View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15039_high_22 (Length: 229)
Name: NF15039_high_22
Description: NF15039
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15039_high_22 |
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Alignment Details
Target: chr1 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 48953151 - 48953361
Alignment:
| Q |
1 |
aagttggtggatgagaacatgatcattcttagaatgcgaatccgtgagattgagatggtggaaacaaagactaaagatcattctgattggactgaatggg |
100 |
Q |
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| T |
48953151 |
aagttggtggatgagaacatgatcattcttagaatgcgaatccgtgagattgagatggtggaaacaaagactaaagatcattctgattggactgaatggg |
48953250 |
T |
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| Q |
101 |
agaagaagtattttgagaattatggttcggatgtatgtgatgcagttggattgttgcaaagaatgttgatgaacactagacctgccttggttgtgggcat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
48953251 |
agaagaagtattttgagaattatggttcggatgtatgtgatgcagttggattgttgcaaagaatgttgatgaacactagacctgccttggctgtgggcat |
48953350 |
T |
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| Q |
201 |
attagctctgt |
211 |
Q |
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||||||||||| |
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| T |
48953351 |
attagctctgt |
48953361 |
T |
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