View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15048_high_20 (Length: 239)
Name: NF15048_high_20
Description: NF15048
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15048_high_20 |
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Alignment Details
Target: chr7 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 7753927 - 7753719
Alignment:
| Q |
1 |
aagtgaacattttctaacacacacttgctatgccacgaaagattataagcatttgaaattggaataaccggcataatcatttttaagatttttaatcttg |
100 |
Q |
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| T |
7753927 |
aagtgaacattttctaacacacacttgctataccacgaaagattataagcatttgaaattggaataaccggcataatca-ttttaagatttttaatcttg |
7753829 |
T |
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| Q |
101 |
agagtaagttgtgttcaacgatggattaattttatatttatttgtgtttatataagtggagagt-aaaaatgtataagttgaaattgacttctacttggt |
199 |
Q |
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|||||||||||||||||| | | ||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |
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| T |
7753828 |
agagtaagttgtgttcaaggtttgattaat----------------tttatataagtagagagtaaaaaatgtataagttgaaattgacttctacttggt |
7753745 |
T |
|
| Q |
200 |
ggttatctcatcgttacctttaaaat |
225 |
Q |
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|||||||||||||||||||||||||| |
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| T |
7753744 |
ggttatctcatcgttacctttaaaat |
7753719 |
T |
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