View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1503_low_27 (Length: 276)
Name: NF1503_low_27
Description: NF1503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1503_low_27 |
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Alignment Details
Target: chr2 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 17 - 270
Target Start/End: Original strand, 2425532 - 2425785
Alignment:
| Q |
17 |
agatgtacctccatggctgctgcattgcatattagaagagtgcaaagtaatagatgttgattttttacaaccggtaatattttctctgtcaccacaaaaa |
116 |
Q |
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| T |
2425532 |
agatgtacctccatggctgctgcattgcatattagaagagtgcaaagtaatagatgttgattttttacaaccggtaatattttctctgtcaccacaaaaa |
2425631 |
T |
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| Q |
117 |
ataataacacaaagttcacatagataattgagtatacattcgtaatcacggtgaatttgacaaaatcatcgtaacatcaagaatttctggataaaacagt |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
2425632 |
ataataacacaaagttcacatagataattgagtatacattcgtaatcacggtgaatttgacaaaatcatcgtaacatcaagaatttctggatagaacagt |
2425731 |
T |
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| Q |
217 |
accagcatgttttcgatcttgaggtgttccagatttagcaagaacctcaagatc |
270 |
Q |
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| T |
2425732 |
accagcatgttttcgatcttgaggtgttccagatttagcaagaacctcaagatc |
2425785 |
T |
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