View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15042_high_14 (Length: 329)

Name: NF15042_high_14
Description: NF15042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15042_high_14
NF15042_high_14
[»] chr1 (20 HSPs)
chr1 (1-313)||(35136969-35137281)
chr1 (60-139)||(35145084-35145163)
chr1 (3-63)||(52362609-52362669)
chr1 (1-61)||(13489787-13489847)
chr1 (3-59)||(36577300-36577356)
chr1 (3-59)||(40316832-40316888)
chr1 (3-61)||(15704948-15705006)
chr1 (1-63)||(48326093-48326154)
chr1 (1-59)||(50328029-50328087)
chr1 (1-57)||(5486021-5486077)
chr1 (1-61)||(34254237-34254297)
chr1 (1-59)||(6143808-6143866)
chr1 (1-59)||(29154903-29154961)
chr1 (1-59)||(32914960-32915018)
chr1 (1-58)||(33358047-33358104)
chr1 (22-59)||(48220032-48220069)
chr1 (1-60)||(8200200-8200259)
chr1 (1-60)||(10889933-10889992)
chr1 (7-54)||(43367794-43367841)
chr1 (1-59)||(50824866-50824924)
[»] chr2 (19 HSPs)
chr2 (1-55)||(9634328-9634382)
chr2 (3-59)||(6170757-6170813)
chr2 (3-59)||(24562905-24562961)
chr2 (1-59)||(13765525-13765583)
chr2 (1-59)||(23352795-23352853)
chr2 (3-56)||(2563831-2563884)
chr2 (3-59)||(6998956-6999012)
chr2 (4-59)||(3012740-3012795)
chr2 (1-59)||(32869951-32870009)
chr2 (1-59)||(36643972-36644030)
chr2 (2-55)||(41586560-41586613)
chr2 (1-61)||(13347700-13347760)
chr2 (1-55)||(7574560-7574614)
chr2 (1-63)||(25881669-25881731)
chr2 (1-55)||(28245852-28245906)
chr2 (22-55)||(16677819-16677852)
chr2 (22-59)||(34119540-34119577)
chr2 (1-58)||(37105763-37105820)
chr2 (1-61)||(14233604-14233664)
[»] chr6 (10 HSPs)
chr6 (1-62)||(13143267-13143328)
chr6 (1-59)||(754326-754384)
chr6 (3-55)||(20822761-20822813)
chr6 (1-60)||(3832588-3832647)
chr6 (1-64)||(35213444-35213507)
chr6 (1-59)||(18141189-18141247)
chr6 (1-59)||(32459404-32459462)
chr6 (3-55)||(32046825-32046877)
chr6 (1-59)||(6531068-6531126)
chr6 (3-62)||(2688949-2689009)
[»] chr5 (15 HSPs)
chr5 (1-61)||(8675319-8675379)
chr5 (3-61)||(43213945-43214003)
chr5 (1-59)||(43441863-43441921)
chr5 (3-64)||(32912165-32912226)
chr5 (3-59)||(189591-189647)
chr5 (1-61)||(15478783-15478843)
chr5 (1-59)||(10649560-10649618)
chr5 (1-59)||(19481070-19481128)
chr5 (1-59)||(41175594-41175652)
chr5 (1-56)||(15952936-15952991)
chr5 (25-59)||(189522-189556)
chr5 (1-59)||(34270452-34270510)
chr5 (1-62)||(6446403-6446464)
chr5 (1-49)||(30004689-30004737)
chr5 (1-61)||(34124746-34124806)
[»] chr3 (15 HSPs)
chr3 (3-59)||(55400126-55400182)
chr3 (1-59)||(6999295-6999353)
chr3 (1-59)||(41281609-41281667)
chr3 (1-55)||(46019587-46019641)
chr3 (1-59)||(51465802-51465860)
chr3 (1-62)||(24095291-24095352)
chr3 (1-59)||(46852020-46852078)
chr3 (1-62)||(3281601-3281662)
chr3 (1-61)||(36412248-36412309)
chr3 (25-59)||(3953363-3953397)
chr3 (1-59)||(37411000-37411058)
chr3 (22-60)||(49761453-49761491)
chr3 (1-59)||(50206858-50206916)
chr3 (1-57)||(39697112-39697168)
chr3 (1-49)||(46139702-46139750)
[»] chr7 (13 HSPs)
chr7 (1-59)||(11352862-11352920)
chr7 (1-63)||(21822483-21822545)
chr7 (1-49)||(44184457-44184505)
chr7 (1-59)||(7817761-7817819)
chr7 (1-59)||(28036869-28036927)
chr7 (3-59)||(41458723-41458779)
chr7 (3-59)||(43573431-43573487)
chr7 (1-55)||(3062455-3062509)
chr7 (4-54)||(10700079-10700129)
chr7 (1-59)||(13729851-13729909)
chr7 (1-58)||(10055521-10055578)
chr7 (3-56)||(42555691-42555744)
chr7 (1-61)||(41894040-41894100)
[»] chr4 (10 HSPs)
chr4 (1-59)||(17683466-17683524)
chr4 (1-59)||(22819774-22819832)
chr4 (1-62)||(47099145-47099206)
chr4 (1-59)||(2999237-2999295)
chr4 (3-59)||(14010006-14010062)
chr4 (1-56)||(46405865-46405920)
chr4 (1-55)||(18882867-18882921)
chr4 (1-58)||(45143562-45143619)
chr4 (1-58)||(45152331-45152388)
chr4 (3-59)||(38338810-38338866)
[»] chr8 (11 HSPs)
chr8 (1-55)||(7472919-7472973)
chr8 (1-59)||(36885376-36885434)
chr8 (1-58)||(37597363-37597420)
chr8 (1-57)||(36568086-36568142)
chr8 (1-56)||(4658145-4658200)
chr8 (1-59)||(12707275-12707333)
chr8 (1-59)||(16872044-16872102)
chr8 (1-59)||(30439394-30439452)
chr8 (1-62)||(34018933-34018994)
chr8 (3-48)||(41541984-41542029)
chr8 (3-59)||(42569617-42569673)
[»] scaffold0141 (1 HSPs)
scaffold0141 (1-59)||(12057-12115)
[»] scaffold0136 (1 HSPs)
scaffold0136 (1-59)||(38550-38608)


Alignment Details
Target: chr1 (Bit Score: 293; Significance: 1e-164; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 1 - 313
Target Start/End: Original strand, 35136969 - 35137281
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctcatattagattatgtagtttacactctcctatattaaataat 100  Q
    |||||||||||||||| ||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  35136969 tgtaaattatggttgtcctaaaaattgtcaaccaaatgattgttcaaataacactcctcatattagattatgtagtttacactctcctgtattaaataat 35137068  T
Q  101 gtataacacatgcacacaattaaattcaggttgaataacatggagataggaaaaaaccagaaaggttcctctcctgcaaaagacaagacagtcactgttt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35137069 gtataacacatgcacacaattaaattcaggttgaataacatggagataggaaaaaaccagaaaggttcctctcctgcaaaagacaagacagtcactgttt 35137168  T
Q  201 tggggaataacaatatgtcaccatcagacataacatgtataacatatccacaagaatttccatttctacataaaccatatccagaagaagtacgtaattt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35137169 tggggaataacaatatgtcaccatcagacataacatgtataacatatccacaagaatttccatttctacataaaccatatccagaagaagtacgtaattt 35137268  T
Q  301 acatcctttaact 313  Q
    |||||||||||||    
T  35137269 acatcctttaact 35137281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 60 - 139
Target Start/End: Original strand, 35145084 - 35145163
Alignment:
Q  60 atattagattatgtagtttacactctcctatattaaataatgtataacacatgcacacaattaaattcaggttgaataac 139  Q
    ||||||||||||| ||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35145084 atattagattatgcagtatacactctcgcatattaaataatgtataacacatgcacacaattaaattcaggttgaataac 35145163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 52362609 - 52362669
Alignment:
Q  3 taaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctcatat 63  Q
    |||||||||||||| ||| ||||||||||||||||| |||||||||| |||||||||||||    
T  52362609 taaattatggttgtcctaaaagttgtcaaccaaatggttgttcaaataacactcctcatat 52362669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 13489787 - 13489847
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctcat 61  Q
    |||||||||||||||| | ||||||||||||||||||  |||||||||| |||||||||||    
T  13489787 tgtaaattatggttgtcccagaagttgtcaaccaaatagttgttcaaataacactcctcat 13489847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 36577356 - 36577300
Alignment:
Q  3 taaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||| ||| ||||||||||||||||| |||||||||| |||||||||    
T  36577356 taaattatggttgtcctaaaagttgtcaaccaaatggttgttcaaataacactcctc 36577300  T

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Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 40316888 - 40316832
Alignment:
Q  3 taaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||| ||| ||||||||||||||||| |||||||||| |||||||||    
T  40316888 taaattatggttgtcctaaaagttgtcaaccaaatggttgttcaaataacactcctc 40316832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 15705006 - 15704948
Alignment:
Q  3 taaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctcat 61  Q
    |||||||||||||| ||| ||||| ||||||||||| |||||||||| |||||||||||    
T  15705006 taaattatggttgtcctaaaagttatcaaccaaatggttgttcaaataacactcctcat 15704948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 48326093 - 48326154
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctcatat 63  Q
    |||||||||||||||| | | ||||||||||||||||| |||||||||| |||||||||||||    
T  48326093 tgtaaattatggttgtccaa-aagttgtcaaccaaatggttgttcaaataacactcctcatat 48326154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 50328087 - 50328029
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||||| | | ||||||||||||||||| |||||||||| |||||||||    
T  50328087 tgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctc 50328029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 5486021 - 5486077
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcc 57  Q
    ||||||||||||||||| || ||||||||||  |||||||||||||||| |||||||    
T  5486021 tgtaaattatggttgttttataagttgtcaagtaaatgattgttcaaataacactcc 5486077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34254297 - 34254237
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctcat 61  Q
    |||||||||| ||||| | | ||||| |||||||||||||||||||||| |||||||||||    
T  34254297 tgtaaattatagttgtcccaaaagttatcaaccaaatgattgttcaaataacactcctcat 34254237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 6143808 - 6143866
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    ||||||||||||||||  || | |||||||||||||||||||||||||| ||| |||||    
T  6143808 tgtaaattatggttgtcttaaatgttgtcaaccaaatgattgttcaaataacaatcctc 6143866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 29154903 - 29154961
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||| ||||| | | ||||||||||||||||| |||||||||| |||||||||    
T  29154903 tgtaaattatcgttgtcccataagttgtcaaccaaatggttgttcaaataacactcctc 29154961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 32915018 - 32914960
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    ||||||||||| |||||| | ||||||||||||||||  |||||||||| |||||||||    
T  32915018 tgtaaattatgattgttccaaaagttgtcaaccaaatagttgttcaaataacactcctc 32914960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 33358104 - 33358047
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcct 58  Q
    ||||||||||||||||   | ||||||||||||||||| |||||||||| ||||||||    
T  33358104 tgtaaattatggttgtcacataagttgtcaaccaaatggttgttcaaataacactcct 33358047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 48220069 - 48220032
Alignment:
Q  22 aagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||||||||||||||||| |||||||||    
T  48220069 aagttgtcaaccaaatgattgttcaaataacactcctc 48220032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 8200200 - 8200259
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctca 60  Q
    |||||||||||||||| | | ||||||||||||||| |  ||||||||| ||||||||||    
T  8200200 tgtaaattatggttgtcccataagttgtcaaccaaaaggctgttcaaataacactcctca 8200259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 10889992 - 10889933
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctca 60  Q
    ||||||||||||||||   | ||||||||||||||||  |||||||||| ||||||||||    
T  10889992 tgtaaattatggttgtcacaaaagttgtcaaccaaatagttgttcaaataacactcctca 10889933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 43367841 - 43367794
Alignment:
Q  7 ttatggttgttctagaagttgtcaaccaaatgattgttcaaatgacac 54  Q
    |||||||||||||| |||||||||  ||||||||||||||||| ||||    
T  43367841 ttatggttgttctaaaagttgtcacacaaatgattgttcaaataacac 43367794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 50824866 - 50824924
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    ||||||||||||||||   | |||||||| |||||||| |||||||||| |||||||||    
T  50824866 tgtaaattatggttgtatcataagttgtccaccaaatggttgttcaaataacactcctc 50824924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 9634382 - 9634328
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacact 55  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||| |||||    
T  9634382 tgtaaattatggttgttcaaaaagttgtcaaccaaatgattgttcaaataacact 9634328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 6170757 - 6170813
Alignment:
Q  3 taaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||| ||| ||||||||||||||||| |||||||||| |||||||||    
T  6170757 taaattatggttgtcctaaaagttgtcaaccaaatggttgttcaaataacactcctc 6170813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 24562961 - 24562905
Alignment:
Q  3 taaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||| ||| ||||||||||||||||| |||||||||| |||||||||    
T  24562961 taaattatggttgtcctaaaagttgtcaaccaaatggttgttcaaataacactcctc 24562905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 13765525 - 13765583
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||||| | | ||||||||||||||||| |||||||||| |||||||||    
T  13765525 tgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctc 13765583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 23352853 - 23352795
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||||| | | ||||||||||||||||| |||||||||| |||||||||    
T  23352853 tgtaaattatggttgtcccataagttgtcaaccaaatggttgttcaaataacactcctc 23352795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 2563831 - 2563884
Alignment:
Q  3 taaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactc 56  Q
    ||||||||| |||| ||| |||||||||||||||||||||||||||| ||||||    
T  2563831 taaattatgattgtcctaaaagttgtcaaccaaatgattgttcaaataacactc 2563884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 6999012 - 6998956
Alignment:
Q  3 taaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||| ||| ||||||||||||||||| ||||| |||| |||||||||    
T  6999012 taaattatggttgtcctaaaagttgtcaaccaaatggttgtttaaataacactcctc 6998956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 3012795 - 3012740
Alignment:
Q  4 aaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    ||||||||||||| | | ||||||||||||||||| |||||||||| |||||||||    
T  3012795 aaattatggttgtcccataagttgtcaaccaaatggttgttcaaataacactcctc 3012740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 32869951 - 32870009
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||||| | | || |||||||||||||| |||||||||| |||||||||    
T  32869951 tgtaaattatggttgtcccaaaaattgtcaaccaaatggttgttcaaataacactcctc 32870009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 36644030 - 36643972
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||||| | | || |||||||||||||| |||||||||| |||||||||    
T  36644030 tgtaaattatggttgtcccataaattgtcaaccaaatggttgttcaaataacactcctc 36643972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 41586613 - 41586560
Alignment:
Q  2 gtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacact 55  Q
    ||||||||||||||||| | ||||||||||| ||||| |||||||||| |||||    
T  41586613 gtaaattatggttgttccataagttgtcaactaaatggttgttcaaataacact 41586560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13347760 - 13347700
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctcat 61  Q
    |||||||||||||||| | | || |||||||||||||| |||||||||| |||||| ||||    
T  13347760 tgtaaattatggttgtcccaaaaattgtcaaccaaatggttgttcaaataacactcatcat 13347700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 7574560 - 7574614
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacact 55  Q
    |||||||||| ||||||| | || |||||||||||||| |||||||||| |||||    
T  7574560 tgtaaattatagttgttccaaaaattgtcaaccaaatggttgttcaaataacact 7574614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 25881669 - 25881731
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctcatat 63  Q
    |||||||||||| ||||  | ||||||||||||||||| |||||||||| | |||||| ||||    
T  25881669 tgtaaattatggctgtttcaaaagttgtcaaccaaatggttgttcaaataagactccttatat 25881731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 28245852 - 28245906
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacact 55  Q
    ||||||||| |||||||  | ||||||||||||||||| |||||||||| |||||    
T  28245852 tgtaaattaaggttgtttcaaaagttgtcaaccaaatggttgttcaaataacact 28245906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 16677819 - 16677852
Alignment:
Q  22 aagttgtcaaccaaatgattgttcaaatgacact 55  Q
    |||||||||||||||||||||||||||| |||||    
T  16677819 aagttgtcaaccaaatgattgttcaaataacact 16677852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 34119577 - 34119540
Alignment:
Q  22 aagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  34119577 aagttgtcaaccaaatggttgttcaaattacactcctc 34119540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 37105763 - 37105820
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcct 58  Q
    ||||||||||||||||   | ||||||||||||||||  |||||||||| ||||||||    
T  37105763 tgtaaattatggttgtcacaaaagttgtcaaccaaatagttgttcaaataacactcct 37105820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14233664 - 14233604
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctcat 61  Q
    ||||||||||||||||  |  ||||||||||| ||||| |||||||||| ||||| |||||    
T  14233664 tgtaaattatggttgtcttgtaagttgtcaacaaaatggttgttcaaataacacttctcat 14233604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13143328 - 13143267
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctcata 62  Q
    |||||||||||||||| | | ||||||||||||||||| |||||||||| ||||||||||||    
T  13143328 tgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctcata 13143267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 754384 - 754326
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||||||| | || |||||||||||||| |||||||||| |||||||||    
T  754384 tgtaaattatggttgttccaaaaattgtcaaccaaatggttgttcaaataacactcctc 754326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 20822813 - 20822761
Alignment:
Q  3 taaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacact 55  Q
    |||||||||||||| ||| ||||||||||||||||| |||||||||| |||||    
T  20822813 taaattatggttgtcctaaaagttgtcaaccaaatggttgttcaaataacact 20822761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 3832588 - 3832647
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctca 60  Q
    |||||||||||||||| | | |||||||||| |||||| |||||||||| ||||||||||    
T  3832588 tgtaaattatggttgtcccataagttgtcaatcaaatggttgttcaaataacactcctca 3832647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 35213507 - 35213444
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctcatatt 64  Q
    ||||||||||| |||| | | ||||||||||||||||| |||||||||| ||||||||| ||||    
T  35213507 tgtaaattatgattgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctcttatt 35213444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 18141247 - 18141189
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    ||||||||||||||||   | ||||||||||||||||| |||||||||| |||||||||    
T  18141247 tgtaaattatggttgtcacaaaagttgtcaaccaaatggttgttcaaataacactcctc 18141189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 32459462 - 32459404
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||||| ||| |||||||||| |||||  |||||||||| |||||||||    
T  32459462 tgtaaattatggttgtcctaaaagttgtcaatcaaattgttgttcaaataacactcctc 32459404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 32046825 - 32046877
Alignment:
Q  3 taaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacact 55  Q
    |||||||||||||| | | ||||||||||||||||| |||||||||| |||||    
T  32046825 taaattatggttgtcccataagttgtcaaccaaatggttgttcaaataacact 32046877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 6531126 - 6531068
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||||| | |  |||| ||||||||||| |||||||||| |||||||||    
T  6531126 tgtaaattatggttgtcccattagttatcaaccaaatggttgttcaaataacactcctc 6531068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 2689009 - 2688949
Alignment:
Q  3 taaattatggttgttctagaagttgtcaaccaaa-tgattgttcaaatgacactcctcata 62  Q
    ||||||||||||||   | ||||||||||||||| ||||||||||||| ||| ||||||||    
T  2689009 taaattatggttgtcacaaaagttgtcaaccaaattgattgttcaaataacattcctcata 2688949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 8675379 - 8675319
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctcat 61  Q
    |||||||||||||||| | | ||||||||||||||||| |||||||||| |||||||||||    
T  8675379 tgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctcat 8675319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 43214003 - 43213945
Alignment:
Q  3 taaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctcat 61  Q
    |||||||| |||||| || ||||||||||||||||| |||||||||| |||||||||||    
T  43214003 taaattatagttgttttaaaagttgtcaaccaaatggttgttcaaataacactcctcat 43213945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 43441863 - 43441921
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    ||||||||||||||||  || ||||||||||||||||| |||||||||| |||||||||    
T  43441863 tgtaaattatggttgtcttaaaagttgtcaaccaaatggttgttcaaataacactcctc 43441921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 32912165 - 32912226
Alignment:
Q  3 taaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctcatatt 64  Q
    ||||||||| |||| | | ||||||||||||||||| |||||||||| ||||||||||||||    
T  32912165 taaattatgattgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctcatatt 32912226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 189647 - 189591
Alignment:
Q  3 taaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    ||||||||| |||| | | |||||||||||||||||||||||||||| |||||||||    
T  189647 taaattatgattgtcccaaaagttgtcaaccaaatgattgttcaaataacactcctc 189591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15478783 - 15478843
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctcat 61  Q
    |||||||||||||||||| | || |||||||||||||  |||||||||| |||||||||||    
T  15478783 tgtaaattatggttgttccaaaaattgtcaaccaaatagttgttcaaataacactcctcat 15478843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 10649560 - 10649618
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    ||||||||||||||||   | ||||||||||||||||| |||||||||| |||||||||    
T  10649560 tgtaaattatggttgtcacaaaagttgtcaaccaaatggttgttcaaataacactcctc 10649618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 19481128 - 19481070
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||| ||||| | | ||||| |||||||||||||||||||||| |||||||||    
T  19481128 tgtaaattatagttgtcccaaaagttatcaaccaaatgattgttcaaataacactcctc 19481070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 41175652 - 41175594
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    ||||||||||||||||   | ||||||||||||||||| |||||||||| |||||||||    
T  41175652 tgtaaattatggttgtcacataagttgtcaaccaaatggttgttcaaataacactcctc 41175594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 15952991 - 15952936
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactc 56  Q
    ||||||||||||||||   | ||||||||||||||||| |||||||||| ||||||    
T  15952991 tgtaaattatggttgtcacataagttgtcaaccaaatggttgttcaaataacactc 15952936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 59
Target Start/End: Complemental strand, 189556 - 189522
Alignment:
Q  25 ttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    ||||||||||||||||||||||||| |||||||||    
T  189556 ttgtcaaccaaatgattgttcaaataacactcctc 189522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 34270452 - 34270510
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    ||||||||||||||||   | || |||||||||||||| |||||||||| |||||||||    
T  34270452 tgtaaattatggttgtctcaaaatttgtcaaccaaatggttgttcaaataacactcctc 34270510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6446464 - 6446403
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctcata 62  Q
    |||||||||||||||||| | || |||||||||||||  ||||||||||  ||||| |||||    
T  6446464 tgtaaattatggttgttcaaaaaattgtcaaccaaattgttgttcaaatatcactcttcata 6446403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 30004737 - 30004689
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaat 49  Q
    |||||||||| ||||||| | ||||||||||||||| | ||||||||||    
T  30004737 tgtaaattatagttgttccaaaagttgtcaaccaaacggttgttcaaat 30004689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 34124746 - 34124806
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctcat 61  Q
    ||||||||||||||||  || || |||||||  ||||| |||||||||| |||||||||||    
T  34124746 tgtaaattatggttgtcttaaaaattgtcaattaaatggttgttcaaataacactcctcat 34124806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 55400126 - 55400182
Alignment:
Q  3 taaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||| ||| ||||||||||||||||| |||||||||| |||||||||    
T  55400126 taaattatggttgtcctaaaagttgtcaaccaaatggttgttcaaataacactcctc 55400182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 6999295 - 6999353
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||||| | | ||||||||||||||||| |||||||||| |||||||||    
T  6999295 tgtaaattatggttgtcccataagttgtcaaccaaatggttgttcaaataacactcctc 6999353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 41281667 - 41281609
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||| | ||||||| | |||||||||||||||||||||||||||| |||||||||    
T  41281667 tgtaaattttagttgttccataagttgtcaaccaaatgattgttcaaataacactcctc 41281609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 46019587 - 46019641
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacact 55  Q
    |||||||||||||||||| | ||||||||||||||||| |||||||||| |||||    
T  46019587 tgtaaattatggttgttccaaaagttgtcaaccaaatggttgttcaaataacact 46019641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 51465860 - 51465802
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||||| | | ||||||||||||||||| |||||||||| |||||||||    
T  51465860 tgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctc 51465802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 24095352 - 24095291
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctcata 62  Q
    ||||||||||||||||  || |||||||||||||||||  ||||||||| ||||||||||||    
T  24095352 tgtaaattatggttgtcataaaagttgtcaaccaaatggatgttcaaataacactcctcata 24095291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 46852078 - 46852020
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    ||||||||||| |||| | | ||||||||||||||||| |||||||||| |||||||||    
T  46852078 tgtaaattatgattgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctc 46852020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3281662 - 3281601
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctcata 62  Q
    ||||||||||||||||  |  |||||| |||||||||| |||||||||| ||||||||||||    
T  3281662 tgtaaattatggttgtcatgtaagttgacaaccaaatggttgttcaaataacactcctcata 3281601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 36412248 - 36412309
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaa-ccaaatgattgttcaaatgacactcctcat 61  Q
    |||||||||||||||| | | |||||||||| ||||||| |||||||||| |||||||||||    
T  36412248 tgtaaattatggttgtcccataagttgtcaaaccaaatggttgttcaaataacactcctcat 36412309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 59
Target Start/End: Complemental strand, 3953397 - 3953363
Alignment:
Q  25 ttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    ||||||||||||||||||||||||| |||||||||    
T  3953397 ttgtcaaccaaatgattgttcaaataacactcctc 3953363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 37411000 - 37411058
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||||||  | | ||||||||| ||||| |||||||||| |||||||||    
T  37411000 tgtaaattatggttgtttcataggttgtcaactaaatggttgttcaaataacactcctc 37411058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 60
Target Start/End: Original strand, 49761453 - 49761491
Alignment:
Q  22 aagttgtcaaccaaatgattgttcaaatgacactcctca 60  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  49761453 aagttgtcaactaaatgattgttcaaataacactcctca 49761491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 50206916 - 50206858
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||||| ||| ||||||||||| ||||  ||||| |||| |||||||||    
T  50206916 tgtaaattatggttgtcctaaaagttgtcaactaaatagttgtttaaataacactcctc 50206858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 39697168 - 39697112
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcc 57  Q
    |||||||||||||||| | | |||||||||| |||||  |||||||||| |||||||    
T  39697168 tgtaaattatggttgtcccaaaagttgtcaatcaaatagttgttcaaataacactcc 39697112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 46139750 - 46139702
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaat 49  Q
    ||||||||||| || |  || ||||||||||||||||||||||||||||    
T  46139750 tgtaaattatgattatcttaaaagttgtcaaccaaatgattgttcaaat 46139702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 11352920 - 11352862
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||||| | | ||||||||||||||||| |||||||||| |||||||||    
T  11352920 tgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctc 11352862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 21822545 - 21822483
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctcatat 63  Q
    ||||||||||||||||| || ||||||||||| ||||| |||||||||| ||||| |||||||    
T  21822545 tgtaaattatggttgttttaaaagttgtcaactaaatggttgttcaaataacacttctcatat 21822483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 44184505 - 44184457
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaat 49  Q
    |||||||||||||||||| | ||||||||||||||||| ||||||||||    
T  44184505 tgtaaattatggttgttccaaaagttgtcaaccaaatggttgttcaaat 44184457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 7817761 - 7817819
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    ||||||||||||||||   | ||||||||||||||||| |||||||||| |||||||||    
T  7817761 tgtaaattatggttgtcacataagttgtcaaccaaatggttgttcaaataacactcctc 7817819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 28036869 - 28036927
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||||| | | ||||||||||||||||| |||||||| | |||||||||    
T  28036869 tgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttcaattaacactcctc 28036927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 41458723 - 41458779
Alignment:
Q  3 taaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    ||||||||||||||  |  ||||||||||||||||| |||||||||| |||||||||    
T  41458723 taaattatggttgtcatgtaagttgtcaaccaaatggttgttcaaataacactcctc 41458779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 43573487 - 43573431
Alignment:
Q  3 taaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    ||||||||||||||   | || ||||||||||||||||||||||||| |||||||||    
T  43573487 taaattatggttgtctcaaaaattgtcaaccaaatgattgttcaaataacactcctc 43573431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 3062455 - 3062509
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacact 55  Q
    ||||||||||||||||  |  ||||||||||||||||| |||||||||| |||||    
T  3062455 tgtaaattatggttgtcatgtaagttgtcaaccaaatggttgttcaaataacact 3062509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 10700129 - 10700079
Alignment:
Q  4 aaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacac 54  Q
    ||||||||||||| | | |||||||||| ||||||||||||||||| ||||    
T  10700129 aaattatggttgtcccaaaagttgtcaatcaaatgattgttcaaataacac 10700079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 13729851 - 13729909
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||||| | | ||||||||||||||||| ||| | |||| |||||||||    
T  13729851 tgtaaattatggttgtcccaaaagttgtcaaccaaatggttgctgaaataacactcctc 13729909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10055578 - 10055521
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcct 58  Q
    |||||||||| ||||| | | ||||||||||||||||| ||||| |||| ||||||||    
T  10055578 tgtaaattatagttgtcccataagttgtcaaccaaatggttgtttaaataacactcct 10055521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 42555691 - 42555744
Alignment:
Q  3 taaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactc 56  Q
    ||||||||||||||   | ||||||||||||||||| |||||||||| ||||||    
T  42555691 taaattatggttgtctcaaaagttgtcaaccaaatggttgttcaaataacactc 42555744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 41894040 - 41894100
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctcat 61  Q
    ||||||||||||||||   | || |||||||| ||||| |||||||||| |||||||||||    
T  41894040 tgtaaattatggttgtcacaaaaattgtcaactaaatggttgttcaaataacactcctcat 41894100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 17683466 - 17683524
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||||| | | ||||||||||||||||| |||||||||| |||||||||    
T  17683466 tgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctc 17683524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 22819774 - 22819832
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||||| | | ||||||||||||||||| |||||||||| |||||||||    
T  22819774 tgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctc 22819832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 47099145 - 47099206
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctcata 62  Q
    |||||||||||||||| | | ||||| ||||||||||| |||||||||| ||||||||||||    
T  47099145 tgtaaattatggttgtcccaaaagttatcaaccaaatggttgttcaaataacactcctcata 47099206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 2999237 - 2999295
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||||| ||| ||||||||||  ||||| |||||||||| |||||||||    
T  2999237 tgtaaattatggttgtcctaaaagttgtcaattaaatggttgttcaaataacactcctc 2999295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 14010062 - 14010006
Alignment:
Q  3 taaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||| | | |||||||||||||||| ||| ||||||| |||||||||    
T  14010062 taaattatggttgtcccaaaagttgtcaaccaaataattattcaaataacactcctc 14010006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 46405920 - 46405865
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactc 56  Q
    |||||||||||||||| | | || || |||||||||||||||||||||| ||||||    
T  46405920 tgtaaattatggttgtccaaaaaattatcaaccaaatgattgttcaaataacactc 46405865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 18882921 - 18882867
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacact 55  Q
    ||||||||||| || ||| | ||||||||||||||||| |||||||||| |||||    
T  18882921 tgtaaattatgatttttccaaaagttgtcaaccaaatggttgttcaaataacact 18882867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 45143619 - 45143562
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcct 58  Q
    |||||||||||||||| | | ||||||||||||||||  |||||||||| ||| ||||    
T  45143619 tgtaaattatggttgtcccaaaagttgtcaaccaaatagttgttcaaataacaatcct 45143562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 45152388 - 45152331
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcct 58  Q
    |||||||||||||||| | | ||||||||||||||||  |||||||||| ||| ||||    
T  45152388 tgtaaattatggttgtcccaaaagttgtcaaccaaatagttgttcaaataacaatcct 45152331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 38338866 - 38338810
Alignment:
Q  3 taaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||||| | || || |||||||||||||||||| ||| | |||||||    
T  38338866 taaattatggttgttccaaaaattatcaaccaaatgattgttcgaataatactcctc 38338810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 7472973 - 7472919
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacact 55  Q
    |||||||||||||| ||||| ||||||||||||||||  |||||||||| |||||    
T  7472973 tgtaaattatggttattctaaaagttgtcaaccaaatagttgttcaaataacact 7472919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 36885434 - 36885376
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||||| | | |||||||| |||||||| |||||||||| |||||||||    
T  36885434 tgtaaattatggttgtcccataagttgtccaccaaatggttgttcaaataacactcctc 36885376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 37597363 - 37597420
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcct 58  Q
    ||||||||||||||||  || ||||||||||| | |||||||||||||| ||||||||    
T  37597363 tgtaaattatggttgtcttataagttgtcaactatatgattgttcaaataacactcct 37597420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 36568086 - 36568142
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcc 57  Q
    |||||||||||||||| | | |||||||||| |||||| |||||||||| |||||||    
T  36568086 tgtaaattatggttgtcccataagttgtcaatcaaatggttgttcaaataacactcc 36568142  T

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Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4658200 - 4658145
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactc 56  Q
    |||||||||||||||| ||| ||||||||||  ||||| |||||||||| ||||||    
T  4658200 tgtaaattatggttgtcctaaaagttgtcaattaaatggttgttcaaataacactc 4658145  T

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Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 12707275 - 12707333
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||||| | | ||||  ||||||||||| |||||||||| |||||||||    
T  12707275 tgtaaattatggttgtcccataagtgctcaaccaaatggttgttcaaataacactcctc 12707333  T

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Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 16872102 - 16872044
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||||| | | ||||||| ||||||||| |||||||||| || ||||||    
T  16872102 tgtaaattatggttgtcccaaaagttgttaaccaaatggttgttcaaataaccctcctc 16872044  T

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Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 30439452 - 30439394
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    ||||||||||||||||   | ||||| ||||||||||| |||||||||| |||||||||    
T  30439452 tgtaaattatggttgtcacataagttatcaaccaaatggttgttcaaataacactcctc 30439394  T

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Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 34018933 - 34018994
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctcata 62  Q
    |||||||||||||||| |   ||||||| ||||||||| ||| |||||| ||||||||||||    
T  34018933 tgtaaattatggttgtcccgaaagttgttaaccaaatggttgatcaaataacactcctcata 34018994  T

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Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 41541984 - 41542029
Alignment:
Q  3 taaattatggttgttctagaagttgtcaaccaaatgattgttcaaa 48  Q
    |||||||||||||| | | ||||||||||||||||| |||||||||    
T  41541984 taaattatggttgtcccataagttgtcaaccaaatggttgttcaaa 41542029  T

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Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 42569673 - 42569617
Alignment:
Q  3 taaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||||||| ||| || || ||||||||||| |||||||||| | |||||||    
T  42569673 taaattatggttgtcctaaaaattatcaaccaaatggttgttcaaataatactcctc 42569617  T

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Target: scaffold0141 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 12057 - 12115
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    ||||||||||||||||   | ||||||||||||||||  |||||||||| |||||||||    
T  12057 tgtaaattatggttgtcgcaaaagttgtcaaccaaatagttgttcaaataacactcctc 12115  T

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Target: scaffold0136 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 38550 - 38608
Alignment:
Q  1 tgtaaattatggttgttctagaagttgtcaaccaaatgattgttcaaatgacactcctc 59  Q
    |||||||||| ||||| | | ||||||||||| ||||| |||||||||| |||||||||    
T  38550 tgtaaattatagttgtcccaaaagttgtcaactaaatggttgttcaaataacactcctc 38608  T

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