View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1503R-Insertion-18 (Length: 1080)
Name: NF1503R-Insertion-18
Description: NF1503R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1503R-Insertion-18 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 787; Significance: 0; HSPs: 13)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 787; E-Value: 0
Query Start/End: Original strand, 8 - 974
Target Start/End: Complemental strand, 13379791 - 13378814
Alignment:
| Q |
8 |
agattcatcctgaatgatgatgtgtgatgtaaaatcctgaatannnnnnnnn--atggataatgataaagatcgagaagcattgttatagcgaaaatcac |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13379791 |
agattcatcctgaatgatgatgtgtgatgtaaaatcctgaatttttttttttttatggataatgataaagatcgagaagcattgttatagcgaaaatcac |
13379692 |
T |
|
| Q |
106 |
gattgacatatgatttattttaattggctccttgtatggtaagagggtgctgactagtggtaatgcaggtgctatttctgtcgtaatgctaattaacacg |
205 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||| |
|
|
| T |
13379691 |
gattgacatatgatttattttaattggctccttgtatggtaagagggtgctgactagtggtaatgcaggtgctatttgtggcataatgctaattaacacg |
13379592 |
T |
|
| Q |
206 |
agcacatcactcgcgagaaataacactgctctttttcattccttttcagggaaacaggggagaaggatgtggcattcaaagtactattctgcggtatatg |
305 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
13379591 |
agcacatcactcgcgagaaataacactgctctttttcattccttttcagggaaacaggggagaaggatgtggcattcaaagtactattttgcggtatatg |
13379492 |
T |
|
| Q |
306 |
tcactcggacctccatatggcgaagaatgagtggggcagtactacttacccagtagttcctgggtactctaacatcacaaaacaaaccannnnnnnnnnn |
405 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13379491 |
tcactcggacctccatatggcgaagaatgagtggggcagtactacttacccagtagttcctgggtactctaacatcacaaaacaaaccattttttatttt |
13379392 |
T |
|
| Q |
406 |
nnnnncaatgagttaaacattactccgttataaaacaaactaattttttgtttctttctcatctcatttgtgtaaagacatgaagttgctggtgaagtga |
505 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13379391 |
attttcaatgagttaaacattactctgttataaaacaaactaattttttgtttctttctcatctcatttgtgtaaagacatgaagttgctggtgaagtga |
13379292 |
T |
|
| Q |
506 |
cagaggtgggaagcaaggtgacaaacatcaaagttggagataaggttggtgtggggtgcatggttggatcctgccattcatgtcaaagttgtggcgagga |
605 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13379291 |
cagaggtgggaagcaaggtgaaaaacatcaaagttggagatagggttggtgtggggtgcatggttggatcctgccattcatgtcaaagttgtggcgagga |
13379192 |
T |
|
| Q |
606 |
tctcgaaaattactgctcaaagatgattcagacatacagttccaagaatgttgatggcactatcacatatggaggctactctgacaccatggttgtcgac |
705 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13379191 |
tctcgaaaattattgctcaaagatgattcagacatacagttccaagaatgttgatggcactatcacatatggaggctactctgacaccatggttgtcgac |
13379092 |
T |
|
| Q |
706 |
gaacactttattgtccgtattcccgatgccttatcacttgatgctgccgctcctctcctttgtgctgggatcacagtgtatagcccaatgaaacattttg |
805 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13379091 |
gaacactttattgtccgtattcccgatgccttatcacttgatgctgccgctcctctcctttgtgctgggatcacagtgtatagcccaatgaaacattttg |
13378992 |
T |
|
| Q |
806 |
gattagacaaacctggactgcatataggtgtggttggtcttggtggattaggtcatatggctgtgaagttcgccaaagcctttggtgttaaggtaactgt |
905 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13378991 |
gatttgacaaacctggactgcatataggtgtggttggtcttggtggattaggtcatatggctgtgaagttcgccaaagcctttggtgttaaggtaactgt |
13378892 |
T |
|
| Q |
906 |
ggt-agtacttct-ctaacaaaaagaag--agctat--gacgctta-gagctgactcattcgtg--tagtcgcgaaca |
974 |
Q |
| |
|
||| ||||||||| |||||||||||||| ||| || ||||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
13378891 |
ggtaagtacttctcctaacaaaaagaaggaagccattgaacgcttaggagctgactcattcgtggttagtcgcgaaca |
13378814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 476 - 931
Target Start/End: Complemental strand, 13373525 - 13373068
Alignment:
| Q |
476 |
tgtaaagacatgaagttgctggtgaagtgacagaggtgggaagcaaggtgacaaacatcaaagttggagataaggttggtgtggggtgcatggttggatc |
575 |
Q |
| |
|
||||||| ||||||||| |||||||||||||| |||| ||||||| ||||||||| ||||||||||||| ||||| ||||| ||||||||||||||||| |
|
|
| T |
13373525 |
tgtaaaggcatgaagtttctggtgaagtgacaaaggttggaagcatggtgacaaagttcaaagttggagacaaggtaggtgtagggtgcatggttggatc |
13373426 |
T |
|
| Q |
576 |
ctgccattcatgtcaaagttgtggcgaggatctcgaaaattactgctcaaagatgattcagacatacagttccaagaatgttgatggcactatcacatat |
675 |
Q |
| |
|
|||||| ||||||||||||||||| || |||||||| ||||| |||||||||||||| | ||||| | |||||||| ||||||| || ||||||||| |
|
|
| T |
13373425 |
ctgccactcatgtcaaagttgtggtgatgatctcgagaattattgctcaaagatgatcctcacatatggcgccaagaatattgatggaacaatcacatat |
13373326 |
T |
|
| Q |
676 |
ggaggctactctgacaccatggttgtcgacgaacactttattgtccgtattcccgatgccttatcacttgatgctgccgctcctctcctttgtgctggga |
775 |
Q |
| |
|
|||||||||||||| |||||||||| | |||||||||| | |||||||||| ||||||||| |||||||||| || |||||||| |||||||| |||| |
|
|
| T |
13373325 |
ggaggctactctgataccatggttgcccacgaacacttcgtgatccgtattcctgatgccttaccacttgatgccgctgctcctcttctttgtgcgggga |
13373226 |
T |
|
| Q |
776 |
tcacagtgtatagcccaatgaaacattttggattagacaaacctggactgcatataggtgtggttggtcttggtggattaggtcatatggctgtgaagtt |
875 |
Q |
| |
|
||||||| |||||||| ||||| |||||||| | |||| ||||| | ||| | ||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
13373225 |
tcacagtatatagccctttgaaatattttggacttaacaagcctggtttacatgtgggtgtggttggtcttggtggattaggtcatatggctgtgaaatt |
13373126 |
T |
|
| Q |
876 |
cgccaaagcctttggtgttaaggtaactgtggt-agtacttct-ctaacaaaaagaag |
931 |
Q |
| |
|
||||||| ||||||| ||| ||||| ||| | || |||||| |||||||||||||| |
|
|
| T |
13373125 |
taccaaagcttttggtgctaatgtaacagtgataagcacttctcctaacaaaaagaag |
13373068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 247 - 392
Target Start/End: Complemental strand, 13373738 - 13373592
Alignment:
| Q |
247 |
cttttcagggaaacaggggagaaggatgtggcattcaaagtactattctgcggtatatgtcactcggacctccatatggcgaagaatgagtggggcagta |
346 |
Q |
| |
|
|||||||||||||| || || || |||||||||||||||||||||| || ||||||||||| ||||| ||||| ||| |||||| |||||||| ||| |
|
|
| T |
13373738 |
cttttcagggaaacgggagaaaaagatgtggcattcaaagtactatattgtggtatatgtcattcggatctccacatgctgaagaacgagtggggtagtt |
13373639 |
T |
|
| Q |
347 |
ctacttacccagtagttcctgggtactc-taacatcacaaaacaaac |
392 |
Q |
| |
|
||| |||||| ||||||| |||||||| |||||||| ||||||||| |
|
|
| T |
13373638 |
ctatttaccctttagttcccgggtactcttaacatcataaaacaaac |
13373592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 657 - 872
Target Start/End: Complemental strand, 13419602 - 13419387
Alignment:
| Q |
657 |
tgatggcactatcacatatggaggctactctgacaccatggttgtcgacgaacactttattgtccgtattcccgatgccttatcacttgatgctgccgct |
756 |
Q |
| |
|
||||||||| ||||||||||||| ||||| ||| | ||||||| ||||| |||||| | | || ||||| ||| |||| | ||||||||||||| | |
|
|
| T |
13419602 |
tgatggcaccgtcacatatggaggttactccgactcaatggttgcagacgagcactttgtgattcgcattcctgatagcttacctcttgatgctgccggt |
13419503 |
T |
|
| Q |
757 |
cctctcctttgtgctgggatcacagtgtatagcccaatgaaacattttggattagacaaacctggactgcatataggtgtggttggtcttggtggattag |
856 |
Q |
| |
|
||||| ||||| ||||| |||||||||||||| || | |||||||| | | ||||| ||||| || |||||||||| ||||||||||||||| | | |
|
|
| T |
13419502 |
cctcttctttgcgctggaatcacagtgtatagtcctcttcgacattttgaactcgacaagcctggtatgaatataggtgttgttggtcttggtggacttg |
13419403 |
T |
|
| Q |
857 |
gtcatatggctgtgaa |
872 |
Q |
| |
|
| |||||||||||||| |
|
|
| T |
13419402 |
gccatatggctgtgaa |
13419387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 657 - 892
Target Start/End: Complemental strand, 13447153 - 13446918
Alignment:
| Q |
657 |
tgatggcactatcacatatggaggctactctgacaccatggttgtcgacgaacactttattgtccgtattcccgatgccttatcacttgatgctgccgct |
756 |
Q |
| |
|
||||||||||||||| |||||||| | ||| ||| | ||||||| ||||| |||||| | | || ||||| ||| |||| | ||||||| ||||| | |
|
|
| T |
13447153 |
tgatggcactatcacctatggaggtttctccgactcaatggttgcagacgagcactttgtgattcgcattcctgatagcttacctcttgatggtgccggt |
13447054 |
T |
|
| Q |
757 |
cctctcctttgtgctgggatcacagtgtatagcccaatgaaacattttggattagacaaacctggactgcatataggtgtggttggtcttggtggattag |
856 |
Q |
| |
|
||||| ||||| ||||| ||||||||||||| || | |||||||||| | ||||| ||||| || ||||||| || ||||||||||||||| | | |
|
|
| T |
13447053 |
cctcttctttgcgctggagtcacagtgtatagtcctcttcgacattttggactcgacaagcctggtatgaatataggagttgttggtcttggtggacttg |
13446954 |
T |
|
| Q |
857 |
gtcatatggctgtgaagttcgccaaagcctttggtg |
892 |
Q |
| |
|
|||||||||||||||| || || ||||| ||||||| |
|
|
| T |
13446953 |
gtcatatggctgtgaaatttgctaaagcttttggtg |
13446918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 740 - 892
Target Start/End: Original strand, 13385407 - 13385559
Alignment:
| Q |
740 |
cacttgatgctgccgctcctctcctttgtgctgggatcacagtgtatagcccaatgaaacattttggattagacaaacctggactgcatataggtgtggt |
839 |
Q |
| |
|
||||||| ||||| || ||||||||||||||||||||||| ||||| || || | | | | |||||| | ||||||||||| || ||| | ||||| || |
|
|
| T |
13385407 |
cacttgaagctgctgcacctctcctttgtgctgggatcactgtgtacagtcctcttagatactttggactcgacaaacctggtcttcatgtcggtgttgt |
13385506 |
T |
|
| Q |
840 |
tggtcttggtggattaggtcatatggctgtgaagttcgccaaagcctttggtg |
892 |
Q |
| |
|
|||||||||||| | ||||| ||||||||||| || |||||||| ||||||| |
|
|
| T |
13385507 |
tggtcttggtgggcttggtcacatggctgtgaaatttgccaaagcttttggtg |
13385559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 740 - 892
Target Start/End: Original strand, 13389228 - 13389380
Alignment:
| Q |
740 |
cacttgatgctgccgctcctctcctttgtgctgggatcacagtgtatagcccaatgaaacattttggattagacaaacctggactgcatataggtgtggt |
839 |
Q |
| |
|
||||||| ||||| || ||||||||||||||||||||||| ||||| || || | | | ||| |||| | || |||||||| || | ||||||||| || |
|
|
| T |
13389228 |
cacttgaagctgctgcacctctcctttgtgctgggatcactgtgtacagtcctcttagatattatggactcgataaacctggtcttcgtataggtgttgt |
13389327 |
T |
|
| Q |
840 |
tggtcttggtggattaggtcatatggctgtgaagttcgccaaagcctttggtg |
892 |
Q |
| |
|
|||||||||||| | ||||| ||||||||||| || |||||||| ||||||| |
|
|
| T |
13389328 |
tggtcttggtgggcttggtcacatggctgtgaaatttgccaaagcatttggtg |
13389380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 667 - 890
Target Start/End: Original strand, 13393562 - 13393785
Alignment:
| Q |
667 |
atcacatatggaggctactctgacaccatggttgtcgacgaacactttattgtccgtattcccgatgccttatcacttgatgctgccgctcctctccttt |
766 |
Q |
| |
|
|||||||||||||| ||||||||| | ||||||| || || |||||||| || | ||||| |||| |||| ||||||| |||| ||||||||||||| |
|
|
| T |
13393562 |
atcacatatggagggtactctgactcaatggttgcagatgagcactttatagttcacattcctgatggcttaccacttgaatctgctgctcctctccttt |
13393661 |
T |
|
| Q |
767 |
gtgctgggatcacagtgtatagcccaatgaaacattttggattagacaaacctggactgcatataggtgtggttggtcttggtggattaggtcatatggc |
866 |
Q |
| |
|
|||| || || || |||||||| || | | |||||||| | ||||| ||||| || |||||||| | ||||||||||||||| | ||||| ||| |
|
|
| T |
13393662 |
gtgccggtattactgtgtatagtcctcttcgatattttggactcgacaagcctggtatgaatataggtattgttggtcttggtggacttggtcacttggg |
13393761 |
T |
|
| Q |
867 |
tgtgaagttcgccaaagcctttgg |
890 |
Q |
| |
|
||||||||| || ||||| ||||| |
|
|
| T |
13393762 |
tgtgaagtttgcaaaagcttttgg |
13393785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 742 - 884
Target Start/End: Complemental strand, 13454021 - 13453879
Alignment:
| Q |
742 |
cttgatgctgccgctcctctcctttgtgctgggatcacagtgtatagcccaatgaaacattttggattagacaaacctggactgcatataggtgtggttg |
841 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||| || || ||||| || | |||||||||| | ||||| |||| || |||||||||| |||| |
|
|
| T |
13454021 |
cttgatgcagctgctcctctcctttgtgctgggataaccgtatatagtcctcttcgacattttggactcgacaagcctgatatgaatataggtgttgttg |
13453922 |
T |
|
| Q |
842 |
gtcttggtggattaggtcatatggctgtgaagttcgccaaagc |
884 |
Q |
| |
|
||||||||||| | || |||||||| ||||| ||||||||||| |
|
|
| T |
13453921 |
gtcttggtggacttggccatatggccgtgaaattcgccaaagc |
13453879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 742 - 902
Target Start/End: Complemental strand, 13426408 - 13426248
Alignment:
| Q |
742 |
cttgatgctgccgctcctctcctttgtgctgggatcacagtgtatagcccaatgaaacattttggattagacaaacctggactgcatataggtgtggttg |
841 |
Q |
| |
|
||||||| ||||| |||||| ||||| ||||| ||||||||||||| || | |||||| | | ||||| ||||| || ||||||| || |||| |
|
|
| T |
13426408 |
cttgatgttgccggtcctcttctttgcgctggagtcacagtgtatagtcctcttcgtcattttcaactcgacaagcctggtatgaatataggcgttgttg |
13426309 |
T |
|
| Q |
842 |
gtcttggtggattaggtcatatggctgtgaagttcgccaaagcctttggtgttaaggtaac |
902 |
Q |
| |
|
||||||||||| | ||||||||||||||||| ||||||||||| ||||||| ||| ||||| |
|
|
| T |
13426308 |
gtcttggtggacttggtcatatggctgtgaaattcgccaaagcttttggtgctaatgtaac |
13426248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 826 - 884
Target Start/End: Complemental strand, 13413088 - 13413030
Alignment:
| Q |
826 |
catataggtgtggttggtcttggtggattaggtcatatggctgtgaagttcgccaaagc |
884 |
Q |
| |
|
||||||||||| ||||||||||||||| | || |||||||||||||| || |||||||| |
|
|
| T |
13413088 |
catataggtgttgttggtcttggtggacttggccatatggctgtgaaatttgccaaagc |
13413030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 249 - 372
Target Start/End: Original strand, 13393151 - 13393274
Alignment:
| Q |
249 |
tttcagggaaacaggggagaaggatgtggcattcaaagtactattctgcggtatatgtcactcggacctccatatggcgaagaatgagtggggcagtact |
348 |
Q |
| |
|
|||||| ||||| || || || ||||||||||| |||||||| | || || |||||||||||||| || |||||| |||||||| ||||||| || |
|
|
| T |
13393151 |
tttcagagaaacgggtgaaaaagatgtggcatttaaagtactgtattgtgggatatgtcactcggatcttcatatgataaagaatgaatggggcatgtct |
13393250 |
T |
|
| Q |
349 |
acttacccagtagttcctgggtac |
372 |
Q |
| |
|
|| || ||| |||||||||||||| |
|
|
| T |
13393251 |
acctatccactagttcctgggtac |
13393274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 343
Target Start/End: Complemental strand, 13454427 - 13454385
Alignment:
| Q |
301 |
atatgtcactcggacctccatatggcgaagaatgagtggggca |
343 |
Q |
| |
|
||||||||||||||||| |||| |||||||||||| ||||||| |
|
|
| T |
13454427 |
atatgtcactcggaccttcataaggcgaagaatgaatggggca |
13454385 |
T |
|
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Target: chr8 (Bit Score: 119; Significance: 3e-60; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 496 - 931
Target Start/End: Original strand, 28430367 - 28430804
Alignment:
| Q |
496 |
ggtgaagtgacagaggtgggaagcaaggtgacaaacat-caaagttggagataaggttggtgtggggtgcatggttggatcctgccattcatgtcaaagt |
594 |
Q |
| |
|
|||||||| |||||||||||| |||||| ||||| || |||||||||||| ||||| ||||| |||||||||||| ||||||||| ||||| |||| | |
|
|
| T |
28430367 |
ggtgaagtaacagaggtgggagacaaggt-acaaaaattcaaagttggagacaaggtaggtgttgggtgcatggttcaatcctgccactcatgccaaaat |
28430465 |
T |
|
| Q |
595 |
tgtggcgaggatctcgaaaattactgctcaaagatgattcagacatacagttccaagaatgttgatggcactatcacatatggaggctactctgacacca |
694 |
Q |
| |
|
|| ||| ||||||||||||||| |||| |||||| |||||| ||||||||||| |||||||||| |||||||||||||||||||| ||||| | |
|
|
| T |
28430466 |
tgcaacgaaagtctcgaaaattactgtccaaaagtgattctcacatacggttccaagaatcttgatggcaccatcacatatggaggctactccgacacaa |
28430565 |
T |
|
| Q |
695 |
tggttgtcgacgaacactttattgtccgtattcccgatgccttatcacttgatgctgccgctcctctcctttgtgctgggatcacagtgtatagcccaat |
794 |
Q |
| |
|
|||| ||||||| |||| | || | ||||| || | || | ||||||||||| ||||||||||| || || |||||||| ||||||||||| | |
|
|
| T |
28430566 |
tggtcaccgacgaaagctttgtgatcagcattccaaatagcctacctcttgatgctgcagctcctctcctctgcgccgggatcacggtgtatagcccttt |
28430665 |
T |
|
| Q |
795 |
gaaacattttggattagacaaacctggactgcatataggtgtggttggtcttggtggattaggtcatatggctgtgaagttcgccaaagcctttggtgtt |
894 |
Q |
| |
|
|||| |||||||| | || |||||| |||| ||||||||||||||||||||||| | ||||||||||||||||| || |||||||| ||||||| | |
|
|
| T |
28430666 |
gaaatattttggacttgataaacctaacttgcaattaggtgtggttggtcttggtggacttggtcatatggctgtgaaatttgccaaagcttttggtgct |
28430765 |
T |
|
| Q |
895 |
aaggtaactgtg-gtagtacttct-ctaacaaaaagaag |
931 |
Q |
| |
|
|||||||| ||| ||| |||||| |||||||||||||| |
|
|
| T |
28430766 |
aaggtaacagtgattagcacttctcctaacaaaaagaag |
28430804 |
T |
|
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Target: chr4 (Bit Score: 62; Significance: 3e-26; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 657 - 890
Target Start/End: Complemental strand, 47601424 - 47601191
Alignment:
| Q |
657 |
tgatggcactatcacatatggaggctactctgacaccatggttgtcgacgaacactttattgtccgtattcccgatgccttatcacttgatgctgccgct |
756 |
Q |
| |
|
||||||||| | |||||| ||||| ||||||||| | |||||||| ||||| |||||| | || | |||||||||| || ||||||| ||| | ||| |
|
|
| T |
47601424 |
tgatggcaccaccacatacggaggttactctgactcaatggttgtagacgagcactttgtggttcacattcccgatggtttgccacttgaagctactgct |
47601325 |
T |
|
| Q |
757 |
cctctcctttgtgctgggatcacagtgtatagcccaatgaaacattttggattagacaaacctggactgcatataggtgtggttggtcttggtggattag |
856 |
Q |
| |
|
||||| |||||||| || |||||||||||||| || | | |||||||| | || |||||||| ||||||||||||| ||||||||||||||| | | |
|
|
| T |
47601324 |
cctcttctttgtgccggtatcacagtgtatagtcctcttcgatattttggactcgataaacctggtatgcatataggtgttgttggtcttggtggacttg |
47601225 |
T |
|
| Q |
857 |
gtcatatggctgtgaagttcgccaaagcctttgg |
890 |
Q |
| |
|
|||| |||||||| ||||| || ||||| ||||| |
|
|
| T |
47601224 |
gtcacatggctgttaagtttgctaaagcttttgg |
47601191 |
T |
|
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