View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15048_low_20 (Length: 248)
Name: NF15048_low_20
Description: NF15048
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15048_low_20 |
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Alignment Details
Target: chr6 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 4 - 231
Target Start/End: Complemental strand, 7897748 - 7897521
Alignment:
| Q |
4 |
tttaagaggctcgttttccaaccacgcttcattccaaaaggaaatctccaagccattagcaaccggactttgaaccaaataactaggatatttattacca |
103 |
Q |
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| T |
7897748 |
tttaagaggctcgttttccaaccacgcttcattccaaaaggaaatctccaagccattagcaaccggactttgaaccaaataactaggatatttattacca |
7897649 |
T |
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| Q |
104 |
agtagtgacaaagagtggattcagaaatcttaatcttttttagttttaacatcctattaaacccannnnnnngaagaagcccggtaccaccaatttgatt |
203 |
Q |
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| T |
7897648 |
agtagtgacaaagagtggattcagaaatcttaatcttttttacttttaacatcctattaaacccatttttttgaagaagcccggtaccaccaatttgatt |
7897549 |
T |
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| Q |
204 |
tctcgatttacaaaatcattcaccaaac |
231 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
7897548 |
tctcgatttacaaaatcattcaccaaac |
7897521 |
T |
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