View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1504_1D_high_8 (Length: 424)
Name: NF1504_1D_high_8
Description: NF1504_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1504_1D_high_8 |
 | |
|
| [»] scaffold0237 (1 HSPs) |
| | |
|
| [»] scaffold0054 (2 HSPs) |
| | |
|
| [»] scaffold0051 (3 HSPs) |
| | |
|
| [»] scaffold0573 (1 HSPs) |
| | |
|
| [»] scaffold0654 (1 HSPs) |
| | |
|
| [»] scaffold0014 (4 HSPs) |
| | |
|
| [»] scaffold0429 (2 HSPs) |
| | |
|
| [»] scaffold0308 (1 HSPs) |
| | |
|
| [»] scaffold0019 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 350; Significance: 0; HSPs: 47)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 1 - 402
Target Start/End: Original strand, 31000061 - 31000462
Alignment:
| Q |
1 |
ttcatccaccattttaatcttacaaaatccattaatcatggtagtatagctctgaacattagccatgactcccctcgcggccatactatcgaatatttcc |
100 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
31000061 |
ttcatccaccattttaatcttgcaaaatccattaatcatggtagtatagctctgaacattagccatgactccccttgcggccatactatcgaatatttcc |
31000160 |
T |
|
| Q |
101 |
ttggccttgttcacttcgttaatcaaacaatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaata |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||| |
|
|
| T |
31000161 |
ttggccttgttcacttcgttaatcaaacaatatccatccattaaagagctataagtaacaacacgaggctttatgtcgtctttgatcatcatggctaata |
31000260 |
T |
|
| Q |
201 |
catttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttatt |
300 |
Q |
| |
|
|||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31000261 |
catttttagcttctttcaccctaccatccttacaaaaaccatcaaccagtatattaaaggtatacacatccgggttgatgttttccgctgtcattttatt |
31000360 |
T |
|
| Q |
301 |
gaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggccaattctcttagcaaccatt |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
31000361 |
gaacaaaccaattgcatcattcaatttagaaacagcagaaaaaccactaattaaagcattgtaagtgaaaacatcaaggccaattctcttagcaaccatt |
31000460 |
T |
|
| Q |
401 |
tc |
402 |
Q |
| |
|
|| |
|
|
| T |
31000461 |
tc |
31000462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 401
Target Start/End: Original strand, 24890369 - 24890769
Alignment:
| Q |
1 |
ttcatccaccattttaatcttacaaaatccattaatcatggtagtatagctctgaacattagccatgactcccctcgcggccatactatcgaatatttcc |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||| | |||||||||||| ||||| ||| |
|
|
| T |
24890369 |
ttcatccaccattttaatcttacaaaatccattaaccatggtagtatagatctgaacattagcaatgactccccctgaggccatactatcaaatatatcc |
24890468 |
T |
|
| Q |
101 |
ttggccttgttcacttcgttaatcaaacaatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaata |
200 |
Q |
| |
|
|||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| || ||||| | |
|
|
| T |
24890469 |
ttggccttgttcactttgtttatcgaacaatatccatccattaaagagttataagtaacaacatcaggttttatgtcgtctttcatcattatagctaaca |
24890568 |
T |
|
| Q |
201 |
catttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttatt |
300 |
Q |
| |
|
| |||| | || |||||| | || ||||| ||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| | |||||||||| |
|
|
| T |
24890569 |
ctactttagcatcattcacctttccttccttacaaaagccatcaaccagtatattaaaggtatacacatttgggttgatgttttcctttttcattttatt |
24890668 |
T |
|
| Q |
301 |
gaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggccaattctcttagcaaccatt |
400 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
24890669 |
gaacaaatcaattgcatagttcaatttagaaacagcggaaaaaccactaattaaagcattgtaagtgaaaacatcagggcaaattctcttagcaaccatt |
24890768 |
T |
|
| Q |
401 |
t |
401 |
Q |
| |
|
| |
|
|
| T |
24890769 |
t |
24890769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 4 - 402
Target Start/End: Original strand, 24272073 - 24272471
Alignment:
| Q |
4 |
atccaccattttaatcttacaaaatccattaatcatggtagtatagctctgaacattagccatgactcccctcgcggccatactatcgaatatttccttg |
103 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||| || | |||||| |||||||||| | |||||||| | |||| | | |||||| |||| |
|
|
| T |
24272073 |
atccaccattttaatcttacaaaatctattaatcatgatactgtagctccgaacattagcggtcactcccctatgagacatagtgttgaatatactcttg |
24272172 |
T |
|
| Q |
104 |
gccttgttcacttcgttaatcaaacaatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacat |
203 |
Q |
| |
|
|||||||||||||| || | || |||||||| ||||||||||||||||||||||||||| | ||| || ||| | | |||||||||||| ||||| ||| |
|
|
| T |
24272173 |
gccttgttcacttcatttaccagacaatatcgatccattaaagagttataagtaacaacgtcaggtttaatgccttgtttcatcatcatagctaacccat |
24272272 |
T |
|
| Q |
204 |
ttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaa |
303 |
Q |
| |
|
||||| ||||||||||||| || ||||| ||||| ||||||||| ||||||||| || |||||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
24272273 |
ttttagcttctttcacccttccttccttacaaaatgcatcaaccaatatattaaaagtatacacatcagggttgatgttttccgatgtcattttattgaa |
24272372 |
T |
|
| Q |
304 |
caaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggccaattctcttagcaaccatttc |
402 |
Q |
| |
|
||||||||||||||| ||||||||| |||| || ||||||| ||||||||||||| |||||| |||||||||| ||||||||||| ||||||||| |
|
|
| T |
24272373 |
caaaccaattgcatctttcaatttaccaacaatgcaaaaaccattaattaaagcattataagtgttaacatcagggaaaattctcttagaaaccatttc |
24272471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 1 - 402
Target Start/End: Complemental strand, 29882311 - 29881910
Alignment:
| Q |
1 |
ttcatccaccattttaatcttacaaaatccattaatcatggtagtatagctctgaacattagccatgactcccctcgcggccatactatcgaatatttcc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||| | |||||||| | |||| | | |||||| | |
|
|
| T |
29882311 |
ttcatccaccattttaatcttacaaaatccattaatcatgatactgtagctctgaacattagcagtcactcccctatgagacatagtgttgaatatactc |
29882212 |
T |
|
| Q |
101 |
ttggccttgttcacttcgttaatcaaacaatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaata |
200 |
Q |
| |
|
| ||||||||||||||| || | || |||||||||||||||||||||| | ||||||||||||| ||| || ||| | | |||||||||||| ||||| | |
|
|
| T |
29882211 |
tcggccttgttcacttcatttaccagacaatatccatccattaaagagctgtaagtaacaacatcaggtttaatgccttgtttcatcatcatagctaaca |
29882112 |
T |
|
| Q |
201 |
catttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttatt |
300 |
Q |
| |
|
|||||||| ||||||||||||| || ||||| ||||| |||||||||| |||| ||||||| ||||||| ||| |||||||||||| | |||||||||| |
|
|
| T |
29882111 |
catttttagcttctttcacccttccttccttacaaaatccatcaaccaatatactaaaggtatacacattcggattgatgttttccaatatcattttatt |
29882012 |
T |
|
| Q |
301 |
gaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggccaattctcttagcaaccatt |
400 |
Q |
| |
|
|||||| |||||||||| ||||||||| |||| || ||| ||||||||||||||| | ||||||| ||||| ||| ||||||||| ||| ||||| |
|
|
| T |
29882011 |
aaacaaatcaattgcatctttcaatttaccaacaatgcaaaatccactaattaaagcactataagtgacaacattaggagaaattctctttgcagccatt |
29881912 |
T |
|
| Q |
401 |
tc |
402 |
Q |
| |
|
|| |
|
|
| T |
29881911 |
tc |
29881910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 1 - 402
Target Start/End: Complemental strand, 29909467 - 29909066
Alignment:
| Q |
1 |
ttcatccaccattttaatcttacaaaatccattaatcatggtagtatagctctgaacattagccatgactcccctcgcggccatactatcgaatatttcc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||| | |||||||| | |||| | | |||||| | |
|
|
| T |
29909467 |
ttcatccaccattttaatcttacaaaatccattaatcatgatactgtagctctgaacattagcagtcactcccctatgagacatagtgttgaatatactc |
29909368 |
T |
|
| Q |
101 |
ttggccttgttcacttcgttaatcaaacaatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaata |
200 |
Q |
| |
|
| ||||||||||||||| || | || |||||||||||||||||||||| | ||||||||||||| ||| || ||| | | |||||||||||| ||||| | |
|
|
| T |
29909367 |
tcggccttgttcacttcatttaccagacaatatccatccattaaagagctgtaagtaacaacatcaggtttaatgccttgtttcatcatcatagctaaca |
29909268 |
T |
|
| Q |
201 |
catttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttatt |
300 |
Q |
| |
|
|||||||| ||||||||||||| || ||||| ||||| |||||||||| |||| ||||||| ||||||| ||| |||||||||||| | |||||||||| |
|
|
| T |
29909267 |
catttttagcttctttcacccttccttccttacaaaatccatcaaccaatatactaaaggtatacacattcggattgatgttttccaatatcattttatt |
29909168 |
T |
|
| Q |
301 |
gaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggccaattctcttagcaaccatt |
400 |
Q |
| |
|
|||||| |||||||||| ||||||||| |||| || ||| ||||||||||||||| | ||||||| ||||| ||| ||||||||| ||| ||||| |
|
|
| T |
29909167 |
aaacaaatcaattgcatctttcaatttaccaacaatgcaaaatccactaattaaagcactataagtgacaacattaggagaaattctctttgcagccatt |
29909068 |
T |
|
| Q |
401 |
tc |
402 |
Q |
| |
|
|| |
|
|
| T |
29909067 |
tc |
29909066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 91 - 402
Target Start/End: Original strand, 24886734 - 24887045
Alignment:
| Q |
91 |
gaatatttccttggccttgttcacttcgttaatcaaacaatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatc |
190 |
Q |
| |
|
|||||| ||||||||| |||||| ||| |||| || |||||||||| |||||||| ||||||||| |||||| |||| || ||| ||| |||||||||| |
|
|
| T |
24886734 |
gaatatatccttggccatgttcatttctttaactaagcaatatccattcattaaagtgttataagtgacaacactaggtttgatgccgtgtttcatcatc |
24886833 |
T |
|
| Q |
191 |
atggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctg |
290 |
Q |
| |
|
|| | ||| |||| |||| |||||||||||||||| ||||| |||||| |||||||| |||||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
24886834 |
atagataacacatatttagcttctttcaccctaccttccttacaaaaagcatcaaccgatatattaaaggtatacacatccgggttgatattttccgctg |
24886933 |
T |
|
| Q |
291 |
tcattttattgaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggccaattctctt |
390 |
Q |
| |
|
|||||||||||||||| ||||||| ||||||||||||| |||| || ||||||||||||||||||| ||||||||| ||||||||| ||||||||| |
|
|
| T |
24886934 |
tcattttattgaacaacccaattgtatcattcaatttaccaacaatgcaaaaaccactaattaaagcactgtaagtgataacatcaggagaaattctctt |
24887033 |
T |
|
| Q |
391 |
agcaaccatttc |
402 |
Q |
| |
|
|| |||||||| |
|
|
| T |
24887034 |
cgcgaccatttc |
24887045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 375
Target Start/End: Original strand, 29348721 - 29349095
Alignment:
| Q |
1 |
ttcatccaccattttaatcttacaaaatccattaatcatggtagtatagctctgaacattagccatgactcccctcgcggccatactatcgaatatttcc |
100 |
Q |
| |
|
|||||| ||| |||||||||||||||| || ||||||||| || | ||||||||||||||||| | ||||||| | |||||| | | |||||| | |
|
|
| T |
29348721 |
ttcatcaacctttttaatcttacaaaacccgttaatcatgatattgtagctctgaacattagcagtcactcccccctgagccatagtgttgaatatactc |
29348820 |
T |
|
| Q |
101 |
ttggccttgttcacttcgttaatcaaacaatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaata |
200 |
Q |
| |
|
|| ||||| ||||||| |||| | ||||||||||||||||||||| |||||||||||||| ||| || ||| | | |||||||||||| ||||| | |
|
|
| T |
29348821 |
ttagccttattcacttgtttaactaggcaatatccatccattaaagagcaataagtaacaacatcaggtttaatgccttgtttcatcatcatagctaaca |
29348920 |
T |
|
| Q |
201 |
catttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttatt |
300 |
Q |
| |
|
|||||||| ||||||||||||| || ||||| ||||| |||||||||| |||| ||||||| |||||||| |||||||| | ||||| | |||||||||| |
|
|
| T |
29348921 |
catttttagcttctttcacccttccttccttacaaaatccatcaaccaatatactaaaggtatacacatcagggttgatttcttccgatatcattttatt |
29349020 |
T |
|
| Q |
301 |
gaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatc |
375 |
Q |
| |
|
|||||||||||||||||||||||||||| || | || ||||||||||||||||||| ||||||| | |||||| |
|
|
| T |
29349021 |
gaacaaaccaattgcatcattcaatttaccaagaatgcaaaaaccactaattaaagcactgtaagtaacaacatc |
29349095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 4 - 368
Target Start/End: Original strand, 24263878 - 24264242
Alignment:
| Q |
4 |
atccaccattttaatcttacaaaatccattaatcatggtagtatagctctgaacattagccatgactcccctcgcggccatactatcgaatatttccttg |
103 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || | |||||| ||||| |||| | |||||||| | |||| | | ||||| |||| |
|
|
| T |
24263878 |
atccaccattttaatcttacaaaatccattaatcacaatattgtagctccgaacagtagcagtcactcccctatgagacatagtgtttaatatactcttg |
24263977 |
T |
|
| Q |
104 |
gccttgttcacttcgttaatcaaacaatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacat |
203 |
Q |
| |
|
||| |||||||||| || | || ||||||||||||||||||||||||||||||||||| | ||| || ||| | | |||||||||||| ||||| ||| |
|
|
| T |
24263978 |
gccatgttcacttcatttaccagacaatatccatccattaaagagttataagtaacaatgtcaggtttaatgccttgtttcatcatcatagctaacccat |
24264077 |
T |
|
| Q |
204 |
ttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaa |
303 |
Q |
| |
|
||||| ||||||||||||| || ||||| ||||| ||||||||| ||||||||| || |||||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
24264078 |
ttttagcttctttcacccttccttccttacaaaatgcatcaaccaatatattaaaagtatacacatcagggttgatgttttccgatgtcattttattgaa |
24264177 |
T |
|
| Q |
304 |
caaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtga |
368 |
Q |
| |
|
||||||||||||||| ||||||||| |||| || ||| ||||||||||||||| | ||||||| |
|
|
| T |
24264178 |
caaaccaattgcatctttcaatttaccaacaatgcaaaagccactaattaaagcactataagtga |
24264242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 128 - 402
Target Start/End: Complemental strand, 29834964 - 29834690
Alignment:
| Q |
128 |
caatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccat |
227 |
Q |
| |
|
||||||||||||||||||| | |||||||||||||||| || || ||| | | |||||||||||| ||||| ||||||||| ||||||||| | || | |
|
|
| T |
29834964 |
caatatccatccattaaagcgctataagtaacaacattgggtttcatgccttgtttcatcatcatagctaacacatttttagcttctttcatttttcctt |
29834865 |
T |
|
| Q |
228 |
ccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattt |
327 |
Q |
| |
|
|||| ||||| ||||||||| |||||||||||| |||| ||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
29834864 |
ccttacaaaatgcatcaaccaatatattaaaggtatacatatcagggttgatgttttccaatgtcattttattgaacaaaccaattgcatctttcaattt |
29834765 |
T |
|
| Q |
328 |
agaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggccaattctcttagcaaccatttc |
402 |
Q |
| |
|
| |||| || ||| |||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
29834764 |
accaacaatgcaaaagccactaatcaaagcattgtaagtgaaaacatcaggggaaattctcttagaaaccatttc |
29834690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 128 - 402
Target Start/End: Complemental strand, 29866398 - 29866124
Alignment:
| Q |
128 |
caatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccat |
227 |
Q |
| |
|
||||||||||||||||||| | |||||||||||||||| || || ||| | | |||||||||||| ||||| ||||||||| ||||||||| | || | |
|
|
| T |
29866398 |
caatatccatccattaaagcgctataagtaacaacattgggtttcatgccttgtttcatcatcatagctaacacatttttagcttctttcatttttcctt |
29866299 |
T |
|
| Q |
228 |
ccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattt |
327 |
Q |
| |
|
|||| ||||| ||||||||| |||||||||||| |||| ||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
29866298 |
ccttacaaaatgcatcaaccaatatattaaaggtatacatatcagggttgatgttttccaatgtcattttattgaacaaaccaattgcatctttcaattt |
29866199 |
T |
|
| Q |
328 |
agaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggccaattctcttagcaaccatttc |
402 |
Q |
| |
|
| |||| || ||| |||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
29866198 |
accaacaatgcaaaagccactaatcaaagcattgtaagtgaaaacatcaggggaaattctcttagaaaccatttc |
29866124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 10 - 402
Target Start/End: Complemental strand, 29887164 - 29886772
Alignment:
| Q |
10 |
cattttaatcttacaaaatccattaatcatggtagtatagctctgaacattagccatgactcccctcgcggccatactatcgaatatttccttggccttg |
109 |
Q |
| |
|
||||||||||||||||||||||||||||||| || | |||||| ||||||||| | |||||||| | |||| | |||||| ||||||| ||| |
|
|
| T |
29887164 |
cattttaatcttacaaaatccattaatcatgatattgtagctccaaacattagcagtcactcccctaagagacatagtgctgaatatacccttggcattg |
29887065 |
T |
|
| Q |
110 |
ttcacttcgttaatcaaacaatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttat |
209 |
Q |
| |
|
|||||||| |||| | ||||||||||||||||||||| ||||||||||| ||||||| || ||| | | |||||||||||| ||||| ||||||||| |
|
|
| T |
29887064 |
ttcacttcattaactaggcaatatccatccattaaagagctataagtaacagcattaggattgatgccttgtttcatcatcatagctaacacatttttag |
29886965 |
T |
|
| Q |
210 |
cttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaacc |
309 |
Q |
| |
|
| ||||| || | || ||||| ||||| ||||||||| ||||||||| || |||||| ||||||||||||| || ||||||||||||||| ||| | |
|
|
| T |
29886964 |
cctcttttacgtttccttccttacaaaatgcatcaaccaatatattaaaagtatacacagttgggttgatgtttttcgatgtcattttattgaataaatc |
29886865 |
T |
|
| Q |
310 |
aattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggccaattctcttagcaaccatttc |
402 |
Q |
| |
|
| ||||||| ||||||||| |||| || ||| |||||||||||||||||||||||||||||||| ||| ||||||||||| | ||||||| |
|
|
| T |
29886864 |
agttgcatctttcaatttaccaacaatgcaaaagccactaattaaagcattgtaagtgaaaacatcggggaaaattctcttagaagccatttc |
29886772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 402
Target Start/End: Complemental strand, 29929149 - 29928748
Alignment:
| Q |
1 |
ttcatccaccattttaatcttacaaaatccattaatcatggtagtatagctctgaacattagccatgactcccctcgcggccatactatcgaatatttcc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || | ||||||| | ||||||| | |||||||| | |||| | | |||||| | |
|
|
| T |
29929149 |
ttcatccaccattttaatcttacaaaatccattaatcatgatactgtagctcttagcattagcagtcactcccctatgagacatagtgttgaatatactc |
29929050 |
T |
|
| Q |
101 |
ttggccttgttcacttcgttaatcaaacaatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaata |
200 |
Q |
| |
|
| ||||||||||||||| || | | |||||||||||||||||||||| | ||||||||||||| ||| || ||| | | |||||||||||| ||||| | |
|
|
| T |
29929049 |
tcggccttgttcacttcatttacaagacaatatccatccattaaagagctgtaagtaacaacatcaggtttaatgccttgtttcatcatcatagctaaca |
29928950 |
T |
|
| Q |
201 |
catttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttatt |
300 |
Q |
| |
|
|||||||| ||||||||||||| || ||||| ||||| |||||||||| |||| ||||||| |||| || ||| ||||||||| | | |||||||||| |
|
|
| T |
29928949 |
catttttagcttctttcacccttccttccttacaaaatccatcaaccaatatactaaaggtatacaaatacggaatgatgttttacaatatcattttatt |
29928850 |
T |
|
| Q |
301 |
gaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggccaattctcttagcaaccatt |
400 |
Q |
| |
|
|| ||| ||| |||||| ||||||||| |||| || ||| ||||||||||||||| | ||||||| ||||| ||| ||||||||| ||||||||| |
|
|
| T |
29928849 |
aaaaaaatcaaatgcatctttcaatttaccaacaatgcaaaatccactaattaaagcactataagtgacaacattaggagaaattctctttgcaaccatt |
29928750 |
T |
|
| Q |
401 |
tc |
402 |
Q |
| |
|
|| |
|
|
| T |
29928749 |
tc |
29928748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 326
Target Start/End: Complemental strand, 24730731 - 24730406
Alignment:
| Q |
1 |
ttcatccaccattttaatcttacaaaatccattaatcatggtagtatagctctgaacattagccatgactcccctcgcggccatactatcgaatatttcc |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||| | |||||||||||||||||| || |
|
|
| T |
24730731 |
ttcatccaccattttaatcttacataatccattaatcatggtggtatagctctgaacattagcaatgactccccttgaggccatactatcgaatatatct |
24730632 |
T |
|
| Q |
101 |
ttggccttgttcacttcgttaatcaaacaatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaata |
200 |
Q |
| |
|
||||||||||| | ||| |||| || ||||||||||||||||||||||||||||||||||||| | | | ||||| | ||||||| ||| |||| | |
|
|
| T |
24730631 |
ttggccttgttaatttctttaactaagcaatatccatccattaaagagttataagtaacaacatcaagtataatgtcttttttcatcgtcacacctaaca |
24730532 |
T |
|
| Q |
201 |
catttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttatt |
300 |
Q |
| |
|
||||| ||||||||||| | || ||||| |||||| ||||||||| ||| |||| || |||| | |||||||||||||| | ||||||| | |
|
|
| T |
24730531 |
tcattttagcttctttcacctttccttccttacaaaaagcatcaaccaatatgctaaatgtatacatacgagggttgatgttttctaatatcattttgtg |
24730432 |
T |
|
| Q |
301 |
gaacaaaccaattgcatcattcaatt |
326 |
Q |
| |
|
|||||||||| ||| || ||||||| |
|
|
| T |
24730431 |
taacaaaccaactgcctctttcaatt |
24730406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 128 - 402
Target Start/End: Complemental strand, 29897826 - 29897557
Alignment:
| Q |
128 |
caatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccat |
227 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| || ||||| | |||||||||||| || || ||||||||| ||||||||||||| | |
|
|
| T |
29897826 |
caatatccatccattaaagagttataagtaaaaacattaggtttaatgtcttgtttcatcatcatagcaaacacatttttagcttctttcaccct----t |
29897731 |
T |
|
| Q |
228 |
ccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattt |
327 |
Q |
| |
|
|||| ||||| |||||||||| |||| ||||||| |||||||||||| ||||||||| | | |||||||||||||||||||||||||||| |||||||| |
|
|
| T |
29897730 |
ccttacaaaatccatcaacca-tatactaaaggtatacacatccgggatgatgtttttcaatatcattttattgaacaaaccaattgcatctttcaattt |
29897632 |
T |
|
| Q |
328 |
agaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggccaattctcttagcaaccatttc |
402 |
Q |
| |
|
| |||| || ||| ||| ||||||||||| ||||||| | |||| | || ||||||||| ||||||||||| |
|
|
| T |
29897631 |
accaacaatgcaaaagccaataattaaagcactgtaagtaacaacaccgggataaattctctttgcaaccatttc |
29897557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 128 - 378
Target Start/End: Complemental strand, 29073512 - 29073262
Alignment:
| Q |
128 |
caatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccat |
227 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||| || ||| | | |||||||||||| || || ||| ||||| ||||||||| | | || | |
|
|
| T |
29073512 |
caatatccatccattaaagagcaataagtaacaacattaggtttaatgccttgtttcatcatcatagcaaacacagttttaccttctttcatctttccgt |
29073413 |
T |
|
| Q |
228 |
ccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattt |
327 |
Q |
| |
|
|||| ||||| |||||||||| ||||||||| || ||||||||||| |||||||||||| | |||||||||| |||| | |||||||||| |||| ||| |
|
|
| T |
29073412 |
ccttacaaaatccatcaaccaatatattaaaagtatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagttt |
29073313 |
T |
|
| Q |
328 |
agaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagg |
378 |
Q |
| |
|
| |||| || ||| ||||||||||||||| ||||||| | ||||||||| |
|
|
| T |
29073312 |
accaacaatgaaaaacccactaattaaagcactgtaagtaacaacatcagg |
29073262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 128 - 378
Target Start/End: Complemental strand, 29106085 - 29105835
Alignment:
| Q |
128 |
caatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccat |
227 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||| || ||| | | |||||||||||| || || ||| ||||| ||||||||| | | || | |
|
|
| T |
29106085 |
caatatccatccattaaagagcaataagtaacaacattaggtttaatgccttgtttcatcatcatagcaaacacagttttaccttctttcatctttccgt |
29105986 |
T |
|
| Q |
228 |
ccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattt |
327 |
Q |
| |
|
|||| ||||| |||||||||| ||||||||| || ||||||||||| |||||||||||| | |||||||||| |||| | |||||||||| |||| ||| |
|
|
| T |
29105985 |
ccttacaaaatccatcaaccaatatattaaaagtatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagttt |
29105886 |
T |
|
| Q |
328 |
agaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagg |
378 |
Q |
| |
|
| |||| || ||| ||||||||||||||| ||||||| | ||||||||| |
|
|
| T |
29105885 |
accaacaatgaaaaacccactaattaaagcactgtaagtaacaacatcagg |
29105835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 128 - 328
Target Start/End: Complemental strand, 29889269 - 29889069
Alignment:
| Q |
128 |
caatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccat |
227 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| | || ||||| |||||||||||| ||||| ||||||||| ||||||||||||| || | |
|
|
| T |
29889269 |
caatatccatccattaaagagttataagtaacaacattaagtttgatgtctcgtttcatcatcatagctaacacatttttagcttctttcacccttcctt |
29889170 |
T |
|
| Q |
228 |
ccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattt |
327 |
Q |
| |
|
|||| ||||| |||||||||| ||| |||||||| ||||||| ||| |||||||||||| | |||||||||| || || |||||||||| |||| ||| |
|
|
| T |
29889169 |
ccttacaaaatccatcaaccattatgttaaaggtatacacattcggattgatgttttccaatatcattttattaaaacaatcaattgcatctttcatttt |
29889070 |
T |
|
| Q |
328 |
a |
328 |
Q |
| |
|
| |
|
|
| T |
29889069 |
a |
29889069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 131 - 374
Target Start/End: Complemental strand, 29903002 - 29902759
Alignment:
| Q |
131 |
tatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatcct |
230 |
Q |
| |
|
|||||||||||||||||||||||||||||||| | ||| || ||| | | |||||||||||| ||||| ||||||||| ||||||||||||| || |||| |
|
|
| T |
29903002 |
tatccatccattaaagagttataagtaacaacgtcaggtttgatgccttgtttcatcatcatagctaacacatttttagcttctttcacccttccttcct |
29902903 |
T |
|
| Q |
231 |
tgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaatttaga |
330 |
Q |
| |
|
| |||||||||||||||| |||| |||| || ||||||| |||||||||||||| | |||||||||| || ||| |||||||||| ||| |||| |
|
|
| T |
29902902 |
tacaaaaaccatcaaccaatatagtaaaagtatacacatttgggttgatgttttcgaatatcattttattaaagaaatcaattgcatctctcagtttacc |
29902803 |
T |
|
| Q |
331 |
aacagtgggaaaaccactaattaaagcattgtaagtgaaaacat |
374 |
Q |
| |
|
|||| || ||| ||||||||||||||| | ||||||| ||||| |
|
|
| T |
29902802 |
aacaatgcaaaatccactaattaaagcactataagtgacaacat |
29902759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 128 - 375
Target Start/End: Complemental strand, 29116010 - 29115763
Alignment:
| Q |
128 |
caatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccat |
227 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||| || ||| | | |||||||||||| | || ||| ||||| ||||||||| | | || | |
|
|
| T |
29116010 |
caatatccatccattaaagagttataagtaacaaaattaggtttgatgccttgtttcatcatcatatcaaacacagttttaccttctttcatctttccgt |
29115911 |
T |
|
| Q |
228 |
ccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattt |
327 |
Q |
| |
|
|||| ||||| ||| ||||| ||||||||| || ||||||||||| |||||||||||| | |||||||||| |||| | ||||||||||||||| ||| |
|
|
| T |
29115910 |
ccttacaaaatgcattaaccaatatattaaaagtatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatcattcagttt |
29115811 |
T |
|
| Q |
328 |
agaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatc |
375 |
Q |
| |
|
| || | || ||||||||||||||||||| ||||||| | |||||| |
|
|
| T |
29115810 |
accaagaatgcaaaaaccactaattaaagcactgtaagtaacaacatc |
29115763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 128 - 366
Target Start/End: Complemental strand, 29894302 - 29894064
Alignment:
| Q |
128 |
caatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccat |
227 |
Q |
| |
|
||||||||||||||||||||| ||| |||||||||||||| || ||| | | |||||||||||| || || ||| ||||| ||||||||| | | || | |
|
|
| T |
29894302 |
caatatccatccattaaagagcaataggtaacaacattaggtttaatgccttgtttcatcatcatagcaaacacagttttaccttctttcatctttccgt |
29894203 |
T |
|
| Q |
228 |
ccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattt |
327 |
Q |
| |
|
|||| ||||| |||||||||| ||||||||| || ||||||||||| |||||||||||| | |||||||||| |||| | |||||||||| |||| || |
|
|
| T |
29894202 |
ccttacaaaatccatcaaccaatatattaaaagtatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagttg |
29894103 |
T |
|
| Q |
328 |
agaaacagtgggaaaaccactaattaaagcattgtaagt |
366 |
Q |
| |
|
| ||||||| ||| ||||||||||||||| ||||||| |
|
|
| T |
29894102 |
accaacagtgaaaaacccactaattaaagcactgtaagt |
29894064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 128 - 375
Target Start/End: Complemental strand, 29099092 - 29098845
Alignment:
| Q |
128 |
caatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccat |
227 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||| || ||| | | |||||||||||| | || ||| ||||| ||||||||| | | || | |
|
|
| T |
29099092 |
caatatccatccattaaagagttataagtaacaaaattaggtttgatgccttgtttcatcatcatatcaaacacagttttaccttctttcatctttccgt |
29098993 |
T |
|
| Q |
228 |
ccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattt |
327 |
Q |
| |
|
|||| ||||| ||| ||||| ||||||||| || ||||||||||| |||||||||||| | |||||||||| |||| | |||||||||| |||| ||| |
|
|
| T |
29098992 |
ccttacaaaatgcattaaccaatatattaaaagtatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagttt |
29098893 |
T |
|
| Q |
328 |
agaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatc |
375 |
Q |
| |
|
| || | || ||||||||||||||||||| ||||||| | |||||| |
|
|
| T |
29098892 |
accaagaatgcaaaaaccactaattaaagcactgtaagtaacaacatc |
29098845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 129 - 328
Target Start/End: Original strand, 29358230 - 29358429
Alignment:
| Q |
129 |
aatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatc |
228 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||| || ||| | | | |||||||||| ||||| ||||||||| ||||||||||||| || || |
|
|
| T |
29358230 |
aatatccatccattaaagagttataagtaacaacgccaggtttaatgccttgtatcatcatcatagctaacacatttttagcttctttcacccttccttc |
29358329 |
T |
|
| Q |
229 |
cttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattta |
328 |
Q |
| |
|
||| ||||| |||||||| | |||| ||||||| |||||||||||||||||||||||| | |||||||||| |||| | ||| |||||| |||| |||| |
|
|
| T |
29358330 |
cttacaaaatccatcaactaatatagtaaaggtatacacatccgggttgatgttttccaatatcattttattaaacagatcaactgcatctttcagttta |
29358429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 128 - 375
Target Start/End: Original strand, 29366671 - 29366918
Alignment:
| Q |
128 |
caatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccat |
227 |
Q |
| |
|
||||||| ||||||||||||||||||||||| ||| | ||| || ||| | | |||||||||||| |||| ||||||||| ||||||||| ||| | | |
|
|
| T |
29366671 |
caatatctatccattaaagagttataagtaaaaacgtcaggtttaatgccttgtttcatcatcatagctagcacatttttagcttctttcaaccttcttt |
29366770 |
T |
|
| Q |
228 |
ccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattt |
327 |
Q |
| |
|
|||| ||||| |||||||||| ||| ||||| || ||||||| |||||||||||||| | |||||||||| |||||| || ||||||| |||| ||| |
|
|
| T |
29366771 |
ccttacaaaatccatcaaccaatatgttaaaagtatacacatttgggttgatgttttcgaatatcattttattaaacaaatcagttgcatctttcatttt |
29366870 |
T |
|
| Q |
328 |
agaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatc |
375 |
Q |
| |
|
| ||| || ||| ||||||||||||||||||||||| | |||||| |
|
|
| T |
29366871 |
accgacaatgcaaaagccactaattaaagcattgtaagtaacaacatc |
29366918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 128 - 366
Target Start/End: Complemental strand, 29084767 - 29084529
Alignment:
| Q |
128 |
caatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccat |
227 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||| | ||| | | |||||||||||| || || ||| ||||| ||||||||| | | | | |
|
|
| T |
29084767 |
caatatccatccattaaagagttataagtaacaacatcaggtatgatgccttgtttcatcatcatagcaaacacagttttaccttctttcatctttctgt |
29084668 |
T |
|
| Q |
228 |
ccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattt |
327 |
Q |
| |
|
|||| ||||| |||||||||| ||||||||| || ||| ||||||| |||||||||||| | | |||||||| |||| | |||||||||| |||| ||| |
|
|
| T |
29084667 |
ccttacaaaatccatcaaccaatatattaaaagtatacccatccggtttgatgttttccaatattattttattaaacagatcaattgcatctttcagttt |
29084568 |
T |
|
| Q |
328 |
agaaacagtgggaaaaccactaattaaagcattgtaagt |
366 |
Q |
| |
|
| |||| | ||| ||||||||||||||| ||||||| |
|
|
| T |
29084567 |
accaacaacgaaaaacccactaattaaagcactgtaagt |
29084529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 272 - 402
Target Start/End: Complemental strand, 24711743 - 24711613
Alignment:
| Q |
272 |
gggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaa |
371 |
Q |
| |
|
||||||||||| || |||||||||||||||||||| | ||||||||||||||||||| |||| || || |||||||||||||||| | ||||||| || |
|
|
| T |
24711743 |
gggttgatgttgtctgctgtcattttattgaacaaccaaattgcatcattcaatttaccaacaatgcaaacaccactaattaaagcactataagtgacaa |
24711644 |
T |
|
| Q |
372 |
catcagggccaattctcttagcaaccatttc |
402 |
Q |
| |
|
||||||||| ||||||||||||| ||||||| |
|
|
| T |
24711643 |
catcagggcaaattctcttagcagccatttc |
24711613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 29876701 - 29876544
Alignment:
| Q |
1 |
ttcatccaccattttaatcttacaaaatccattaatcatggtagtatagctctgaacattagccatgactcccctcgcggccatactatcgaatatttcc |
100 |
Q |
| |
|
|||||||| |||||||| |||||||||||||||||||||| || | |||||| ||||||| || | ||||||||| ||||| | | |||||| | | |
|
|
| T |
29876701 |
ttcatccatcattttaaccttacaaaatccattaatcatgatactgtagctccgaacatttgcagtcactcccctctgaaccatagtgttgaatatattc |
29876602 |
T |
|
| Q |
101 |
ttggccttgttcacttcgttaatcaaacaatatccatccattaaagagttataagtaa |
158 |
Q |
| |
|
|| ||||||| |||||| |||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
29876601 |
ttagccttgtccacttctttaaccagacaatatccatccattaaagagttataagtaa |
29876544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 278 - 401
Target Start/End: Complemental strand, 29905252 - 29905129
Alignment:
| Q |
278 |
atgttttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcag |
377 |
Q |
| |
|
||||||||| ||||||||||||||| |||||||||||||| ||||||||| |||| || ||| |||||||||||||||||||||||| || ||||| |
|
|
| T |
29905252 |
atgttttccaatgtcattttattgaaaaaaccaattgcatctttcaatttaccaacaatgcaaaagtcactaattaaagcattgtaagtgagaatatcag |
29905153 |
T |
|
| Q |
378 |
ggccaattctcttagcaaccattt |
401 |
Q |
| |
|
|| ||||||||||| |||||||| |
|
|
| T |
29905152 |
gggaaattctcttagaaaccattt |
29905129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 233 - 366
Target Start/End: Original strand, 29211433 - 29211566
Alignment:
| Q |
233 |
caaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaa |
332 |
Q |
| |
|
|||||| ||||||||| ||||||||| || ||||||||||| ||||||||||||| | |||||||||| |||| | ||| |||||| |||| |||| || |
|
|
| T |
29211433 |
caaaaaacatcaaccaatatattaaaagtatacacatccggtttgatgttttccgatatcattttattaaacagatcaactgcatctttcagtttaccaa |
29211532 |
T |
|
| Q |
333 |
cagtgggaaaaccactaattaaagcattgtaagt |
366 |
Q |
| |
|
||||| ||| ||||||||||||||| ||||||| |
|
|
| T |
29211533 |
cagtgaaaaacccactaattaaagcactgtaagt |
29211566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 240 - 366
Target Start/End: Original strand, 28927344 - 28927470
Alignment:
| Q |
240 |
catcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagtggg |
339 |
Q |
| |
|
|||||| || |||||||||||| |||| || |||||||| ||||| | | ||||||||| ||||||||||||| ||||||||||||| || | || |
|
|
| T |
28927344 |
catcaatcaatatattaaaggtatacatatttgggttgatcttttctgatatcattttatgaaacaaaccaattgaatcattcaatttaccaagaatgca |
28927443 |
T |
|
| Q |
340 |
aaaaccactaattaaagcattgtaagt |
366 |
Q |
| |
|
||||||||||||||||||| ||||||| |
|
|
| T |
28927444 |
aaaaccactaattaaagcactgtaagt |
28927470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 180 - 326
Target Start/End: Complemental strand, 25450605 - 25450459
Alignment:
| Q |
180 |
ctttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgat |
279 |
Q |
| |
|
|||||||||||| |||||| || |||| | ||||||||| | || ||||| ||||| |||||||||| |||||| ||||| |||||| |||||||| |
|
|
| T |
25450605 |
ctttcatcatcacggctaacactactttagcatctttcacctttccttccttacaaaatccatcaaccaatatattgaaggtatacacagttgggttgat |
25450506 |
T |
|
| Q |
280 |
gttttccgctgtcattttattgaacaaaccaattgcatcattcaatt |
326 |
Q |
| |
|
|||||||| | |||| | || ||||||| ||||||||| ||||||| |
|
|
| T |
25450505 |
gttttccgataccattatcttaaacaaactaattgcatctttcaatt |
25450459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 29946313 - 29946263
Alignment:
| Q |
1 |
ttcatccaccattttaatcttacaaaatccattaatcatggtagtatagct |
51 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
29946313 |
ttcatccaccattttaatcttacaaaatccattaatcatgataatatagct |
29946263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 168
Target Start/End: Complemental strand, 24884915 - 24884849
Alignment:
| Q |
102 |
tggccttgttcacttcgttaatcaaacaatatccatccattaaagagttataagtaacaacattagg |
168 |
Q |
| |
|
|||||||||||||||| |||| ||| |||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
24884915 |
tggccttgttcacttctttaaccaagaaataaccatccattaaagaagtataagtaacaacattagg |
24884849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 10 - 168
Target Start/End: Original strand, 28926679 - 28926837
Alignment:
| Q |
10 |
cattttaatcttacaaaatccattaatcatggtagtatagctctgaacattagccatgactcccctcgcggccatactatcgaatatttccttggccttg |
109 |
Q |
| |
|
|||||||||||||||||| |||||||||| | || | || ||||||| || || | ||||||| | |||||| | | |||||| ||| |||||| |
|
|
| T |
28926679 |
cattttaatcttacaaaacccattaatcaagatattgtaactctgaatatcaggattcactcccccctgagccatattgttgaatatactcttagccttg |
28926778 |
T |
|
| Q |
110 |
ttcacttcgttaatcaaacaatatccatccattaaagagttataagtaacaacattagg |
168 |
Q |
| |
|
|||||||| |||| | ||||||||||||||||||||| ||||||||||||| ||||| |
|
|
| T |
28926779 |
ttcacttctttaacaaggcaatatccatccattaaagagctataagtaacaacgttagg |
28926837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 21160748 - 21160809
Alignment:
| Q |
1 |
ttcatccaccattttaatcttacaaaatccattaatcatggtagtatagctctgaacattag |
62 |
Q |
| |
|
|||||||||||||||| ||||||| | ||||||||||||| ||||||||| |||||||||| |
|
|
| T |
21160748 |
ttcatccaccattttattcttacatagtccattaatcatgacagtatagctatgaacattag |
21160809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 29905412 - 29905355
Alignment:
| Q |
104 |
gccttgttcacttcgttaatcaaacaatatccatccattaaagagttataagtaacaa |
161 |
Q |
| |
|
||||| |||||||| |||| || |||||||||||||||||||||||||||||||||| |
|
|
| T |
29905412 |
gccttattcacttctttaagtaagcaatatccatccattaaagagttataagtaacaa |
29905355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 30053303 - 30053242
Alignment:
| Q |
1 |
ttcatccaccattttaatcttacaaaatccattaatcatggtagtatagctctgaacattag |
62 |
Q |
| |
|
|||||||||||||||| ||||||| ||||||||||||||| | | ||||| |||||||||| |
|
|
| T |
30053303 |
ttcatccaccattttattcttacataatccattaatcatgacaatgtagctatgaacattag |
30053242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 25450994 - 25450827
Alignment:
| Q |
1 |
ttcatccaccattttaatcttacaaaatccattaatcatggtagtatagctctgaacattagccatgactcccctcgcggccatactatcgaatatttcc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| | |||||||| |||| ||||| |||| | | | |||||||| | |||||| | ||||||| | |
|
|
| T |
25450994 |
ttcatccaccattttaatcttacaaaatttactaatcatgatagtgtagctaagaacgtcaaaagtcactcccctttgagtcatacttttgaatattctc |
25450895 |
T |
|
| Q |
101 |
ttggccttgttcacttcgttaatcaaacaatatccatccattaaagagttataagtaacaacattagg |
168 |
Q |
| |
|
||||||| ||||||||| |||| | ||||||||||| || |||| || ||||||| | ||||||||| |
|
|
| T |
25450894 |
ttggcctcgttcacttcattaactagacaatatccatacaataaacagctataagtgataacattagg |
25450827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 30154376 - 30154337
Alignment:
| Q |
1 |
ttcatccaccattttaatcttacaaaatccattaatcatg |
40 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
30154376 |
ttcatccaccattttaaccttacataatccattaatcatg |
30154337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 15715109 - 15715167
Alignment:
| Q |
1 |
ttcatccaccattttaatcttacaaaatccattaatcatggtagtatagctctgaacat |
59 |
Q |
| |
|
|||||| ||||||||||||||||| || |||||||| ||| |||| ||||| ||||||| |
|
|
| T |
15715109 |
ttcatcaaccattttaatcttacataagccattaataatgatagtgtagctgtgaacat |
15715167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 24739318 - 24739376
Alignment:
| Q |
1 |
ttcatccaccattttaatcttacaaaatccattaatcatggtagtatagctctgaacat |
59 |
Q |
| |
|
|||||||||||||||| ||||||| | ||||||||||||| | ||||||| ||||||| |
|
|
| T |
24739318 |
ttcatccaccattttagtcttacatagtccattaatcatgacactatagctatgaacat |
24739376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 30154275 - 30154213
Alignment:
| Q |
102 |
tggccttgttcacttcgttaatcaaacaatatccatccattaaagagttataagtaacaacat |
164 |
Q |
| |
|
||||||| |||||||| |||| ||| |||| |||||||| ||||| |||||||||||||||| |
|
|
| T |
30154275 |
tggccttattcacttctttaaccaagaaatacccatccatcaaagaattataagtaacaacat |
30154213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 24886640 - 24886701
Alignment:
| Q |
1 |
ttcatccaccattttaatcttacaaaatccattaatcatggtagtatagctctgaacattag |
62 |
Q |
| |
|
|||||| | |||||||| ||| |||||||||||||||| | |||| ||||| |||||||||| |
|
|
| T |
24886640 |
ttcatctatcattttaaccttgcaaaatccattaatcaagatagtgtagctatgaacattag |
24886701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 29358102 - 29358139
Alignment:
| Q |
1 |
ttcatccaccattttaatcttacaaaatccattaatca |
38 |
Q |
| |
|
|||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
29358102 |
ttcatccatcattttaatcttacaaaacccattaatca |
29358139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 29950120 - 29950180
Alignment:
| Q |
101 |
ttggccttgttcacttcgttaatcaaacaatatccatccattaaagagttataagtaacaa |
161 |
Q |
| |
|
||||||||||| ||||| |||| ||| |||| |||||||||||||| |||||||||||| |
|
|
| T |
29950120 |
ttggccttgttgacttctttaaccaagaaataaccatccattaaagaactataagtaacaa |
29950180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 30127178 - 30127234
Alignment:
| Q |
1 |
ttcatccaccattttaatcttacaaaatccattaatcatggtagtatagctctgaac |
57 |
Q |
| |
|
|||| ||||| |||||||||||||||| |||||||||||| || | ||||| ||||| |
|
|
| T |
30127178 |
ttcacccacccttttaatcttacaaaacccattaatcatgatattgtagctttgaac |
30127234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 30149303 - 30149243
Alignment:
| Q |
101 |
ttggccttgttcacttcgttaatcaaacaatatccatccattaaagagttataagtaacaa |
161 |
Q |
| |
|
||||||||||| ||||| |||| ||| |||| |||||||||||||| |||||||||||| |
|
|
| T |
30149303 |
ttggccttgttgacttctttaaccaagaaataaccatccattaaagaactataagtaacaa |
30149243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 311
Target Start/End: Complemental strand, 30154150 - 30154066
Alignment:
| Q |
227 |
tccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaa |
311 |
Q |
| |
|
||||| || ||||||||||||| |||||| ||||| ||||||| |||||| |||||| | |||||| |||||||||||||| |
|
|
| T |
30154150 |
tccttacataaaccatcaaccaatatattgaaggtatacacattggggttggtgtttttgagtatcatttcattgaacaaaccaa |
30154066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0237 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0237
Description:
Target: scaffold0237; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 402
Target Start/End: Complemental strand, 22219 - 21818
Alignment:
| Q |
1 |
ttcatccaccattttaatcttacaaaatccattaatcatggtagtatagctctgaacattagccatgactcccctcgcggccatactatcgaatatttcc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||| | || ||||| | |||| | | |||||| | |
|
|
| T |
22219 |
ttcatccaccattttaatcttacaaaatccattaatcatgatattgtagctctgaacattagcagtcacacccctatgagacatagtgttgaatatactc |
22120 |
T |
|
| Q |
101 |
ttggccttgttcacttcgttaatcaaacaatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaata |
200 |
Q |
| |
|
| ||||||||||||||| || | || |||||||||||||||||||||| | ||||||||||||| ||| || ||| | |||||||||||| ||||| | |
|
|
| T |
22119 |
tcggccttgttcacttcatttaccagacaatatccatccattaaagagctgtaagtaacaacatcaggtttaatgctttgtttcatcatcatagctaaca |
22020 |
T |
|
| Q |
201 |
catttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttatt |
300 |
Q |
| |
|
|||||||| | ||||| | | || ||||| ||||| |||||||||| |||| ||||||| |||||||| ||| ||||||||| || |||||||||||| |
|
|
| T |
22019 |
catttttagcctcttttatgtttccgtccttacaaaatccatcaaccaatatactaaaggtatacacatctgggatgatgtttttcgatgtcattttatt |
21920 |
T |
|
| Q |
301 |
gaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggccaattctcttagcaaccatt |
400 |
Q |
| |
|
||| ||| |||||||||| ||||||||| |||| || ||| |||||||||||||||||||||||||||||||| ||| ||||||||||| |||| || |
|
|
| T |
21919 |
gaataaatcaattgcatctttcaatttaccaacaatgcaaaagccactaattaaagcattgtaagtgaaaacatcggggaaaattctcttagaaaccttt |
21820 |
T |
|
| Q |
401 |
tc |
402 |
Q |
| |
|
|| |
|
|
| T |
21819 |
tc |
21818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 402
Target Start/End: Original strand, 15062999 - 15063400
Alignment:
| Q |
1 |
ttcatccaccattttaatcttacaaaatccattaatcatggtagtatagctctgaacattagccatgactcccctcgcggccatactatcgaatatttcc |
100 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||| || | |||||| ||| | || | |||||||| |||||| | ||||| | |
|
|
| T |
15062999 |
ttcatctaccattttaatcttacaaaatccattaatcatgatactgtagctccaaacgtcaggagttactcccctttgagccataacgttgaataaactc |
15063098 |
T |
|
| Q |
101 |
ttggccttgttcacttcgttaatcaaacaatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaata |
200 |
Q |
| |
|
|||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||| | | |||| || | ||||||||||| ||||| | |
|
|
| T |
15063099 |
ttggccttgttcacttgtttaactaagcaatatccatccattaaagagttataagtaacaacatcaagttttacgttttttttcatcatcacagctaaca |
15063198 |
T |
|
| Q |
201 |
catttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttatt |
300 |
Q |
| |
|
|||||||| ||||| ||||| | || ||||| ||||||||||||| || |||| |||| || ||||||| ||| || ||||| |||| | ||||| |||| |
|
|
| T |
15063199 |
catttttagcttctctcacctttccttccttacaaaaaccatcaatcaatatactaaaagtatacacattcggattaatgttgtccgatatcattctatt |
15063298 |
T |
|
| Q |
301 |
gaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggccaattctcttagcaaccatt |
400 |
Q |
| |
|
|||||| ||| |||| ||||||||| |||| | ||| ||||||||||||| | | ||||||| |||||||| |||||| |||| ||||||| |
|
|
| T |
15063299 |
aaacaaatcaacagcatatttcaatttaccaacaacgcaaaagccactaattaaagaactataagtgactacatcaggagaaattcttttagaaaccatt |
15063398 |
T |
|
| Q |
401 |
tc |
402 |
Q |
| |
|
|| |
|
|
| T |
15063399 |
tc |
15063400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 80; Significance: 2e-37; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 103 - 402
Target Start/End: Original strand, 24219460 - 24219759
Alignment:
| Q |
103 |
ggccttgttcacttcgttaatcaaacaatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaataca |
202 |
Q |
| |
|
|||||||||||| || || | || ||||||||||| ||||||||||||||||||||||| ||||| |||| || | ||||||||||| | || ||| |
|
|
| T |
24219460 |
ggccttgttcacctcatttaccagacaatatccattcattaaagagttataagtaacaatgttaggttttacatcttttttcatcatcacaacaaacaca |
24219559 |
T |
|
| Q |
203 |
tttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattga |
302 |
Q |
| |
|
|||||| |||||||||| | || ||||| ||||| ||||||||| |||| ||||||| |||||| ||||||||||||||| | ||||||||| | |
|
|
| T |
24219560 |
tttttagcttctttcacttttccttccttacaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgta |
24219659 |
T |
|
| Q |
303 |
acaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggccaattctcttagcaaccatttc |
402 |
Q |
| |
|
|||||||||||||||| ||||||| | | | || ||||||| |||||||| ||| ||||||| |||| ||| | ||||||||||||||||||||| |
|
|
| T |
24219660 |
acaaaccaattgcatctttcaattgacccataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttc |
24219759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 11991188 - 11991127
Alignment:
| Q |
1 |
ttcatccaccattttaatcttacaaaatccattaatcatggtagtatagctctgaacattag |
62 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| ||| |||||| ||| |||||| |
|
|
| T |
11991188 |
ttcatcaaccattttaatcttacaaaatccattaatcatagtacaatagctatgagcattag |
11991127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 24219358 - 24219397
Alignment:
| Q |
1 |
ttcatccaccattttaatcttacaaaatccattaatcatg |
40 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
24219358 |
ttcatccaccattttaatcttacaaaatccactaatcatg |
24219397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 16350919 - 16350876
Alignment:
| Q |
8 |
accattttaatcttacaaaatccattaatcatggtagtatagct |
51 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| || ||||||| |
|
|
| T |
16350919 |
accattttaatcttacagaatccattaatcatgatattatagct |
16350876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 24226596 - 24226529
Alignment:
| Q |
101 |
ttggccttgttcacttcgttaatcaaacaatatccatccattaaagagttataagtaacaacattagg |
168 |
Q |
| |
|
||||||||||| ||||| |||| ||| |||| |||||||| ||||| ||||||||||||| |||||| |
|
|
| T |
24226596 |
ttggccttgttgacttctttaaccaagaaatacccatccatcaaagaattataagtaacaatattagg |
24226529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 24226696 - 24226657
Alignment:
| Q |
1 |
ttcatccaccattttaatcttacaaaatccattaatcatg |
40 |
Q |
| |
|
|||||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
24226696 |
ttcatccaccattttattcttacataatccattaatcatg |
24226657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 284
Target Start/End: Complemental strand, 16350748 - 16350643
Alignment:
| Q |
179 |
tctttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttga |
278 |
Q |
| |
|
||||||||||||| |||| ||||||||| ||||||| | | | || ||||| |||| | ||||||||| ||||||||| || || |||| ||||||| |
|
|
| T |
16350748 |
tctttcatcatcacagctatcacatttttagcttctttgatctttccttccttacaaagagcatcaaccaatatattaaaagtataagcatctgggttga |
16350649 |
T |
|
| Q |
279 |
tgtttt |
284 |
Q |
| |
|
|||||| |
|
|
| T |
16350648 |
tgtttt |
16350643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054 (Bit Score: 74; Significance: 8e-34; HSPs: 2)
Name: scaffold0054
Description:
Target: scaffold0054; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 161 - 402
Target Start/End: Original strand, 53984 - 54225
Alignment:
| Q |
161 |
acattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaagg |
260 |
Q |
| |
|
|||||||| || ||||| | | |||||||||| |||| ||||||||| ||| ||||| ||| || ||||| ||||| |||||||| | ||||||||||| |
|
|
| T |
53984 |
acattaggtttaatgtcttgtatcatcatcatatctaacacatttttagcttttttcagccttccttccttacaaaatccatcaactaatatattaaagg |
54083 |
T |
|
| Q |
261 |
tgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcatt |
360 |
Q |
| |
|
| ||||||||||| |||||||||||| | |||||||||| |||| | |||||||||| |||| |||| |||| || ||| || |||||||||||| | |
|
|
| T |
54084 |
tatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaaccctctaattaaagcact |
54183 |
T |
|
| Q |
361 |
gtaagtgaaaacatcagggccaattctcttagcaaccatttc |
402 |
Q |
| |
|
|||||| | |||||| || ||||||||| ||||||||||| |
|
|
| T |
54184 |
gtaagtaacaacatcgggagaaattctctttgcaaccatttc |
54225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 4 - 258
Target Start/End: Original strand, 53722 - 53976
Alignment:
| Q |
4 |
atccaccattttaatcttacaaaatccattaatcatggtagtatagctctgaacattagccatgactcccctcgcggccatactatcgaatatttccttg |
103 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| || | ||||| ||||||||||| | ||||||||| | |||| | | |||||| | ||| |
|
|
| T |
53722 |
atccacctttttaatcttacaaaatccattaatcatgatattgtagctatgaacattagcagtcactcccctctgagacatagtgttgaatatcttctta |
53821 |
T |
|
| Q |
104 |
gccttgttcacttcgttaatcaaacaatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacat |
203 |
Q |
| |
|
||||| ||||||| |||| | ||||||||||||||||||||| |||||||||||||||||| || ||| | | |||||||||||| || || ||| |
|
|
| T |
53822 |
gccttattcacttgtttaactaggcaatatccatccattaaagagcaataagtaacaacattaggtttaatgccttgtttcatcatcatagcaaacacag |
53921 |
T |
|
| Q |
204 |
ttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaa |
258 |
Q |
| |
|
||||| ||||||||| | | | ||||| ||||| |||||||||| | ||||||| |
|
|
| T |
53922 |
ttttaccttctttcatctttctgtccttacaaaatccatcaaccaatgtattaaa |
53976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 402
Target Start/End: Complemental strand, 10130013 - 10129612
Alignment:
| Q |
1 |
ttcatccaccattttaatcttacaaaatccattaatcatggtagtatagctctgaacattagccatgactcccctcgcggccatactatcgaatatttcc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || | || || ||||||| || || |||||||| |||||| | | || ||| || |
|
|
| T |
10130013 |
ttcatccaccattttaatcttacaaaatccattaatcatgatactgtaactttgaacatcggcaatcactcccctttgggccatggtgttgagtataacc |
10129914 |
T |
|
| Q |
101 |
ttggccttgttcacttcgttaatcaaacaatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaata |
200 |
Q |
| |
|
| ||||||||||||| |||| | |||||||||||| |||||||| |||||||||||||| ||||| |||| | ||| |||||||| | ||| | | |
|
|
| T |
10129913 |
tcagccttgttcacttgtttaacaagacaatatccatctattaaagaattataagtaacaacgttaggttttacgccgtttttcatcaaaacggcaacca |
10129814 |
T |
|
| Q |
201 |
catttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttatt |
300 |
Q |
| |
|
| |||| |||||||| | |||||||| |||||| ||||||||| |||| | | ||| || |||| ||||| ||||||||| | ||||||||| |
|
|
| T |
10129813 |
ctgctttagcttctttcggttttccatccttacaaaaagcatcaaccaatatactcatggtataaacatttgggttaatgttttccaatatcattttatg |
10129714 |
T |
|
| Q |
301 |
gaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggccaattctcttagcaaccatt |
400 |
Q |
| |
|
||||||||||||||||| ||||||| | ||| | ||| |||||||||||| ||| ||||||| ||||||||| |||||||||||| | |||| |
|
|
| T |
10129713 |
caacaaaccaattgcatctttcaattgacccacaacgcaaaagccactaattaaattattataagtgacaacatcaggaaaaattctcttagcgatcatt |
10129614 |
T |
|
| Q |
401 |
tc |
402 |
Q |
| |
|
|| |
|
|
| T |
10129613 |
tc |
10129612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 19490126 - 19490071
Alignment:
| Q |
1 |
ttcatccaccattttaatcttacaaaatccattaatcatggtagtatagctctgaa |
56 |
Q |
| |
|
|||||||| |||||| |||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
19490126 |
ttcatccaacattttcatcttacataatccattaatcatgatagtatagctctgaa |
19490071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15591282 - 15591240
Alignment:
| Q |
1 |
ttcatccaccattttaatcttacaaaatccattaatcatggta |
43 |
Q |
| |
|
||||||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
15591282 |
ttcatccactattttaatcttacataatccattaatcatggta |
15591240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 41316135 - 41316091
Alignment:
| Q |
11 |
attttaatcttacaaaatccattaatcatggtagtatagctctga |
55 |
Q |
| |
|
|||||||||||||| ||||| ||||||||| || ||||||||||| |
|
|
| T |
41316135 |
attttaatcttacagaatccgttaatcatgatattatagctctga |
41316091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: scaffold0051
Description:
Target: scaffold0051; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 43415 - 43462
Alignment:
| Q |
8 |
accattttaatcttacaaaatccattaatcatggtagtatagctctga |
55 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
43415 |
accattttaatcttacaaaatccattaatcatgatattatagctctga |
43462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 284
Target Start/End: Original strand, 43590 - 43693
Alignment:
| Q |
181 |
tttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatg |
280 |
Q |
| |
|
|||||||||||||||||| | ||| ||| || ||||||| | || ||||| |||| | ||||||||| ||||||||| || ||||||| ||||||||| |
|
|
| T |
43590 |
tttcatcatcatggctaacagattcttagctcctttcacatttccttccttacaaagagcatcaaccaatatattaaaagtatacacatttgggttgatg |
43689 |
T |
|
| Q |
281 |
tttt |
284 |
Q |
| |
|
|||| |
|
|
| T |
43690 |
tttt |
43693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 48033 - 48076
Alignment:
| Q |
8 |
accattttaatcttacaaaatccattaatcatggtagtatagct |
51 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| || ||||||| |
|
|
| T |
48033 |
accattttaatcttacagaatccattaatcatgatactatagct |
48076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0573 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0573
Description:
Target: scaffold0573; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 10 - 168
Target Start/End: Complemental strand, 4004 - 3846
Alignment:
| Q |
10 |
cattttaatcttacaaaatccattaatcatggtagtatagctctgaacattagccatgactcccctcgcggccatactatcgaatatttccttggccttg |
109 |
Q |
| |
|
|||||||||||||||||| |||||||||| | || | || ||||||| || || | ||||||| | |||||| | | |||||| ||| |||||| |
|
|
| T |
4004 |
cattttaatcttacaaaacccattaatcaagatattgtaactctgaatatcaggattcactcccccctgagccatattgttgaatatactcttagccttg |
3905 |
T |
|
| Q |
110 |
ttcacttcgttaatcaaacaatatccatccattaaagagttataagtaacaacattagg |
168 |
Q |
| |
|
|||||||| |||| | ||||||||||||||||||||| ||||||||||||| ||||| |
|
|
| T |
3904 |
ttcacttctttaacaaggcaatatccatccattaaagagctataagtaacaacgttagg |
3846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0654 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0654
Description:
Target: scaffold0654; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 284
Target Start/End: Original strand, 1521 - 1626
Alignment:
| Q |
179 |
tctttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttga |
278 |
Q |
| |
|
|||||||||||||| |||| ||||||||| |||||||| | || ||||| |||||| |||| |||| ||||||||| || |||||||| ||||||| |
|
|
| T |
1521 |
tctttcatcatcatagctatcacatttttagcttctttcgtgtttccttccttacaaaaagcatcgaccaatatattaaaagtatacacatcagggttga |
1620 |
T |
|
| Q |
279 |
tgtttt |
284 |
Q |
| |
|
|||||| |
|
|
| T |
1621 |
tgtttt |
1626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 37; Significance: 0.00000000001; HSPs: 4)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 140174 - 140126
Alignment:
| Q |
1 |
ttcatccaccattttaatcttacaaaatccattaatcatggtagtatag |
49 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||| || ||||| |
|
|
| T |
140174 |
ttcatcaaccattttaatcttacaaaatccattaatcatgatactatag |
140126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 137243 - 137196
Alignment:
| Q |
8 |
accattttaatcttacaaaatccattaatcatggtagtatagctctga |
55 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| || ||||||||||| |
|
|
| T |
137243 |
accattttaatcttacagaatccattaatcatgatattatagctctga |
137196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 121594 - 121655
Alignment:
| Q |
1 |
ttcatccaccattttaatcttacaaaatccattaatcatggtagtatagctctgaacattag |
62 |
Q |
| |
|
|||||| ||||||||||||||||| || |||||||| ||| |||| ||||| |||||||||| |
|
|
| T |
121594 |
ttcatcaaccattttaatcttacataaaccattaataatgatagtgtagctgtgaacattag |
121655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 284
Target Start/End: Original strand, 105087 - 105144
Alignment:
| Q |
227 |
tccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgtttt |
284 |
Q |
| |
|
||||| |||| | ||||||||| ||||||||| || |||||||| ||||||||||||| |
|
|
| T |
105087 |
tccttacaaagagcatcaaccaatatattaaaagtatacacatctgggttgatgtttt |
105144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0429 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0429
Description:
Target: scaffold0429; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 284
Target Start/End: Complemental strand, 5972 - 5789
Alignment:
| Q |
101 |
ttggccttgttcacttcgttaatcaaacaatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaata |
200 |
Q |
| |
|
|||||||| |||||||| |||| | |||||||||||||||| || | || ||||||||||| || ||| | ||||||||||||| |||||| | |
|
|
| T |
5972 |
ttggccttattcacttcattaactaggcaatatccatccattattgaactgtaggtaacaacattcggtattacaccttctttcatcatcacggctaaca |
5873 |
T |
|
| Q |
201 |
catttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgtttt |
284 |
Q |
| |
|
||| ||| || |||||| | || ||||| |||| | ||||||||| ||||||||| || ||||||| ||||||||||||| |
|
|
| T |
5872 |
gattcttagctcctttcagatttccttccttacaaagagcatcaaccaatatattaaaagtatacacatttgggttgatgtttt |
5789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0429; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 6063 - 6018
Alignment:
| Q |
10 |
cattttaatcttacaaaatccattaatcatggtagtatagctctga |
55 |
Q |
| |
|
||||||||||||||| || |||||||||||| || ||||||||||| |
|
|
| T |
6063 |
cattttaatcttacagaacccattaatcatgatattatagctctga |
6018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 13904720 - 13904778
Alignment:
| Q |
1 |
ttcatccaccattttaatcttacaaaatccattaatcatggtagtatagctctgaacat |
59 |
Q |
| |
|
|||||| ||||||||||||||||| || |||||||| ||| |||| ||||| ||||||| |
|
|
| T |
13904720 |
ttcatcaaccattttaatcttacataagccattaataatgatagtgtagctgtgaacat |
13904778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0308 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0308
Description:
Target: scaffold0308; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 318
Target Start/End: Complemental strand, 8691 - 8554
Alignment:
| Q |
181 |
tttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatg |
280 |
Q |
| |
|
||||| |||||| ||||| ||||||||| ||||||||| | || ||||| || | | ||||||||| ||||||||| || || |||| ||||||||| |
|
|
| T |
8691 |
tttcaccatcatagctaacacatttttagcttctttcatttttccttccttacagagagcatcaaccaatatattaaaagtataaacatttgggttgatg |
8592 |
T |
|
| Q |
281 |
ttttccgctgtcattttattgaacaaaccaattgcatc |
318 |
Q |
| |
|
|||| | | ||||| ||||||||||| || |||||| |
|
|
| T |
8591 |
tttttcaataccatttcattgaacaaacgaaatgcatc |
8554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 284
Target Start/End: Original strand, 126424 - 126529
Alignment:
| Q |
179 |
tctttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttga |
278 |
Q |
| |
|
||||||||||||| |||| ||| ||||| ||||||||| | | || ||||| || | | ||||||||| ||||||||| || || ||||| ||||||| |
|
|
| T |
126424 |
tctttcatcatcacagctatcacacttttagcttctttcatctttccttccttacatagagcatcaaccattatattaaaagtataaacatctgggttga |
126523 |
T |
|
| Q |
279 |
tgtttt |
284 |
Q |
| |
|
|||||| |
|
|
| T |
126524 |
tgtttt |
126529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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