View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1504_2D_low_33 (Length: 215)
Name: NF1504_2D_low_33
Description: NF1504_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1504_2D_low_33 |
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Alignment Details
Target: chr6 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 34354021 - 34354222
Alignment:
| Q |
1 |
attttctacaatttgggtatgaaattagtggtgaaagatacataagagttagatttttcatttggccattgtgatcttggatatagaacgattcttaagg |
100 |
Q |
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| T |
34354021 |
attttctacaatttgggtatgaaattagtggtgaaagatacacaagagttagatttttcatttggccattgtgatcttggatatagaacgattcttaagg |
34354120 |
T |
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| Q |
101 |
ggtaagtggtggattatcaagaggtggaagcaaaagataaaatcagtgtttttggttcattttaagaaaggctaaagcctcattttgaagtattttttat |
200 |
Q |
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|||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34354121 |
ggtatgtggtggattatcaagacgtggaagcaaaagataaaatcagtgtttttggttcattttaagaaaggctaaagcctcattttgaagtattttttat |
34354220 |
T |
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| Q |
201 |
tg |
202 |
Q |
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|| |
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| T |
34354221 |
tg |
34354222 |
T |
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