: Original strand, 24598915 - 24599209
Alignment:
| Q |
16 |
ttttcaactataaatatcttgtcttgaataaagtaataaactcatcatatcatatgtgcaaatttgtgattcgagcgggagtgattagtccacattcgat |
115 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |
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| T |
24598915 |
ttttcaactataaatatcttgtcttgaataaaataataaactcatcatatcatatgtgcaaatttgtgattcgagcgggagtggttagtccacattagat |
24599014 |
T |
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| Q |
116 |
aaaaattggccaaataaattaaatgatgtataagtcttaaaatattctctnnnnnnnntcttaccgtatatgattcatatatttaatgttgtaagattat |
215 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |
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| T |
24599015 |
aaaaattggccaaataaattaaatgatgtataactcttaaaatattctctaaaaaatatcttaccgtatatgattcatatatttaatgttgtaagatttt |
24599114 |
T |
|
| Q |
216 |
agatggaggtgtaatgctatgactcgtaagtgttttgattatttgttcgttgttcacgatgctctctaatcttcgttaagtacaacacccacacc |
310 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||| |
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| T |
24599115 |
agatggaggtgtaatgctatgactcttaagtgttttgattatttgttcgatgttcacgatactctctaatcttcgttgagtacaacacccacacc |
24599209 |
T |
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