View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15043_low_2 (Length: 257)
Name: NF15043_low_2
Description: NF15043
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15043_low_2 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 17 - 257
Target Start/End: Original strand, 23118676 - 23118916
Alignment:
| Q |
17 |
cataagtatcatattgaatttgattaaaaaacttattcactgaatctggtttgaataatttagaaaagttgtgttttggtggtgagatgaatagatgaga |
116 |
Q |
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| T |
23118676 |
cataagtatcatattgaatttgattaaaaaacttattcactgaatctggtttgaataatttagaaaagttgtgttttggtggtgagatgaatagatgaga |
23118775 |
T |
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| Q |
117 |
caacttagtaacctgttgggttgtgaaagggtgtgatgttaagctcttaagcacatcactggcttcttgagcagaaaaggcagcatattgatttccaaag |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
23118776 |
caacttagtaacctgttgggttgtgaaagggtgtgatgtgaagctcttaagcacatcactggctttttgagcagaaaaggcagcatattgatttccaaag |
23118875 |
T |
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| Q |
217 |
tcttcaagcagttgttgatactcctaaagaatcggagatcg |
257 |
Q |
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| T |
23118876 |
tcttcaagcagttgttgatactcctaaagaatcggagatcg |
23118916 |
T |
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