View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15042_low_30 (Length: 235)
Name: NF15042_low_30
Description: NF15042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15042_low_30 |
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Alignment Details
Target: chr1 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 6 - 221
Target Start/End: Original strand, 6945094 - 6945309
Alignment:
| Q |
6 |
tgtcaaattccatctctaagggtattgttttgagttgacacacaattagttggaaagaaaaaatcaaaacagatgatacttatactactttggtttatta |
105 |
Q |
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| T |
6945094 |
tgtcaaattccatctctaagggtattgttttgagttgacacacaattagttggaaagaaaaaatcaaaacagatgatacttatactactttggtttatta |
6945193 |
T |
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| Q |
106 |
aaattgtctttattctttgatttatttgtgatttgaaaaactgaaacaattattattttttccttaatttcccttgttacaaacctctattcatcaatca |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6945194 |
aaattgtctttattctttgatttatttgtgatttgaaaaactgaaacaattattattttttccttaatttcccttgttacaaacctctattcatcaatca |
6945293 |
T |
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| Q |
206 |
aaatacaggttcttat |
221 |
Q |
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|||||||||||||||| |
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| T |
6945294 |
aaatacaggttcttat |
6945309 |
T |
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