View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1504R-Insertion-15 (Length: 366)

Name: NF1504R-Insertion-15
Description: NF1504R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1504R-Insertion-15
NF1504R-Insertion-15
[»] scaffold1432 (1 HSPs)
scaffold1432 (9-304)||(799-1085)
[»] chr8 (67 HSPs)
chr8 (152-268)||(32884526-32884642)
chr8 (152-267)||(32879693-32879808)
chr8 (296-366)||(28192149-28192219)
chr8 (301-366)||(2944246-2944311)
chr8 (301-366)||(44251095-44251160)
chr8 (302-366)||(51069-51133)
chr8 (296-340)||(9035539-9035583)
chr8 (301-340)||(1774340-1774379)
chr8 (303-366)||(8251907-8251970)
chr8 (303-366)||(13153928-13153991)
chr8 (303-366)||(18754144-18754207)
chr8 (168-280)||(28883671-28883779)
chr8 (187-234)||(31599874-31599921)
chr8 (303-366)||(32675731-32675794)
chr8 (303-366)||(34490517-34490580)
chr8 (303-365)||(8951403-8951465)
chr8 (168-230)||(30525219-30525281)
chr8 (302-340)||(39029177-39029215)
chr8 (301-339)||(41014502-41014540)
chr8 (308-366)||(44580853-44580911)
chr8 (301-366)||(8948325-8948390)
chr8 (303-340)||(28572046-28572083)
chr8 (303-340)||(28579639-28579676)
chr8 (303-340)||(34568490-34568527)
chr8 (301-366)||(36177077-36177142)
chr8 (303-340)||(36786467-36786504)
chr8 (297-334)||(38183571-38183608)
chr8 (303-340)||(40784891-40784928)
chr8 (303-335)||(26990567-26990599)
chr8 (303-366)||(2152214-2152277)
chr8 (303-366)||(5162304-5162367)
chr8 (303-366)||(11798605-11798668)
chr8 (303-366)||(18455720-18455783)
chr8 (303-366)||(26016569-26016632)
chr8 (303-366)||(38878721-38878784)
chr8 (303-366)||(40741265-40741328)
chr8 (303-366)||(42885054-42885117)
chr8 (303-365)||(7758884-7758946)
chr8 (240-282)||(12704217-12704259)
chr8 (303-337)||(17856779-17856813)
chr8 (302-340)||(18641380-18641418)
chr8 (303-365)||(26625793-26625855)
chr8 (303-365)||(29598224-29598286)
chr8 (303-337)||(36408415-36408449)
chr8 (303-365)||(43654178-43654240)
chr8 (301-339)||(44502618-44502656)
chr8 (303-340)||(4631555-4631592)
chr8 (303-340)||(5593421-5593458)
chr8 (303-340)||(5784148-5784185)
chr8 (303-336)||(11798869-11798902)
chr8 (303-340)||(12802611-12802648)
chr8 (303-336)||(13154192-13154225)
chr8 (174-223)||(13532897-13532946)
chr8 (174-223)||(13622437-13622486)
chr8 (303-340)||(17069844-17069881)
chr8 (303-340)||(17578392-17578429)
chr8 (303-336)||(29279460-29279493)
chr8 (303-340)||(33980465-33980502)
chr8 (303-340)||(40529307-40529344)
chr8 (303-336)||(40530410-40530443)
chr8 (303-336)||(40741528-40741561)
chr8 (303-336)||(43653943-43653976)
chr8 (303-336)||(44250859-44250892)
chr8 (302-338)||(6050557-6050593)
chr8 (296-328)||(12255089-12255121)
chr8 (296-328)||(12260632-12260664)
chr8 (301-337)||(16998994-16999030)
[»] chr4 (81 HSPs)
chr4 (151-277)||(55240381-55240505)
chr4 (155-282)||(55240576-55240703)
chr4 (191-283)||(11784976-11785068)
chr4 (303-366)||(1859144-1859207)
chr4 (301-340)||(25708678-25708717)
chr4 (301-366)||(47806858-47806923)
chr4 (305-366)||(54676549-54676610)
chr4 (302-366)||(5743633-5743697)
chr4 (302-366)||(34273193-34273257)
chr4 (168-280)||(36165468-36165580)
chr4 (301-365)||(52977980-52978044)
chr4 (303-366)||(4035825-4035888)
chr4 (303-366)||(5375531-5375594)
chr4 (301-340)||(30771526-30771565)
chr4 (303-366)||(45742780-45742843)
chr4 (174-232)||(18523225-18523283)
chr4 (296-366)||(36990907-36990977)
chr4 (167-220)||(4316018-4316071)
chr4 (303-340)||(9328240-9328277)
chr4 (303-340)||(32032993-32033030)
chr4 (303-340)||(33413518-33413555)
chr4 (301-366)||(43387967-43388032)
chr4 (303-340)||(44294789-44294826)
chr4 (296-336)||(625970-626010)
chr4 (298-366)||(2615919-2615987)
chr4 (152-280)||(23564272-23564400)
chr4 (303-339)||(26626003-26626039)
chr4 (187-227)||(34542405-34542445)
chr4 (301-337)||(35675923-35675959)
chr4 (303-366)||(4415965-4416028)
chr4 (301-336)||(4549627-4549662)
chr4 (303-366)||(6753525-6753588)
chr4 (168-219)||(18523024-18523075)
chr4 (309-340)||(18882357-18882388)
chr4 (303-366)||(24754078-24754141)
chr4 (303-366)||(28501360-28501423)
chr4 (296-339)||(29427486-29427529)
chr4 (303-366)||(29520138-29520201)
chr4 (303-366)||(31937076-31937139)
chr4 (303-366)||(36391854-36391917)
chr4 (303-366)||(39797434-39797497)
chr4 (303-366)||(46481363-46481426)
chr4 (303-366)||(48030313-48030376)
chr4 (301-340)||(49373693-49373732)
chr4 (301-340)||(51536168-51536207)
chr4 (301-340)||(53277185-53277224)
chr4 (301-340)||(53564356-53564395)
chr4 (202-280)||(1460406-1460483)
chr4 (303-365)||(6807429-6807491)
chr4 (302-340)||(15241479-15241517)
chr4 (303-337)||(20391440-20391474)
chr4 (302-336)||(29014063-29014097)
chr4 (302-340)||(47228728-47228766)
chr4 (301-339)||(55563128-55563166)
chr4 (303-336)||(4036089-4036122)
chr4 (303-336)||(5743399-5743432)
chr4 (301-334)||(6629478-6629511)
chr4 (303-340)||(8343908-8343945)
chr4 (151-219)||(9928964-9929033)
chr4 (303-340)||(17610020-17610057)
chr4 (303-340)||(20455181-20455218)
chr4 (303-336)||(20747434-20747467)
chr4 (303-340)||(25124246-25124283)
chr4 (303-336)||(39144668-39144701)
chr4 (303-340)||(45097165-45097202)
chr4 (296-365)||(45921424-45921493)
chr4 (303-340)||(46949992-46950029)
chr4 (303-340)||(49793091-49793128)
chr4 (303-340)||(50533884-50533921)
chr4 (303-340)||(52870644-52870681)
chr4 (303-340)||(53629792-53629829)
chr4 (303-336)||(55631999-55632032)
chr4 (303-340)||(56432518-56432555)
chr4 (301-337)||(7698472-7698508)
chr4 (303-339)||(24073127-24073163)
chr4 (296-340)||(30868801-30868845)
chr4 (303-339)||(32899219-32899255)
chr4 (151-231)||(41389425-41389505)
chr4 (308-340)||(41620519-41620551)
chr4 (163-231)||(44019610-44019678)
chr4 (301-337)||(54878018-54878054)
[»] chr1 (56 HSPs)
chr1 (151-228)||(35536769-35536846)
chr1 (301-366)||(15811206-15811271)
chr1 (301-366)||(30290263-30290328)
chr1 (301-366)||(49907019-49907084)
chr1 (301-340)||(943637-943676)
chr1 (303-366)||(1039355-1039418)
chr1 (303-366)||(1046261-1046324)
chr1 (303-366)||(4102688-4102751)
chr1 (303-366)||(11741397-11741460)
chr1 (303-366)||(23541979-23542042)
chr1 (303-366)||(36694854-36694917)
chr1 (303-366)||(36710955-36711018)
chr1 (303-366)||(37951923-37951986)
chr1 (301-340)||(39363194-39363233)
chr1 (303-366)||(39497433-39497496)
chr1 (301-340)||(44649627-44649666)
chr1 (303-366)||(45039412-45039475)
chr1 (303-366)||(46075841-46075904)
chr1 (303-366)||(52431148-52431211)
chr1 (169-219)||(12178099-12178149)
chr1 (304-366)||(30289836-30289898)
chr1 (151-280)||(10645545-10645674)
chr1 (191-232)||(10645788-10645829)
chr1 (302-366)||(16456635-16456699)
chr1 (301-340)||(14171540-14171579)
chr1 (303-366)||(27037269-27037332)
chr1 (151-214)||(31061253-31061316)
chr1 (301-336)||(39497697-39497732)
chr1 (303-366)||(41855447-41855510)
chr1 (301-336)||(44646535-44646570)
chr1 (301-336)||(44649893-44649928)
chr1 (303-366)||(52601991-52602054)
chr1 (171-269)||(3142897-3142995)
chr1 (306-340)||(13343776-13343810)
chr1 (303-337)||(38920239-38920273)
chr1 (302-340)||(45335884-45335922)
chr1 (303-336)||(1047992-1048025)
chr1 (303-340)||(7763749-7763786)
chr1 (303-340)||(7783991-7784028)
chr1 (303-336)||(9202245-9202278)
chr1 (303-336)||(23542243-23542276)
chr1 (303-340)||(25509209-25509246)
chr1 (303-336)||(39362934-39362967)
chr1 (303-336)||(39750121-39750154)
chr1 (303-340)||(39750381-39750418)
chr1 (303-340)||(42276161-42276198)
chr1 (301-366)||(42872308-42872373)
chr1 (303-340)||(43456621-43456658)
chr1 (303-340)||(50008483-50008520)
chr1 (303-340)||(50937779-50937816)
chr1 (168-228)||(3371645-3371705)
chr1 (301-337)||(21631110-21631146)
chr1 (190-226)||(28843244-28843280)
chr1 (301-337)||(36695118-36695154)
chr1 (301-337)||(36711219-36711255)
chr1 (301-337)||(44646269-44646305)
[»] chr3 (74 HSPs)
chr3 (151-274)||(30135500-30135623)
chr3 (151-274)||(30141629-30141752)
chr3 (151-274)||(30145051-30145174)
chr3 (295-366)||(21756478-21756549)
chr3 (303-366)||(23700759-23700822)
chr3 (303-366)||(23719214-23719277)
chr3 (303-366)||(23737670-23737733)
chr3 (301-366)||(14428608-14428673)
chr3 (151-244)||(30130780-30130873)
chr3 (303-366)||(7181350-7181413)
chr3 (303-366)||(9499471-9499534)
chr3 (301-340)||(10220931-10220970)
chr3 (187-282)||(11047444-11047539)
chr3 (303-366)||(12683156-12683219)
chr3 (303-366)||(22103903-22103966)
chr3 (303-366)||(25149096-25149159)
chr3 (302-365)||(26593740-26593803)
chr3 (303-366)||(35868057-35868120)
chr3 (303-366)||(37728713-37728776)
chr3 (303-366)||(43868103-43868166)
chr3 (303-366)||(44543782-44543845)
chr3 (303-366)||(45252773-45252836)
chr3 (301-340)||(46049986-46050025)
chr3 (302-365)||(49127173-49127236)
chr3 (303-365)||(53361830-53361892)
chr3 (302-339)||(4024051-4024088)
chr3 (303-340)||(12050392-12050429)
chr3 (171-228)||(36236576-36236632)
chr3 (151-228)||(50196900-50196977)
chr3 (173-282)||(50197098-50197207)
chr3 (303-340)||(51284062-51284099)
chr3 (296-340)||(36098959-36099003)
chr3 (303-366)||(7051694-7051757)
chr3 (303-366)||(8321925-8321988)
chr3 (301-336)||(9779977-9780012)
chr3 (303-366)||(20862196-20862259)
chr3 (303-366)||(26058546-26058609)
chr3 (303-366)||(26221288-26221351)
chr3 (303-366)||(33868448-33868511)
chr3 (303-366)||(46845466-46845529)
chr3 (303-366)||(46878413-46878476)
chr3 (303-366)||(47066934-47066997)
chr3 (303-366)||(50647918-50647981)
chr3 (303-366)||(54782891-54782954)
chr3 (303-365)||(43701178-43701240)
chr3 (308-366)||(46703032-46703090)
chr3 (296-366)||(47008476-47008546)
chr3 (302-336)||(52058984-52059018)
chr3 (303-336)||(4024315-4024348)
chr3 (303-340)||(4759351-4759388)
chr3 (303-336)||(14428873-14428906)
chr3 (303-336)||(16434977-16435010)
chr3 (303-340)||(17699031-17699068)
chr3 (303-336)||(20862461-20862494)
chr3 (303-340)||(22832607-22832644)
chr3 (303-340)||(24087335-24087372)
chr3 (303-340)||(26306607-26306644)
chr3 (303-336)||(26806115-26806148)
chr3 (303-336)||(31531415-31531448)
chr3 (303-340)||(32963105-32963142)
chr3 (303-336)||(33868712-33868745)
chr3 (305-334)||(35711278-35711307)
chr3 (303-336)||(36005768-36005801)
chr3 (303-340)||(41392880-41392917)
chr3 (301-366)||(45048996-45049061)
chr3 (303-336)||(50647684-50647717)
chr3 (303-340)||(50726783-50726820)
chr3 (303-340)||(50786028-50786065)
chr3 (303-336)||(53271855-53271888)
chr3 (308-340)||(20918224-20918256)
chr3 (308-340)||(20927186-20927218)
chr3 (187-227)||(20995747-20995787)
chr3 (296-340)||(33212390-33212434)
chr3 (308-340)||(33976508-33976540)
[»] chr7 (48 HSPs)
chr7 (156-228)||(23972462-23972534)
chr7 (303-340)||(44547426-44547463)
chr7 (164-276)||(2911964-2912076)
chr7 (168-228)||(8745877-8745937)
chr7 (301-365)||(39197716-39197780)
chr7 (303-366)||(21295151-21295214)
chr7 (301-340)||(26255094-26255133)
chr7 (303-366)||(29286011-29286074)
chr7 (303-366)||(32814433-32814496)
chr7 (303-366)||(33858840-33858903)
chr7 (303-366)||(38858298-38858361)
chr7 (303-366)||(39871587-39871650)
chr7 (303-366)||(41026070-41026133)
chr7 (303-366)||(41252335-41252398)
chr7 (301-339)||(40300228-40300266)
chr7 (303-340)||(7449270-7449307)
chr7 (303-340)||(19920563-19920600)
chr7 (301-366)||(31457995-31458060)
chr7 (303-340)||(32872375-32872412)
chr7 (303-340)||(36698131-36698168)
chr7 (301-366)||(44510317-44510382)
chr7 (303-340)||(48521029-48521066)
chr7 (301-337)||(32759554-32759590)
chr7 (296-336)||(38428411-38428451)
chr7 (303-366)||(29177226-29177289)
chr7 (303-366)||(34979051-34979114)
chr7 (190-229)||(35035249-35035288)
chr7 (303-366)||(36646611-36646674)
chr7 (303-337)||(35888312-35888346)
chr7 (302-340)||(41003154-41003192)
chr7 (303-340)||(2290016-2290053)
chr7 (303-336)||(20075111-20075144)
chr7 (303-336)||(21295415-21295448)
chr7 (303-340)||(25247690-25247727)
chr7 (303-340)||(25950831-25950868)
chr7 (303-336)||(28060981-28061014)
chr7 (303-340)||(31803120-31803157)
chr7 (303-340)||(34012517-34012554)
chr7 (303-340)||(36711298-36711335)
chr7 (303-340)||(38736451-38736488)
chr7 (303-340)||(46148431-46148468)
chr7 (303-340)||(46415005-46415042)
chr7 (168-280)||(5473286-5473398)
chr7 (296-340)||(17878360-17878404)
chr7 (240-280)||(29155802-29155842)
chr7 (308-340)||(31769332-31769364)
chr7 (303-339)||(33381574-33381610)
chr7 (308-340)||(41787255-41787287)
[»] chr6 (35 HSPs)
chr6 (303-366)||(9388765-9388828)
chr6 (168-230)||(10742249-10742311)
chr6 (303-340)||(287414-287451)
chr6 (303-340)||(5457412-5457449)
chr6 (303-340)||(33487833-33487870)
chr6 (302-366)||(12106038-12106102)
chr6 (302-366)||(34301806-34301870)
chr6 (303-366)||(30248647-30248710)
chr6 (302-340)||(231105-231143)
chr6 (302-336)||(6418135-6418169)
chr6 (303-340)||(4844400-4844437)
chr6 (303-340)||(8743188-8743225)
chr6 (301-337)||(11847835-11847871)
chr6 (303-366)||(402595-402658)
chr6 (301-340)||(925933-925972)
chr6 (305-340)||(6417878-6417913)
chr6 (303-366)||(9038642-9038705)
chr6 (303-338)||(23398141-23398176)
chr6 (303-366)||(25045617-25045680)
chr6 (152-267)||(27134291-27134406)
chr6 (302-340)||(2090657-2090695)
chr6 (152-226)||(11340005-11340079)
chr6 (303-336)||(9388529-9388562)
chr6 (303-340)||(10195993-10196030)
chr6 (303-340)||(13901641-13901678)
chr6 (303-340)||(15498629-15498666)
chr6 (303-340)||(19097801-19097838)
chr6 (303-336)||(23397879-23397912)
chr6 (303-340)||(23604460-23604497)
chr6 (303-340)||(25197152-25197189)
chr6 (303-336)||(34741730-34741763)
chr6 (303-340)||(34915543-34915580)
chr6 (303-335)||(12144043-12144075)
chr6 (303-339)||(13648130-13648166)
chr6 (308-340)||(17227527-17227559)
[»] chr2 (50 HSPs)
chr2 (303-366)||(5664638-5664701)
chr2 (301-366)||(2438223-2438288)
chr2 (303-340)||(25624733-25624770)
chr2 (301-366)||(39833973-39834038)
chr2 (302-366)||(8716866-8716930)
chr2 (302-366)||(27560205-27560269)
chr2 (176-228)||(43829620-43829672)
chr2 (302-365)||(7491843-7491906)
chr2 (303-366)||(34883822-34883885)
chr2 (303-366)||(36131002-36131065)
chr2 (303-366)||(40607702-40607765)
chr2 (303-340)||(8990204-8990241)
chr2 (301-334)||(10757984-10758017)
chr2 (303-340)||(11201683-11201720)
chr2 (303-340)||(17408294-17408331)
chr2 (303-340)||(20252210-20252247)
chr2 (301-366)||(23788967-23789032)
chr2 (303-340)||(34062665-34062702)
chr2 (303-340)||(41450516-41450553)
chr2 (302-366)||(8912848-8912912)
chr2 (301-337)||(34113789-34113825)
chr2 (301-336)||(2438489-2438524)
chr2 (303-366)||(8841631-8841694)
chr2 (303-366)||(15228123-15228186)
chr2 (303-366)||(16805765-16805828)
chr2 (309-340)||(17665529-17665560)
chr2 (301-336)||(22897655-22897690)
chr2 (303-366)||(34113531-34113594)
chr2 (303-366)||(37229440-37229503)
chr2 (303-366)||(40680727-40680790)
chr2 (303-365)||(26322268-26322330)
chr2 (303-337)||(29830757-29830791)
chr2 (302-336)||(45474350-45474384)
chr2 (303-340)||(2060316-2060353)
chr2 (303-340)||(4711728-4711765)
chr2 (303-340)||(7116299-7116336)
chr2 (303-336)||(7492108-7492141)
chr2 (303-336)||(16108215-16108248)
chr2 (303-340)||(16845072-16845109)
chr2 (303-340)||(22897391-22897428)
chr2 (303-340)||(28566151-28566188)
chr2 (190-219)||(30841581-30841610)
chr2 (152-229)||(35469415-35469492)
chr2 (303-336)||(39833739-39833772)
chr2 (296-340)||(10399462-10399506)
chr2 (301-337)||(18374707-18374743)
chr2 (303-335)||(22182929-22182961)
chr2 (301-337)||(24345681-24345717)
chr2 (301-329)||(29239331-29239359)
chr2 (305-337)||(42629373-42629405)
[»] scaffold0236 (1 HSPs)
scaffold0236 (169-267)||(22367-22465)
[»] chr5 (40 HSPs)
chr5 (296-366)||(43060385-43060455)
chr5 (301-366)||(1265947-1266012)
chr5 (152-265)||(28431955-28432068)
chr5 (303-340)||(32147294-32147331)
chr5 (303-366)||(6673202-6673265)
chr5 (303-366)||(9828393-9828456)
chr5 (303-366)||(16127259-16127322)
chr5 (303-366)||(22527692-22527755)
chr5 (303-366)||(40004383-40004446)
chr5 (171-277)||(8402141-8402247)
chr5 (303-340)||(5527974-5528011)
chr5 (302-339)||(7951561-7951598)
chr5 (303-340)||(14913648-14913685)
chr5 (301-366)||(23286448-23286513)
chr5 (303-340)||(26894873-26894910)
chr5 (306-366)||(4985090-4985150)
chr5 (301-337)||(10734526-10734562)
chr5 (303-335)||(13661124-13661156)
chr5 (303-339)||(34662204-34662240)
chr5 (303-366)||(3497774-3497837)
chr5 (309-340)||(4194688-4194719)
chr5 (302-337)||(14570893-14570928)
chr5 (303-366)||(15190789-15190852)
chr5 (303-366)||(16153229-16153292)
chr5 (303-366)||(41641095-41641158)
chr5 (303-365)||(3028013-3028075)
chr5 (303-337)||(9020694-9020728)
chr5 (301-339)||(19571940-19571978)
chr5 (308-366)||(31642192-31642250)
chr5 (303-336)||(186362-186395)
chr5 (167-228)||(6423984-6424045)
chr5 (303-340)||(8949812-8949849)
chr5 (303-336)||(9828657-9828690)
chr5 (303-340)||(13862995-13863032)
chr5 (303-340)||(15521942-15521979)
chr5 (303-340)||(16440931-16440968)
chr5 (303-340)||(23260138-23260175)
chr5 (303-340)||(25601060-25601097)
chr5 (303-340)||(41384172-41384209)
chr5 (303-339)||(32964133-32964169)
[»] scaffold0025 (2 HSPs)
scaffold0025 (303-340)||(65637-65674)
scaffold0025 (302-336)||(65377-65411)
[»] scaffold0012 (1 HSPs)
scaffold0012 (303-365)||(47640-47702)
[»] scaffold0604 (2 HSPs)
scaffold0604 (303-340)||(3782-3819)
scaffold0604 (296-337)||(3518-3559)
[»] scaffold0557 (1 HSPs)
scaffold0557 (167-228)||(3924-3985)
[»] scaffold0442 (2 HSPs)
scaffold0442 (167-228)||(1547-1608)
scaffold0442 (167-228)||(7662-7723)
[»] scaffold0122 (1 HSPs)
scaffold0122 (303-340)||(12065-12102)
[»] scaffold0029 (1 HSPs)
scaffold0029 (303-340)||(51682-51719)
[»] scaffold0008 (1 HSPs)
scaffold0008 (303-340)||(259122-259159)
[»] scaffold0674 (1 HSPs)
scaffold0674 (301-340)||(5149-5188)
[»] scaffold0549 (3 HSPs)
scaffold0549 (301-340)||(10182-10221)
scaffold0549 (152-226)||(1104-1178)
scaffold0549 (152-226)||(3194-3268)
[»] scaffold0308 (1 HSPs)
scaffold0308 (303-366)||(14322-14385)
[»] scaffold0240 (1 HSPs)
scaffold0240 (301-340)||(18495-18534)
[»] scaffold0161 (1 HSPs)
scaffold0161 (301-340)||(3436-3475)
[»] scaffold0047 (1 HSPs)
scaffold0047 (303-334)||(61857-61888)
[»] scaffold0339 (1 HSPs)
scaffold0339 (302-340)||(7140-7178)
[»] scaffold0107 (1 HSPs)
scaffold0107 (302-340)||(48653-48691)
[»] scaffold0039 (1 HSPs)
scaffold0039 (302-340)||(104061-104099)
[»] scaffold0002 (1 HSPs)
scaffold0002 (303-337)||(355334-355368)
[»] scaffold0368 (1 HSPs)
scaffold0368 (301-366)||(8216-8281)


Alignment Details
Target: scaffold1432 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: scaffold1432
Description:

Target: scaffold1432; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 9 - 304
Target Start/End: Original strand, 799 - 1085
Alignment:
Q  9 aataaaatttaaaaacatgattaaaacgagaagttattttgaatagtttttaataaaaatgcaacttcaaggaggaggtgatttatggtaaatgggccgc 108  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||         |    
T  799 aataaaatttaaaaacatgattaaaatgagaagttgttttgaatagtttttaataaaaatgcaacttcaaggaggaggtgatttatggta---------c 889  T
Q  109 ttaaatctcttctcaaaatgcggcttgaagtggatgtgatttatgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaa 208  Q
    ||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  890 ttaaatctcttctcaaaatgcagcttcaagaggatgtgatttatgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaa 989  T
Q  209 acatatttatacattcaacaacccatgatcctgagcgatatgagactaacaacaaactacaaataacttcaacaatgtaatcgagcgaaaacatta 304  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  990 acatatttatacattcaacaacctatgatcctgagcgatatgagactaacaacaaactacaaacaacttcaacaatgtaatcgagcgaaaacatta 1085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 268
Target Start/End: Original strand, 32884526 - 32884642
Alignment:
Q  152 tgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatga 251  Q
    |||||||||| ||| ||| ||||||||||| || ||| |||||||||||||||||||||||||||| ||| |  ||| ||||||| ||||||| || |||    
T  32884526 tgttaaatagtcttgaatttcatcccaaaaactaacttaaaggatgaggatactcaaacatatttaaacacttgacatcccatgaacctgagcaatgtga 32884625  T
Q  252 gactaacaacaaactac 268  Q
    ||| || ||||||||||    
T  32884626 gacaaataacaaactac 32884642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 152 - 267
Target Start/End: Original strand, 32879693 - 32879808
Alignment:
Q  152 tgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatga 251  Q
    |||||||||| ||| ||||||||||||||| || ||| ||||||||||| ||||| |||||||||| ||| |  ||| ||||||| ||||| | || |||    
T  32879693 tgttaaatagtcttgaatctcatcccaaaaactaacttaaaggatgagggtactcgaacatatttaaacacttgacatcccatgaacctgaacaatgtga 32879792  T
Q  252 gactaacaacaaacta 267  Q
    ||| || |||||||||    
T  32879793 gacaaataacaaacta 32879808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 296 - 366
Target Start/End: Complemental strand, 28192219 - 28192149
Alignment:
Q  296 aaaacattactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||| |||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  28192219 aaaatattactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 28192149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 2944311 - 2944246
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  2944311 attactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 2944246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 44251160 - 44251095
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  44251160 attactccctccgtccctaattataagaccattttgagaattttttttgtccctttttataagacc 44251095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 302 - 366
Target Start/End: Complemental strand, 51133 - 51069
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    ||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  51133 ttactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 51069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 340
Target Start/End: Complemental strand, 9035583 - 9035539
Alignment:
Q  296 aaaacattactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| |||||||||||||||||||||||||||||| |||||||||    
T  9035583 aaaaaattactccctccgtccctaattataagaccattttgagaa 9035539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 1774340 - 1774379
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  1774340 attactccctccgtccctaattataagacccttttgagaa 1774379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 8251970 - 8251907
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  8251970 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 8251907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 13153928 - 13153991
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  13153928 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 13153991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 18754144 - 18754207
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  18754144 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 18754207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 280
Target Start/End: Original strand, 28883671 - 28883779
Alignment:
Q  168 atctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatgagactaacaacaaacta 267  Q
    |||||||| ||||||||  |||  || |||||| |||||||||||||||||||| | ||||||||   | |||||||    || ||||||||||||||||    
T  28883671 atctcatctcaaaagctacctcggagaatgagggtactcaaacatatttatacacttaacaacccgaaaacctgagc----tgggactaacaacaaacta 28883766  T
Q  268 caaataacttcaa 280  Q
    |||| ||||||||    
T  28883767 caaacaacttcaa 28883779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 31599921 - 31599874
Alignment:
Q  187 ctcaaaggatgaggatactcaaacatatttatacattcaacaacccat 234  Q
    ||||||||||||   |||||||||||||||||||||||||||||||||    
T  31599921 ctcaaaggatgaaagtactcaaacatatttatacattcaacaacccat 31599874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 32675794 - 32675731
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  32675794 tactccctccgtccctaattataagacccttttgagaaaaaaatttgtccctttttataagacc 32675731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 34490517 - 34490580
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||| |||||||||||        ||||||||||||||||||    
T  34490517 tactccctccgtccctaattataagatctttttgagaattttttttgtccctttttataagacc 34490580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 365
Target Start/End: Complemental strand, 8951465 - 8951403
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagac 365  Q
    |||||||||||||||||||||||||||| |||||||||        |||||||||||||||||    
T  8951465 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagac 8951403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 230
Target Start/End: Complemental strand, 30525281 - 30525219
Alignment:
Q  168 atctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaac 230  Q
    |||||||||||||||||  ||||||| |||||  |||||||||||||||||||| | ||||||    
T  30525281 atctcatcccaaaagctagctcaaagaatgagagtactcaaacatatttatacactaaacaac 30525219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 39029177 - 39029215
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  39029177 ttactccctccgtccctaattataagacccttttgagaa 39029215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 41014502 - 41014540
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgaga 339  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  41014502 attactccctccgtccctaattataagatctttttgaga 41014540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 366
Target Start/End: Complemental strand, 44580911 - 44580853
Alignment:
Q  308 cctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||||||||        ||||||||||||||||||    
T  44580911 cctccgtccctaattataagacctttttgagaaatttttttgtccctttttataagacc 44580853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 8948390 - 8948325
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||| ||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  8948390 attactccatccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 8948325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 28572046 - 28572083
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||| |||||||||    
T  28572046 tactccctccgtccctaattataagacccttttgagaa 28572083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 28579639 - 28579676
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||| |||||||||    
T  28579639 tactccctccgtccctaattataagacccttttgagaa 28579676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 34568490 - 34568527
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||| |||||||||    
T  34568490 tactccctccgtccctaattataagacccttttgagaa 34568527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 36177142 - 36177077
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||||  |||||||||        ||||||||||||||||||    
T  36177142 attactccctccgtccctaattataagactcttttgagaattttttttgtccctttttataagacc 36177077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 36786467 - 36786504
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| |||||||||||||||||||||||||||||||||    
T  36786467 tacttcctccgtccctaattataagacctttttgagaa 36786504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 38183608 - 38183571
Alignment:
Q  297 aaacattactccctccgtccctaattataagacctttt 334  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  38183608 aaacactactccctccgtccctaattataagacctttt 38183571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 40784891 - 40784928
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| |||||||||||||||||||||||||||||||||    
T  40784891 tactacctccgtccctaattataagacctttttgagaa 40784928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 335
Target Start/End: Original strand, 26990567 - 26990599
Alignment:
Q  303 tactccctccgtccctaattataagaccttttt 335  Q
    |||||||||||||||||||||||||||||||||    
T  26990567 tactccctccgtccctaattataagaccttttt 26990599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 2152277 - 2152214
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||| ||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  2152277 tactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 2152214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 5162304 - 5162367
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||| ||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  5162304 tactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 5162367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 11798605 - 11798668
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    ||||||||| |||||||||||||||||| |||||||||        ||||||||||||||||||    
T  11798605 tactccctctgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 11798668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 18455720 - 18455783
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||| ||||        ||||||||||||||||||    
T  18455720 tactccctccgtccctaattataagacccttttaagaattttttttgtccctttttataagacc 18455783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 26016569 - 26016632
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||| ||        ||||||||||||||||||    
T  26016569 tactccctccgtccctaattataagacccttttgaaaaaaaaatttgtccctttttataagacc 26016632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 38878721 - 38878784
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    ||||||||||||| |||||||||||||| |||||||||        ||||||||||||||||||    
T  38878721 tactccctccgtctctaattataagacccttttgagaattttttttgtccctttttataagacc 38878784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 40741265 - 40741328
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||| ||| |||||||||        ||||||||||||||||||    
T  40741265 tactccctccgtccctaattataatacccttttgagaattttttttgtccctttttataagacc 40741328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 42885054 - 42885117
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||| ||        ||||||||||||||||||    
T  42885054 tactccctccgtccctaattataagacccttttgaaaaaaaaaattgtccctttttataagacc 42885117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 365
Target Start/End: Complemental strand, 7758946 - 7758884
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagac 365  Q
    |||||||||||||||||||||||||||  |||||||||        |||||||||||||||||    
T  7758946 tactccctccgtccctaattataagacacttttgagaatattttttgtccctttttataagac 7758884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 282
Target Start/End: Complemental strand, 12704259 - 12704217
Alignment:
Q  240 tgagcgatatgagactaacaacaaactacaaataacttcaaca 282  Q
    |||||||| || |||||||||||||||||||| ||||||||||    
T  12704259 tgagcgatgtgggactaacaacaaactacaaacaacttcaaca 12704217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 337
Target Start/End: Complemental strand, 17856813 - 17856779
Alignment:
Q  303 tactccctccgtccctaattataagacctttttga 337  Q
    |||||||||||||||||||||||||||| ||||||    
T  17856813 tactccctccgtccctaattataagacccttttga 17856779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 18641418 - 18641380
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttgagaa 340  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  18641418 ttactacctccgtccctaattataagacccttttgagaa 18641380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 365
Target Start/End: Original strand, 26625793 - 26625855
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagac 365  Q
    |||| ||||| |||||||||||||||||||||||||||        |||||||||||||||||    
T  26625793 tactacctccatccctaattataagacctttttgagaaaaaaatttgtccctttttataagac 26625855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 365
Target Start/End: Original strand, 29598224 - 29598286
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagac 365  Q
    ||||||||||||| |||||||||||||| |||||||||        |||||||||||||||||    
T  29598224 tactccctccgtctctaattataagacccttttgagaattttttttgtccctttttataagac 29598286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 337
Target Start/End: Original strand, 36408415 - 36408449
Alignment:
Q  303 tactccctccgtccctaattataagacctttttga 337  Q
    |||| ||||||||||||||||||||||||||||||    
T  36408415 tactacctccgtccctaattataagacctttttga 36408449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 365
Target Start/End: Complemental strand, 43654240 - 43654178
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagac 365  Q
    |||||||||||||||||||||||||||  |||||||||        |||||||||||||||||    
T  43654240 tactccctccgtccctaattataagactcttttgagaattttttttgtccctttttataagac 43654178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 44502618 - 44502656
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgaga 339  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  44502618 attactccctccgtccctaattataagatccttttgaga 44502656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 4631592 - 4631555
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||| ||||||||||||||||||||| |||||||||    
T  4631592 tactccatccgtccctaattataagaccattttgagaa 4631555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 5593421 - 5593458
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||| ||||||||||||||||||||| |||||||||    
T  5593421 tactccttccgtccctaattataagacccttttgagaa 5593458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 5784185 - 5784148
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  5784185 tactacctccgtccctaattataagatctttttgagaa 5784148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 11798902 - 11798869
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  11798902 tactccctccgtccctaattataagacccttttg 11798869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 12802611 - 12802648
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  12802611 tactacctccgtccctaattataagacccttttgagaa 12802648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 13154225 - 13154192
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  13154225 tactccctccgtccctaattataagacccttttg 13154192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 13532897 - 13532946
Alignment:
Q  174 tcccaaaagctcactcaaaggatgaggatactcaaacatatttatacatt 223  Q
    |||||||||||  || |||||||||| | |||||||||||||||||||||    
T  13532897 tcccaaaagctagcttaaaggatgagaagactcaaacatatttatacatt 13532946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 13622437 - 13622486
Alignment:
Q  174 tcccaaaagctcactcaaaggatgaggatactcaaacatatttatacatt 223  Q
    |||||||||||  || |||||||||| | |||||||||||||||||||||    
T  13622437 tcccaaaagctagcttaaaggatgagaagactcaaacatatttatacatt 13622486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 17069881 - 17069844
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  17069881 tactacctccgtccctaattataagacccttttgagaa 17069844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 17578392 - 17578429
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  17578392 tactacctccgtccctaattataagacccttttgagaa 17578429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 29279493 - 29279460
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  29279493 tactccctccgtccctaattataagacccttttg 29279460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 33980465 - 33980502
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  33980465 tactacctccgtccctaattataagacttttttgagaa 33980502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 40529307 - 40529344
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||| | |||||||||    
T  40529307 tactccctccgtccctaattataagatccttttgagaa 40529344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 40530443 - 40530410
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  40530443 tactccctccgtccctaattataagacccttttg 40530410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 40741561 - 40741528
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  40741561 tactccctccgtccctaattataagaccattttg 40741528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 43653943 - 43653976
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  43653943 tactccctccgtccctaattataagacccttttg 43653976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 44250859 - 44250892
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  44250859 tactccctccgtccctaattataagacccttttg 44250892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 338
Target Start/End: Complemental strand, 6050593 - 6050557
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttgag 338  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  6050593 ttactacctccgtccctaattataagacccttttgag 6050557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 328
Target Start/End: Original strand, 12255089 - 12255121
Alignment:
Q  296 aaaacattactccctccgtccctaattataaga 328  Q
    |||| ||||||||||||||||||||||||||||    
T  12255089 aaaatattactccctccgtccctaattataaga 12255121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 328
Target Start/End: Original strand, 12260632 - 12260664
Alignment:
Q  296 aaaacattactccctccgtccctaattataaga 328  Q
    |||| ||||||||||||||||||||||||||||    
T  12260632 aaaatattactccctccgtccctaattataaga 12260664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 16998994 - 16999030
Alignment:
Q  301 attactccctccgtccctaattataagacctttttga 337  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  16998994 attactccctccgtccataattataagacccttttga 16999030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 9e-21; HSPs: 81)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 151 - 277
Target Start/End: Complemental strand, 55240505 - 55240381
Alignment:
Q  151 atgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatg 250  Q
    ||||||||| | ||| |||||||||||||||||| |||||||||||||||||||||||  |||||  |||| |||||||||    | ||||||| ||||     
T  55240505 atgttaaattggcttgaatctcatcccaaaagctaactcaaaggatgaggatactcaagtatatt--tacactcaacaacctgaaaacctgagcaatata 55240408  T
Q  251 agactaacaacaaactacaaataactt 277  Q
    | ||||||||||||||||||| |||||    
T  55240407 aaactaacaacaaactacaaacaactt 55240381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 282
Target Start/End: Complemental strand, 55240703 - 55240576
Alignment:
Q  155 taaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatgagac 254  Q
    |||||||| ||  |||||||||||||||||| |||||| ||||||| ||||||| |||||||||| | |||||| ||    | | ||||| ||| || ||    
T  55240703 taaatagatttggatctcatcccaaaagctcgctcaaaagatgagggtactcaagcatatttatatactcaacatcctgaaaacttgagcaatacgaaac 55240604  T
Q  255 taacaacaaactacaaataacttcaaca 282  Q
    ||||||||||||||||| ||||||||||    
T  55240603 taacaacaaactacaaacaacttcaaca 55240576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 283
Target Start/End: Complemental strand, 11785068 - 11784976
Alignment:
Q  191 aaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatgagactaacaacaaactacaaataacttcaacaa 283  Q
    |||||||||| |||||||||||||||||||| ||||||  ||  || ||||||  || || |||||||||||||||||||| |||||||||||    
T  11785068 aaggatgagggtactcaaacatatttatacactcaacagtccgagaacctgagtaatgtgggactaacaacaaactacaaacaacttcaacaa 11784976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 1859144 - 1859207
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    ||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||    
T  1859144 tactccctccgtccctaattataagacctttttgagaattttttttgtccctttttataagacc 1859207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 25708717 - 25708678
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25708717 attactccctccgtccctaattataagacctttttgagaa 25708678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 47806858 - 47806923
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  47806858 attactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 47806923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 366
Target Start/End: Original strand, 54676549 - 54676610
Alignment:
Q  305 ctccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    ||||||||||||||||||||||||||||||||||||        ||||||||||||||||||    
T  54676549 ctccctccgtccctaattataagacctttttgagaattttttttgtccctttttataagacc 54676610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 302 - 366
Target Start/End: Complemental strand, 5743697 - 5743633
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    ||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  5743697 ttactccctccgtccctaattataagacccttttgagaaaaaaatttgtccctttttataagacc 5743633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 302 - 366
Target Start/End: Complemental strand, 34273257 - 34273193
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    ||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  34273257 ttactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 34273193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 168 - 280
Target Start/End: Original strand, 36165468 - 36165580
Alignment:
Q  168 atctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatgagactaacaacaaacta 267  Q
    |||||||||||||| ||  | |||| ||||||| ||||||||||| |||||||| ||||||||||  || ||| ||| || || |||||  |||||| ||    
T  36165468 atctcatcccaaaatctagcacaaaagatgagggtactcaaacatctttatacactcaacaacccgggaaccttagcaatgtgggactagaaacaaatta 36165567  T
Q  268 caaataacttcaa 280  Q
    |||| ||||||||    
T  36165568 caaacaacttcaa 36165580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 301 - 365
Target Start/End: Original strand, 52977980 - 52978044
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagac 365  Q
    |||||||||||||||||||||||||||||| |||||||||        |||||||||||||||||    
T  52977980 attactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagac 52978044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 4035825 - 4035888
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  4035825 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 4035888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 5375594 - 5375531
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  5375594 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 5375531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 30771526 - 30771565
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  30771526 attactccctccgtccctaattataagacccttttgagaa 30771565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 45742843 - 45742780
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  45742843 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 45742780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 18523225 - 18523283
Alignment:
Q  174 tcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaaccc 232  Q
    ||||||||| |  |||||||||||||| ||||||||||||||||||  |||||||||||    
T  18523225 tcccaaaagatacctcaaaggatgagggtactcaaacatatttatatgttcaacaaccc 18523283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 366
Target Start/End: Original strand, 36990907 - 36990977
Alignment:
Q  296 aaaacattactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||| |||||| |||||||| ||||||||||||||||||||||||        ||||||||||||||||||    
T  36990907 aaaaaattactacctccgtctctaattataagacctttttgagaattttttttgtccctttttataagacc 36990977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 4316018 - 4316071
Alignment:
Q  167 aatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatac 220  Q
    ||||||| ||||| |||| |||||||||||||||||| |||| |||||||||||    
T  4316018 aatctcaacccaacagctaactcaaaggatgaggatattcaatcatatttatac 4316071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 9328277 - 9328240
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||| |||||||||    
T  9328277 tactccctccgtccctaattataagacccttttgagaa 9328240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 32033030 - 32032993
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||| |||||||||    
T  32033030 tactccctccgtccctaattataagacccttttgagaa 32032993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 33413518 - 33413555
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||| |||||||||    
T  33413518 tactccctccgtccctaattataagacccttttgagaa 33413555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 43388032 - 43387967
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||| ||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  43388032 attacttcctccgtccctaattataagacccttttgagaatttcttttgtccctttttataagacc 43387967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 44294789 - 44294826
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||| |||||||||    
T  44294789 tactccctccgtccctaattataagacccttttgagaa 44294826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 336
Target Start/End: Complemental strand, 626010 - 625970
Alignment:
Q  296 aaaacattactccctccgtccctaattataagacctttttg 336  Q
    |||| |||||| |||||||||||||||||||||||||||||    
T  626010 aaaaaattactacctccgtccctaattataagacctttttg 625970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 366
Target Start/End: Complemental strand, 2615987 - 2615919
Alignment:
Q  298 aacattactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||| ||||||||||||||||||| |||||||| |||||||||        ||||||||||||||||||    
T  2615987 aacaatactccctccgtccctaatcataagacccttttgagaaatttttttgtccctttttataagacc 2615919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 280
Target Start/End: Original strand, 23564272 - 23564400
Alignment:
Q  152 tgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatga 251  Q
    |||||||| |||||  ||||||||||||| ||| ||| ||| ||||| | | || ||||||| ||||||| |||||||||    | ||||||| || ||     
T  23564272 tgttaaattgacttggatctcatcccaaatgctaacttaaaagatgaaggttctaaaacatacttatacactcaacaacctgaaaacctgagcaatgtgg 23564371  T
Q  252 gactaacaacaaactacaaataacttcaa 280  Q
    ||| || ||||||||||||| ||||||||    
T  23564372 gacaaataacaaactacaaacaacttcaa 23564400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 26626039 - 26626003
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgaga 339  Q
    |||||||||||||||||||||||||||| ||||||||    
T  26626039 tactccctccgtccctaattataagacccttttgaga 26626003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 227
Target Start/End: Original strand, 34542405 - 34542445
Alignment:
Q  187 ctcaaaggatgaggatactcaaacatatttatacattcaac 227  Q
    |||||||||||| |||||||||||||||||||||| |||||    
T  34542405 ctcaaaggatgatgatactcaaacatatttatacactcaac 34542445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 35675959 - 35675923
Alignment:
Q  301 attactccctccgtccctaattataagacctttttga 337  Q
    |||||||||||||||||||||||||||||| ||||||    
T  35675959 attactccctccgtccctaattataagacccttttga 35675923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 4415965 - 4416028
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||| ||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  4415965 tactacctccgtccctaattataagacccttttgagaatgttttttgtccctttttataagacc 4416028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 336
Target Start/End: Original strand, 4549627 - 4549662
Alignment:
Q  301 attactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||||| |||||    
T  4549627 attactccctccgtccctaattataagacccttttg 4549662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 6753525 - 6753588
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||| | |||||||||        ||||||||||||||||||    
T  6753525 tactccctccgtccctaattataagatccttttgagaattttttttgtccctttttataagacc 6753588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 168 - 219
Target Start/End: Original strand, 18523024 - 18523075
Alignment:
Q  168 atctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttata 219  Q
    ||||||| |||||||||| |||||||||||| | ||||||| ||||||||||    
T  18523024 atctcataccaaaagctcgctcaaaggatgatggtactcaagcatatttata 18523075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 309 - 340
Target Start/End: Original strand, 18882357 - 18882388
Alignment:
Q  309 ctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||||||||||||||||||||||||||    
T  18882357 ctccgtccctaattataagacctttttgagaa 18882388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 24754078 - 24754141
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||| | |||||||||        ||||||||||||||||||    
T  24754078 tactccctccgtccctaattataagatccttttgagaattttttttgtccctttttataagacc 24754141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 28501423 - 28501360
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||| ||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  28501423 tactacctccgtccctaattataagacccttttgagaaatttttttgtccctttttataagacc 28501360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 29427486 - 29427529
Alignment:
Q  296 aaaacattactccctccgtccctaattataagacctttttgaga 339  Q
    |||||| ||||||||| |||||||||||||||| ||||||||||    
T  29427486 aaaacactactccctctgtccctaattataagatctttttgaga 29427529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 29520201 - 29520138
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||| ||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  29520201 tactacctccgtccctaattataagacccttttgagaaaaaaatttgtccctttttataagacc 29520138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 31937076 - 31937139
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||| ||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  31937076 tactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 31937139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 36391854 - 36391917
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||| ||||||||||||| |||||||||        ||||||||||||||||||    
T  36391854 tactccctccgtccttaattataagacccttttgagaattttttttgtccctttttataagacc 36391917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 39797434 - 39797497
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||| |||||||||||||||||||||||||||||| ||        ||||||||||||||||||    
T  39797434 tactacctccgtccctaattataagacctttttgaaaaaatcatttgtccctttttataagacc 39797497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 46481426 - 46481363
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||| ||||| |||||||||||||||||||||||||||        ||||||||||||||||||    
T  46481426 tactacctccatccctaattataagacctttttgagaatttttcttgtccctttttataagacc 46481363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 48030313 - 48030376
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||| ||||||||||||||||| |||||||||        ||||||||||||||||||    
T  48030313 tactccctccatccctaattataagacccttttgagaattttttttgtccctttttataagacc 48030376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 49373732 - 49373693
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  49373732 attactacctccgtccctaattataagacccttttgagaa 49373693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 51536168 - 51536207
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaa 340  Q
    ||||||| |||| |||||||||||||||||||||||||||    
T  51536168 attactctctccctccctaattataagacctttttgagaa 51536207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 53277224 - 53277185
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||||| |||| ||||    
T  53277224 attactccctccgtccctaattataagacccttttaagaa 53277185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 53564395 - 53564356
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  53564395 attactacctccgtccctaattataagacccttttgagaa 53564356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 280
Target Start/End: Complemental strand, 1460483 - 1460406
Alignment:
Q  202 tactcaaacatatttatacattcaacaacccatgatcctgagcgatatgagactaacaacaaactacaaataacttcaa 280  Q
    |||||||||||||||||||| ||  ||||||  || ||||||| || |||||| || ||||||||||||| ||||||||    
T  1460483 tactcaaacatatttatacactcc-caacccgagaacctgagcaatgtgagacaaataacaaactacaaacaacttcaa 1460406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 365
Target Start/End: Original strand, 6807429 - 6807491
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagac 365  Q
    ||||||||| |||||||||||||||||| |||||||||        |||||||||||||||||    
T  6807429 tactccctctgtccctaattataagacccttttgagaattttttttgtccctttttataagac 6807491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 15241479 - 15241517
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||||||||||||||||||||||  |||||||||    
T  15241479 ttactccctccgtccctaattataagactcttttgagaa 15241517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 337
Target Start/End: Complemental strand, 20391474 - 20391440
Alignment:
Q  303 tactccctccgtccctaattataagacctttttga 337  Q
    |||||||||||||||||||||||||||| ||||||    
T  20391474 tactccctccgtccctaattataagacccttttga 20391440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 29014063 - 29014097
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttg 336  Q
    ||||||||||||||||||||||||||||| |||||    
T  29014063 ttactccctccgtccctaattataagacccttttg 29014097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 47228766 - 47228728
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttgagaa 340  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  47228766 ttacttcctccgtccctaattataagacccttttgagaa 47228728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 55563166 - 55563128
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgaga 339  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  55563166 attactacctccgtccctaattataagacccttttgaga 55563128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 4036122 - 4036089
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  4036122 tactccctccgtccctaattataagacccttttg 4036089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 5743399 - 5743432
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  5743399 tactccctccgtccctaattataagaccattttg 5743432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 334
Target Start/End: Complemental strand, 6629511 - 6629478
Alignment:
Q  301 attactccctccgtccctaattataagacctttt 334  Q
    |||||| |||||||||||||||||||||||||||    
T  6629511 attactacctccgtccctaattataagacctttt 6629478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 8343908 - 8343945
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||| ||||| |||||||||||||||||||||||||    
T  8343908 tactccttccgttcctaattataagacctttttgagaa 8343945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 9928964 - 9929033
Alignment:
Q  151 atgttaaatagactta-aatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttata 219  Q
    ||||||||||| |||  ||||| || ||||||| |  |||||| ||||||||||||||||||||||||||    
T  9928964 atgttaaataggcttggaatcttattccaaaagttagctcaaaagatgaggatactcaaacatatttata 9929033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 17610057 - 17610020
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||| | |||||||||    
T  17610057 tactccctccgtccctaattataagatccttttgagaa 17610020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 20455218 - 20455181
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  20455218 tactacctccgtccctaattataagacccttttgagaa 20455181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 20747467 - 20747434
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  20747467 tactccctccgtccctaattataagacccttttg 20747434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 25124283 - 25124246
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  25124283 tactacctccgtccctaattataagacccttttgagaa 25124246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 39144701 - 39144668
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    ||||||||||||| ||||||||||||||||||||    
T  39144701 tactccctccgtctctaattataagacctttttg 39144668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 45097202 - 45097165
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||| ||||||||||||||||||||| |||||||||    
T  45097202 tactccatccgtccctaattataagacccttttgagaa 45097165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 365
Target Start/End: Original strand, 45921424 - 45921493
Alignment:
Q  296 aaaacattactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagac 365  Q
    |||| |||||| |||  ||||||||||||||||||||||||||||        |||||||||||||||||    
T  45921424 aaaaaattactacctttgtccctaattataagacctttttgagaattttttttgtccctttttataagac 45921493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 46949992 - 46950029
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  46949992 tactacctccgtccctaattataagacccttttgagaa 46950029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 49793091 - 49793128
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  49793091 tactacctccgtccctaattataagacccttttgagaa 49793128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 50533884 - 50533921
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||| | |||||||||    
T  50533884 tactccctccgtccctaattataagatcattttgagaa 50533921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 52870644 - 52870681
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||||||| |||||||||||||| |||||||||    
T  52870644 tactccctccgtctctaattataagacccttttgagaa 52870681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 53629792 - 53629829
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||| ||||||||||||||||| |||||||||    
T  53629792 tactccctccatccctaattataagacccttttgagaa 53629829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 55631999 - 55632032
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  55631999 tactccctccgtccctaattataagacccttttg 55632032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 56432518 - 56432555
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  56432518 tactacctccgtccctaattataagacccttttgagaa 56432555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 7698508 - 7698472
Alignment:
Q  301 attactccctccgtccctaattataagacctttttga 337  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  7698508 attactacctccgtccctaattataagacccttttga 7698472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 24073163 - 24073127
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgaga 339  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  24073163 tactacctccgtccttaattataagacctttttgaga 24073127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 340
Target Start/End: Complemental strand, 30868845 - 30868801
Alignment:
Q  296 aaaacattactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| |||||| | ||||||||||||||||||||| |||||||||    
T  30868845 aaaatattactacatccgtccctaattataagacccttttgagaa 30868801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 32899255 - 32899219
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgaga 339  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  32899255 tactacctccgtccctaattataagacccttttgaga 32899219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 231
Target Start/End: Original strand, 41389425 - 41389505
Alignment:
Q  151 atgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacc 231  Q
    |||||||||||  || ||||| ||| |||||| |  |||||||||| |||  ||| ||| |||||||||||||||||||||    
T  41389425 atgttaaataggtttgaatctaatctcaaaaggtagctcaaaggataaggggactgaaatatatttatacattcaacaacc 41389505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 340
Target Start/End: Original strand, 41620519 - 41620551
Alignment:
Q  308 cctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||||||||||||||||| |||||||||    
T  41620519 cctccgtccctaattataagacccttttgagaa 41620551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 44019610 - 44019678
Alignment:
Q  163 cttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacc 231  Q
    |||| ||||||||||||||| |  |||||||||||||| | | |||||| ||||||||||  |||||||    
T  44019610 cttagatctcatcccaaaagttagctcaaaggatgagggtgcccaaacacatttatacatcaaacaacc 44019678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 54878054 - 54878018
Alignment:
Q  301 attactccctccgtccctaattataagacctttttga 337  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  54878054 attactacctccgtccctaattataagaccgttttga 54878018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 228
Target Start/End: Original strand, 35536769 - 35536846
Alignment:
Q  151 atgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaaca 228  Q
    ||||||||| ||||| |||||||||||||||| | ||||||| ||||||||||||  |||||||||||||||||||||    
T  35536769 atgttaaatggacttcaatctcatcccaaaagttaactcaaatgatgaggatacttgaacatatttatacattcaaca 35536846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 15811271 - 15811206
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  15811271 attactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 15811206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 30290263 - 30290328
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  30290263 attactccctccgtccctaattataagacccttttgagaaatttttttgtccctttttataagacc 30290328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 49907019 - 49907084
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  49907019 attactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 49907084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 943676 - 943637
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  943676 attactccctccgtccctaattataagacccttttgagaa 943637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 1039418 - 1039355
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  1039418 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 1039355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 1046324 - 1046261
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  1046324 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 1046261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 4102751 - 4102688
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  4102751 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 4102688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 11741397 - 11741460
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  11741397 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 11741460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 23541979 - 23542042
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  23541979 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 23542042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 36694854 - 36694917
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  36694854 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 36694917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 36710955 - 36711018
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  36710955 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 36711018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 37951986 - 37951923
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  37951986 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 37951923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 39363233 - 39363194
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  39363233 attactccctccgtccctaattataagacccttttgagaa 39363194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 39497433 - 39497496
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  39497433 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 39497496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 44649627 - 44649666
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  44649627 attactccctccgtccctaattataagacccttttgagaa 44649666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 45039412 - 45039475
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  45039412 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 45039475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 46075904 - 46075841
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  46075904 tactccctccgtccctaattataagacccttttgagaatattttttgtccctttttataagacc 46075841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 52431211 - 52431148
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  52431211 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 52431148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 12178099 - 12178149
Alignment:
Q  169 tctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttata 219  Q
    ||||||||||||||||   ||||||||||||| ||||||||||||||||||    
T  12178099 tctcatcccaaaagctaggtcaaaggatgagggtactcaaacatatttata 12178149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 366
Target Start/End: Complemental strand, 30289898 - 30289836
Alignment:
Q  304 actccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    ||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  30289898 actccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 30289836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 280
Target Start/End: Complemental strand, 10645674 - 10645545
Alignment:
Q  151 atgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatg 250  Q
    |||||||||||  ||  |||||||||||| |||  |||| ||| ||| || ||||||| |||||||||||| |||| | | |  || |||||||||| ||    
T  10645674 atgttaaataggttttgatctcatcccaacagccaactctaagtatgggggtactcaagcatatttatacactcaataccgcgggaacctgagcgatgtg 10645575  T
Q  251 agactaacaacaaactacaaataacttcaa 280  Q
     ||| |||||||||||||||| ||| ||||    
T  10645574 ggacaaacaacaaactacaaacaacctcaa 10645545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 232
Target Start/End: Complemental strand, 10645829 - 10645788
Alignment:
Q  191 aaggatgaggatactcaaacatatttatacattcaacaaccc 232  Q
    |||||||||| |||||||||||||||||||| ||||||||||    
T  10645829 aaggatgagggtactcaaacatatttatacactcaacaaccc 10645788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 366
Target Start/End: Original strand, 16456635 - 16456699
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    ||||||||||||||||||||||||||||| || ||||||        ||||||||||||||||||    
T  16456635 ttactccctccgtccctaattataagacccttctgagaaatttttctgtccctttttataagacc 16456699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 14171540 - 14171579
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  14171540 attactccctccgtctctaattataagacccttttgagaa 14171579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 27037269 - 27037332
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||| ||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  27037269 tactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 27037332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 31061316 - 31061253
Alignment:
Q  151 atgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatat 214  Q
    ||||||||||| ||| |||||||| | ||||||| ||||||| ||||| |||||||||| ||||    
T  31061316 atgttaaataggcttgaatctcattctaaaagctaactcaaaagatgatgatactcaaatatat 31061253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 336
Target Start/End: Complemental strand, 39497732 - 39497697
Alignment:
Q  301 attactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||||| |||||    
T  39497732 attactccctccgtccctaattataagacccttttg 39497697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 41855510 - 41855447
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||| ||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  41855510 tactccatccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 41855447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 336
Target Start/End: Complemental strand, 44646570 - 44646535
Alignment:
Q  301 attactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||||| |||||    
T  44646570 attactccctccgtccctaattataagacccttttg 44646535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 336
Target Start/End: Complemental strand, 44649928 - 44649893
Alignment:
Q  301 attactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||||| |||||    
T  44649928 attactccctccgtccctaattataagacccttttg 44649893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 52601991 - 52602054
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||| ||||        ||||||||||||||||||    
T  52601991 tactccctccgtccctaattataagacccttttaagaattttttttgtccctttttataagacc 52602054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 269
Target Start/End: Complemental strand, 3142995 - 3142897
Alignment:
Q  171 tcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatgagactaacaacaaactaca 269  Q
    |||||||||||||| |||| ||| |||| | ||||| | |||||||||||||||||||   ||  | | |||||||| || ||||||||| ||||||||    
T  3142995 tcatcccaaaagctaactcgaagaatgaaggtactcgagcatatttatacattcaacagttcagaaacttgagcgatgtgggactaacaataaactaca 3142897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 340
Target Start/End: Original strand, 13343776 - 13343810
Alignment:
Q  306 tccctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||||||||||||||||||| |||||||||    
T  13343776 tccctccgtccctaattataagacccttttgagaa 13343810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 337
Target Start/End: Original strand, 38920239 - 38920273
Alignment:
Q  303 tactccctccgtccctaattataagacctttttga 337  Q
    |||||||||||||||||||||||||||| ||||||    
T  38920239 tactccctccgtccctaattataagacccttttga 38920273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 45335884 - 45335922
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||||| ||||||||||||||||| |||||||||    
T  45335884 ttactccctccctccctaattataagacccttttgagaa 45335922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 1047992 - 1048025
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  1047992 tactccctccgtccctaattataagacccttttg 1048025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 7763786 - 7763749
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  7763786 tactacctccgtccctaattataagacccttttgagaa 7763749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 7783991 - 7784028
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  7783991 tactccctccgtccctaattataatacccttttgagaa 7784028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 9202245 - 9202278
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  9202245 tactccctccgtccctaattataagacccttttg 9202278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 23542276 - 23542243
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  23542276 tactccctccgtccctaattataagacccttttg 23542243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 25509209 - 25509246
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  25509209 tactacctccgtccctaattataagacccttttgagaa 25509246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 39362934 - 39362967
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  39362934 tactccctccgtccctaattataagacccttttg 39362967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 39750121 - 39750154
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  39750121 tactccctccgtccctaattataagacccttttg 39750154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 39750418 - 39750381
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  39750418 tactccctctgtccctaattataagacccttttgagaa 39750381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 42276198 - 42276161
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  42276198 tactacctccgtccctaattataagacccttttgagaa 42276161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 42872373 - 42872308
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||| ||||||| |||||| ||        ||||||||||||||||||    
T  42872373 attactccctccgtccctaattgtaagacccttttgaaaaaaaaatttgtccctttttataagacc 42872308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 43456658 - 43456621
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  43456658 tactacctccgtccctaattataagacccttttgagaa 43456621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 50008520 - 50008483
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||| | |||||||||    
T  50008520 tactccctccgtccctaattataagatcattttgagaa 50008483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 50937779 - 50937816
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  50937779 tactacctccgtccctaattataagaccattttgagaa 50937816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 3371705 - 3371645
Alignment:
Q  168 atctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaaca 228  Q
    |||||||||||||||||  |||||| ||||||| ||||||| ||| | |||||| ||||||    
T  3371705 atctcatcccaaaagctacctcaaaagatgagggtactcaagcatgtgtatacactcaaca 3371645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 21631146 - 21631110
Alignment:
Q  301 attactccctccgtccctaattataagacctttttga 337  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  21631146 attactacctccgtccctaattataagacccttttga 21631110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 28843244 - 28843280
Alignment:
Q  190 aaaggatgaggatactcaaacatatttatacattcaa 226  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  28843244 aaaggatgaggatattcaaaaatatttatacattcaa 28843280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 36695154 - 36695118
Alignment:
Q  301 attactccctccgtccctaattataagacctttttga 337  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  36695154 attactccctctgtccctaattataagacccttttga 36695118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 36711255 - 36711219
Alignment:
Q  301 attactccctccgtccctaattataagacctttttga 337  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  36711255 attactccctctgtccctaattataagacccttttga 36711219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 44646269 - 44646305
Alignment:
Q  301 attactccctccgtccctaattataagacctttttga 337  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  44646269 attactccttccgtccctaattataagacccttttga 44646305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 274
Target Start/End: Original strand, 30135500 - 30135623
Alignment:
Q  151 atgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatg 250  Q
    ||||||||||| |||  ||||||||||||||| |  |||||| ||||||| ||||||| ||||||||||||| ||||| || | || | ||||||||||     
T  30135500 atgttaaataggcttggatctcatcccaaaagttagctcaaatgatgagggtactcaagcatatttatacatccaacagcctaagaacttgagcgatata 30135599  T
Q  251 agactaacaacaaactacaaataa 274  Q
     ||| || ||||||||||||||||    
T  30135600 ggacaaataacaaactacaaataa 30135623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 274
Target Start/End: Original strand, 30141629 - 30141752
Alignment:
Q  151 atgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatg 250  Q
    ||||||||||| |||  ||||||||||||||| |  |||||| ||||||| ||||||| ||||||||||||| ||||| || | || | ||||||||||     
T  30141629 atgttaaataggcttggatctcatcccaaaagttagctcaaatgatgagggtactcaagcatatttatacatccaacagcctaagaacttgagcgatata 30141728  T
Q  251 agactaacaacaaactacaaataa 274  Q
     ||| || ||||||||||||||||    
T  30141729 ggacaaataacaaactacaaataa 30141752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 274
Target Start/End: Original strand, 30145051 - 30145174
Alignment:
Q  151 atgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatg 250  Q
    ||||||||||| |||  ||||||||||||||| |  |||||| ||||||| ||||||| ||||||||||||| ||||| || | || | ||||||||||     
T  30145051 atgttaaataggcttggatctcatcccaaaagttagctcaaatgatgagggtactcaagcatatttatacatccaacagcctaagaacttgagcgatata 30145150  T
Q  251 agactaacaacaaactacaaataa 274  Q
     ||| || ||||||||||||||||    
T  30145151 ggacaaataacaaactacaaataa 30145174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 295 - 366
Target Start/End: Original strand, 21756478 - 21756549
Alignment:
Q  295 gaaaacattactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  21756478 gaaaaaattactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 21756549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 23700822 - 23700759
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    ||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||    
T  23700822 tactccctccgtccctaattataagacctttttgagaattttttttgtccctttttataagacc 23700759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 23719277 - 23719214
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    ||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||    
T  23719277 tactccctccgtccctaattataagacctttttgagaattttttttgtccctttttataagacc 23719214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 23737733 - 23737670
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    ||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||    
T  23737733 tactccctccgtccctaattataagacctttttgagaattttttttgtccctttttataagacc 23737670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 14428608 - 14428673
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  14428608 attactccctccgtccctaattataagacccttttgagaaatttttttgtccctttttataagacc 14428673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 244
Target Start/End: Original strand, 30130780 - 30130873
Alignment:
Q  151 atgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagc 244  Q
    |||||||||||  ||  |||||||||||||| ||  |||||| ||||| ||||||||| |||||||||||| |||||| |||| || |||||||    
T  30130780 atgttaaataggtttggatctcatcccaaaaactagctcaaatgatgaagatactcaagcatatttatacactcaacagcccaagaacctgagc 30130873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 7181350 - 7181413
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  7181350 tactccctccgtccctaattataagacccttttgagaaatttttttgtccctttttataagacc 7181413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 9499534 - 9499471
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  9499534 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 9499471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 10220931 - 10220970
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  10220931 attactccctccgtccctaattataagacccttttgagaa 10220970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 282
Target Start/End: Complemental strand, 11047539 - 11047444
Alignment:
Q  187 ctcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatgagactaacaacaaactacaaataacttcaaca 282  Q
    |||||||||||||| ||||||| | |||||||||| |||||| | ||  | ||||||| || || |||||  ||||||||||||| ||||||||||    
T  11047539 ctcaaaggatgagggtactcaagcgtatttatacactcaacagcgcacaaacctgagcaatgtgggactagaaacaaactacaaacaacttcaaca 11047444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 12683219 - 12683156
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  12683219 tactccctccgtccctaattataagaccattttgagaatttttttagtccctttttataagacc 12683156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 22103966 - 22103903
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  22103966 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 22103903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 25149159 - 25149096
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  25149159 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 25149096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 302 - 365
Target Start/End: Complemental strand, 26593803 - 26593740
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagac 365  Q
    ||||||||||||||||||||||||||||| |||||||||        |||||||||||||||||    
T  26593803 ttactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagac 26593740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 35868120 - 35868057
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  35868120 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 35868057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 37728713 - 37728776
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  37728713 tactccctccgtccctaattataagacccttttgagaatatttgttgtccctttttataagacc 37728776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 43868103 - 43868166
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  43868103 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 43868166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 44543782 - 44543845
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  44543782 tactccctccgtccctaattataagacccttttgagaatttcttttgtccctttttataagacc 44543845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 45252773 - 45252836
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  45252773 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 45252836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 46050025 - 46049986
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  46050025 attactccctccgtccctaattataagacccttttgagaa 46049986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 302 - 365
Target Start/End: Complemental strand, 49127236 - 49127173
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagac 365  Q
    |||| ||||||||||||||||||||||||||||||||||        |||||||||||||||||    
T  49127236 ttaccccctccgtccctaattataagacctttttgagaattttttttgtccctttttataagac 49127173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 365
Target Start/End: Complemental strand, 53361892 - 53361830
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagac 365  Q
    |||||||||||||||||||||||||||| |||||||||        |||||||||||||||||    
T  53361892 tactccctccgtccctaattataagaccattttgagaattttttttgtccctttttataagac 53361830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 4024051 - 4024088
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttgaga 339  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  4024051 ttactccctccgtccctaattataagacccttttgaga 4024088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 12050429 - 12050392
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||| |||||||||    
T  12050429 tactccctccgtccctaattataagacccttttgagaa 12050392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 36236576 - 36236632
Alignment:
Q  171 tcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaaca 228  Q
    |||||||||||| | ||||||| ||||||| | |||||||||||||||||||||||||    
T  36236576 tcatcccaaaagataactcaaatgatgagg-tgctcaaacatatttatacattcaaca 36236632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 228
Target Start/End: Complemental strand, 50196977 - 50196900
Alignment:
Q  151 atgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaaca 228  Q
    |||||||||||  ||  ||||||||||||||| |  |||||||||||||| || | ||||||||||||||| ||||||    
T  50196977 atgttaaataggtttggatctcatcccaaaagttagctcaaaggatgagggtatttaaacatatttatacactcaaca 50196900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 282
Target Start/End: Complemental strand, 50197207 - 50197098
Alignment:
Q  173 atcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatgagactaacaacaaactacaaat 272  Q
    ||||||||||||   ||||||||||||| ||||| | |||||||||||| ||||||   | ||| ||||||| || || ||| || ||||||||| |||     
T  50197207 atcccaaaagctagatcaaaggatgagggtactcgaccatatttatacactcaacagttcgtgaacctgagcaatgtgggacaaataacaaactataaac 50197108  T
Q  273 aacttcaaca 282  Q
    ||||||||||    
T  50197107 aacttcaaca 50197098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 51284099 - 51284062
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||| |||||||||    
T  51284099 tactccctccgtccctaattataagacccttttgagaa 51284062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 340
Target Start/End: Original strand, 36098959 - 36099003
Alignment:
Q  296 aaaacattactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| |||||||| ||||||||||||||||||||| |||||||||    
T  36098959 aaaatattactccatccgtccctaattataagacccttttgagaa 36099003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 7051757 - 7051694
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||| | |||||||||        ||||||||||||||||||    
T  7051757 tactccctccgtccctaattataagatccttttgagaattttttttgtccctttttataagacc 7051694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 8321925 - 8321988
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||| ||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  8321925 tactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 8321988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 336
Target Start/End: Original strand, 9779977 - 9780012
Alignment:
Q  301 attactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||||| |||||    
T  9779977 attactccctccgtccctaattataagacccttttg 9780012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 20862196 - 20862259
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||| ||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  20862196 tactccatccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 20862259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 26058546 - 26058609
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||| ||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  26058546 tacttcctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 26058609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 26221288 - 26221351
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||  |||||||||        ||||||||||||||||||    
T  26221288 tactccctccgtccctaattataagactcttttgagaattttttttgtccctttttataagacc 26221351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 33868448 - 33868511
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||| | |||||||||        ||||||||||||||||||    
T  33868448 tactccctccgtccctaattataagatccttttgagaattttttttgtccctttttataagacc 33868511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 46845529 - 46845466
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||| ||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  46845529 tactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 46845466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 46878476 - 46878413
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||| ||||||||||||| |||||||||        ||||||||||||||||||    
T  46878476 tactccctccgtccttaattataagacccttttgagaaatttttttgtccctttttataagacc 46878413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 47066934 - 47066997
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||| ||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  47066934 tacttcctccgtccctaattataagacccttttgagaatattttttgtccctttttataagacc 47066997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 50647981 - 50647918
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    ||||||||||||| |||||||||||||| |||||||||        ||||||||||||||||||    
T  50647981 tactccctccgtctctaattataagacccttttgagaaaaaattttgtccctttttataagacc 50647918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 54782954 - 54782891
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||| ||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  54782954 tactcccttcgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 54782891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 365
Target Start/End: Original strand, 43701178 - 43701240
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagac 365  Q
    ||||||||| |||||||||||||||||| |||||||||        |||||||||||||||||    
T  43701178 tactccctctgtccctaattataagacccttttgagaattttttttgtccctttttataagac 43701240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 366
Target Start/End: Original strand, 46703032 - 46703090
Alignment:
Q  308 cctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    ||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  46703032 cctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 46703090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 366
Target Start/End: Complemental strand, 47008546 - 47008476
Alignment:
Q  296 aaaacattactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||| |||||| ||||||||||||||||||||||  |||||||||        ||||||||||||||||||    
T  47008546 aaaatattactacctccgtccctaattataagacacttttgagaaatttttttgtccctttttataagacc 47008476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 52058984 - 52059018
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttg 336  Q
    ||||||||||||||||||||||||||||| |||||    
T  52058984 ttactccctccgtccctaattataagacccttttg 52059018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 4024348 - 4024315
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  4024348 tactccctccgtccctaattataagacccttttg 4024315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 4759388 - 4759351
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  4759388 tactacctccgtccctaattataagacccttttgagaa 4759351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 14428906 - 14428873
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  14428906 tactccctccgtccctaattataagacccttttg 14428873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 16434977 - 16435010
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  16434977 tactccctccgtccctaattataagacccttttg 16435010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 17699068 - 17699031
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  17699068 tactacctccgtccctaattataagaccattttgagaa 17699031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 20862494 - 20862461
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  20862494 tactccctccgtccctaattataagacccttttg 20862461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 22832644 - 22832607
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||| ||||||||||||||||||||| |||||||||    
T  22832644 tactccttccgtccctaattataagacccttttgagaa 22832607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 24087372 - 24087335
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  24087372 tactacctccgtccctaattataagacccttttgagaa 24087335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 26306644 - 26306607
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  26306644 tactccctccgttcctaattataagacccttttgagaa 26306607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 26806115 - 26806148
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  26806115 tactccctccgtccctaattataagacccttttg 26806148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 31531448 - 31531415
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  31531448 tactccctccgtccctaattataagacccttttg 31531415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 32963142 - 32963105
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||| | |||||||||    
T  32963142 tactccctccgtccctaattataagatccttttgagaa 32963105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 33868745 - 33868712
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  33868745 tactccctccgtccctaattataagacccttttg 33868712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 334
Target Start/End: Original strand, 35711278 - 35711307
Alignment:
Q  305 ctccctccgtccctaattataagacctttt 334  Q
    ||||||||||||||||||||||||||||||    
T  35711278 ctccctccgtccctaattataagacctttt 35711307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 36005801 - 36005768
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  36005801 tactccctccgtccctaattataagacccttttg 36005768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 41392917 - 41392880
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  41392917 tactacctccgtccctaattataagacccttttgagaa 41392880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 45049061 - 45048996
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    ||||||||||| |||| |||||||||||||||||||| ||        ||||||||||||||||||    
T  45049061 attactccctctgtccttaattataagacctttttgaaaaaaaattttgtccctttttataagacc 45048996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 50647684 - 50647717
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  50647684 tactccctccgtccctaattataagacccttttg 50647717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 50726820 - 50726783
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  50726820 tactccctccgtccctgattataagacccttttgagaa 50726783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 50786028 - 50786065
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  50786028 tactccctccgtccctgattataagacccttttgagaa 50786065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 53271888 - 53271855
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    ||||||||||||||||||||||||||| ||||||    
T  53271888 tactccctccgtccctaattataagacttttttg 53271855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 340
Target Start/End: Original strand, 20918224 - 20918256
Alignment:
Q  308 cctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||||||||||||||||| |||||||||    
T  20918224 cctccgtccctaattataagacccttttgagaa 20918256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 340
Target Start/End: Original strand, 20927186 - 20927218
Alignment:
Q  308 cctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||||||||||||||||| |||||||||    
T  20927186 cctccgtccctaattataagacccttttgagaa 20927218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 227
Target Start/End: Complemental strand, 20995787 - 20995747
Alignment:
Q  187 ctcaaaggatgaggatactcaaacatatttatacattcaac 227  Q
    |||||||||||||  || |||||||||||||||||||||||    
T  20995787 ctcaaaggatgagcgtagtcaaacatatttatacattcaac 20995747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 340
Target Start/End: Original strand, 33212390 - 33212434
Alignment:
Q  296 aaaacattactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| |||||| ||||||||||||||||||||| | |||||||||    
T  33212390 aaaatattactacctccgtccctaattataagatccttttgagaa 33212434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 340
Target Start/End: Original strand, 33976508 - 33976540
Alignment:
Q  308 cctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||||||||||||||||| |||||||||    
T  33976508 cctccgtccctaattataagaccattttgagaa 33976540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 23972534 - 23972462
Alignment:
Q  156 aaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaaca 228  Q
    |||||| ||| |||||||| ||||||| | ||||||||||||||| ||||||||||||||||||  |||||||    
T  23972534 aaataggcttgaatctcattccaaaagttaactcaaaggatgagggtactcaaacatatttatatgttcaaca 23972462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 44547426 - 44547463
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||||||||||||||||||||||||||||||||    
T  44547426 tactccctccgtccctaattataagacctttttgagaa 44547463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 164 - 276
Target Start/End: Original strand, 2911964 - 2912076
Alignment:
Q  164 ttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatgagactaacaacaa 263  Q
    |||||||||||||||||  || ||||||| ||||| | || ||||||||||||||||| |||| | |||| || ||||| | || || ||| || |||||    
T  2911964 ttaaatctcatcccaaaccctaactcaaatgatgaaggtattcaaacatatttatacactcaatagcccaggaacctgatccatgtgggacaaataacaa 2912063  T
Q  264 actacaaataact 276  Q
    |||||||| ||||    
T  2912064 actacaaacaact 2912076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 8745877 - 8745937
Alignment:
Q  168 atctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaaca 228  Q
    ||||||||||||||| |  || ||||||||||||||||| |||||||||||||| ||||||    
T  8745877 atctcatcccaaaagttagcttaaaggatgaggatactcgaacatatttatacactcaaca 8745937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 301 - 365
Target Start/End: Original strand, 39197716 - 39197780
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagac 365  Q
    |||||||||||||||||||||||||||||| |||||||||        |||||||||||||||||    
T  39197716 attactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagac 39197780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 21295151 - 21295214
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  21295151 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 21295214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 26255094 - 26255133
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  26255094 attactccctccgtccctaattataagacccttttgagaa 26255133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 29286074 - 29286011
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  29286074 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 29286011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 32814433 - 32814496
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  32814433 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 32814496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 33858903 - 33858840
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  33858903 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 33858840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 38858298 - 38858361
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  38858298 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 38858361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 39871650 - 39871587
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  39871650 tactccctccgtccctaattataagacccttttgagaaatttttttgtccctttttataagacc 39871587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 41026133 - 41026070
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  41026133 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 41026070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 41252398 - 41252335
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  41252398 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 41252335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 40300228 - 40300266
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgaga 339  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  40300228 attactccctccgtccctaattataagacccttttgaga 40300266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 7449270 - 7449307
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||| |||||||||    
T  7449270 tactccctccgtccctaattataagaccattttgagaa 7449307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 19920563 - 19920600
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||| |||||||||    
T  19920563 tactccctccgtccctaattataagacccttttgagaa 19920600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 31457995 - 31458060
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||| ||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  31457995 attacttcctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 31458060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 32872412 - 32872375
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||| |||||||||    
T  32872412 tactccctccgtccctaattataagacccttttgagaa 32872375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 36698168 - 36698131
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||| |||||||||    
T  36698168 tactccctccgtccctaattataagacccttttgagaa 36698131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 44510382 - 44510317
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||||| |||||| ||        ||||||||||||||||||    
T  44510382 attactccctccgtccctaattataagaccattttgaaaaaataatttgtccctttttataagacc 44510317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 48521029 - 48521066
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||| |||||||||    
T  48521029 tactccctccgtccctaattataagacccttttgagaa 48521066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 32759554 - 32759590
Alignment:
Q  301 attactccctccgtccctaattataagacctttttga 337  Q
    |||||| ||||||||||||||||||||||||||||||    
T  32759554 attactacctccgtccctaattataagacctttttga 32759590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 336
Target Start/End: Complemental strand, 38428451 - 38428411
Alignment:
Q  296 aaaacattactccctccgtccctaattataagacctttttg 336  Q
    |||| |||||||||||||||||||||||||||||| |||||    
T  38428451 aaaatattactccctccgtccctaattataagacccttttg 38428411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 29177289 - 29177226
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||| | |||||||||        ||||||||||||||||||    
T  29177289 tactccctccgtccctaattataagatccttttgagaatattttttgtccctttttataagacc 29177226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 34979114 - 34979051
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||  |||||||||        ||||||||||||||||||    
T  34979114 tactccctccgtccctaattataagactcttttgagaattttttttgtccctttttataagacc 34979051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 35035249 - 35035288
Alignment:
Q  190 aaaggatgaggatactcaaacatatttatacattcaacaa 229  Q
    ||||||||||| |||||||||||||||||||| |||||||    
T  35035249 aaaggatgaggctactcaaacatatttatacactcaacaa 35035288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 36646674 - 36646611
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    ||||||||||||||||||||| |||||| |||||||||        ||||||||||||||||||    
T  36646674 tactccctccgtccctaattagaagacccttttgagaattctttttgtccctttttataagacc 36646611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 337
Target Start/End: Original strand, 35888312 - 35888346
Alignment:
Q  303 tactccctccgtccctaattataagacctttttga 337  Q
    |||| ||||||||||||||||||||||||||||||    
T  35888312 tactacctccgtccctaattataagacctttttga 35888346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 41003192 - 41003154
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  41003192 ttactccctccgtccttaattataagacccttttgagaa 41003154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 2290053 - 2290016
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  2290053 tactacctccgtccctaattataagacccttttgagaa 2290016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 20075144 - 20075111
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  20075144 tactccctccgtccctaattataagacccttttg 20075111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 21295448 - 21295415
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||| |||||||    
T  21295448 tactccctccgtccctaattataagaactttttg 21295415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 25247727 - 25247690
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||  |||||||||    
T  25247727 tactccctccgtccctaattataagactcttttgagaa 25247690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 25950831 - 25950868
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  25950831 tactacctccgtccttaattataagacctttttgagaa 25950868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 28061014 - 28060981
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  28061014 tactccctccgtccctaattataagacccttttg 28060981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 31803157 - 31803120
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  31803157 tactacctccgtccctaattataagatctttttgagaa 31803120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 34012554 - 34012517
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  34012554 tactacctccgtccctaattataagacccttttgagaa 34012517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 36711335 - 36711298
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  36711335 tactccctccgttcctaattataagacccttttgagaa 36711298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 38736451 - 38736488
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  38736451 tactacctccctccctaattataagacctttttgagaa 38736488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 46148431 - 46148468
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  46148431 tactacctccgtccctaaatataagacctttttgagaa 46148468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 46415042 - 46415005
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  46415042 tactacctccgtccctaattataagaccattttgagaa 46415005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 280
Target Start/End: Complemental strand, 5473398 - 5473286
Alignment:
Q  168 atctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatgagactaacaacaaacta 267  Q
    ||||||| | ||||||| ||| ||| ||| ||| |||||| ||||||||||||||| | ||||||  || | ||||| ||||   || || |||||||||    
T  5473398 atctcattctaaaagctaacttaaaagataagggtactcatacatatttatacatttagcaacccgagaacttgagcaatatataacaaataacaaacta 5473299  T
Q  268 caaataacttcaa 280  Q
    |||| ||||||||    
T  5473298 caaacaacttcaa 5473286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 340
Target Start/End: Complemental strand, 17878404 - 17878360
Alignment:
Q  296 aaaacattactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| |||||| | |||||||||||||||||||||||||| ||||    
T  17878404 aaaatattactacttccgtccctaattataagacctttttaagaa 17878360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 29155802 - 29155842
Alignment:
Q  240 tgagcgatatgagactaacaacaaactacaaataacttcaa 280  Q
    ||||| |||||||||||||||||||||| ||||||| ||||    
T  29155802 tgagctatatgagactaacaacaaactataaataacatcaa 29155842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 340
Target Start/End: Complemental strand, 31769364 - 31769332
Alignment:
Q  308 cctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||||||||||||||||| |||||||||    
T  31769364 cctccgtccctaattataagacccttttgagaa 31769332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 33381610 - 33381574
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgaga 339  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  33381610 tactacctccgtccctaattataagacccttttgaga 33381574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 340
Target Start/End: Original strand, 41787255 - 41787287
Alignment:
Q  308 cctccgtccctaattataagacctttttgagaa 340  Q
    ||||| |||||||||||||||||||||||||||    
T  41787255 cctccatccctaattataagacctttttgagaa 41787287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 9388828 - 9388765
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    ||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||    
T  9388828 tactccctccgtccctaattataagacctttttgagaattttttttgtccctttttataagacc 9388765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 168 - 230
Target Start/End: Complemental strand, 10742311 - 10742249
Alignment:
Q  168 atctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaac 230  Q
    ||||||||||||||||| | ||||| ||| ||| ||| |||||||||||||||||||||||||    
T  10742311 atctcatcccaaaagctaaatcaaatgattagggtacccaaacatatttatacattcaacaac 10742249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 287451 - 287414
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||||||||||||||||||||||||||||||||    
T  287451 tactccctccgtccctaattataagacctttttgagaa 287414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 5457412 - 5457449
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||||||||||||||||||||||||||||||||    
T  5457412 tactccctccgtccctaattataagacctttttgagaa 5457449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 33487833 - 33487870
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||||||||||||||||||||||||||||||||    
T  33487833 tactccctccgtccctaattataagacctttttgagaa 33487870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 302 - 366
Target Start/End: Complemental strand, 12106102 - 12106038
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||| ||||||||||||||||||||||||||||||||        ||||||||||||||||||    
T  12106102 ttactctctccgtccctaattataagacctttttgagaattttttttgtccctttttataagacc 12106038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 302 - 366
Target Start/End: Complemental strand, 34301870 - 34301806
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    ||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  34301870 ttactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 34301806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 30248647 - 30248710
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  30248647 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 30248710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 231143 - 231105
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  231143 ttactccctccgtccctaattataagacccttttgagaa 231105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 6418169 - 6418135
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||||||||||    
T  6418169 ttactccctccgtccctaattataagacctttttg 6418135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 4844400 - 4844437
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||| |||||||||    
T  4844400 tactccctccgtccctaattataagacccttttgagaa 4844437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 8743188 - 8743225
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||| |||||||||    
T  8743188 tactccctccgtccctaattataagacccttttgagaa 8743225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 11847871 - 11847835
Alignment:
Q  301 attactccctccgtccctaattataagacctttttga 337  Q
    |||||||||||||||||||||||||||||| ||||||    
T  11847871 attactccctccgtccctaattataagacccttttga 11847835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 402658 - 402595
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||| ||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  402658 tactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 402595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 925972 - 925933
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||| ||||||||||||||| |||||||||    
T  925972 attactccctccgttcctaattataagacccttttgagaa 925933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 305 - 340
Target Start/End: Original strand, 6417878 - 6417913
Alignment:
Q  305 ctccctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||||||||||| ||||||||||||||||||    
T  6417878 ctccctccgtccctaatcataagacctttttgagaa 6417913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 9038642 - 9038705
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||| ||        ||||||||||||||||||    
T  9038642 tactccctccgtccctaattataagacccttttgaaaaaatcatttgtccctttttataagacc 9038705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 338
Target Start/End: Complemental strand, 23398176 - 23398141
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgag 338  Q
    |||||||||||||||||||||||||||| |||||||    
T  23398176 tactccctccgtccctaattataagacccttttgag 23398141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 25045680 - 25045617
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||| ||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  25045680 tactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 25045617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 152 - 267
Target Start/End: Complemental strand, 27134406 - 27134291
Alignment:
Q  152 tgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatga 251  Q
    |||||||| | |||||||   |||||||||||| | ||||  |||| |  |||||||||||||||||||| |||||||| |  ||  || ||| || |||    
T  27134406 tgttaaattggcttaaattgtatcccaaaagctgattcaatagatgtgagtactcaaacatatttatacactcaacaactcgagaatctaagcaatgtga 27134307  T
Q  252 gactaacaacaaacta 267  Q
    ||||||||||||||||    
T  27134306 gactaacaacaaacta 27134291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 2090657 - 2090695
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttgagaa 340  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  2090657 ttactacctccgtccctaattataagacccttttgagaa 2090695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 226
Target Start/End: Complemental strand, 11340079 - 11340005
Alignment:
Q  152 tgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaa 226  Q
    ||||||||||| ||| |||| |||| |||| ||  ||||||||||  ||||||||| ||||||||||||| ||||    
T  11340079 tgttaaatagagttagatctgatcctaaaaactagctcaaaggatatggatactcagacatatttatacactcaa 11340005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 9388529 - 9388562
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  9388529 tactccctccgtccctaattataagacccttttg 9388562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 10196030 - 10195993
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||||||| |||||||||||||| |||||||||    
T  10196030 tactccctccgtctctaattataagacccttttgagaa 10195993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 13901641 - 13901678
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  13901641 tactacctccgtccctaattataagacccttttgagaa 13901678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 15498629 - 15498666
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  15498629 tactacctccgtccctaattataagacccttttgagaa 15498666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 19097838 - 19097801
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||||||| |||||||||||||| |||||||||    
T  19097838 tactccctccgtctctaattataagacccttttgagaa 19097801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 23397879 - 23397912
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  23397879 tactccctccgtccctaattataagaccattttg 23397912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 23604460 - 23604497
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  23604460 tactacctccgtccctaattataagacccttttgagaa 23604497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 25197152 - 25197189
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||| | |||||||||    
T  25197152 tactccctccgtccctaattataagatccttttgagaa 25197189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 34741763 - 34741730
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  34741763 tactccctccgtccctaattataagacccttttg 34741730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 34915580 - 34915543
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  34915580 tactacctccgtccctaattataagacccttttgagaa 34915543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 335
Target Start/End: Complemental strand, 12144075 - 12144043
Alignment:
Q  303 tactccctccgtccctaattataagaccttttt 335  Q
    |||||||||||||||||||||||||||| ||||    
T  12144075 tactccctccgtccctaattataagaccctttt 12144043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 13648166 - 13648130
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgaga 339  Q
    |||||||||||||| ||||||||||||| ||||||||    
T  13648166 tactccctccgtccttaattataagacccttttgaga 13648130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 340
Target Start/End: Complemental strand, 17227559 - 17227527
Alignment:
Q  308 cctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||||||||||||||||| |||||||||    
T  17227559 cctccgtccctaattataagacccttttgagaa 17227527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 5664638 - 5664701
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    ||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||    
T  5664638 tactccctccgtccctaattataagacctttttgagaattttttttgtccctttttataagacc 5664701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 2438223 - 2438288
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  2438223 attactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 2438288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 25624733 - 25624770
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25624733 tactccctccgtccctaattataagacctttttgagaa 25624770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 39834038 - 39833973
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    ||||||||||| ||||||||||||||||||||||||||||        ||||||||||||||||||    
T  39834038 attactccctcagtccctaattataagacctttttgagaattttttttgtccctttttataagacc 39833973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 302 - 366
Target Start/End: Complemental strand, 8716930 - 8716866
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    ||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  8716930 ttactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 8716866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 302 - 366
Target Start/End: Original strand, 27560205 - 27560269
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    ||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  27560205 ttactccctccgtccctaattataagacccttttgagaaaaatttttgtccctttttataagacc 27560269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 43829620 - 43829672
Alignment:
Q  176 ccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaaca 228  Q
    |||||||||  ||||||| ||||||||||||||||||||||||||| ||||||    
T  43829620 ccaaaagctagctcaaagaatgaggatactcaaacatatttatacactcaaca 43829672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 302 - 365
Target Start/End: Original strand, 7491843 - 7491906
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagac 365  Q
    ||||||||||||||||||||||||||||| |||||||||        |||||||||||||||||    
T  7491843 ttactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagac 7491906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 34883885 - 34883822
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  34883885 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 34883822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 36131065 - 36131002
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  36131065 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 36131002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 40607702 - 40607765
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  40607702 tactccctccgtccctaattataagacccttttgagaaatttttttgtccctttttataagacc 40607765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 8990204 - 8990241
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||| |||||||||||    
T  8990204 tactccctccgtccctaattataagatctttttgagaa 8990241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 334
Target Start/End: Complemental strand, 10758017 - 10757984
Alignment:
Q  301 attactccctccgtccctaattataagacctttt 334  Q
    ||||||||||||||||||||||||||||||||||    
T  10758017 attactccctccgtccctaattataagacctttt 10757984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 11201683 - 11201720
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||| |||||||||    
T  11201683 tactccctccgtccctaattataagacccttttgagaa 11201720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 17408331 - 17408294
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||| |||||||||    
T  17408331 tactccctccgtccctaattataagacccttttgagaa 17408294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 20252210 - 20252247
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||| |||||||||    
T  20252210 tactccctccgtccctaattataagacccttttgagaa 20252247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 23788967 - 23789032
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||| ||||||||||||| |||||||||        ||||||||||||||||||    
T  23788967 attactccctccgtccttaattataagacccttttgagaaatttttttgtccctttttataagacc 23789032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 34062702 - 34062665
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||| |||||||||    
T  34062702 tactccctccgtccctaattataagacccttttgagaa 34062665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 41450516 - 41450553
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||| |||||||||    
T  41450516 tactccctccgtccctaattataagacccttttgagaa 41450553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 366
Target Start/End: Complemental strand, 8912912 - 8912848
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    ||||| ||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  8912912 ttactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 8912848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 34113825 - 34113789
Alignment:
Q  301 attactccctccgtccctaattataagacctttttga 337  Q
    |||||||||||||||||||||||||||||| ||||||    
T  34113825 attactccctccgtccctaattataagacccttttga 34113789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 336
Target Start/End: Complemental strand, 2438524 - 2438489
Alignment:
Q  301 attactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||||| |||||    
T  2438524 attactccctccgtccctaattataagacccttttg 2438489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 8841694 - 8841631
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||| ||||||||||||| |||||||||        ||||||||||||||||||    
T  8841694 tactccctccgtccttaattataagacccttttgagaattttttttgtccctttttataagacc 8841631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 15228186 - 15228123
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||| | |||||||||        ||||||||||||||||||    
T  15228186 tactccctccgtccctaattataagatccttttgagaattttttttgtccctttttataagacc 15228123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 16805828 - 16805765
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||| | |||||||||        ||||||||||||||||||    
T  16805828 tactccctccgtccctaattataagatccttttgagaattttttttgtccctttttataagacc 16805765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 309 - 340
Target Start/End: Original strand, 17665529 - 17665560
Alignment:
Q  309 ctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||||||||||||||||||||||||||    
T  17665529 ctccgtccctaattataagacctttttgagaa 17665560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 336
Target Start/End: Complemental strand, 22897690 - 22897655
Alignment:
Q  301 attactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||||| |||||    
T  22897690 attactccctccgtccctaattataagacccttttg 22897655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 34113531 - 34113594
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||| ||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  34113531 tactccatccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 34113594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 37229440 - 37229503
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||| ||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  37229440 tactccttccgtccctaattataagaccattttgagaatttcttttgtccctttttataagacc 37229503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 40680727 - 40680790
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||| ||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  40680727 tactccatccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 40680790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 365
Target Start/End: Complemental strand, 26322330 - 26322268
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagac 365  Q
    |||| ||||||||||||||||||||||| |||||||||        |||||||||||||||||    
T  26322330 tactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagac 26322268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 337
Target Start/End: Complemental strand, 29830791 - 29830757
Alignment:
Q  303 tactccctccgtccctaattataagacctttttga 337  Q
    |||| ||||||||||||||||||||||||||||||    
T  29830791 tactacctccgtccctaattataagacctttttga 29830757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 45474350 - 45474384
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttg 336  Q
    ||||||||||||||||||||||||||||| |||||    
T  45474350 ttactccctccgtccctaattataagacccttttg 45474384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 2060316 - 2060353
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  2060316 tactacctccgtccctaattataagacccttttgagaa 2060353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 4711728 - 4711765
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  4711728 tactccctccgtccctaattaaaagacccttttgagaa 4711765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 7116336 - 7116299
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  7116336 tactacctccgtccctaattataagacccttttgagaa 7116299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 7492141 - 7492108
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  7492141 tactccctccgtccctaattataagacccttttg 7492108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 16108215 - 16108248
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  16108215 tactccctccgtccctaattataagacccttttg 16108248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 16845109 - 16845072
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||| | |||||||||    
T  16845109 tactccctccgtccctaattataagatccttttgagaa 16845072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 22897391 - 22897428
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||| | |||||||||    
T  22897391 tactccctccgtccctaattataagatccttttgagaa 22897428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 28566151 - 28566188
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  28566151 tactacctccgtccctaattataagacccttttgagaa 28566188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 219
Target Start/End: Original strand, 30841581 - 30841610
Alignment:
Q  190 aaaggatgaggatactcaaacatatttata 219  Q
    ||||||||||||||||||||||||||||||    
T  30841581 aaaggatgaggatactcaaacatatttata 30841610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 229
Target Start/End: Original strand, 35469415 - 35469492
Alignment:
Q  152 tgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaa 229  Q
    ||||||| ||||||  ||||||||| |||| || ||| ||||||| |  ||| ||||||||||||||||| |||||||    
T  35469415 tgttaaaaagactttgatctcatcctaaaaactaacttaaaggataaaaatattcaaacatatttatacactcaacaa 35469492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 39833739 - 39833772
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  39833739 tactccctccgtccctaattataagacccttttg 39833772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 340
Target Start/End: Complemental strand, 10399506 - 10399462
Alignment:
Q  296 aaaacattactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| |||||| ||||| ||||||||||||||||| |||||||||    
T  10399506 aaaaaattactacctccatccctaattataagacccttttgagaa 10399462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 18374743 - 18374707
Alignment:
Q  301 attactccctccgtccctaattataagacctttttga 337  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  18374743 attactacctccgtccctaattataagacccttttga 18374707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 335
Target Start/End: Complemental strand, 22182961 - 22182929
Alignment:
Q  303 tactccctccgtccctaattataagaccttttt 335  Q
    |||||||||||||||||||||||||||| ||||    
T  22182961 tactccctccgtccctaattataagaccctttt 22182929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 24345717 - 24345681
Alignment:
Q  301 attactccctccgtccctaattataagacctttttga 337  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  24345717 attactacctccgtccctaattataagacccttttga 24345681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 329
Target Start/End: Original strand, 29239331 - 29239359
Alignment:
Q  301 attactccctccgtccctaattataagac 329  Q
    |||||||||||||||||||||||||||||    
T  29239331 attactccctccgtccctaattataagac 29239359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 337
Target Start/End: Original strand, 42629373 - 42629405
Alignment:
Q  305 ctccctccgtccctaattataagacctttttga 337  Q
    |||||||||||||||||||||||||| ||||||    
T  42629373 ctccctccgtccctaattataagacccttttga 42629405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 22465 - 22367
Alignment:
Q  169 tctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatgagactaacaacaaacta 267  Q
    |||||||||||||||| | ||||||||||| | ||||||| |||||||||||| | |||| |||  || ||| |||||| || ||||| ||||||||||    
T  22465 tctcatcccaaaagctaattcaaaggatgaaggtactcaagcatatttatacactgaacatcccgggaacctaagcgatgtgggactagcaacaaacta 22367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 296 - 366
Target Start/End: Complemental strand, 43060455 - 43060385
Alignment:
Q  296 aaaacattactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  43060455 aaaacattactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 43060385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 1265947 - 1266012
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  1265947 attactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 1266012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 265
Target Start/End: Original strand, 28431955 - 28432068
Alignment:
Q  152 tgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatga 251  Q
    |||||||||| ||| ||| |||| |||||||||   | ||||||||||||||||||| |||||||||||| ||| || |||| || ||| ||| || |||    
T  28431955 tgttaaataggcttgaatttcattccaaaagctagtttaaaggatgaggatactcaagcatatttatacactcagcagcccaggaacctaagcaatgtga 28432054  T
Q  252 gactaacaacaaac 265  Q
    ||| || |||||||    
T  28432055 gacaaataacaaac 28432068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 32147294 - 32147331
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32147294 tactccctccgtccctaattataagacctttttgagaa 32147331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 6673265 - 6673202
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  6673265 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 6673202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 9828393 - 9828456
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  9828393 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 9828456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 16127259 - 16127322
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  16127259 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 16127322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 22527692 - 22527755
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  22527692 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 22527755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 40004446 - 40004383
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  40004446 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 40004383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 277
Target Start/End: Original strand, 8402141 - 8402247
Alignment:
Q  171 tcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatgagactaacaacaaactacaa 270  Q
    |||||||||||| |  ||||||||| |||| |||||||||||||||||||| || ||| |||   | |||||| ||| ||  | ||||||||||||||||    
T  8402141 tcatcccaaaagttagctcaaaggaggagggtactcaaacatatttatacactcgacagcccgaaaacctgagagatgtggaagtaacaacaaactacaa 8402240  T
Q  271 ataactt 277  Q
    | |||||    
T  8402241 acaactt 8402247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 5527974 - 5528011
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||| |||||||||||||||||||||||    
T  5527974 tactccctccgtccttaattataagacctttttgagaa 5528011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 7951561 - 7951598
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttgaga 339  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  7951561 ttactccctccgtccctaattataagacccttttgaga 7951598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 14913648 - 14913685
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||| |||||||||    
T  14913648 tactccctccgtccctaattataagacccttttgagaa 14913685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 23286513 - 23286448
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||| ||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  23286513 attactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 23286448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 26894910 - 26894873
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||| |||||||||    
T  26894910 tactccctccgtccctaattataagacccttttgagaa 26894873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 366
Target Start/End: Complemental strand, 4985150 - 4985090
Alignment:
Q  306 tccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    ||||||||||||||||||||| |||||||||||||        ||||||||||||||||||    
T  4985150 tccctccgtccctaattataaaacctttttgagaattttttttgtccctttttataagacc 4985090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 10734562 - 10734526
Alignment:
Q  301 attactccctccgtccctaattataagacctttttga 337  Q
    |||||||||||||||||||||||||||||| ||||||    
T  10734562 attactccctccgtccctaattataagacccttttga 10734526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 335
Target Start/End: Complemental strand, 13661156 - 13661124
Alignment:
Q  303 tactccctccgtccctaattataagaccttttt 335  Q
    |||||||||||||||||||||||||||||||||    
T  13661156 tactccctccgtccctaattataagaccttttt 13661124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 34662204 - 34662240
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgaga 339  Q
    |||||||||||||||||||||||||||| ||||||||    
T  34662204 tactccctccgtccctaattataagacccttttgaga 34662240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 3497837 - 3497774
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||| ||||||||||||||| |||||||||        ||||||||||||||||||    
T  3497837 tactccctccgttcctaattataagacccttttgagaaatttttttgtccctttttataagacc 3497774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 309 - 340
Target Start/End: Original strand, 4194688 - 4194719
Alignment:
Q  309 ctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||||||||||||||||||||||||||    
T  4194688 ctccgtccctaattataagacctttttgagaa 4194719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 337
Target Start/End: Complemental strand, 14570928 - 14570893
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttga 337  Q
    ||||| ||||||||||||||||||||||||||||||    
T  14570928 ttactacctccgtccctaattataagacctttttga 14570893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 15190852 - 15190789
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||||  |||||||||        ||||||||||||||||||    
T  15190852 tactccctccgtccctaattataagactcttttgagaattttttttgtccctttttataagacc 15190789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 16153292 - 16153229
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||| ||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  16153292 tactccatccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 16153229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 41641095 - 41641158
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||||| | |||||||||        ||||||||||||||||||    
T  41641095 tactccctccgtccctaattataagatcattttgagaattttttttgtccctttttataagacc 41641158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 365
Target Start/End: Original strand, 3028013 - 3028075
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagac 365  Q
    |||| ||||||||||||||||||||||| |||||||||        |||||||||||||||||    
T  3028013 tactacctccgtccctaattataagacccttttgagaaaaaaatttgtccctttttataagac 3028075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 337
Target Start/End: Original strand, 9020694 - 9020728
Alignment:
Q  303 tactccctccgtccctaattataagacctttttga 337  Q
    |||||||||||||||||||||||||||| ||||||    
T  9020694 tactccctccgtccctaattataagacccttttga 9020728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 19571978 - 19571940
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgaga 339  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  19571978 attactacctccgtccctaattataagacccttttgaga 19571940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 366
Target Start/End: Original strand, 31642192 - 31642250
Alignment:
Q  308 cctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||||| ||||||||        ||||||||||||||||||    
T  31642192 cctccgtccctaattataagacctctttgagaaaaaaaattgtccctttttataagacc 31642250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 186395 - 186362
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  186395 tactccctccgtccctaattataagacccttttg 186362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 6424045 - 6423984
Alignment:
Q  167 aatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaaca 228  Q
    |||||||||| |||| ||  || ||| ||||| |||||||||||||||||||||| ||||||    
T  6424045 aatctcatcctaaaaactagcttaaaagatgatgatactcaaacatatttatacactcaaca 6423984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 8949812 - 8949849
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  8949812 tactacctccgtccctaattataagacccttttgagaa 8949849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 9828690 - 9828657
Alignment:
Q  303 tactccctccgtccctaattataagacctttttg 336  Q
    |||||||||||||||||||||||||||| |||||    
T  9828690 tactccctccgtccctaattataagacccttttg 9828657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 13863032 - 13862995
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  13863032 tactccctccgtccctaattatatgacccttttgagaa 13862995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 15521979 - 15521942
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  15521979 tactccctccgtccctaattataaaacccttttgagaa 15521942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 16440931 - 16440968
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  16440931 tactccctccgtccctaattataagacccttttaagaa 16440968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 23260175 - 23260138
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  23260175 tactacctccgtccctaattataagacccttttgagaa 23260138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 25601097 - 25601060
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  25601097 tactccctccgttcctaattataagacccttttgagaa 25601060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 41384209 - 41384172
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||| | |||||||||    
T  41384209 tactccctccgtccctaattataagatccttttgagaa 41384172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 32964133 - 32964169
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgaga 339  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  32964133 tactacctccgtccctaattataagaccattttgaga 32964169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 65674 - 65637
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    ||||||||||||||||||||||||||||||||||||||    
T  65674 tactccctccgtccctaattataagacctttttgagaa 65637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 65377 - 65411
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttg 336  Q
    ||||||||||||||||||||||||||||| |||||    
T  65377 ttactccctccgtccctaattataagacccttttg 65411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 365
Target Start/End: Original strand, 47640 - 47702
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagac 365  Q
    |||||||||||||||||||||||||||| |||||||||        |||||||||||||||||    
T  47640 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagac 47702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 3819 - 3782
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||| |||||||||    
T  3819 tactccctccgtccctaattataagacccttttgagaa 3782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 3518 - 3559
Alignment:
Q  296 aaaacattactccctccgtccctaattataagacctttttga 337  Q
    |||| ||||||||||||||||||||||||| |||| ||||||    
T  3518 aaaaaattactccctccgtccctaattataggacccttttga 3559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 3924 - 3985
Alignment:
Q  167 aatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaaca 228  Q
    |||||||||  ||||| | ||| ||||||||||| ||||||||||||||| |||||||||||    
T  3924 aatctcatcttaaaagttaacttaaaggatgagggtactcaaacatatttgtacattcaaca 3985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 1547 - 1608
Alignment:
Q  167 aatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaaca 228  Q
    |||||||||  ||||| | ||| ||||||||||| ||||||||||||||| |||||||||||    
T  1547 aatctcatcttaaaagttaacttaaaggatgagggtactcaaacatatttgtacattcaaca 1608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 7662 - 7723
Alignment:
Q  167 aatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaaca 228  Q
    |||||||||  ||||| | ||| ||||||||||| ||||||||||||||| |||||||||||    
T  7662 aatctcatcttaaaagttaacttaaaggatgagggtactcaaacatatttgtacattcaaca 7723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 12065 - 12102
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||| |||||||||    
T  12065 tactccctccgtccctaattataagacccttttgagaa 12102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 51719 - 51682
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||| |||||||||    
T  51719 tactccctccgtccctaattataagacccttttgagaa 51682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 259159 - 259122
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||||||||||||||||||||||||| |||||||||    
T  259159 tactccctccgtccctaattataagacccttttgagaa 259122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 5149 - 5188
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  5149 attactacctccgtccctaattataagacccttttgagaa 5188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 32; Significance: 0.000000008; HSPs: 3)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 10221 - 10182
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  10221 attactacctccgtccctaattataagacccttttgagaa 10182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 226
Target Start/End: Complemental strand, 1178 - 1104
Alignment:
Q  152 tgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaa 226  Q
    ||||||||||| ||| |||| |||| |||| ||  ||||||||||  ||||||||| ||||||||||||| ||||    
T  1178 tgttaaatagagttagatctgatcctaaaaactagctcaaaggatatggatactcagacatatttatacactcaa 1104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 226
Target Start/End: Complemental strand, 3268 - 3194
Alignment:
Q  152 tgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaa 226  Q
    ||||||||||| ||| |||| |||| |||| ||  ||||||||||  ||||||||| ||||||||||||| ||||    
T  3268 tgttaaatagagttagatctgatcctaaaaactagctcaaaggatatggatactcagacatatttatacactcaa 3194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 14385 - 14322
Alignment:
Q  303 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||| ||||||||||||| |||||||||        ||||||||||||||||||    
T  14385 tactccctccgtccttaattataagacccttttgagaattttttctgtccctttttataagacc 14322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 18495 - 18534
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  18495 attactacctccgtccctaattataagacccttttgagaa 18534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 3436 - 3475
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaa 340  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  3436 attactacctccgtccctaattataagacccttttgagaa 3475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 334
Target Start/End: Complemental strand, 61888 - 61857
Alignment:
Q  303 tactccctccgtccctaattataagacctttt 334  Q
    ||||||||||||||||||||||||||||||||    
T  61888 tactccctccgtccctaattataagacctttt 61857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 7178 - 7140
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttgagaa 340  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  7178 ttacttcctccgtccctaattataagacccttttgagaa 7140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 48653 - 48691
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttgagaa 340  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  48653 ttactacctccgtccctaattataagacccttttgagaa 48691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 104099 - 104061
Alignment:
Q  302 ttactccctccgtccctaattataagacctttttgagaa 340  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  104099 ttactacctccgtccctaattataagatctttttgagaa 104061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 337
Target Start/End: Complemental strand, 355368 - 355334
Alignment:
Q  303 tactccctccgtccctaattataagacctttttga 337  Q
    |||||||||||||||||||||||||||| ||||||    
T  355368 tactccctccgtccctaattataagacccttttga 355334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 8216 - 8281
Alignment:
Q  301 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 366  Q
    |||||||||||||||||||||| ||||||| |||||| ||        ||||||||||||||||||    
T  8216 attactccctccgtccctaattgtaagacccttttgaaaaaaaaatttgtccctttttataagacc 8281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University