View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1503R-Insertion-6 (Length: 158)
Name: NF1503R-Insertion-6
Description: NF1503R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1503R-Insertion-6 |
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Alignment Details
Target: chr1 (Bit Score: 86; Significance: 2e-41; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 22861646 - 22861506
Alignment:
| Q |
8 |
agggtgaccgtcaaacaaagcaaagcctcaaattca----------ctccaaaatccctaagttgaatcaaccatttgaaaaataaaggcaatggccagg |
97 |
Q |
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| T |
22861646 |
agggtgatcgtcaaacaaagcaaagcctcaaattcattcgaattcactcgaaaatccctaagttgaatcaaccatttgaaaaacaaaggcaatcgccagg |
22861547 |
T |
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| Q |
98 |
cggcaaaggggaggagtcgtgaacgtccacctcttagggag |
138 |
Q |
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| T |
22861546 |
cggcaaagggtaggagtcgtgaacgtccacctcttagggag |
22861506 |
T |
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