View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15039_high_16 (Length: 281)

Name: NF15039_high_16
Description: NF15039
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15039_high_16
NF15039_high_16
[»] chr8 (25 HSPs)
chr8 (1-264)||(20232227-20232495)
chr8 (1-102)||(35908684-35908795)
chr8 (1-49)||(8276555-8276603)
chr8 (1-102)||(17607201-17607312)
chr8 (1-101)||(15711502-15711612)
chr8 (1-49)||(14019814-14019862)
chr8 (1-49)||(18464076-18464124)
chr8 (1-49)||(38287787-38287835)
chr8 (3-49)||(35561674-35561720)
chr8 (1-49)||(18905862-18905910)
chr8 (1-49)||(20298566-20298614)
chr8 (1-49)||(21085198-21085246)
chr8 (1-49)||(32931407-32931455)
chr8 (1-49)||(34248365-34248413)
chr8 (3-49)||(5720917-5720963)
chr8 (3-49)||(43599319-43599365)
chr8 (9-49)||(3183961-3184001)
chr8 (1-49)||(9596043-9596091)
chr8 (1-49)||(9596269-9596317)
chr8 (1-49)||(14582236-14582284)
chr8 (1-49)||(23027555-23027603)
chr8 (1-49)||(23027878-23027926)
chr8 (1-49)||(34248083-34248131)
chr8 (1-49)||(39587908-39587956)
chr8 (1-49)||(40754451-40754498)
[»] chr7 (42 HSPs)
chr7 (1-264)||(44314134-44314402)
chr7 (1-102)||(33909143-33909254)
chr7 (1-102)||(27585262-27585373)
chr7 (1-98)||(34748784-34748891)
chr7 (1-102)||(36270457-36270568)
chr7 (1-102)||(36495895-36496006)
chr7 (1-102)||(47346081-47346192)
chr7 (1-102)||(47346310-47346421)
chr7 (1-99)||(36495672-36495780)
chr7 (1-102)||(34914907-34915018)
chr7 (1-96)||(37756158-37756262)
chr7 (4-102)||(36270684-36270792)
chr7 (1-49)||(20296269-20296317)
chr7 (1-49)||(39550028-39550076)
chr7 (1-49)||(43384330-43384378)
chr7 (1-102)||(24240181-24240276)
chr7 (1-96)||(37755932-37756036)
chr7 (1-96)||(37761906-37762010)
chr7 (1-49)||(36092442-36092490)
chr7 (1-49)||(36092649-36092697)
chr7 (1-49)||(37530973-37531021)
chr7 (1-102)||(24240393-24240488)
chr7 (1-87)||(7135245-7135341)
chr7 (1-49)||(257317-257365)
chr7 (1-49)||(19843713-19843761)
chr7 (1-49)||(22206328-22206376)
chr7 (1-49)||(22228363-22228411)
chr7 (1-49)||(40121989-40122037)
chr7 (3-49)||(6813128-6813174)
chr7 (15-49)||(14991559-14991593)
chr7 (15-49)||(15421170-15421204)
chr7 (50-96)||(33909371-33909417)
chr7 (3-49)||(36237810-36237856)
chr7 (1-46)||(1663658-1663703)
chr7 (50-103)||(27729460-27729513)
chr7 (1-49)||(1661241-1661289)
chr7 (5-49)||(22686783-22686827)
chr7 (1-49)||(28910038-28910086)
chr7 (1-49)||(37272095-37272143)
chr7 (1-49)||(41670589-41670637)
chr7 (1-49)||(43167943-43167991)
chr7 (1-49)||(43383996-43384044)
[»] chr1 (29 HSPs)
chr1 (1-102)||(17294984-17295095)
chr1 (1-102)||(29228454-29228565)
chr1 (1-102)||(12287854-12287965)
chr1 (1-102)||(29228681-29228792)
chr1 (1-102)||(45858661-45858772)
chr1 (1-98)||(4187505-4187611)
chr1 (1-49)||(28509437-28509485)
chr1 (1-102)||(33562114-33562225)
chr1 (1-49)||(40642826-40642874)
chr1 (1-48)||(45443226-45443273)
chr1 (1-92)||(51722259-51722361)
chr1 (1-49)||(2697381-2697429)
chr1 (1-49)||(4022175-4022223)
chr1 (1-49)||(18585044-18585092)
chr1 (1-49)||(19937093-19937141)
chr1 (1-49)||(27958097-27958145)
chr1 (1-49)||(40521543-40521591)
chr1 (1-102)||(31411543-31411658)
chr1 (1-45)||(4187336-4187380)
chr1 (1-49)||(17419793-17419841)
chr1 (1-49)||(27957859-27957907)
chr1 (1-49)||(30604510-30604558)
chr1 (1-49)||(38474289-38474337)
chr1 (1-48)||(8520144-8520191)
chr1 (1-47)||(29383675-29383721)
chr1 (3-49)||(39649134-39649180)
chr1 (56-100)||(30604449-30604493)
chr1 (1-49)||(31305717-31305765)
chr1 (1-49)||(37600878-37600926)
[»] chr4 (37 HSPs)
chr4 (1-98)||(46528914-46529021)
chr4 (1-98)||(11290175-11290282)
chr4 (1-98)||(50868004-50868111)
chr4 (1-103)||(2016538-2016650)
chr4 (1-46)||(4026079-4026124)
chr4 (1-102)||(33912049-33912160)
chr4 (1-49)||(51469487-51469535)
chr4 (1-48)||(13254389-13254436)
chr4 (1-46)||(37288922-37288967)
chr4 (1-49)||(5427134-5427182)
chr4 (1-49)||(15665159-15665207)
chr4 (1-49)||(22867090-22867138)
chr4 (1-49)||(29669413-29669461)
chr4 (1-49)||(37097781-37097829)
chr4 (1-49)||(43972045-43972093)
chr4 (1-45)||(51470489-51470533)
chr4 (1-49)||(52810675-52810723)
chr4 (1-49)||(53740188-53740236)
chr4 (5-48)||(33797160-33797203)
chr4 (3-49)||(3055791-3055837)
chr4 (3-49)||(7198036-7198082)
chr4 (1-43)||(43798183-43798225)
chr4 (3-49)||(43943681-43943727)
chr4 (7-49)||(49544344-49544386)
chr4 (3-49)||(52827282-52827328)
chr4 (1-50)||(36558515-36558564)
chr4 (65-102)||(42901887-42901924)
chr4 (1-46)||(47845794-47845839)
chr4 (4-49)||(49380669-49380714)
chr4 (1-49)||(990553-990601)
chr4 (1-49)||(29669728-29669776)
chr4 (1-49)||(43972361-43972409)
chr4 (1-49)||(45426986-45427034)
chr4 (1-49)||(50858334-50858382)
chr4 (1-49)||(53738258-53738306)
chr4 (1-49)||(53739872-53739920)
chr4 (1-49)||(56509615-56509663)
[»] chr5 (34 HSPs)
chr5 (5-102)||(5095888-5095990)
chr5 (1-98)||(30329842-30329949)
chr5 (1-102)||(32395301-32395412)
chr5 (1-98)||(83802-83908)
chr5 (1-96)||(84027-84132)
chr5 (1-102)||(2471680-2471791)
chr5 (1-102)||(29396330-29396441)
chr5 (1-98)||(22196317-22196424)
chr5 (1-49)||(38131770-38131818)
chr5 (3-46)||(395375-395418)
chr5 (1-48)||(14769883-14769930)
chr5 (1-102)||(30330067-30330180)
chr5 (1-92)||(22196550-22196651)
chr5 (1-49)||(873746-873794)
chr5 (1-49)||(1028143-1028191)
chr5 (5-49)||(9850483-9850527)
chr5 (1-49)||(19439866-19439914)
chr5 (1-49)||(29432418-29432466)
chr5 (1-41)||(33040291-33040331)
chr5 (1-49)||(37995684-37995732)
chr5 (1-49)||(39668467-39668515)
chr5 (1-48)||(27760081-27760128)
chr5 (50-100)||(24792111-24792161)
chr5 (7-49)||(30870935-30870977)
chr5 (1-43)||(33040476-33040518)
chr5 (3-49)||(35527038-35527084)
chr5 (3-49)||(38376739-38376785)
chr5 (3-49)||(43490306-43490352)
chr5 (4-49)||(3762915-3762960)
chr5 (1-102)||(24792254-24792364)
chr5 (1-49)||(396266-396314)
chr5 (1-49)||(13843703-13843751)
chr5 (1-49)||(13844019-13844067)
chr5 (50-102)||(33040535-33040587)
[»] chr3 (40 HSPs)
chr3 (1-102)||(24453784-24453895)
chr3 (1-98)||(48511401-48511508)
chr3 (1-98)||(48511630-48511737)
chr3 (1-98)||(10450639-10450746)
chr3 (1-92)||(15820602-15820703)
chr3 (1-102)||(9180374-9180485)
chr3 (1-94)||(11244536-11244639)
chr3 (1-49)||(53966239-53966287)
chr3 (5-104)||(42190462-42190570)
chr3 (1-50)||(51734606-51734655)
chr3 (1-98)||(10450415-10450522)
chr3 (1-49)||(13769341-13769389)
chr3 (1-49)||(22666368-22666416)
chr3 (1-49)||(45443286-45443334)
chr3 (1-49)||(54369045-54369093)
chr3 (1-49)||(5321586-5321634)
chr3 (1-49)||(9178913-9178961)
chr3 (1-49)||(10453753-10453801)
chr3 (1-49)||(10856676-10856724)
chr3 (50-102)||(16051522-16051574)
chr3 (1-49)||(27219335-27219383)
chr3 (50-98)||(40769903-40769951)
chr3 (1-49)||(41380730-41380778)
chr3 (1-49)||(43101421-43101469)
chr3 (1-49)||(44573332-44573380)
chr3 (1-49)||(47833712-47833760)
chr3 (55-102)||(53966323-53966370)
chr3 (1-47)||(2800013-2800059)
chr3 (3-49)||(4029694-4029740)
chr3 (56-98)||(10856617-10856659)
chr3 (3-49)||(42258918-42258964)
chr3 (3-49)||(49477542-49477588)
chr3 (3-49)||(54495539-54495585)
chr3 (1-49)||(3985779-3985827)
chr3 (1-49)||(9179139-9179187)
chr3 (50-102)||(16060872-16060924)
chr3 (1-49)||(34715505-34715553)
chr3 (1-49)||(48685367-48685415)
chr3 (1-49)||(48837058-48837106)
chr3 (1-49)||(50203907-50203955)
[»] chr2 (42 HSPs)
chr2 (1-102)||(10862045-10862156)
chr2 (1-96)||(936818-936923)
chr2 (1-102)||(15962144-15962255)
chr2 (1-102)||(39420703-39420814)
chr2 (1-104)||(33532721-33532834)
chr2 (1-49)||(4506090-4506138)
chr2 (1-102)||(10862312-10862423)
chr2 (1-102)||(11350174-11350285)
chr2 (1-49)||(14280286-14280334)
chr2 (1-102)||(32810863-32810974)
chr2 (1-49)||(10861884-10861932)
chr2 (1-49)||(11349843-11349891)
chr2 (50-102)||(15961787-15961839)
chr2 (1-49)||(21213935-21213983)
chr2 (1-96)||(17325176-17325281)
chr2 (3-49)||(26847292-26847338)
chr2 (1-46)||(28193388-28193433)
chr2 (1-49)||(3976521-3976569)
chr2 (1-49)||(3977053-3977101)
chr2 (1-49)||(21214251-21214299)
chr2 (1-49)||(28193625-28193673)
chr2 (1-49)||(43169248-43169296)
chr2 (1-48)||(30166130-30166177)
chr2 (1-96)||(36161340-36161445)
chr2 (3-49)||(883651-883697)
chr2 (3-49)||(884065-884111)
chr2 (3-49)||(6986466-6986512)
chr2 (3-49)||(12419846-12419892)
chr2 (3-49)||(12431906-12431952)
chr2 (3-49)||(12432113-12432159)
chr2 (3-49)||(17727412-17727458)
chr2 (12-49)||(14289143-14289180)
chr2 (4-49)||(27545166-27545211)
chr2 (1-45)||(3976209-3976253)
chr2 (1-49)||(4342308-4342356)
chr2 (5-49)||(6183416-6183460)
chr2 (1-49)||(11969058-11969106)
chr2 (1-49)||(18901914-18901962)
chr2 (1-49)||(25441702-25441750)
chr2 (1-49)||(43195790-43195838)
chr2 (8-48)||(43688472-43688512)
chr2 (1-49)||(44266358-44266406)
[»] chr6 (20 HSPs)
chr6 (1-102)||(26842726-26842837)
chr6 (1-102)||(25184216-25184327)
chr6 (1-49)||(33396313-33396361)
chr6 (1-49)||(1744892-1744940)
chr6 (1-49)||(8144023-8144071)
chr6 (1-49)||(12134533-12134581)
chr6 (1-49)||(19753654-19753702)
chr6 (1-49)||(21067107-21067155)
chr6 (1-49)||(21088898-21088946)
chr6 (1-102)||(25184009-25184120)
chr6 (1-49)||(26339892-26339940)
chr6 (1-49)||(27443587-27443635)
chr6 (50-102)||(30718746-30718798)
chr6 (2-49)||(16194027-16194074)
chr6 (1-48)||(24055160-24055207)
chr6 (7-49)||(33396537-33396579)
chr6 (50-102)||(8427615-8427667)
chr6 (1-49)||(10733488-10733536)
chr6 (1-49)||(17096748-17096796)
chr6 (1-49)||(21043831-21043879)
[»] scaffold0785 (1 HSPs)
scaffold0785 (1-49)||(3170-3218)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-49)||(165790-165838)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-49)||(43726-43774)
[»] scaffold0029 (1 HSPs)
scaffold0029 (3-87)||(76860-76954)
[»] scaffold0166 (2 HSPs)
scaffold0166 (50-100)||(34494-34544)
scaffold0166 (1-102)||(34637-34747)


Alignment Details
Target: chr8 (Bit Score: 229; Significance: 1e-126; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 20232495 - 20232227
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagagtcaccgtacaatccggttttgtatagatgagttaggcctcgatattcgtta 100  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  20232495 ttagtcccacatcggatagatgagattcttgagaagagtttataaagagtcaccgtacaagccggttttgtatagatgagttaggcctcgatattcatta 20232396  T
Q  101 cacttattaagcat-----gccattaacaaaaataatcaagcgtaaaatgcaactttgcatttgcttaggaactaaggattagttctttctttcattaaa 195  Q
    ||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20232395 cacttattaagcatttgaagccattaacaaaaataatcaagcgtaaaatgcaactttgcatttgcttaggaactaaggattagttctttctttcattaaa 20232296  T
Q  196 caaaggaagaacaaggctagtggaagtggtttgaaatgatgaattttcactcttattcatcttttcacc 264  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20232295 caaaggaagaacagggctagtggaagtggtttgaaatgatgaattttcactcttattcatcttttcacc 20232227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 35908684 - 35908795
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| || ||||| |||| ||||||||||||||||||||||          ||||||||||| |||||||||||  ||||||||||||||||    
T  35908684 ttagtcccacatcgggtagataggatacttgagaagagtttataaagagaaggcactcctcaccgtacaagccggttttgtaaggatgagttaggcctcg 35908783  T
Q  91 atattcgttaca 102  Q
    ||||||||||||    
T  35908784 atattcgttaca 35908795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 8276555 - 8276603
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8276555 ttagtcccacattggatagataggattcttgagaagagtttataaagag 8276603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 17607312 - 17607201
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||| ||||| |||||||| ||||||||| |||||||||||||||||          ||||||||||| || ||||||||  ||||||||||||||||    
T  17607312 ttagtctcacatcggatagataggattcttgtgaagagtttataaagaggaggcactactcaccgtacaagccagttttgtaaggatgagttaggcctcg 17607213  T
Q  91 atattcgttaca 102  Q
    ||||||||||||    
T  17607212 atattcgttaca 17607201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 15711502 - 15711612
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||          ||||||||||| || ||||| ||  ||||||||||||||||    
T  15711502 ttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcctcaccgtacaagcctgttttatagggatgagttaggcctcg 15711601  T
Q  91 atattcgttac 101  Q
    |||||| ||||    
T  15711602 atattcattac 15711612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14019814 - 14019862
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| || ||||||||||||||||||||||||    
T  14019814 ttagtcccacatcggatagataggtttcttgagaagagtttataaagag 14019862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 18464076 - 18464124
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||  ||||||| |||||||||||||||||||||||||||    
T  18464076 ttagtcccacatcagatagataggattcttgagaagagtttataaagag 18464124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 38287835 - 38287787
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| |||||||||| ||||||||||||||||    
T  38287835 ttagtcccacatcggatagataggattcttgataagagtttataaagag 38287787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 35561674 - 35561720
Alignment:
Q  3 agtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||| ||||||||  ||||||||||||||||||||||||||    
T  35561674 agtcccacatcggatagataagattcttgagaagagtttataaagag 35561720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 18905862 - 18905910
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| | | |||||||||||||||||||||||    
T  18905862 ttagtcccacatcggatagatagcactcttgagaagagtttataaagag 18905910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20298614 - 20298566
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||| |||||||   |||||||||||||||||||||||||    
T  20298614 ttagtcccacatttgatagatattattcttgagaagagtttataaagag 20298566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21085246 - 21085198
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| | | |||||||||||||||||||||||    
T  21085246 ttagtcccacatcggatagatagcactcttgagaagagtttataaagag 21085198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 32931407 - 32931455
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| ||||||||   |||||||||||||||||||||||||    
T  32931407 ttagtcccacatcggatagatatcattcttgagaagagtttataaagag 32931455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 34248365 - 34248413
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||||| ||||| ||| |||||| ||||||||||||||||    
T  34248365 ttagtcccacattggttagataggactcttgataagagtttataaagag 34248413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 5720963 - 5720917
Alignment:
Q  3 agtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||| ||||||||  || |||||||||||||||||||||||    
T  5720963 agtcccacatcggatagataagactcttgagaagagtttataaagag 5720917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 43599319 - 43599365
Alignment:
Q  3 agtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||| ||||||||  || |||||||||||||||||||||||    
T  43599319 agtcccacatcggatagataagactcttgagaagagtttataaagag 43599365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 3184001 - 3183961
Alignment:
Q  9 acattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||| |||||||| ||| |||||||||||||||||||||||    
T  3184001 acatcggatagataggactcttgagaagagtttataaagag 3183961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 9596091 - 9596043
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||| |||||| |||||||| ||||||||||||| | |||||||||||    
T  9596091 ttagttccacatcggatagataggattcttgagaatattttataaagag 9596043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 9596317 - 9596269
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||| || || ||||||||  ||||||||||||||||||||||||||    
T  9596317 ttagtctcatatcggatagataagattcttgagaagagtttataaagag 9596269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14582236 - 14582284
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||| |||| ||  ||| ||||||||||||||||||||||    
T  14582236 ttagtcccacatttgataaatatgatacttgagaagagtttataaagag 14582284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 23027603 - 23027555
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||  ||||||| | | |||||||||||||||||||||||    
T  23027603 ttagtcccacatcagatagatagaactcttgagaagagtttataaagag 23027555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 23027926 - 23027878
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| | | |||||||||||| ||||||||||    
T  23027926 ttagtcccacataggatagatagaactcttgagaagagcttataaagag 23027878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 34248083 - 34248131
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| || ||||| ||| |||||| ||||||||||||||||    
T  34248083 ttagtcccacatcggttagataggactcttgataagagtttataaagag 34248131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 39587956 - 39587908
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||  ||| ||| ||||||| |||||||||||||||||||    
T  39587956 ttagtcccacatcagatggataggattctagagaagagtttataaagag 39587908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 40754451 - 40754498
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||  ||||||||||| |||||||||||| ||||||||||    
T  40754451 ttagtcccacatcagatagatgggactcttgagaagag-ttataaagag 40754498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 44314402 - 44314134
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagagtcaccgtacaatccggttttgtatagatgagttaggcctcgatattcgtta 100  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  44314402 ttagtcccacatcggatagatgagattcttgagaagagtttataaagagtcaccgtacaagccggttttgtatagatgagttaggcctcgatattcatta 44314303  T
Q  101 cacttattaagcat-----gccattaacaaaaataatcaagcgtaaaatgcaactttgcatttgcttaggaactaaggattagttctttctttcattaaa 195  Q
    ||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44314302 cacttattaagcatttgaagccattaacaaaaataatcaagcgtaaaatgcaactttgcatttgcttaggaactaaggattagttctttctttcattaaa 44314203  T
Q  196 caaaggaagaacaaggctagtggaagtggtttgaaatgatgaattttcactcttattcatcttttcacc 264  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44314202 caaaggaagaacagggctagtggaagtggtttgaaatgatgaattttcactcttattcatcttttcacc 44314134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 33909143 - 33909254
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||          |||| |||||| |||||||||||| ||||||||||||||||    
T  33909143 ttagtcccacatcggatagataggattcttgagaagagtttataaagaggatacactcctcactgtacaagccggttttgtatggatgagttaggcctcg 33909242  T
Q  91 atattcgttaca 102  Q
    |||||| |||||    
T  33909243 atattctttaca 33909254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 27585262 - 27585373
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| |||||||||||||||||||||||| ||          ||||||||||| |||||||||||  ||||||||||| ||||    
T  27585262 ttagtcccacatcggatagataggattcttgagaagagtttataaaaaggaggcactcctcaccgtacaagccggttttgtaaggatgagttaggtctcg 27585361  T
Q  91 atattcgttaca 102  Q
    ||||||||||||    
T  27585362 atattcgttaca 27585373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 34748784 - 34748891
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||          ||||||||||| |||||||||||  |||||||||| |||||    
T  34748784 ttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggcattcctcaccgtacaagccggttttgtaaggatgagttagacctcg 34748883  T
Q  91 atattcgt 98  Q
    ||||||||    
T  34748884 atattcgt 34748891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 36270568 - 36270457
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| |||||||||||| ||||||||||||||          ||||||||||| |||| ||||||  ||||||||||||||||    
T  36270568 ttagtcccacatcggatagataggattcttgagacgagtttataaagaggagacactcctcaccgtacaagccggctttgtaaggatgagttaggcctcg 36270469  T
Q  91 atattcgttaca 102  Q
    ||||||||||||    
T  36270468 atattcgttaca 36270457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 36495895 - 36496006
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| ||||||||||||| |||||||||||||          ||||||||||| |||||||||||  |||||||||||||||     
T  36495895 ttagtcccacatcggatagataggattcttgagaatagtttataaagaggaggcactcctcaccgtacaagccggttttgtagggatgagttaggcctct 36495994  T
Q  91 atattcgttaca 102  Q
    ||||||||||||    
T  36495995 atattcgttaca 36496006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 47346192 - 47346081
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    ||||||||||||  ||||||| ||| |||||||||||||||||||||||          ||||||||||| |||||||||||  ||||||||||||||||    
T  47346192 ttagtcccacatcagatagataggaatcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtacggatgagttaggcctcg 47346093  T
Q  91 atattcgttaca 102  Q
    ||||||||||||    
T  47346092 atattcgttaca 47346081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 47346421 - 47346310
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| ||| |||| ||| |||||||||||||||||||||||          ||||||||||| |||||||||||  ||||||||||||||||    
T  47346421 ttagtcccacatcggaaagataggaatcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtacggatgagttaggcctcg 47346322  T
Q  91 atattcgttaca 102  Q
    ||||||||||||    
T  47346321 atattcgttaca 47346310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 36495672 - 36495780
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| ||||||||||||| |||||||||||||          |||||||| || |||||||||||  ||||||||||||||||    
T  36495672 ttagtcccacatcggatagataggattcttgagaatagtttataaagaggaggcactcctcaccgtagaagccggttttgtagggatgagttaggcctcg 36495771  T
Q  91 atattcgtt 99  Q
    |||||||||    
T  36495772 atattcgtt 36495780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 34915018 - 34914907
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||  |||||||||||||||||||| |||||           ||||||||||| |||||||||||  ||||||||||||||||    
T  34915018 ttagtcccacatcggatagacaggattcttgagaagagtttacaaagatgaggcactcctcaccgtacaagccggttttgtagggatgagttaggcctcg 34914919  T
Q  91 atattcgttaca 102  Q
    ||||||||||||    
T  34914918 atattcgttaca 34914907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 37756262 - 37756158
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| ||| |||||||||||||||||||||||          ||||||||||| |||||||| ||| ||||||||||||||||    
T  37756262 ttagtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcactcttcaccgtacaagccggtttt-tatggatgagttaggcctcg 37756164  T
Q  91 atattc 96  Q
    ||||||    
T  37756163 atattc 37756158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 36270792 - 36270684
Alignment:
Q  4 gtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcgata 93  Q
    |||||||||||||||||| |||||||||| | ||||||||||||||          |||| |||||| |||||||||||  |||||||||||||||||||    
T  36270792 gtcccacattggatagataggattcttgacaggagtttataaagaggaggcactcctcactgtacaagccggttttgtaaggatgagttaggcctcgata 36270693  T
Q  94 ttcgttaca 102  Q
    || ||||||    
T  36270692 tttgttaca 36270684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 20296269 - 20296317
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  20296269 ttagtcccacattggatagagaggattcttgagaagagtttataaagag 20296317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 39550076 - 39550028
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||    
T  39550076 ttagtcccacatcggatagataggattcttgagaagagtttataaagag 39550028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 43384378 - 43384330
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||    
T  43384378 ttagtcccacatcggatagataggattcttgagaagagtttataaagag 43384330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 24240276 - 24240181
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagagtcaccgtacaatccggttttgtatagatgagttaggcctcgatattcgtta 100  Q
    |||||||||||| |||||||| ||| |||||||||||||||        ||||| ||||| |||||||||||  |||||||||||||||||||||| |||    
T  24240276 ttagtcccacatcggatagataggaatcttgagaagagtttcc------tcaccatacaagccggttttgtactgatgagttaggcctcgatattcatta 24240183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 37756036 - 37755932
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| ||| |||||||||||||||||||||||          ||||||||||| |||||||| ||| |||||||||||||||     
T  37756036 ttagtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcactcttcaccgtacaagccggtttt-tatggatgagttaggcctca 37755938  T
Q  91 atattc 96  Q
    ||||||    
T  37755937 atattc 37755932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 37762010 - 37761906
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| ||| |||||||||||||||||||||||          ||||||||||| |||||||| ||| |||||||||||||||     
T  37762010 ttagtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcactcttcaccgtacaagccggtttt-tatggatgagttaggcctca 37761912  T
Q  91 atattc 96  Q
    ||||||    
T  37761911 atattc 37761906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 36092490 - 36092442
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||||||||||||  ||||||||||||||||||||| ||||    
T  36092490 ttagtcccacattggatagatatgattcttgagaagagtttatagagag 36092442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 36092697 - 36092649
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| |||||||||||||||||||||| ||||    
T  36092697 ttagtcccacatcggatagataggattcttgagaagagtttatagagag 36092649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 37531021 - 37530973
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||| | |||||||| |||||||||||||||||||||||||||    
T  37531021 ttagtcccacgtcggatagataggattcttgagaagagtttataaagag 37530973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 24240488 - 24240393
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagagtcaccgtacaatccggttttgtatagatgagttaggcctcgatattcgtta 100  Q
    |||||||||||| |||||||| ||| |||| ||||||||||        ||||||||||| |||||||||||  |||||||||||||| ||| |||||||    
T  24240488 ttagtcccacatcggatagataggaatcttaagaagagtttcc------tcaccgtacaagccggttttgtacggatgagttaggccttgatgttcgtta 24240395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 7135341 - 7135245
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcc 87  Q
    |||||| ||||| |||||||| ||| |||||||||||||||||||||||          ||||| ||||| ||||||||||| ||||||||||||||    
T  7135341 ttagtcacacatcggatagataggactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaagatgagttaggcc 7135245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 257365 - 257317
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| ||||||||   |||||||||||||||||||||||||    
T  257365 ttagtcccacatcggatagatattattcttgagaagagtttataaagag 257317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19843713 - 19843761
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||| ||  ||||||| |||||||||||||||||||||||||||    
T  19843713 ttagtcccaaatcagatagataggattcttgagaagagtttataaagag 19843761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 22206376 - 22206328
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| | |||||| ||||||||||||| |||||||||||||    
T  22206376 ttagtcccacatcgaatagataggattcttgagaaaagtttataaagag 22206328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 22228363 - 22228411
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| | |||||| ||||||||||||| |||||||||||||    
T  22228363 ttagtcccacatcgaatagataggattcttgagaaaagtttataaagag 22228411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 40122037 - 40121989
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| | | |||||||||||||||||||||||    
T  40122037 ttagtcccacatcggatagatagtactcttgagaagagtttataaagag 40121989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 6813174 - 6813128
Alignment:
Q  3 agtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||| |||||||||||| ||||||  |||||||||||||||    
T  6813174 agtcccacatcggatagatgggactcttgatgagagtttataaagag 6813128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 14991593 - 14991559
Alignment:
Q  15 gatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||| |||||||||||||||||||||||||||    
T  14991593 gatagataggattcttgagaagagtttataaagag 14991559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 15421204 - 15421170
Alignment:
Q  15 gatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||| |||||||||||||||||||||||||||    
T  15421204 gatagataggattcttgagaagagtttataaagag 15421170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 33909371 - 33909417
Alignment:
Q  50 tcaccgtacaatccggttttgtatagatgagttaggcctcgatattc 96  Q
    |||| |||||| |||||||||||| ||||||||||||||| ||||||    
T  33909371 tcactgtacaagccggttttgtatggatgagttaggcctcaatattc 33909417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 36237810 - 36237856
Alignment:
Q  3 agtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||||||| || ||| |||||| ||||||||||||||||    
T  36237810 agtcccacattggatacataggactcttgataagagtttataaagag 36237856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 1663703 - 1663658
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaa 46  Q
    |||||||||||| |||||||| | | ||||||||||||||||||||    
T  1663703 ttagtcccacatcggatagatagcactcttgagaagagtttataaa 1663658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 27729513 - 27729460
Alignment:
Q  50 tcaccgtacaatccggttttgtatagatgagttaggcctcgatattcgttacac 103  Q
    ||||||||||| ||| |||||||  ||||||||||| |||||||||||| ||||    
T  27729513 tcaccgtacaagccgattttgtaaggatgagttaggtctcgatattcgtgacac 27729460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 1661289 - 1661241
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| ||||||||   | |||||||||||||||||||||||    
T  1661289 ttagtcccacatcggatagataaaactcttgagaagagtttataaagag 1661241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 22686827 - 22686783
Alignment:
Q  5 tcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||| ||||| || |||||||||| ||||||||||||||||    
T  22686827 tcccacatcggataaataggattcttgaaaagagtttataaagag 22686783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 28910038 - 28910086
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||  ||||||| ||| ||||| |||||||||||||||||    
T  28910038 ttagtcccacataagatagataggactcttgggaagagtttataaagag 28910086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 37272143 - 37272095
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| || ||||| ||| |||||| ||||||||||||||||    
T  37272143 ttagtcccacatcggttagataggactcttgataagagtttataaagag 37272095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 41670589 - 41670637
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| | |||||| | | |||||||||||||||||||||||    
T  41670589 ttagtcccacatcgaatagatagtactcttgagaagagtttataaagag 41670637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 43167991 - 43167943
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||| || |||||||| | | |||||||||||||||||||||||    
T  43167991 ttagtcccaaatcggatagatagcactcttgagaagagtttataaagag 43167943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 43384044 - 43383996
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| ||| |||||  ||||||||||||||||    
T  43384044 ttagtcccacatcggatagataggagtcttgcaaagagtttataaagag 43383996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 7e-24; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 17294984 - 17295095
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||          ||||||||||| |||||||||||  ||||||||||||||||    
T  17294984 ttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtagggatgagttaggcctcg 17295083  T
Q  91 atattcgttaca 102  Q
    ||||||||||||    
T  17295084 atattcgttaca 17295095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 29228454 - 29228565
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||| ||||||| |||||||| ||| |||||||||||||||||||||||          ||||||||||| |||||||||||  ||||||||||||||||    
T  29228454 ttagacccacatcggatagataggaatcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtagggatgagttaggcctcg 29228553  T
Q  91 atattcgttaca 102  Q
    ||||||||||||    
T  29228554 atattcgttaca 29228565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 12287854 - 12287965
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| |||||||||| ||||| ||||||||||          ||||||||||| | |||||||||  ||||||||||||||||    
T  12287854 ttagtcccacatcggatagataggattcttgaaaagaggttataaagaggaggcactcctcaccgtacaagctggttttgtaaggatgagttaggcctcg 12287953  T
Q  91 atattcgttaca 102  Q
    ||||||||||||    
T  12287954 atattcgttaca 12287965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 29228681 - 29228792
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| ||| |||||||||||||||||||||||          |||| |||||| |||| ||||||  ||||||||||||||||    
T  29228681 ttagtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcactcctcactgtacaagccggatttgtagggatgagttaggcctcg 29228780  T
Q  91 atattcgttaca 102  Q
    ||||||||||||    
T  29228781 atattcgttaca 29228792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 45858661 - 45858772
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||          |||||||||||  ||||||| ||  |||||||||||||||     
T  45858661 ttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcctcaccgtacaagtcggttttataaggatgagttaggcctca 45858760  T
Q  91 atattcgttaca 102  Q
    ||||||||||||    
T  45858761 atattcgttaca 45858772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 4187611 - 4187505
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaa--gag-------tcaccgtacaatccggttttgtatagatgagttaggcctcga 91  Q
    |||||||||||| |||||||| ||| |||||||||||||||||||   |||       ||||||||||| |||||||||||| ||||||||| |||||||    
T  4187611 ttagtcccacatcggatagataggaatcttgagaagagtttataagaggaggcactcctcaccgtacaagccggttttgtatggatgagttacgcctcga 4187512  T
Q  92 tattcgt 98  Q
    |||||||    
T  4187511 tattcgt 4187505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 28509485 - 28509437
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||    
T  28509485 ttagtcccacatcggatagataggattcttgagaagagtttataaagag 28509437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 33562225 - 33562114
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| |||||||||| ||||| ||||||||||          ||||||||||| ||||||||||   |||||||||||||| |    
T  33562225 ttagtcccacatcggatagataggattcttgaaaagaggttataaagaggaggcactcctcaccgtacaagccggttttgtggggatgagttaggccttg 33562126  T
Q  91 atattcgttaca 102  Q
    ||||||||||||    
T  33562125 atattcgttaca 33562114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 40642874 - 40642826
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||    
T  40642874 ttagtcccacatcggatagataggattcttgagaagagtttataaagag 40642826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 45443226 - 45443273
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaaga 48  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||    
T  45443226 ttagtcccacatcggatagataggattcttgagaagagtttataaaga 45443273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 51722259 - 51722361
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataa-agag----------tcaccgtacaatccggttttgtatagatgagttaggcctc 89  Q
    |||||||||||| |||||||| ||||||||||||||||||||||| ||||          ||||||||||| |||||||||||  |||||||||||||||    
T  51722259 ttagtcccacatcggatagataggattcttgagaagagtttataagagaggaggcactcctcaccgtacaagccggttttgtaaggatgagttaggcctc 51722358  T
Q  90 gat 92  Q
    |||    
T  51722359 gat 51722361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2697429 - 2697381
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| ||| |||||||||||||||||||||||    
T  2697429 ttagtcccacatcggatagataggactcttgagaagagtttataaagag 2697381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 4022223 - 4022175
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| ||| |||||||||||||||||||||||    
T  4022223 ttagtcccacatcggatagataggactcttgagaagagtttataaagag 4022175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 18585044 - 18585092
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| ||||||||||||||| |||||||||||    
T  18585044 ttagtcccacatcggatagataggattcttgagaagattttataaagag 18585092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 19937141 - 19937093
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| | |||||||||||||||||||||||||    
T  19937141 ttagtcccacatcggatagatagaattcttgagaagagtttataaagag 19937093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 27958145 - 27958097
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||| |||| ||||||| |||||||||||||||||||||||||||    
T  27958145 ttagtcccgcattagatagataggattcttgagaagagtttataaagag 27958097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 40521591 - 40521543
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| ||||||||  ||||||||||||||||||||||||||    
T  40521591 ttagtcccacatcggatagataagattcttgagaagagtttataaagag 40521543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 31411658 - 31411543
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatg----agttaggc 86  Q
    ||||||||||||  ||||||| |||||||||| ||||||||||||| ||          ||||||||||| |||||||||||| ||||    ||||||||    
T  31411658 ttagtcccacatcagatagataggattcttgaaaagagtttataaaaaggaggcacatctcaccgtacaagccggttttgtatggatggataagttaggc 31411559  T
Q  87 ctcgatattcgttaca 102  Q
    ||||||||||||||||    
T  31411558 ctcgatattcgttaca 31411543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 4187380 - 4187336
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataa 45  Q
    |||||||||||| |||||||| ||| |||||||||||||||||||    
T  4187380 ttagtcccacatcggatagataggaatcttgagaagagtttataa 4187336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 17419793 - 17419841
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| | | |||||||||||||||||||||||    
T  17419793 ttagtcccacatcggatagatagcactcttgagaagagtttataaagag 17419841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 27957907 - 27957859
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||| |||  ||||||||||||||||||||| |||||||||||||    
T  27957907 ttagtcccgcatctgatagatgggattcttgagaaaagtttataaagag 27957859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 30604558 - 30604510
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| ||| ||||||||| |||||||||||||    
T  30604558 ttagtcccacatcggatagataggaatcttgagaatagtttataaagag 30604510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 38474289 - 38474337
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||| |||| |||||||| |||||||||| ||||||||||||||||    
T  38474289 ttagtcctacatcggatagataggattcttgacaagagtttataaagag 38474337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 8520191 - 8520144
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaaga 48  Q
    |||||||||||| |||||||| | | ||||||||||||||||||||||    
T  8520191 ttagtcccacatcggatagatagcactcttgagaagagtttataaaga 8520144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29383721 - 29383675
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaag 47  Q
    |||||||||||| ||||||||  ||| ||||||||||||||||||||    
T  29383721 ttagtcccacatcggatagataagatacttgagaagagtttataaag 29383675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 39649180 - 39649134
Alignment:
Q  3 agtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||| ||||||||  || |||||||||||||||||||||||    
T  39649180 agtcccacatcggatagataagactcttgagaagagtttataaagag 39649134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 30604493 - 30604449
Alignment:
Q  56 tacaatccggttttgtatagatgagttaggcctcgatattcgtta 100  Q
    ||||| |||||||||||| ||||||||||| || |||||||||||    
T  30604493 tacaagccggttttgtatggatgagttaggtcttgatattcgtta 30604449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 31305717 - 31305765
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||  ||||||| | | |||||||||||||||||||||||    
T  31305717 ttagtcccacatccgatagatagcactcttgagaagagtttataaagag 31305765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 37600878 - 37600926
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||| ||||||||||||   | |||||||||||||||||||||||    
T  37600878 ttagtccctcattggatagataacactcttgagaagagtttataaagag 37600926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 46529021 - 46528914
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||||          ||||||||||| |||||||||||| ||||||||||||||||    
T  46529021 ttagtctcacatcggatagattggattcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtatggatgagttaggcctcg 46528922  T
Q  91 atattcgt 98  Q
    ||||||||    
T  46528921 atattcgt 46528914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 11290175 - 11290282
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| ||| |||||||||||||||||||||||          ||||||||||| |||||||||||| |||||||||||||||     
T  11290175 ttagtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcattcctcaccgtacaagccggttttgtatggatgagttaggcctca 11290274  T
Q  91 atattcgt 98  Q
    ||||||||    
T  11290275 atattcgt 11290282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 50868111 - 50868004
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| ||| |||||||||||||||||||||||          ||||||||||| |||||||||||| ||||||| |||||||     
T  50868111 ttagtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcattcctcaccgtacaagccggttttgtatggatgagtcaggcctca 50868012  T
Q  91 atattcgt 98  Q
    ||||||||    
T  50868011 atattcgt 50868004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 2016538 - 2016650
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||| |||||  ||||||| |||||||||||||||||||||||||||          |||||||| || ||| ||||||| || ||||||||||||||    
T  2016538 ttagtctcacatcagatagataggattcttgagaagagtttataaagaggaggcactcctcaccgtataagccgattttgtagagttgagttaggcctcg 2016637  T
Q  91 atattcgttacac 103  Q
    | |||||||||||    
T  2016638 acattcgttacac 2016650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4026079 - 4026124
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaa 46  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||    
T  4026079 ttagtcccacatcggatagataggattcttgagaagagtttataaa 4026124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 33912049 - 33912160
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| || ||||| |||| ||||||||||||||||||||||          |||| ||| || |||||||||||  ||||||||||||||||    
T  33912049 ttagtcccacatcgggtagataggatacttgagaagagtttataaagaggaggcactcctcactgtataagccggttttgtaaggatgagttaggcctcg 33912148  T
Q  91 atattcgttaca 102  Q
    ||||| ||||||    
T  33912149 atatttgttaca 33912160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 51469487 - 51469535
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| ||| |||||||||||||||||||||||    
T  51469487 ttagtcccacatcggatagataggactcttgagaagagtttataaagag 51469535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 13254389 - 13254436
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaaga 48  Q
    ||||||||||||||||||||| ||| | ||||||||||||||||||||    
T  13254389 ttagtcccacattggatagataggactattgagaagagtttataaaga 13254436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 37288967 - 37288922
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaa 46  Q
    |||||||||||| ||||||||  |||||||||||||||||||||||    
T  37288967 ttagtcccacatcggatagatatgattcttgagaagagtttataaa 37288922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 5427134 - 5427182
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||| ||||||||||||||||  |||| |||||||||||||||||||||    
T  5427134 ttagccccacattggatagataagatttttgagaagagtttataaagag 5427182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 15665159 - 15665207
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| ||| |||||||||||||||||| ||||    
T  15665159 ttagtcccacatcggatagataggactcttgagaagagtttatatagag 15665207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 22867090 - 22867138
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||| | |||||||| ||| |||||||||||||||||||||||    
T  22867090 ttagtcccacgtcggatagataggactcttgagaagagtttataaagag 22867138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 29669461 - 29669413
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| | | |||||||||||||||||||||||    
T  29669461 ttagtcccacatcggatagatagcactcttgagaagagtttataaagag 29669413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 37097829 - 37097781
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||  ||||||| ||||||||||||||| |||||||||||    
T  37097829 ttagtcccacatcagatagataggattcttgagaagattttataaagag 37097781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43972045 - 43972093
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||| |||||||||| ||| |||||||||||||| ||||||||    
T  43972045 ttagtcccacgttggatagataggactcttgagaagagttgataaagag 43972093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 51470489 - 51470533
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataa 45  Q
    |||||||||||| |||||||| ||| |||||||||||||||||||    
T  51470489 ttagtcccacatcggatagataggactcttgagaagagtttataa 51470533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 52810723 - 52810675
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||| |||| ||||||||  ||||||||||||||||||||||||||    
T  52810723 ttagtcctacatcggatagataagattcttgagaagagtttataaagag 52810675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 53740188 - 53740236
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| | | |||||||||||||||||||||||    
T  53740188 ttagtcccacatcggatagatagtactcttgagaagagtttataaagag 53740236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 33797203 - 33797160
Alignment:
Q  5 tcccacattggatagatgggattcttgagaagagtttataaaga 48  Q
    ||||||||||||||||| ||| |||||| |||||||||||||||    
T  33797203 tcccacattggatagataggactcttgataagagtttataaaga 33797160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 3055791 - 3055837
Alignment:
Q  3 agtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||||||||| ||| ||||||  |||||||||||||||    
T  3055791 agtcccacattggatagataggactcttgatgagagtttataaagag 3055837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 7198082 - 7198036
Alignment:
Q  3 agtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||||||||||  || |||||| ||||||||||||||||    
T  7198082 agtcccacattggatagataagactcttgataagagtttataaagag 7198036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43798225 - 43798183
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttat 43  Q
    |||||||||||| ||||| || |||||||||||||||||||||    
T  43798225 ttagtcccacatcggatatataggattcttgagaagagtttat 43798183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 43943681 - 43943727
Alignment:
Q  3 agtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||| ||||||||  || |||||||||||||||||||||||    
T  43943681 agtcccacatcggatagataagactcttgagaagagtttataaagag 43943727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 49544344 - 49544386
Alignment:
Q  7 ccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||| ||||||||  ||||||||||||||||||||||||||    
T  49544344 ccacatcggatagataagattcttgagaagagtttataaagag 49544386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 52827328 - 52827282
Alignment:
Q  3 agtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||| |||||||||||||| ||| |||||| ||||||||||||||||    
T  52827328 agtctcacattggatagataggactcttgataagagtttataaagag 52827282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 36558564 - 36558515
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagagt 50  Q
    |||||||||||| ||||||||  || | ||||||||||||||||||||||    
T  36558564 ttagtcccacatcggatagatatgacttttgagaagagtttataaagagt 36558515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 42901887 - 42901924
Alignment:
Q  65 gttttgtatagatgagttaggcctcgatattcgttaca 102  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  42901887 gttttgtatggatgagttagacctcgatattcgttaca 42901924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 47845794 - 47845839
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaa 46  Q
    |||||||||| | |||||||| || |||||||||||||||||||||    
T  47845794 ttagtcccacgtcggatagataggtttcttgagaagagtttataaa 47845839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 49380669 - 49380714
Alignment:
Q  4 gtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||| |||||||||||||  || |||||||||||||||||||||||    
T  49380669 gtcctacattggatagataagactcttgagaagagtttataaagag 49380714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 990553 - 990601
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| ||||||||   | |||||||||||||||||||||||    
T  990553 ttagtcccacatcggatagataacactcttgagaagagtttataaagag 990601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 29669776 - 29669728
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||  ||||||| | | |||||||||||||||||||||||    
T  29669776 ttagtcccacatcagatagatagcactcttgagaagagtttataaagag 29669728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43972361 - 43972409
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| ||| ||||||||| |||| ||||||||    
T  43972361 ttagtcccacatcggatagataggactcttgagaaaagttgataaagag 43972409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 45427034 - 45426986
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||| ||||||| |||||||| | | |||||||||||||||||||||||    
T  45427034 ttagccccacatcggatagatagtactcttgagaagagtttataaagag 45426986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 50858334 - 50858382
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||  ||||||| | | |||||||||||||||||||||||    
T  50858334 ttagtcccacatcagatagatagtactcttgagaagagtttataaagag 50858382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 53738306 - 53738258
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| | ||||||  || |||||||||||||||||||||||    
T  53738306 ttagtcccacatagaatagataagactcttgagaagagtttataaagag 53738258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 53739872 - 53739920
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||| || |||||||| | | |||||||||||||||||||||||    
T  53739872 ttagtcccatatcggatagatagtactcttgagaagagtttataaagag 53739920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 56509615 - 56509663
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||| |||| |||||||| |||  ||||||||||||||||||||||    
T  56509615 ttagtcctacatcggatagataggacccttgagaagagtttataaagag 56509663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 5095990 - 5095888
Alignment:
Q  5 tcccacattggatagatgggattcttgagaagagtttataaagag-----tcaccgtacaatccggttttgtatagatgagttaggcctcgatattcgtt 99  Q
    |||||||| |||||||| ||||| || ||||||||||||||||||     ||||| ||||| |||||||||||  |||||||||||||||||||||||||    
T  5095990 tcccacatcggatagataggattttttagaagagtttataaagaggatcctcaccctacaagccggttttgtagggatgagttaggcctcgatattcgtt 5095891  T
Q  100 aca 102  Q
    |||    
T  5095890 aca 5095888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 30329842 - 30329949
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||          |||||||||||  ||||||||||| ||| ||||||||||||    
T  30329842 ttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggaactcctcaccgtacaagtcggttttgtatggatcagttaggcctcg 30329941  T
Q  91 atattcgt 98  Q
    ||||||||    
T  30329942 atattcgt 30329949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 32395412 - 32395301
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| ||| |||||||||||||||||||||||          |||| |||||| |||||||||||| ||||||||| ||||||    
T  32395412 ttagtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcactcctcactgtacaagccggttttgtatggatgagttacgcctcg 32395313  T
Q  91 atattcgttaca 102  Q
    ||||||||||||    
T  32395312 atattcgttaca 32395301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 83908 - 83802
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag---------tcaccgtacaatccggttttgtatagatgagttaggcctcga 91  Q
    |||||||||||| ||||| || ||||||||||||| |||||||||||||         ||||||||||| |||||||||||| ||||||||||| |||||    
T  83908 ttagtcccacatcggatatataggattcttgagaaaagtttataaagaggaggcactctcaccgtacaagccggttttgtatggatgagttaggtctcga 83809  T
Q  92 tattcgt 98  Q
    |||||||    
T  83808 tattcgt 83802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 84132 - 84027
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| ||||| || |||||||||||||||||||||||||||          ||||||||||| |||||||||||| ||||||||||| ||||    
T  84132 ttagtcccacatcggatatataggattcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtatggatgagttaggtctcg 84033  T
Q  91 atattc 96  Q
    ||||||    
T  84032 atattc 84027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 2471791 - 2471680
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| || || |||||||||||||||||||||          ||||||||||| |||||||||||| ||||||||||| ||||    
T  2471791 ttagtcccacatcggatagatagggtttttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtatggatgagttaggtctcg 2471692  T
Q  91 atattcgttaca 102  Q
    |||||| |||||    
T  2471691 atattccttaca 2471680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 29396441 - 29396330
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    ||||||||||||  ||||||| ||| ||||||||| |||||||||||||          ||||||||||| |||||||||||  ||||||||||||||||    
T  29396441 ttagtcccacatcagatagataggaatcttgagaaaagtttataaagaggaggcactcctcaccgtacaagccggttttgtacggatgagttaggcctcg 29396342  T
Q  91 atattcgttaca 102  Q
    ||||||||||||    
T  29396341 atattcgttaca 29396330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 22196424 - 22196317
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| | | |||||||||||||||||||||||          |||||||| || |||||||||||  ||||||||||||||||    
T  22196424 ttagtcccacatcggatagatagtactcttgagaagagtttataaagaggaggcactcctcaccgtaaaagccggttttgtaaggatgagttaggcctcg 22196325  T
Q  91 atattcgt 98  Q
    ||||||||    
T  22196324 atattcgt 22196317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 38131770 - 38131818
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| ||| |||||||||||||||||||||||    
T  38131770 ttagtcccacatcggatagataggactcttgagaagagtttataaagag 38131818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 395375 - 395418
Alignment:
Q  3 agtcccacattggatagatgggattcttgagaagagtttataaa 46  Q
    ||||||||||||||||||| |||||||||| |||||||||||||    
T  395375 agtcccacattggatagataggattcttgataagagtttataaa 395418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 14769930 - 14769883
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaaga 48  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||||||    
T  14769930 ttagtctcacatcggatagataggattcttgagaagagtttataaaga 14769883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 30330067 - 30330180
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgta--tagatgagttaggcct 88  Q
    |||||||||||||| ||||||  |||||||||||||||| |||||||||          ||||||||||| ||||||||| |   | |||||||||||||    
T  30330067 ttagtcccacattgaatagatatgattcttgagaagagtatataaagaggaggcactcctcaccgtacaagccggttttgcaaggatatgagttaggcct 30330166  T
Q  89 cgatattcgttaca 102  Q
    ||||||||||||||    
T  30330167 cgatattcgttaca 30330180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 22196651 - 22196550
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| ||||||||  || |||||||||||||||||||||||          ||||||||||| |||||||||||  ||||||||||||| ||    
T  22196651 ttagtcccacatcggatagatatgactcttgagaagagtttataaagaggagacactcatcaccgtacaagccggttttgtaaggatgagttaggccccg 22196552  T
Q  91 at 92  Q
    ||    
T  22196551 at 22196550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 873794 - 873746
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| ||| |||||||||||||||||| ||||    
T  873794 ttagtcccacatcggatagataggactcttgagaagagtttatagagag 873746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 1028191 - 1028143
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| | | |||||||||||||||||||||||    
T  1028191 ttagtcccacatcggatagatagcactcttgagaagagtttataaagag 1028143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 9850483 - 9850527
Alignment:
Q  5 tcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||||||| |||||||||| ||||||||||| ||||    
T  9850483 tcccacattggatagataggattcttgataagagtttatatagag 9850527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19439866 - 19439914
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||  ||||||| ||||||||||||||| |||||||||||    
T  19439866 ttagtcccacatcagatagataggattcttgagaagaatttataaagag 19439914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 29432418 - 29432466
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||||| ||||| ||| |||||| ||||||||||||||||    
T  29432418 ttagtcccacattggttagataggactcttgataagagtttataaagag 29432466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 33040291 - 33040331
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagttt 41  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  33040291 ttagtcccacatcggatagataggattcttgagaagagttt 33040331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 37995732 - 37995684
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| | | |||||||||||||||||||||||    
T  37995732 ttagtcccacatcggatagatagcactcttgagaagagtttataaagag 37995684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 39668515 - 39668467
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| ||||||||  |||||||||||||| |||||||||||    
T  39668515 ttagtcccacatcggatagatatgattcttgagaagaatttataaagag 39668467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 27760081 - 27760128
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaaga 48  Q
    |||||||||||| |||||||| ||| ||||||||||||||| ||||||    
T  27760081 ttagtcccacatcggatagataggactcttgagaagagtttctaaaga 27760128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 24792161 - 24792111
Alignment:
Q  50 tcaccgtacaatccggttttgtatagatgagttaggcctcgatattcgtta 100  Q
    ||||||||||| |||||||||||   ||||||||| |||||||||||||||    
T  24792161 tcaccgtacaagccggttttgtaagaatgagttagacctcgatattcgtta 24792111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 30870977 - 30870935
Alignment:
Q  7 ccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||| ||||||||  ||||||||||||||||||||||||||    
T  30870977 ccacatcggatagataagattcttgagaagagtttataaagag 30870935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 33040476 - 33040518
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttat 43  Q
    ||||||||||||  ||||||| |||||||||||||||||||||    
T  33040476 ttagtcccacatcagatagataggattcttgagaagagtttat 33040518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 35527084 - 35527038
Alignment:
Q  3 agtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||| ||||||||  || |||||||||||||||||||||||    
T  35527084 agtcccacatcggatagataagactcttgagaagagtttataaagag 35527038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 38376739 - 38376785
Alignment:
Q  3 agtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||| ||||||||  || |||||||||||||||||||||||    
T  38376739 agtcccacatcggatagataagactcttgagaagagtttataaagag 38376785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 43490352 - 43490306
Alignment:
Q  3 agtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||| ||||||||  || |||||||||||||||||||||||    
T  43490352 agtcccacatcggatagataagactcttgagaagagtttataaagag 43490306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 3762915 - 3762960
Alignment:
Q  4 gtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||| ||||||||  || |||||||||||||||||||||||    
T  3762915 gtcccacatcggatagataagactcttgagaagagtttataaagag 3762960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 24792364 - 24792254
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaa--gag-------tcaccgtacaatccggttttgtatagatgagttaggcctcga 91  Q
    ||||||||| || |||||||| ||| |||||||||||||||||||   |||       ||||| ||||| ||||||||||   ||||| |||||||||||    
T  24792364 ttagtcccatatcggatagataggaatcttgagaagagtttataagaggaggcactcctcaccttacaaaccggttttgtggggatgatttaggcctcga 24792265  T
Q  92 tattcgttaca 102  Q
    |||||||||||    
T  24792264 tattcgttaca 24792254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 396266 - 396314
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||||| |||||| ||| |||||| |||| |||||||||||    
T  396266 ttagtcccacattgaatagataggactcttgataagactttataaagag 396314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 13843703 - 13843751
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||  ||||||| | | |||||||||||||||||||||||    
T  13843703 ttagtcccacatcagatagatagtactcttgagaagagtttataaagag 13843751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 13844019 - 13844067
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||  ||||||| | | |||||||||||||||||||||||    
T  13844019 ttagtcccacatctgatagatagtactcttgagaagagtttataaagag 13844067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 33040535 - 33040587
Alignment:
Q  50 tcaccgtacaatccggttttgtatagatgagttaggcctcgatattcgttaca 102  Q
    ||||| ||||| |||||||||||  ||| || |||||||||||||||||||||    
T  33040535 tcaccttacaagccggttttgtaaggataaggtaggcctcgatattcgttaca 33040587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 24453784 - 24453895
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| || ||||||||||||||||||||| ||          ||||||||||| |||||||||||| ||||||||||| ||||    
T  24453784 ttagtcccacatcggatagatagggttcttgagaagagtttataaacaggaggcactcctcaccgtacaagccggttttgtatggatgagttaggtctcg 24453883  T
Q  91 atattcgttaca 102  Q
    ||||||||||||    
T  24453884 atattcgttaca 24453895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 48511508 - 48511401
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| ||| |||||||||||||||||||||||          ||||||||||| |||||||||| |||||||||||||||||     
T  48511508 ttagtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcattcctcaccgtacaagccggttttgtctagatgagttaggcctca 48511409  T
Q  91 atattcgt 98  Q
    ||||||||    
T  48511408 atattcgt 48511401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 48511737 - 48511630
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| ||| |||||||||||||||||||||||          ||||||||||| |||||||||||| |||||||||||||||     
T  48511737 ttagtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtatggatgagttaggcctca 48511638  T
Q  91 atattcgt 98  Q
    ||||||||    
T  48511637 atattcgt 48511630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 10450746 - 10450639
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| || ||||||||||||||||||||||||          ||||||||||| ||||||||||   ||||||||||||||||    
T  10450746 ttagtcccacatcggatagataggtttcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtggggatgagttaggcctcg 10450647  T
Q  91 atattcgt 98  Q
    ||||||||    
T  10450646 atattcgt 10450639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 15820703 - 15820602
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| ||||||||||||||||||||||| |||          ||||||||||| |||||||||||  ||||||||||||||||    
T  15820703 ttagtcccacatcggatagataggattcttgagaagagtttataacgaggagacactcctcaccgtacaagccggttttgtagggatgagttaggcctcg 15820604  T
Q  91 at 92  Q
    ||    
T  15820603 at 15820602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 9180374 - 9180485
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| ||||||||||||| |||||||||||||          ||||||||||| | |||||||||  ||| ||||||||||||    
T  9180374 ttagtcccacatcggatagataggattcttgagaaaagtttataaagaggagacactcctcaccgtacaagctggttttgtaaggatcagttaggcctcg 9180473  T
Q  91 atattcgttaca 102  Q
    |||||| |||||    
T  9180474 atattcattaca 9180485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 11244639 - 11244536
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| || ||||||||||||||||||||||||          ||||||||||| |||||||||||  ||||||||||| ||||    
T  11244639 ttagtcccacatcggatagataggtttcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtaaggatgagttaggtctcg 11244540  T
Q  91 atat 94  Q
    ||||    
T  11244539 atat 11244536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 53966239 - 53966287
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||    
T  53966239 ttagtcccacatcggatagataggattcttgagaagagtttataaagag 53966287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 42190570 - 42190462
Alignment:
Q  5 tcccacattggatagatgggattcttgagaagagtttataaa--gag-------tcaccgtacaatccggttttgtatagatgagttaggcctcgatatt 95  Q
    |||||||| |||||||| ||| |||||||||||||||||||   |||       ||||||||||| ||| |||| ||| |||||||||||||||||||||    
T  42190570 tcccacatcggatagataggaatcttgagaagagtttataagaggaggcactcttcaccgtacaaaccgattttatatggatgagttaggcctcgatatt 42190471  T
Q  96 cgttacact 104  Q
    |||||||||    
T  42190470 cgttacact 42190462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 51734655 - 51734606
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagagt 50  Q
    |||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  51734655 ttagtcccacatcggatagataggattcttgagaagagtttataaggagt 51734606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 10450522 - 10450415
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| || |||||||||||||||||||| |||          ||||||||||| | ||||||||   ||||||||||||||||    
T  10450522 ttagtcccacatcggatagataggtttcttgagaagagtttataacgaggaggcactcctcaccgtacaagctggttttgtggggatgagttaggcctcg 10450423  T
Q  91 atattcgt 98  Q
    ||||||||    
T  10450422 atattcgt 10450415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13769389 - 13769341
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||||||||||| | | |||||||||||||||||||||||    
T  13769389 ttagtcccacattggatagatagcactcttgagaagagtttataaagag 13769341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 22666416 - 22666368
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||| | |||||||| |||||||||||||||||||||||||||    
T  22666416 ttagtcccacgtcggatagataggattcttgagaagagtttataaagag 22666368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 45443286 - 45443334
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||||||||||| | | |||||||||||||||||||||||    
T  45443286 ttagtcccacattggatagatagcactcttgagaagagtttataaagag 45443334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 54369045 - 54369093
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| ||| |||||||||||||||||||||||    
T  54369045 ttagtcccacatcggatagataggactcttgagaagagtttataaagag 54369093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 5321634 - 5321586
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| ||||| |||| ||||||||||||||||    
T  5321634 ttagtcccacatcggatagataggatttttgaaaagagtttataaagag 5321586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 9178913 - 9178961
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||| || |||||||| |||||||| ||||||||||||||||||    
T  9178913 ttagtcccatatcggatagataggattcttaagaagagtttataaagag 9178961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10453801 - 10453753
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||| || |||||||| |||||||||||||| ||||||||||||    
T  10453801 ttagtcccagatcggatagataggattcttgagaagggtttataaagag 10453753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10856724 - 10856676
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||| ||| |||||||||| ||||||||||||||||    
T  10856724 ttagtcccacatcggatggataggattcttgaaaagagtttataaagag 10856676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 16051574 - 16051522
Alignment:
Q  50 tcaccgtacaatccggttttgtatagatgagttaggcctcgatattcgttaca 102  Q
    ||||||||||| |||||||||||  ||||||||||| |||||||||| |||||    
T  16051574 tcaccgtacaagccggttttgtaaggatgagttaggtctcgatattcattaca 16051522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 27219335 - 27219383
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| | | |||||||||||||||||||||||    
T  27219335 ttagtcccacatcggatagatagcactcttgagaagagtttataaagag 27219383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 40769951 - 40769903
Alignment:
Q  50 tcaccgtacaatccggttttgtatagatgagttaggcctcgatattcgt 98  Q
    |||| |||||| |||||||||||| ||||||||||||||| ||||||||    
T  40769951 tcactgtacaagccggttttgtatggatgagttaggcctcaatattcgt 40769903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 41380730 - 41380778
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| | | |||||||||||||||||||||||    
T  41380730 ttagtcccacatcggatagatagcactcttgagaagagtttataaagag 41380778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 43101469 - 43101421
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||  ||||||| ||| |||||||||||||||||||||||    
T  43101469 ttagtcccacatcagatagataggactcttgagaagagtttataaagag 43101421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 44573332 - 44573380
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| | | |||||||||||||||||||||||    
T  44573332 ttagtcccacatcggatagatagtactcttgagaagagtttataaagag 44573380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 47833760 - 47833712
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| ||| |||||||||| ||||||||||||    
T  47833760 ttagtcccacatcggatagataggactcttgagaagtgtttataaagag 47833712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 102
Target Start/End: Original strand, 53966323 - 53966370
Alignment:
Q  55 gtacaatccggttttgtatagatgagttaggcctcgatattcgttaca 102  Q
    |||||| |||||||||||| ||||||||||||||| |||||| |||||    
T  53966323 gtacaagccggttttgtatggatgagttaggcctcaatattcattaca 53966370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 2800059 - 2800013
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaag 47  Q
    |||||||||||| |||||||| |||||||| ||| ||||||||||||    
T  2800059 ttagtcccacatcggatagataggattcttaagatgagtttataaag 2800013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 4029740 - 4029694
Alignment:
Q  3 agtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||| ||||||||  || |||||||||||||||||||||||    
T  4029740 agtcccacatcggatagataagactcttgagaagagtttataaagag 4029694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 10856659 - 10856617
Alignment:
Q  56 tacaatccggttttgtatagatgagttaggcctcgatattcgt 98  Q
    ||||| |||||||||||  ||||||||||||||||||||||||    
T  10856659 tacaagccggttttgtaaggatgagttaggcctcgatattcgt 10856617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 42258918 - 42258964
Alignment:
Q  3 agtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||| ||||||||  |||||||||||||||| |||||||||    
T  42258918 agtcccacatcggatagataagattcttgagaagagtatataaagag 42258964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 49477542 - 49477588
Alignment:
Q  3 agtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||| ||||||||  || |||||||||||||||||||||||    
T  49477542 agtcccacatcggatagataagactcttgagaagagtttataaagag 49477588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 54495539 - 54495585
Alignment:
Q  3 agtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||| ||||||||  || |||||||||||||||||||||||    
T  54495539 agtcccacatcggatagataagactcttgagaagagtttataaagag 54495585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 3985779 - 3985827
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| ||||||||  || | |||||||||||||||||||||    
T  3985779 ttagtcccacatcggatagatatgacttttgagaagagtttataaagag 3985827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 9179139 - 9179187
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||   ||||| ||||||||||||||||||||    
T  9179139 ttagtcccacatcggatagacatgattcatgagaagagtttataaagag 9179187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 16060924 - 16060872
Alignment:
Q  50 tcaccgtacaatccggttttgtatagatgagttaggcctcgatattcgttaca 102  Q
    ||||||||||| | |||||||||  ||||||||||| |||||||||| |||||    
T  16060924 tcaccgtacaagctggttttgtaaggatgagttaggtctcgatattcattaca 16060872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 34715553 - 34715505
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| | | | |||||||||||||||||||||    
T  34715553 ttagtcccacatcggatagatagcacttttgagaagagtttataaagag 34715505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 48685415 - 48685367
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| ||||| || | | |||||||||||||||||||||||    
T  48685415 ttagtcccacatcggatatatagtactcttgagaagagtttataaagag 48685367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 48837106 - 48837058
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| ||||| ||||||||||| |||| ||||    
T  48837106 ttagtcccacatcggatagataggattattgagaagagtatatatagag 48837058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 50203955 - 50203907
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||| ||||| ||||||||  || |||||||||||||||||||||||    
T  50203955 ttagtctcacatcggatagataagactcttgagaagagtttataaagag 50203907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 10862156 - 10862045
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||          ||||||||||| |||||||||||  |||||||||| ||||     
T  10862156 ttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcatcaccgtacaagccggttttgtaaggatgagttagacctcc 10862057  T
Q  91 atattcgttaca 102  Q
    ||||||||||||    
T  10862056 atattcgttaca 10862045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 936818 - 936923
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||| ||||| |||||||| ||| |||||||||||||||||||||||          ||||||||||| || ||||||||||||||||||||||||||    
T  936818 ttagtctcacatcggatagataggaatcttgagaagagtttataaagaggagacactcctcaccgtacaagccagttttgtatagatgagttaggcctcg 936917  T
Q  91 atattc 96  Q
    ||||||    
T  936918 atattc 936923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 15962255 - 15962144
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| ||| ||||||||| |||||||||||||          ||||||||||| |||||||||||  |||||||||||||||     
T  15962255 ttagtcccacatcggatagataggaatcttgagaatagtttataaagaggaggcactcctcaccgtacaagccggttttgtagggatgagttaggcctct 15962156  T
Q  91 atattcgttaca 102  Q
    ||||||||||||    
T  15962155 atattcgttaca 15962144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 39420703 - 39420814
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| ||| | |||||||||||||||||||||          |||| |||||| |||||||||||  ||||||||||||||||    
T  39420703 ttagtcccacatcggatagataggaattttgagaagagtttataaagaggaggcactcctcacagtacaagccggttttgtacggatgagttaggcctcg 39420802  T
Q  91 atattcgttaca 102  Q
    ||||||||||||    
T  39420803 atattcgttaca 39420814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 33532834 - 33532721
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||          ||||||||||| |||||||||||  | ||||||||| || |    
T  33532834 ttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtagggttgagttaggtcttg 33532735  T
Q  91 atattcgttacact 104  Q
    |||||||| |||||    
T  33532734 atattcgtgacact 33532721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 4506138 - 4506090
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||    
T  4506138 ttagtcccacatcggatagataggattcttgagaagagtttataaagag 4506090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 10862312 - 10862423
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| ||||||||  |||| || ||||||||||||||||||          ||||||||||| || |||||||| || ||||||||||||||    
T  10862312 ttagtcccacatcggatagataagattttttagaagagtttataaagaggagacactcatcaccgtacaagccagttttgtaaaggtgagttaggcctcg 10862411  T
Q  91 atattcgttaca 102  Q
    ||||||||||||    
T  10862412 atattcgttaca 10862423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 11350285 - 11350174
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    ||||||||| || |||||||| || ||||||||||||||||||||||||          |||||||| || |||||||||||| ||||||||||| || |    
T  11350285 ttagtcccatatcggatagataggtttcttgagaagagtttataaagaggaggcactcctcaccgtaaaagccggttttgtatggatgagttaggtcttg 11350186  T
Q  91 atattcgttaca 102  Q
    ||||||||||||    
T  11350185 atattcgttaca 11350174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14280286 - 14280334
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  14280286 ttagtcccacattggatagataggattcatgagaagagtttataaagag 14280334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 32810974 - 32810863
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||| ||| |||||||| |||||||||| ||||||||||||||||          ||||| ||||| ||||||||||   ||||||||||||||||    
T  32810974 ttagtcccgcatcggatagataggattcttgataagagtttataaagaggagacaatcatcaccttacaagccggttttgtggggatgagttaggcctcg 32810875  T
Q  91 atattcgttaca 102  Q
    ||||||||||||    
T  32810874 atattcgttaca 32810863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10861932 - 10861884
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||| |||||||| || |||||||||||||||||||||||||||    
T  10861932 ttagtcccatattggatatataggattcttgagaagagtttataaagag 10861884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 11349891 - 11349843
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| || ||||||||||||||||||||||||    
T  11349891 ttagtcccacatcggatagataggtttcttgagaagagtttataaagag 11349843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 15961839 - 15961787
Alignment:
Q  50 tcaccgtacaatccggttttgtatagatgagttaggcctcgatattcgttaca 102  Q
    ||||||||||| |||||||||||  ||||||||||||||| ||||||||||||    
T  15961839 tcaccgtacaagccggttttgtagggatgagttaggcctcaatattcgttaca 15961787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21213983 - 21213935
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||||||||||| | | |||||||||||||||||||||||    
T  21213983 ttagtcccacattggatagatagtactcttgagaagagtttataaagag 21213935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 17325176 - 17325281
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    ||||||||||||  ||||||| |||||||| |||||| |||||||||||          |||| |||||| |||||||||||  ||||||||||||||||    
T  17325176 ttagtcccacatctgatagataggattcttaagaagaatttataaagaggaggcactcttcactgtacaagccggttttgtaaggatgagttaggcctcg 17325275  T
Q  91 atattc 96  Q
    ||||||    
T  17325276 atattc 17325281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 26847338 - 26847292
Alignment:
Q  3 agtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||||||||| ||| |||||| ||||||||||||||||    
T  26847338 agtcccacattggatagataggactcttgataagagtttataaagag 26847292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28193433 - 28193388
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaa 46  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||||    
T  28193433 ttagtctcacatcggatagataggattcttgagaagagtttataaa 28193388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3976569 - 3976521
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| ||||||||   |||||||||||||||||||||||||    
T  3976569 ttagtcccacatcggatagataatattcttgagaagagtttataaagag 3976521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3977101 - 3977053
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| | | |||||||||||||||||||||||    
T  3977101 ttagtcccacatcggatagatagtactcttgagaagagtttataaagag 3977053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21214299 - 21214251
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||| ||||||| | | |||||||||||||||||||||||    
T  21214299 ttagtcccacattagatagatagcactcttgagaagagtttataaagag 21214251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 28193673 - 28193625
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||  ||||||| ||||||||||||||| |||||||||||    
T  28193673 ttagtcccacatcagatagataggattcttgagaagattttataaagag 28193625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43169248 - 43169296
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| | | |||||||||||||||||||||||    
T  43169248 ttagtcccacatcggatagatagtactcttgagaagagtttataaagag 43169296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 30166177 - 30166130
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaaga 48  Q
    |||||||||||| |||||||| | | ||||||||||||||||||||||    
T  30166177 ttagtcccacatcggatagatagcactcttgagaagagtttataaaga 30166130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 36161445 - 36161340
Alignment:
Q  1 ttagtcccacattggata-gatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctc 89  Q
    |||||||||||| ||||| ||| |||||||||||||||||||| ||||||          ||||||||||| |||||||||||  ||||||||||| |||    
T  36161445 ttagtcccacatcggataagataggattcttgagaagagttta-aaagaggaggcactcctcaccgtacaagccggttttgtagggatgagttaggtctc 36161347  T
Q  90 gatattc 96  Q
    |||||||    
T  36161346 gatattc 36161340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 883697 - 883651
Alignment:
Q  3 agtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||| ||||||||  || |||||||||||||||||||||||    
T  883697 agtcccacatcggatagataagactcttgagaagagtttataaagag 883651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 884065 - 884111
Alignment:
Q  3 agtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||| ||||||||| || ||||||||||||| |||||||||    
T  884065 agtcccacatcggatagatgagactcttgagaagagtatataaagag 884111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 6986512 - 6986466
Alignment:
Q  3 agtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||| ||||||||  || |||||||||||||||||||||||    
T  6986512 agtcccacatcggatagataagactcttgagaagagtttataaagag 6986466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 12419846 - 12419892
Alignment:
Q  3 agtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||| ||||||||  || |||||||||||||||||||||||    
T  12419846 agtcccacatcggatagataagactcttgagaagagtttataaagag 12419892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 12431906 - 12431952
Alignment:
Q  3 agtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||| ||||||||  || |||||||||||||||||||||||    
T  12431906 agtcccacatcggatagataagactcttgagaagagtttataaagag 12431952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 12432113 - 12432159
Alignment:
Q  3 agtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||| ||||||||  || |||||||||||||||||||||||    
T  12432113 agtcccacatcggatagataagaatcttgagaagagtttataaagag 12432159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 17727412 - 17727458
Alignment:
Q  3 agtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||| ||||||||  || |||||||||||||||||||||||    
T  17727412 agtcccacatcggatagataagactcttgagaagagtttataaagag 17727458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 14289143 - 14289180
Alignment:
Q  12 ttggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  14289143 ttggatagataagattcttgagaagagtttataaagag 14289180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 27545211 - 27545166
Alignment:
Q  4 gtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||| ||||||||  || |||||||||||||||||||||||    
T  27545211 gtcccacatcggatagataagactcttgagaagagtttataaagag 27545166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 3976253 - 3976209
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataa 45  Q
    |||||||||||| |||||||| | | |||||||||||||||||||    
T  3976253 ttagtcccacatcggatagatagtactcttgagaagagtttataa 3976209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 4342356 - 4342308
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| | ||||||||| |||||| ||||||||    
T  4342356 ttagtcccacatcggatagatagaattcttgaggagagttaataaagag 4342308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 6183460 - 6183416
Alignment:
Q  5 tcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||| |||||||| | | |||||||||||||||||||||||    
T  6183460 tcccacatcggatagatagtactcttgagaagagtttataaagag 6183416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 11969058 - 11969106
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||| | |||||||| | | |||||||||||||||||||||||    
T  11969058 ttagtcccacgtcggatagatagtactcttgagaagagtttataaagag 11969106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 18901962 - 18901914
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| ||||||||  || |||||| ||||||||||||||||    
T  18901962 ttagtcccacatcggatagataagactcttgaaaagagtttataaagag 18901914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25441702 - 25441750
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||  ||||||| | | |||||||||||||||||||||||    
T  25441702 ttagtcccacatcagatagatagtactcttgagaagagtttataaagag 25441750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43195790 - 43195838
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||  ||||||| | | |||||||||||||||||||||||    
T  43195790 ttagtcccacatcagatagatagtactcttgagaagagtttataaagag 43195838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 43688512 - 43688472
Alignment:
Q  8 cacattggatagatgggattcttgagaagagtttataaaga 48  Q
    ||||| |||||||| ||| ||||||||||||||||||||||    
T  43688512 cacatcggatagataggactcttgagaagagtttataaaga 43688472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 44266406 - 44266358
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||  |||||||  |||| |||||||||||||||||||||    
T  44266406 ttagtcccacatcagatagataagatttttgagaagagtttataaagag 44266358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 26842726 - 26842837
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||||||| |||||||| || ||||||||||||||||||||||||          ||||||||||| | ||||||||   ||||||||||||||||    
T  26842726 ttagtcccacatcggatagataggtttcttgagaagagtttataaagaggaggcactcctcaccgtacaagctggttttgtggggatgagttaggcctcg 26842825  T
Q  91 atattcgttaca 102  Q
    ||||||||||||    
T  26842826 atattcgttaca 26842837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 25184216 - 25184327
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||| ||| |||||||| |||||||||| ||||||||||||||||          ||||| ||||| ||||||||||   ||||||||||||||||    
T  25184216 ttagtcccgcatcggatagataggattcttgataagagtttataaagaggaagcaatcctcaccttacaagccggttttgtggggatgagttaggcctcg 25184315  T
Q  91 atattcgttaca 102  Q
    ||||||||||||    
T  25184316 atattcgttaca 25184327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 33396313 - 33396361
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||    
T  33396313 ttagtcccacatcggatagataggattcttgagaagagtttataaagag 33396361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 1744940 - 1744892
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||||||||||||| | | |||||| ||||||||||||||||    
T  1744940 ttagtcccacattggatagatagtactcttgaaaagagtttataaagag 1744892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 8144023 - 8144071
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| | | |||||||||||||||||||||||    
T  8144023 ttagtcccacatcggatagatagcactcttgagaagagtttataaagag 8144071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12134581 - 12134533
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| | | |||||||||||||||||||||||    
T  12134581 ttagtcccacatcggatagatagcactcttgagaagagtttataaagag 12134533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 19753702 - 19753654
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| | |||||| ||| |||||||||||||||||||||||    
T  19753702 ttagtcccacatggtatagataggactcttgagaagagtttataaagag 19753654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21067155 - 21067107
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||| || |||||||| | |||||||||||||||||||||||||    
T  21067155 ttagtcccatatcggatagatagcattcttgagaagagtttataaagag 21067107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21088946 - 21088898
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||| || |||||||| | |||||||||||||||||||||||||    
T  21088946 ttagtcccatatcggatagatagcattcttgagaagagtttataaagag 21088898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 25184009 - 25184120
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcctcg 90  Q
    |||||||| ||| ||||||||  ||||||||| ||||||||||||||||          ||||||||||| ||||||||||   ||| ||||||||||||    
T  25184009 ttagtcccgcatcggatagataagattcttgataagagtttataaagagaagacaatcctcaccgtacaagccggttttgtggggataagttaggcctcg 25184108  T
Q  91 atattcgttaca 102  Q
    ||||| ||||||    
T  25184109 atatttgttaca 25184120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 26339940 - 26339892
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| ||||||||  || |||||||||||||||||||||||    
T  26339940 ttagtcccacatcggatagataagaatcttgagaagagtttataaagag 26339892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 27443635 - 27443587
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||| ||||||  ||||||| |||||||||||||||||||||||||||    
T  27443635 ttagtaccacatcagatagataggattcttgagaagagtttataaagag 27443587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 30718746 - 30718798
Alignment:
Q  50 tcaccgtacaatccggttttgtatagatgagttaggcctcgatattcgttaca 102  Q
    ||||||||||| |||||||||| | ||||||||| | ||||||||||||||||    
T  30718746 tcaccgtacaagccggttttgtgtggatgagttaagtctcgatattcgttaca 30718798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 16194027 - 16194074
Alignment:
Q  2 tagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||||| ||||| || |||||||| ||||||||||||||||||    
T  16194027 tagtcccacatcggatatataggattctttagaagagtttataaagag 16194074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 24055207 - 24055160
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaaga 48  Q
    |||||||||||| |||||||| | | ||||||||||||||||||||||    
T  24055207 ttagtcccacatcggatagatagcactcttgagaagagtttataaaga 24055160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 33396537 - 33396579
Alignment:
Q  7 ccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||| |||||||| ||||| |||||||||||||||||||||    
T  33396537 ccacatcggatagataggatttttgagaagagtttataaagag 33396579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 8427615 - 8427667
Alignment:
Q  50 tcaccgtacaatccggttttgtatagatgagttaggcctcgatattcgttaca 102  Q
    |||||||||||  ||||||||||  | ||||||||||||||||||||| ||||    
T  8427615 tcaccgtacaagtcggttttgtaaggttgagttaggcctcgatattcgctaca 8427667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10733536 - 10733488
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||||||| ||||   | |||||||||||||||||||||||    
T  10733536 ttagtcccacattggacagataacactcttgagaagagtttataaagag 10733488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17096796 - 17096748
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||| ||||| | |||||| ||| |||||||||||||||||||||||    
T  17096796 ttagtctcacatcgaatagataggagtcttgagaagagtttataaagag 17096748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21043879 - 21043831
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||||| || |||||||| | | |||||||||||||||||||||||    
T  21043879 ttagtcccatatcggatagatagcactcttgagaagagtttataaagag 21043831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0785 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0785
Description:

Target: scaffold0785; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3218 - 3170
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    |||||||||||| |||||||| | ||| |||||||||||||||||||||    
T  3218 ttagtcccacatcggatagatagaatttttgagaagagtttataaagag 3170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 165790 - 165838
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||||| |||| |||||||| | |||||||||||||||||||||||||    
T  165790 ttagtcctacatcggatagatagaattcttgagaagagtttataaagag 165838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43726 - 43774
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaagag 49  Q
    ||||| ||||||  ||||||| |||||||||||||||||||||||||||    
T  43726 ttagtaccacatcagatagataggattcttgagaagagtttataaagag 43774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 76860 - 76954
Alignment:
Q  3 agtcccacattggatagatgggattcttgagaagagtttataaagag----------tcaccgtacaatccggttttgtatagatgagttaggcc 87  Q
    |||||||||| ||||||||  || |||||||||||||||||||||||          ||||| ||||| ||||||||||| ||||||||||||||    
T  76860 agtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaagatgagttaggcc 76954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 34544 - 34494
Alignment:
Q  50 tcaccgtacaatccggttttgtatagatgagttaggcctcgatattcgtta 100  Q
    ||||||||||| |||||||||||   ||||||||| |||||||||||||||    
T  34544 tcaccgtacaagccggttttgtaagaatgagttagacctcgatattcgtta 34494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 34747 - 34637
Alignment:
Q  1 ttagtcccacattggatagatgggattcttgagaagagtttataaa--gag-------tcaccgtacaatccggttttgtatagatgagttaggcctcga 91  Q
    ||||||||| || |||||||| ||| |||||||||||||||||||   |||       ||||| ||||| ||||||||||   ||||| |||||||||||    
T  34747 ttagtcccatatcggatagataggaatcttgagaagagtttataagaggaggcactcctcaccttacaaaccggttttgtggggatgatttaggcctcga 34648  T
Q  92 tattcgttaca 102  Q
    |||||||||||    
T  34647 tattcgttaca 34637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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