View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15046_low_11 (Length: 257)
Name: NF15046_low_11
Description: NF15046
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15046_low_11 |
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Alignment Details
Target: chr3 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 17 - 238
Target Start/End: Complemental strand, 31384729 - 31384508
Alignment:
| Q |
17 |
taacattaaacagtacaagattacagaggtttgcaaaaccagggaagggaagagaaaatccacaatacacatttctaagcttccaagttagcttaccaca |
116 |
Q |
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| T |
31384729 |
taacattaaacagtacaagattacagaggtttgcaaaaccagggaagggaagagaaaatccacaatacacatttctaagcttccaagttagcttaccaca |
31384630 |
T |
|
| Q |
117 |
atatcatcatcatgcaaggaacagaccaataactgaacacttaatgcaaggaacagaccaataactaatcacttaatatatgcagaactagaaagtataa |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31384629 |
atatcatcatcatgcaaggaacagaccaataactgaacacttaatgcaaggaacagaccaataactaatcacttaatatatgcagaactagaaagtataa |
31384530 |
T |
|
| Q |
217 |
ttattaaataaaaacaacatga |
238 |
Q |
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|||||||||||||||||||||| |
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| T |
31384529 |
ttattaaataaaaacaacatga |
31384508 |
T |
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