View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1504-Insertion-21 (Length: 326)
Name: NF1504-Insertion-21
Description: NF1504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1504-Insertion-21 |
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Alignment Details
Target: chr6 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 7 - 263
Target Start/End: Complemental strand, 16420872 - 16420614
Alignment:
| Q |
7 |
acataagaatgttaatttttaccatcctagtagtttatttggttttgtccttatacacacacatagatgtaccaatatgatggccatgctaaaatatgat |
106 |
Q |
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| T |
16420872 |
acataagagtgttaatttttaccatcctagtagtttgtttggttttgtccttatacacacacataggtgtaccagtatgatggtcatgctaaaacatgat |
16420773 |
T |
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| Q |
107 |
atgataactctat--catattcatatatttcgtttgatacacttgacaagatactttcaacctattattaattctattctggtttgtctttgtattcatg |
204 |
Q |
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| T |
16420772 |
atgataactctatatcatattcatatatttcgtttgatacacttgacaagatactttcaacctattattaattctatcctgatttgtctttgtattcatg |
16420673 |
T |
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| Q |
205 |
agtataagttgggttagaaatatcttatcatgattaaaaactcatttcttatcttttca |
263 |
Q |
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| T |
16420672 |
agtataagttgggttagaaatatcttatcatgattagaaactcatttcttatcttttca |
16420614 |
T |
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