View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1504-Insertion-34 (Length: 120)
Name: NF1504-Insertion-34
Description: NF1504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1504-Insertion-34 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 105; Significance: 7e-53; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 105; E-Value: 7e-53
Query Start/End: Original strand, 8 - 120
Target Start/End: Original strand, 6652017 - 6652129
Alignment:
| Q |
8 |
ctatgaagcactgacacggacactagatatgacacaaaagcatcaacacacgtgacatcggatacgccatcaatctgaagtatcattcagcttcatagca |
107 |
Q |
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| T |
6652017 |
ctatgaagcactgacacagacactagatatgacacaaaagcatcaacacatgtgacatcggatacgccatcaatctgaagtatcattcagcttcatagca |
6652116 |
T |
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| Q |
108 |
ttgcttggcttaa |
120 |
Q |
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||||||||||||| |
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| T |
6652117 |
ttgcttggcttaa |
6652129 |
T |
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