View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15041_high_5 (Length: 238)
Name: NF15041_high_5
Description: NF15041
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15041_high_5 |
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Alignment Details
Target: chr1 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 70 - 222
Target Start/End: Complemental strand, 48037280 - 48037128
Alignment:
| Q |
70 |
cactttcttgacatcgaaactgataacttgtgatttgatcctttgatccgatatgctgctttgcatctaaggattgtaaattatgctgtgagatacatgt |
169 |
Q |
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| T |
48037280 |
cactttcttgacatcgaaactgataacttgtgatttgatcctttgatccgatatgctgctttgcatctaaggattgtaaattatgctgtgagatacatgt |
48037181 |
T |
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| Q |
170 |
acaatggacttgaataaaaaactgtttatacatacgtcttaaaaatagatatt |
222 |
Q |
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| T |
48037180 |
acaatggacttgaataaaaaactgtttatacatacgtcttaaaaatagatatt |
48037128 |
T |
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