View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15041_low_3 (Length: 252)

Name: NF15041_low_3
Description: NF15041
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15041_low_3
NF15041_low_3
[»] chr4 (16 HSPs)
chr4 (13-252)||(7889547-7889786)
chr4 (17-252)||(6625721-6625956)
chr4 (23-252)||(6793361-6793590)
chr4 (68-223)||(10034800-10034955)
chr4 (17-203)||(6592139-6592325)
chr4 (17-203)||(6716416-6716602)
chr4 (14-148)||(21227141-21227275)
chr4 (17-252)||(6770430-6770665)
chr4 (17-232)||(6833306-6833521)
chr4 (13-252)||(6749855-6750094)
chr4 (14-252)||(6536928-6537166)
chr4 (14-252)||(6549253-6549491)
chr4 (64-252)||(6648106-6648294)
chr4 (17-106)||(6667143-6667232)
chr4 (17-200)||(6501267-6501450)
chr4 (14-106)||(6812731-6812820)
[»] chr7 (5 HSPs)
chr7 (13-201)||(18925459-18925647)
chr7 (13-252)||(34734206-34734445)
chr7 (13-252)||(34729642-34729881)
chr7 (16-202)||(34719791-34719977)
chr7 (22-109)||(34715121-34715208)
[»] scaffold0813 (1 HSPs)
scaffold0813 (130-203)||(2074-2147)
[»] scaffold0373 (1 HSPs)
scaffold0373 (60-106)||(12814-12860)
[»] scaffold0552 (1 HSPs)
scaffold0552 (14-106)||(203-292)


Alignment Details
Target: chr4 (Bit Score: 228; Significance: 1e-126; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 13 - 252
Target Start/End: Complemental strand, 7889786 - 7889547
Alignment:
Q  13 aaaattcatttcacatctctatttctctcttcaaaattccgggctttatgttttcaaagacgatgatgggattcaacgaggagatcagatctcagtcgca 112  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7889786 aaaattcatttcacatctatatatctctcttcaaaattccgggctttatgttttcaaagacgatgatgggattcaacgaggagatcagatctcagtcgca 7889687  T
Q  113 ctaatccaagctgtcggacagtctaaaatttctattgttgttctgtctacaaactttgctaattcaaaatggtgtatgacagagttggagagaattgtgg 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7889686 ctaatccaagctgtcggacagtctaaaatttctattgttgttctgtctaaaaactttgctaattcaaaatggtgtatgacagagttggagagaattgtgg 7889587  T
Q  213 aaatcagtagaaccaagggtatggtgcttgtgccagtgtt 252  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  7889586 aaatcagtagaaccaagggtatggtgcttgtgccagtgtt 7889547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 252
Target Start/End: Complemental strand, 6625956 - 6625721
Alignment:
Q  17 ttcatttcacatctctatttctctcttcaaaattccgggctttatgttttcaaagacgatgatgggattcaacgaggagatcagatctcagtcgcactaa 116  Q
    |||||||||||||||||||  |||||||||||| ||||| ||||||||||||||||||| ||||  ||||||||||| |||||||||||| |  |||||     
T  6625956 ttcatttcacatctctattcatctcttcaaaatgccgggatttatgttttcaaagacgacgatgaaattcaacgaggcgatcagatctcaatttcactat 6625857  T
Q  117 tccaagctgtcggacagtctaaaatttctattgttgttctgtctacaaactttgctaattcaaaatggtgtatgacagagttggagagaattgtggaaat 216  Q
    | | |||  ||||||| |||| ||||| |||||| ||| | |||||||||| ||||||||||| ||||||||||  |||||||||||  ||  |||||||    
T  6625856 tgcgagcaatcggacactctagaatttttattgtggttttatctacaaactatgctaattcaagatggtgtatgctagagttggagaagataatggaaat 6625757  T
Q  217 cagtagaaccaagggtatggtgcttgtgccagtgtt 252  Q
      | ||||||  |||| ||||| |||| ||||||||    
T  6625756 tggcagaaccgggggtctggtggttgtaccagtgtt 6625721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 23 - 252
Target Start/End: Original strand, 6793361 - 6793590
Alignment:
Q  23 tcacatctctatttctctcttcaaaattccgggctttatgttttcaaagacgatgatgggattcaacgaggagatcagatctcagtcgcactaatccaag 122  Q
    ||||||||||||| ||| ||||||||| | ||| || ||||||||||||||||||||| |||||||||||||||||| |||||| || ||||  | | ||    
T  6793361 tcacatctctattcctcccttcaaaatgcagggattcatgttttcaaagacgatgatgagattcaacgaggagatcatatctcaatctcactgttgcgag 6793460  T
Q  123 ctgtcggacagtctaaaatttctattgttgttctgtctacaaactttgctaattcaaaatggtgtatgacagagttggagagaattgtggaaatcagtag 222  Q
    |  | |||||||||| |||||||||||||||  |||||||||| |  || ||||||| ||||||||||  |||||||||||  ||  |||||||  | ||    
T  6793461 caattggacagtctagaatttctattgttgtgttgtctacaaattacgccaattcaagatggtgtatgctagagttggagaagataatggaaattggcag 6793560  T
Q  223 aaccaagggtatggtgcttgtgccagtgtt 252  Q
    || || |||| ||||  |||||||||||||    
T  6793561 aaacaggggtctggttgttgtgccagtgtt 6793590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 68 - 223
Target Start/End: Original strand, 10034800 - 10034955
Alignment:
Q  68 aaagacgatgatgggattcaacgaggagatcagatctcagtcgcactaatccaagctgtcggacagtctaaaatttctattgttgttctgtctacaaact 167  Q
    ||||||||||| ||||||||||| |||||| ||||||||||| || |  | |||||  | || ||||||| |||||||||||||||  |||||| ||| |    
T  10034800 aaagacgatgacgggattcaacgtggagataagatctcagtctcattgttacaagcaattggtcagtctagaatttctattgttgtattgtctagaaatt 10034899  T
Q  168 ttgctaattcaaaatggtgtatgacagagttggagagaattgtggaaatcagtaga 223  Q
    |||||||||||||||||||||||   |||||||||||||||||||||||| |||||    
T  10034900 ttgctaattcaaaatggtgtatgcttgagttggagagaattgtggaaatcggtaga 10034955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 203
Target Start/End: Complemental strand, 6592325 - 6592139
Alignment:
Q  17 ttcatttcacatctctatttctctcttcaaaattccgggctttatgttttcaaagacgatgatgggattcaacgaggagatcagatctcagtcgcactaa 116  Q
    ||||| ||||||||||||| ||||||||||||| | ||| |||||||||||| ||||||||| | |||||||||||||||||| |||||| || ||||      
T  6592325 ttcatgtcacatctctattcctctcttcaaaatgcggggatttatgttttcagagacgatgacgagattcaacgaggagatcatatctcaatctcactgt 6592226  T
Q  117 tccaagctgtcggacagtctaaaatttctattgttgttctgtctacaaactttgctaattcaaaatggtgtatgacagagttggaga 203  Q
    | | |||  | | |||||||| || || ||| |||||| |||||||||| | ||||||||||| ||||||||||  |||||||||||    
T  6592225 tgcgagcaattgaacagtctagaacttgtatcgttgttttgtctacaaattatgctaattcaagatggtgtatgctagagttggaga 6592139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 17 - 203
Target Start/End: Original strand, 6716416 - 6716602
Alignment:
Q  17 ttcatttcacatctctatttctctcttcaaaattccgggctttatgttttcaaagacgatgatgggattcaacgaggagatcagatctcagtcgcactaa 116  Q
    ||||| ||||||||| ||| ||||||||| | | | ||| |||||| |||||||||||| ||||||||||||||||||||||| ||||| ||| ||||      
T  6716416 ttcatatcacatctccattcctctcttcacagtgcagggatttatgctttcaaagacgacgatgggattcaacgaggagatcaaatctcggtctcactgg 6716515  T
Q  117 tccaagctgtcggacagtctaaaatttctattgttgttctgtctacaaactttgctaattcaaaatggtgtatgacagagttggaga 203  Q
       ||||  | | |||||||| ||||||||| |||||| |||||||||| | ||||||||||| ||||||||||  |||||||||||    
T  6716516 ggaaagcaattgaacagtctagaatttctatcgttgttttgtctacaaattatgctaattcaagatggtgtatgttagagttggaga 6716602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 21227141 - 21227275
Alignment:
Q  14 aaattcatttcacatctctatttctctcttcaaaattccgggctttatgttttcaaagacgatgatgggattcaacgaggagatcagatctcagtcgcac 113  Q
    |||||||||||||||||| ||| |||||||| |||| | ||| ||||||||||||||||||| ||||||||  ||||||||||||||||||||| | |||    
T  21227141 aaattcatttcacatctcaattcctctcttcgaaatgctgggatttatgttttcaaagacgacgatgggatagaacgaggagatcagatctcaggctcac 21227240  T
Q  114 taatccaagctgtcggacagtctaaaatttctatt 148  Q
    |  | |||||  |||||||||||| ||||||||||    
T  21227241 tcttgcaagcaatcggacagtctagaatttctatt 21227275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 252
Target Start/End: Original strand, 6770430 - 6770665
Alignment:
Q  17 ttcatttcacatctctatttctctcttcaaaattccgggctttatgttttcaaagacgatgatgggattcaacgaggagatcagatctcagtcgcactaa 116  Q
    ||||||||||||||||||| ||||||||||||||| |   ||| || ||| | ||||||||||| | ||||||||||||| || || ||| |||||||      
T  6770430 ttcatttcacatctctattcctctcttcaaaattcagctatttttgcttttagagacgatgatgagcttcaacgaggagagcatatatcaatcgcactgt 6770529  T
Q  117 tccaagctgtcggacagtctaaaatttctattgttgttctgtctacaaactttgctaattcaaaatggtgtatgacagagttggagagaattgtggaaat 216  Q
    | | |||  | |||||||||| ||||||||| |||||| | |||||||| | ||||||||| | ||||||||||  |||||||||||  ||  |||||||    
T  6770530 tgcgagcaattggacagtctagaatttctatagttgttttctctacaaattatgctaattctagatggtgtatgctagagttggagaagatcatggaaat 6770629  T
Q  217 cagtagaaccaagggtatggtgcttgtgccagtgtt 252  Q
      | ||||||| |||| ||||  |||||||||||||    
T  6770630 tggcagaaccaggggtttggttgttgtgccagtgtt 6770665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 232
Target Start/End: Original strand, 6833306 - 6833521
Alignment:
Q  17 ttcatttcacatctctatttctctcttcaaaattccgggctttatgttttcaaagacgatgatgggattcaacgaggagatcagatctcagtcgcactaa 116  Q
    ||||| |||||||||| || |||||||||||||   ||| || ||| ||||||||||||| | | ||||||||||||||||||||||||| || ||||      
T  6833306 ttcatgtcacatctcttttcctctcttcaaaatgaagggattcatgctttcaaagacgataacgagattcaacgaggagatcagatctcaatctcactgt 6833405  T
Q  117 tccaagctgtcggacagtctaaaatttctattgttgttctgtctacaaactttgctaattcaaaatggtgtatgacagagttggagagaattgtggaaat 216  Q
    | | |||  | || ||||||| |||||||||  ||||| |||||||||| | ||| ||||||| ||||||||||  |||||||||||  ||  |||||||    
T  6833406 tgcgagcaattgggcagtctagaatttctatcattgttttgtctacaaattatgccaattcaagatggtgtatgctagagttggagaagataatggaaat 6833505  T
Q  217 cagtagaaccaagggt 232  Q
      | ||||||||||||    
T  6833506 tggaagaaccaagggt 6833521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 252
Target Start/End: Original strand, 6749855 - 6750094
Alignment:
Q  13 aaaattcatttcacatctctatttctctcttcaaaattccgggctttatgttttcaaagacgatgatgggattcaacgaggagatcagatctcagtcgca 112  Q
    ||||||||||||||||||  |||  |||||||||||| | | | || |||| ||| |||||||||| | |||||||||||||||||| || ||  |  |     
T  6749855 aaaattcatttcacatctgcattcttctcttcaaaatgcagcgattcatgtcttccaagacgatgacgagattcaacgaggagatcaaatatcgatatcg 6749954  T
Q  113 ctaatccaagctgtcggacagtctaaaatttctattgttgttctgtctacaaactttgctaattcaaaatggtgtatgacagagttggagagaattgtgg 212  Q
    ||  ||| |||  | | |||||||| ||||||||| |||||| ||||||||| || ||||||||||| ||||||||||  |||||||||||  ||  |||    
T  6749955 ctgttccgagcaattgaacagtctagaatttctatcgttgttttgtctacaagctatgctaattcaagatggtgtatgctagagttggagaagatcatgg 6750054  T
Q  213 aaatcagtagaaccaagggtatggtgcttgtgccagtgtt 252  Q
    ||||  |||||| ||||||| | ||  |||||||||||||    
T  6750055 aaatttgtagaaacaagggtctagttgttgtgccagtgtt 6750094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 6537166 - 6536928
Alignment:
Q  14 aaattcatttcacatctctatttctctcttcaaaattccgggctttatgttttcaaagacgatgatgggattcaacgaggagatcagatctcagtcgcac 113  Q
    |||||| |||||||| |  ||| ||||||||||||||||| | || ||||||||||||||||||| | |||  |||||||||||||||||||| |  |||    
T  6537166 aaattcgtttcacatttgaattcctctcttcaaaattccgcgattcatgttttcaaagacgatgacgagatcgaacgaggagatcagatctcaatatcac 6537067  T
Q  114 taatccaagctgtcggacagtctaaaatttctattgttgttctgtctacaaactttgctaattcaaaatggtgtatgacagagttggagagaattgtgga 213  Q
    |  | | |||  | |||| ||||| |||| |  | |||||| |||||| ||| | ||||||||||| ||||||||||  |||||||||||  ||  ||||    
T  6537066 tgttgcgagcaattggacggtctagaattgccctcgttgttttgtctaaaaaatatgctaattcaagatggtgtatgctagagttggagaagatcatgga 6536967  T
Q  214 aatcagtagaaccaagggtatggtgcttgtgccagtgtt 252  Q
    |||  | ||  ||| |||| ||||| |||||||||||||    
T  6536966 aattggcagggccaggggtctggtggttgtgccagtgtt 6536928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 6549491 - 6549253
Alignment:
Q  14 aaattcatttcacatctctatttctctcttcaaaattccgggctttatgttttcaaagacgatgatgggattcaacgaggagatcagatctcagtcgcac 113  Q
    |||||||||||||||||  ||| ||||||| ||||| | ||| || |||||||||||||||||     ||||||||||||||||||||| ||| || |||    
T  6549491 aaattcatttcacatctgcattcctctcttgaaaatgcagggattcatgttttcaaagacgatttcaagattcaacgaggagatcagatatcaatctcac 6549392  T
Q  114 taatccaagctgtcggacagtctaaaatttctattgttgttctgtctacaaactttgctaattcaaaatggtgtatgacagagttggagagaattgtgga 213  Q
    |  | | |||  | |||||||||| ||||| ||| |||||| |||||| ||| | ||||||||| | ||||||||||   ||||||||||  ||  ||||    
T  6549391 tgtttcgagcaattggacagtctagaatttgtatcgttgttttgtctaaaaattatgctaattctagatggtgtatgcttgagttggagaacatcatgga 6549292  T
Q  214 aatcagtagaaccaagggtatggtgcttgtgccagtgtt 252  Q
    |||  |||||| || |||| ||||  |||| ||||||||    
T  6549291 aattggtagaaacaggggtctggtcgttgtaccagtgtt 6549253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 252
Target Start/End: Original strand, 6648106 - 6648294
Alignment:
Q  64 tttcaaagacgatgatgggattcaacgaggagatcagatctcagtcgcactaatccaagctgtcggacagtctaaaatttctattgttgttctgtctaca 163  Q
    ||||| ||| ||||||  |||||| ||||||||||| ||||||||| ||||  | | |||  ||||||| |||| |||||| ||  || || ||||||||    
T  6648106 tttcagagatgatgatcagattcagcgaggagatcaaatctcagtctcactgttgcgagcaatcggacaatctagaatttccatcattattttgtctaca 6648205  T
Q  164 aactttgctaattcaaaatggtgtatgacagagttggagagaattgtggaaatcagtagaaccaagggtatggtgcttgtgccagtgtt 252  Q
    || | ||||||||| | ||||||||||  |||||||| ||  ||  |||||||  ||||||| | |||| ||||| || ||||||||||    
T  6648206 aattatgctaattccagatggtgtatgctagagttggtgaagataatggaaattggtagaactaggggtctggtggttttgccagtgtt 6648294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 6667143 - 6667232
Alignment:
Q  17 ttcatttcacatctctatttctctcttcaaaattccgggctttatgttttcaaagacgatgatgggattcaacgaggagatcagatctca 106  Q
    ||||| ||||| |||||||  |||||||||||| | ||  |||||  ||||| ||| ||||||| |||||||||||| ||||||||||||    
T  6667143 ttcatgtcacacctctattcttctcttcaaaatgcgggtatttatactttcagagatgatgatgagattcaacgaggtgatcagatctca 6667232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 6501450 - 6501267
Alignment:
Q  17 ttcatttcacatctctatttctctcttcaaaattccgggctttatgttttcaaagacgatgatgggattcaacgaggagatcagatctcagtcgcactaa 116  Q
    ||||| |||||||| |||  ||||||||||||| | ||  |||||  ||||| ||| ||||| | ||||||  |||||||||  |||||| |  |||||     
T  6501450 ttcatatcacatctttatacctctcttcaaaatgcaggaatttatactttcagagatgatgacgagattcagagaggagatcgaatctcaatgtcactat 6501351  T
Q  117 tccaagctgtcggacagtctaaaatttctattgttgttctgtctacaaactttgctaattcaaaatggtgtatgacagagttgg 200  Q
    |  ||||  |||| | ||||| |||||||||||||||| |||||||||  | ||| ||||| | ||||||||||  ||||||||    
T  6501350 tgaaagcaatcgggcggtctagaatttctattgttgttttgtctacaacttatgccaattcgagatggtgtatgctagagttgg 6501267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 6812731 - 6812820
Alignment:
Q  14 aaattcatttcacatctctatttctctcttcaaaattccgggctttatgttttcaaagacgatgatgggattcaacgaggagatcagatctca 106  Q
    ||||||||||| ||| | |||| ||||||||||||| | ||| |||||| ||||| |   |||| || |||||||||||||||||| ||||||    
T  6812731 aaattcatttcccatttgtattcctctcttcaaaatgcggggatttatgctttcaga---gatgctgagattcaacgaggagatcatatctca 6812820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 5e-31; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 18925459 - 18925647
Alignment:
Q  13 aaaattcatttcacatctctatttctctcttcaaaattccgggctttatgttttcaaagacgatgatgggattcaacgaggagatcagatctcagtcgca 112  Q
    ||||||||||||||||||||||   |||||||||||| ||||  || |||||||||||||| |||||| ||||||||||||||||||||||||| || ||    
T  18925459 aaaattcatttcacatctctatacttctcttcaaaatgccggtattcatgttttcaaagacaatgatgagattcaacgaggagatcagatctcattctca 18925558  T
Q  113 ctaatccaagctgtcggacagtctaaaatttctattgttgttctgtctacaaactttgctaattcaaaatggtgtatgacagagttgga 201  Q
    ||  |  ||||  | | | ||| || ||||||||| |||||| ||||||  || | ||||||||||| |||||||||| ||||||||||    
T  18925559 cttttgaaagcaattgaagagtgtagaatttctatagttgttttgtctagtaattatgctaattcaagatggtgtatgtcagagttgga 18925647  T

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Target: chr7; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 252
Target Start/End: Complemental strand, 34734445 - 34734206
Alignment:
Q  13 aaaattcatttcacatctctatttctctcttcaaaattccgggctttatgttttcaaagacgatgatgggattcaacgaggagatcagatctcagtcgca 112  Q
    ||||||||||||||||||||||    | ||| ||||| | ||  |||||||||| | || |||||||| |||||||||||| |||||| |||||||  ||    
T  34734445 aaaattcatttcacatctctatacggcccttgaaaatgctggaatttatgtttttagaggcgatgatgagattcaacgaggtgatcaggtctcagtgtca 34734346  T
Q  113 ctaatccaagctgtcggacagtctaaaatttctattgttgttctgtctacaaactttgctaattcaaaatggtgtatgacagagttggagagaattgtgg 212  Q
     |  | |||||  | |||||||||| |||||||||  ||||| |||||| ||||| ||||||||||| ||||||||||  |||| ||||||  ||  |||    
T  34734345 ttgttgcaagccataggacagtctagaatttctatcattgttttgtctagaaactatgctaattcaagatggtgtatgctagagctggagaatatcatgg 34734246  T
Q  213 aaatcagtagaaccaagggtatggtgcttgtgccagtgtt 252  Q
      |  || |||||| ||||||||||| |||| ||||||||    
T  34734245 gcaatagcagaacccagggtatggtggttgtaccagtgtt 34734206  T

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Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 252
Target Start/End: Complemental strand, 34729881 - 34729642
Alignment:
Q  13 aaaattcatttcacatctctatttctctcttcaaaattccgggctttatgttttcaaagacgatgatgggattcaacgaggagatcagatctcagtcgca 112  Q
    ||||||||||||||||||||||    ||||| ||||| | ||  |||||||||| | ||| ||||||| |||||||||||| |||||||||||||   ||    
T  34729881 aaaattcatttcacatctctatacagctcttgaaaatgctggaatttatgtttttagagatgatgatgagattcaacgaggtgatcagatctcagcgtca 34729782  T
Q  113 ctaatccaagctgtcggacagtctaaaatttctattgttgttctgtctacaaactttgctaattcaaaatggtgtatgacagagttggagagaattgtgg 212  Q
     |  | |||||  | |  ||||||||||||||||| |||||| |||||| || || |||| |||||| ||||||||||  |||| ||||||  ||  |||    
T  34729781 ttgttgcaagcaattgagcagtctaaaatttctatcgttgttttgtctagaagctatgctgattcaagatggtgtatgctagagctggagaacatcatgg 34729682  T
Q  213 aaatcagtagaaccaagggtatggtgcttgtgccagtgtt 252  Q
      |  || |||||| ||||||||||| |||| ||||||||    
T  34729681 gcaatagcagaacccagggtatggtggttgtaccagtgtt 34729642  T

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Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 202
Target Start/End: Complemental strand, 34719977 - 34719791
Alignment:
Q  16 attcatttcacatctctatttctctcttcaaaattccgggctttatgttttcaaagacgatgatgggattcaacgaggagatcagatctcagtcgcacta 115  Q
    |||||||||||||||||||  ||||||||||||| |  |  || ||||||| | ||||||| ||| |||||| ||||| ||||||||||| ||| ||||     
T  34719977 attcatttcacatctctatacctctcttcaaaatgctagaattaatgtttttagagacgataatgagattcagcgaggtgatcagatctcggtctcactg 34719878  T
Q  116 atccaagctgtcggacagtctaaaatttctattgttgttctgtctacaaactttgctaattcaaaatggtgtatgacagagttggag 202  Q
     | | |||  | || ||||||| |||||||||| ||||  ||||||  || | ||| ||||||| ||||||||||  ||||||||||    
T  34719877 ttgcgagcaattgggcagtctagaatttctattattgtattgtctagtaattatgcaaattcaagatggtgtatgcaagagttggag 34719791  T

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Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 34715208 - 34715121
Alignment:
Q  22 ttcacatctctatttctctcttcaaaattccgggctttatgttttcaaagacgatgatgggattcaacgaggagatcagatctcagtc 109  Q
    |||||||||||||  ||||||||||||| | ||  |||||||||| | ||||||| ||| |||||||| ||||||  |||||||||||    
T  34715208 ttcacatctctatacctctcttcaaaatgctggaatttatgtttttagagacgataatgagattcaaccaggagaaaagatctcagtc 34715121  T

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Target: scaffold0813 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0813
Description:

Target: scaffold0813; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 2147 - 2074
Alignment:
Q  130 acagtctaaaatttctattgttgttctgtctacaaactttgctaattcaaaatggtgtatgacagagttggaga 203  Q
    |||||||| ||||||||| |||||| |||||||||| | ||||||||||| ||||||||||  |||||||||||    
T  2147 acagtctagaatttctatcgttgttttgtctacaaattatgctaattcaagatggtgtatgttagagttggaga 2074  T

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Target: scaffold0373 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 12860 - 12814
Alignment:
Q  60 atgttttcaaagacgatgatgggattcaacgaggagatcagatctca 106  Q
    ||||||||||||||||||||| |||||| ||||||||||| ||||||    
T  12860 atgttttcaaagacgatgatgagattcaccgaggagatcatatctca 12814  T

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Target: scaffold0552 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 203 - 292
Alignment:
Q  14 aaattcatttcacatctctatttctctcttcaaaattccgggctttatgttttcaaagacgatgatgggattcaacgaggagatcagatctca 106  Q
    ||||||||||| ||| | |||| ||||||||||||| | ||| |||||| ||||| |   |||| || |||||||||||||||||| ||||||    
T  203 aaattcatttcccatttgtattcctctcttcaaaatgcggggatttatgctttcaga---gatgctgagattcaacgaggagatcatatctca 292  T

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