View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15048_low_14 (Length: 333)
Name: NF15048_low_14
Description: NF15048
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15048_low_14 |
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Alignment Details
Target: chr3 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 34 - 315
Target Start/End: Original strand, 35288741 - 35289022
Alignment:
| Q |
34 |
gtctttgtttgttttgttcattcatttttcatgaacatcaacaaatgtgttaatttcatttgaagattttgattatgtgaagaattgttttacaagtaat |
133 |
Q |
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| T |
35288741 |
gtctttgtttgttttgttcattcatttttcatgaacatcaacaaatgtgttaatttcatttgaagattttgattatgtgaagaattgttttacaagtaat |
35288840 |
T |
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| Q |
134 |
ggactaattggtgcatgcatgtgtgaggttttcaagcatcttttgcatttgtttagagatacagtagaatgatatttgtttttccttttaggctatggga |
233 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35288841 |
ggactaattggtgcatgcatgtgtgaggttttcaagcatcttttgcatttgtttaaagatacagtagaatgatatttgtttttccttttaggctatggga |
35288940 |
T |
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| Q |
234 |
agaattcatgctattctatcagacggaactgtcgtcaccgatgtcgaagtatggcttcttttctgatcttctttaataacct |
315 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35288941 |
agaattcatgctattctatcagatggaactgtcgtcaccgatgtcgaagtatggcttcttttctgatcttctttaataacct |
35289022 |
T |
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