View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1504_2D_low_5 (Length: 655)

Name: NF1504_2D_low_5
Description: NF1504_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1504_2D_low_5
NF1504_2D_low_5
[»] chr4 (42 HSPs)
chr4 (40-339)||(45199368-45199668)
chr4 (387-655)||(45199053-45199320)
chr4 (468-583)||(35730933-35731048)
chr4 (470-577)||(37678122-37678229)
chr4 (468-582)||(8286930-8287044)
chr4 (470-584)||(50246132-50246246)
chr4 (481-565)||(47981921-47982005)
chr4 (502-582)||(48507723-48507803)
chr4 (481-582)||(54961429-54961530)
chr4 (481-565)||(13872354-13872438)
chr4 (469-565)||(19916929-19917025)
chr4 (481-577)||(47862155-47862251)
chr4 (481-577)||(47980688-47980784)
chr4 (481-582)||(8287218-8287319)
chr4 (481-577)||(12691409-12691505)
chr4 (481-565)||(19916671-19916755)
chr4 (481-565)||(22249748-22249832)
chr4 (481-582)||(12691690-12691791)
chr4 (521-582)||(35730660-35730721)
chr4 (481-582)||(53559672-53559773)
chr4 (481-565)||(22250018-22250102)
chr4 (481-577)||(37677851-37677947)
chr4 (481-581)||(50245856-50245956)
chr4 (481-540)||(20086477-20086536)
chr4 (481-576)||(34238474-34238569)
chr4 (514-577)||(37678044-37678107)
chr4 (514-565)||(48507539-48507590)
chr4 (468-570)||(20600957-20601059)
chr4 (505-565)||(13872084-13872144)
chr4 (470-562)||(27813067-27813159)
chr4 (469-577)||(32846365-32846473)
chr4 (481-561)||(33294428-33294508)
chr4 (514-577)||(8287057-8287120)
chr4 (514-577)||(19740863-19740926)
chr4 (278-337)||(21121943-21122002)
chr4 (514-577)||(26601272-26601335)
chr4 (522-577)||(27813181-27813236)
chr4 (514-577)||(47862277-47862340)
chr4 (502-565)||(54961737-54961800)
chr4 (481-562)||(33294162-33294243)
chr4 (504-577)||(37732300-37732373)
chr4 (514-570)||(53559512-53559568)
[»] chr3 (34 HSPs)
chr3 (468-577)||(30803849-30803958)
chr3 (481-581)||(21300418-21300518)
chr3 (481-577)||(33458203-33458299)
chr3 (481-565)||(1741402-1741486)
chr3 (481-565)||(30804133-30804217)
chr3 (470-582)||(33457914-33458026)
chr3 (248-322)||(28421480-28421555)
chr3 (481-580)||(55036669-55036768)
chr3 (481-575)||(40256879-40256973)
chr3 (248-326)||(47005546-47005624)
chr3 (481-577)||(10749321-10749417)
chr3 (481-565)||(10998158-10998242)
chr3 (470-570)||(30654754-30654853)
chr3 (481-581)||(55036954-55037054)
chr3 (469-540)||(46670528-46670599)
chr3 (248-326)||(3369313-3369391)
chr3 (468-565)||(21255803-21255900)
chr3 (468-540)||(33989054-33989126)
chr3 (481-540)||(24576580-24576639)
chr3 (270-339)||(41907329-41907399)
chr3 (505-562)||(49667-49724)
chr3 (481-582)||(51279229-51279330)
chr3 (481-565)||(10749681-10749765)
chr3 (481-577)||(22129009-22129105)
chr3 (472-577)||(24576291-24576398)
chr3 (481-565)||(40257158-40257242)
chr3 (514-565)||(30890332-30890383)
chr3 (514-577)||(33458041-33458104)
chr3 (514-577)||(55036794-55036857)
chr3 (468-577)||(28310620-28310729)
chr3 (485-561)||(30654503-30654579)
chr3 (481-557)||(33989304-33989380)
chr3 (485-565)||(35432639-35432719)
chr3 (505-561)||(53037046-53037102)
[»] chr6 (47 HSPs)
chr6 (468-577)||(7612551-7612660)
chr6 (470-565)||(3299833-3299928)
chr6 (468-582)||(19296499-19296613)
chr6 (481-583)||(32337561-32337663)
chr6 (481-582)||(20774366-20774467)
chr6 (481-582)||(26503639-26503740)
chr6 (481-577)||(3299562-3299658)
chr6 (481-565)||(13480223-13480307)
chr6 (481-577)||(20994976-20995072)
chr6 (481-565)||(21880379-21880463)
chr6 (481-565)||(23292029-23292113)
chr6 (481-565)||(30234877-30234961)
chr6 (503-582)||(15819797-15819876)
chr6 (481-565)||(5064350-5064434)
chr6 (513-577)||(5064531-5064595)
chr6 (502-582)||(16704615-16704695)
chr6 (481-565)||(20994834-20994917)
chr6 (481-577)||(21880649-21880745)
chr6 (468-580)||(31879458-31879569)
chr6 (502-565)||(738003-738066)
chr6 (481-580)||(5064620-5064719)
chr6 (514-565)||(21544533-21544584)
chr6 (514-577)||(32337689-32337752)
chr6 (468-578)||(20774091-20774201)
chr6 (473-554)||(1066416-1066497)
chr6 (481-562)||(22494165-22494246)
chr6 (481-570)||(26542905-26542994)
chr6 (481-570)||(31879743-31879832)
chr6 (481-565)||(9607601-9607685)
chr6 (481-565)||(13480493-13480577)
chr6 (248-339)||(15484943-15485035)
chr6 (481-565)||(23291759-23291843)
chr6 (514-577)||(7612673-7612736)
chr6 (514-561)||(22494005-22494052)
chr6 (514-577)||(23291869-23291932)
chr6 (514-577)||(26542742-26542805)
chr6 (481-587)||(20560921-20561027)
chr6 (481-559)||(32337852-32337930)
chr6 (484-577)||(18865123-18865216)
chr6 (468-540)||(26542656-26542729)
chr6 (514-574)||(737896-737956)
chr6 (481-577)||(3586215-3586310)
chr6 (481-577)||(7612834-7612930)
chr6 (513-561)||(13480332-13480380)
chr6 (502-562)||(16706957-16707017)
chr6 (514-582)||(19296418-19296486)
chr6 (505-581)||(31393492-31393568)
[»] chr2 (39 HSPs)
chr2 (468-577)||(22309703-22309812)
chr2 (468-577)||(9694014-9694123)
chr2 (468-581)||(28599426-28599539)
chr2 (481-587)||(19606910-19607016)
chr2 (481-582)||(20911128-20911229)
chr2 (481-587)||(32519440-32519546)
chr2 (481-582)||(1149935-1150036)
chr2 (481-582)||(16366961-16367062)
chr2 (481-582)||(22309429-22309530)
chr2 (468-561)||(37984746-37984839)
chr2 (481-581)||(8089451-8089551)
chr2 (481-565)||(10446847-10446931)
chr2 (481-577)||(28599712-28599808)
chr2 (481-565)||(32519170-32519254)
chr2 (468-570)||(5608866-5608968)
chr2 (483-565)||(9958840-9958922)
chr2 (469-579)||(9959098-9959208)
chr2 (468-577)||(17366629-17366738)
chr2 (481-582)||(18476905-18477006)
chr2 (481-565)||(16367248-16367332)
chr2 (481-565)||(41846407-41846491)
chr2 (472-540)||(41846668-41846736)
chr2 (507-582)||(17284741-17284816)
chr2 (481-583)||(22731817-22731919)
chr2 (481-582)||(1150222-1150323)
chr2 (514-579)||(17580453-17580518)
chr2 (481-577)||(4375836-4375932)
chr2 (481-577)||(17580331-17580427)
chr2 (481-565)||(20911415-20911498)
chr2 (249-289)||(22193519-22193559)
chr2 (505-565)||(37985036-37985096)
chr2 (481-565)||(45663793-45663877)
chr2 (514-577)||(5608790-5608853)
chr2 (483-538)||(17366909-17366964)
chr2 (514-577)||(32519280-32519343)
chr2 (514-565)||(41846600-41846651)
chr2 (481-538)||(9693784-9693841)
chr2 (481-582)||(43681854-43681955)
chr2 (513-577)||(28599551-28599615)
[»] chr1 (61 HSPs)
chr1 (468-582)||(48380679-48380793)
chr1 (472-577)||(33030337-33030442)
chr1 (250-339)||(18650135-18650225)
chr1 (481-565)||(26953386-26953470)
chr1 (481-583)||(33347413-33347515)
chr1 (481-582)||(49003160-49003261)
chr1 (481-565)||(2953749-2953833)
chr1 (481-565)||(25415129-25415213)
chr1 (248-339)||(26759635-26759725)
chr1 (481-565)||(37152823-37152907)
chr1 (481-583)||(1047489-1047591)
chr1 (472-582)||(8890485-8890595)
chr1 (468-582)||(24701541-24701655)
chr1 (481-570)||(33347701-33347790)
chr1 (481-582)||(35311972-35312073)
chr1 (469-582)||(35312249-35312362)
chr1 (481-578)||(49002878-49002975)
chr1 (481-577)||(12577297-12577393)
chr1 (481-577)||(19755690-19755786)
chr1 (481-565)||(26953116-26953200)
chr1 (481-577)||(46849943-46850039)
chr1 (481-582)||(739217-739318)
chr1 (481-582)||(24701268-24701369)
chr1 (514-579)||(26953295-26953360)
chr1 (469-562)||(52455028-52455121)
chr1 (481-565)||(1040313-1040397)
chr1 (481-565)||(1047219-1047303)
chr1 (505-565)||(5926534-5926594)
chr1 (481-577)||(5926806-5926902)
chr1 (481-565)||(25414859-25414943)
chr1 (481-565)||(33030620-33030704)
chr1 (481-565)||(37152553-37152637)
chr1 (469-540)||(10019646-10019717)
chr1 (252-327)||(18628673-18628748)
chr1 (514-565)||(33030459-33030510)
chr1 (503-565)||(49990103-49990165)
chr1 (481-582)||(6056374-6056475)
chr1 (248-297)||(26924854-26924902)
chr1 (481-570)||(46364860-46364949)
chr1 (468-561)||(46545003-46545096)
chr1 (481-565)||(739503-739587)
chr1 (481-565)||(2953479-2953563)
chr1 (481-565)||(29043040-29043124)
chr1 (481-577)||(29980923-29981019)
chr1 (520-580)||(34176116-34176176)
chr1 (481-565)||(46364589-46364673)
chr1 (514-565)||(10019581-10019632)
chr1 (514-577)||(25415040-25415103)
chr1 (514-565)||(30830339-30830390)
chr1 (514-577)||(46364771-46364834)
chr1 (514-580)||(35312169-35312235)
chr1 (502-564)||(46849674-46849736)
chr1 (481-562)||(5183791-5183872)
chr1 (481-565)||(6056663-6056748)
chr1 (481-582)||(12577008-12577109)
chr1 (516-577)||(33347612-33347673)
chr1 (481-565)||(5183521-5183605)
chr1 (481-561)||(6334675-6334755)
chr1 (481-565)||(8890227-8890310)
chr1 (514-570)||(12577215-12577271)
chr1 (481-565)||(48380968-48381052)
[»] chr8 (52 HSPs)
chr8 (468-577)||(40422432-40422541)
chr8 (481-577)||(40422163-40422259)
chr8 (481-579)||(22763881-22763979)
chr8 (468-582)||(37713694-37713808)
chr8 (481-582)||(29190444-29190545)
chr8 (481-582)||(20096018-20096119)
chr8 (481-582)||(40525505-40525606)
chr8 (481-582)||(41251121-41251222)
chr8 (481-565)||(547720-547804)
chr8 (481-561)||(29190179-29190259)
chr8 (474-577)||(9632331-9632434)
chr8 (481-570)||(38619808-38619897)
chr8 (481-581)||(27857027-27857127)
chr8 (481-565)||(36623367-36623451)
chr8 (481-565)||(41801831-41801915)
chr8 (470-581)||(13566409-13566520)
chr8 (469-527)||(24529731-24529789)
chr8 (481-582)||(7678-7779)
chr8 (481-582)||(11478143-11478244)
chr8 (468-565)||(22763610-22763707)
chr8 (468-577)||(31689898-31690007)
chr8 (481-582)||(36623638-36623739)
chr8 (481-582)||(41182181-41182282)
chr8 (481-565)||(7408-7492)
chr8 (469-577)||(15716149-15716257)
chr8 (481-565)||(31690181-31690264)
chr8 (481-565)||(37343067-37343151)
chr8 (481-565)||(43866726-43866810)
chr8 (481-565)||(43866996-43867080)
chr8 (502-565)||(20096330-20096393)
chr8 (514-577)||(23424637-23424700)
chr8 (486-577)||(24529946-24530037)
chr8 (481-540)||(25287832-25287891)
chr8 (248-339)||(10658884-10658978)
chr8 (481-563)||(40525792-40525874)
chr8 (505-582)||(9632612-9632689)
chr8 (514-579)||(15716070-15716135)
chr8 (481-582)||(35163495-35163596)
chr8 (516-577)||(41182023-41182084)
chr8 (481-565)||(547445-547529)
chr8 (481-577)||(23424515-23424611)
chr8 (481-565)||(23424797-23424881)
chr8 (514-577)||(11478270-11478333)
chr8 (481-540)||(11478430-11478489)
chr8 (514-577)||(22763720-22763783)
chr8 (249-322)||(25140386-25140461)
chr8 (514-577)||(25287917-25287980)
chr8 (502-565)||(26740024-26740087)
chr8 (523-578)||(40933179-40933234)
chr8 (514-570)||(9632453-9632509)
chr8 (481-565)||(37342797-37342881)
chr8 (514-562)||(40422371-40422419)
[»] chr5 (36 HSPs)
chr5 (468-577)||(7015781-7015890)
chr5 (481-582)||(33735598-33735699)
chr5 (468-552)||(27753751-27753835)
chr5 (468-582)||(22024142-22024256)
chr5 (472-565)||(21260880-21260973)
chr5 (481-582)||(32052509-32052610)
chr5 (481-565)||(12991073-12991157)
chr5 (481-565)||(13064694-13064778)
chr5 (481-577)||(14745451-14745547)
chr5 (469-577)||(34404487-34404594)
chr5 (481-582)||(6421907-6422008)
chr5 (481-565)||(25253371-25253455)
chr5 (481-565)||(25317162-25317246)
chr5 (468-582)||(22533662-22533776)
chr5 (481-570)||(27753489-27753577)
chr5 (481-582)||(37945279-37945379)
chr5 (481-577)||(7015511-7015607)
chr5 (481-577)||(8323341-8323437)
chr5 (481-565)||(14745598-14745682)
chr5 (469-561)||(18934732-18934824)
chr5 (481-561)||(25253105-25253185)
chr5 (481-561)||(25316895-25316975)
chr5 (481-565)||(32052239-32052323)
chr5 (481-577)||(37944997-37945093)
chr5 (514-577)||(16118147-16118210)
chr5 (516-565)||(41339562-41339611)
chr5 (514-582)||(16117959-16118027)
chr5 (481-565)||(33735328-33735412)
chr5 (514-565)||(12628340-12628391)
chr5 (514-577)||(22533586-22533649)
chr5 (514-577)||(33735509-33735572)
chr5 (514-576)||(6421819-6421881)
chr5 (481-581)||(6421621-6421721)
chr5 (472-580)||(8323056-8323164)
chr5 (502-582)||(22533388-22533468)
chr5 (248-339)||(34793078-34793169)
[»] chr7 (32 HSPs)
chr7 (469-581)||(20947192-20947304)
chr7 (468-577)||(5280543-5280652)
chr7 (502-582)||(5636331-5636411)
chr7 (481-582)||(34454765-34454866)
chr7 (468-566)||(5636040-5636137)
chr7 (469-570)||(27557858-27557959)
chr7 (481-582)||(34454482-34454583)
chr7 (481-582)||(47081845-47081946)
chr7 (481-565)||(12931023-12931107)
chr7 (481-565)||(43938179-43938263)
chr7 (468-580)||(44545867-44545979)
chr7 (503-577)||(47121585-47121659)
chr7 (481-565)||(12929539-12929623)
chr7 (481-557)||(20947479-20947555)
chr7 (481-561)||(23191139-23191218)
chr7 (481-577)||(27558137-27558233)
chr7 (481-579)||(35262627-35262725)
chr7 (248-339)||(20117951-20118045)
chr7 (481-582)||(26825628-26825729)
chr7 (481-582)||(26825915-26826016)
chr7 (485-565)||(5280287-5280367)
chr7 (513-565)||(5636149-5636201)
chr7 (514-582)||(7159246-7159314)
chr7 (468-587)||(15827993-15828113)
chr7 (481-565)||(43937909-43937993)
chr7 (514-577)||(27557973-27558036)
chr7 (514-577)||(34454676-34454739)
chr7 (484-583)||(37563642-37563741)
chr7 (514-580)||(47082040-47082106)
chr7 (514-587)||(19980211-19980284)
chr7 (481-562)||(37563372-37563453)
chr7 (481-577)||(12928324-12928420)
[»] scaffold0233 (1 HSPs)
scaffold0233 (468-577)||(8436-8545)
[»] scaffold0206 (1 HSPs)
scaffold0206 (481-582)||(10323-10424)
[»] scaffold0202 (2 HSPs)
scaffold0202 (468-580)||(14235-14347)
scaffold0202 (481-577)||(14519-14615)
[»] scaffold0279 (3 HSPs)
scaffold0279 (469-570)||(11130-11231)
scaffold0279 (481-577)||(10856-10952)
scaffold0279 (514-577)||(11053-11116)
[»] scaffold1493 (2 HSPs)
scaffold1493 (481-540)||(878-937)
scaffold1493 (514-577)||(789-852)
[»] scaffold0022 (2 HSPs)
scaffold0022 (514-565)||(120324-120375)
scaffold0022 (472-584)||(120201-120307)
[»] scaffold0321 (1 HSPs)
scaffold0321 (514-576)||(10787-10849)


Alignment Details
Target: chr4 (Bit Score: 281; Significance: 1e-157; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 40 - 339
Target Start/End: Complemental strand, 45199668 - 45199368
Alignment:
Q  40 aacttaaagtcatcgaagtgttac-ctaaacctaacagatacatgtcaattttatatatatccgatatttaaaaaattaataaaccaaatatatattgac 138  Q
    |||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45199668 aacttaaagtcatcgaagtgttactctaaacctaatatatacatgtcaattttatatatatccgatatttaaaaaattaataaaccaaatatatattgac 45199569  T
Q  139 gaaaactatctaagacacaacaagtaagtactacaaatacaaaactcaaaatagacatacaatatcaaagccaactcaaatacaagctagcacacaacca 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45199568 gaaaactatctaagacacaacaagtaagtactacaaatacaaaactcaaaatagacatacaatatcaaagccaactcaaatacaagctagcacacaacca 45199469  T
Q  239 atacaacacgattagagtagatccacttgtactgatttatcacgatgtattttcgtttgagttttcctaggtcaggtcttatgtcccctagtctttgtat 338  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  45199468 atacaacacgattagagtagatccacttgtactgatttatcacgatgtattttcatttgagttttcctaggtcaggtcttatgtcccctagtctttgtat 45199369  T
Q  339 c 339  Q
    |    
T  45199368 c 45199368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 387 - 655
Target Start/End: Complemental strand, 45199320 - 45199053
Alignment:
Q  387 tacaacaccacctaccaaaaagaactgtacatgtacactcagaccaaggaagattaacacataataggatagtaacttcatggaccatttttctaatgat 486  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  45199320 tacaacaccacctaccaaaaagaactgtacatgtacacccagaccaaggaagattaacacataataggatagtaatttcatggaccatttttcaaatgat 45199221  T
Q  487 taatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaaccttgatt 586  Q
    |||||||||||||  || |||| ||| |||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||| ||||||||||||||    
T  45199220 taatatttgcactgtcatattgaaaggattagtaacttcagagacgaaaattcagatgatttatatttgcggggacgaaagacccttttaaaccttgatt 45199121  T
Q  587 taaacttgaatccttttaacatttgatttgaactgccaccgtgacatgaattagatatattctaagcat 655  Q
    ||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  45199120 taaacttgaatcc-tctaacatttgatttgaactgccaccatgacatgaattagatatattctaagcat 45199053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 468 - 583
Target Start/End: Original strand, 35730933 - 35731048
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 567  Q
    |||| ||||||| ||||||||||||||||| | ||| | |||||| |||||||||||||| |||||||||||| || |  |||||||||||||||||| |    
T  35730933 ggactatttttcaaatgattaatatttgcaatgacataatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaag 35731032  T
Q  568 acccatttaaaccttg 583  Q
    ||| | ||||||||||    
T  35731033 acctacttaaaccttg 35731048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 470 - 577
Target Start/End: Original strand, 37678122 - 37678229
Alignment:
Q  470 accatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgac 569  Q
    |||||||||| ||||||||||||||||| |  ||||||||||| |||||||||||||| |||||||||| | ||   ||||||||||||||||||| |||    
T  37678122 accatttttcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagggacgaaaatttaaatggcttatatttgcagggacgaaagac 37678221  T
Q  570 ccatttaa 577  Q
    | ||||||    
T  37678222 ctatttaa 37678229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 468 - 582
Target Start/End: Complemental strand, 8287044 - 8286930
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 567  Q
    |||||||||||| ||||||||||||||||| |  || | |||||| |||| |||||||||||||||||||||| ||   ||||||||||||||||||| |    
T  8287044 ggaccatttttcaaatgattaatatttgcaatggcaaaatggaaggattattaacttcagagacgaaaattcaaatggcttatatttgcagggacgaaag 8286945  T
Q  568 acccatttaaacctt 582  Q
    ||| |||||| ||||    
T  8286944 acctatttaagcctt 8286930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 470 - 584
Target Start/End: Original strand, 50246132 - 50246246
Alignment:
Q  470 accatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgac 569  Q
    |||||||||| ||||||||||||||||| | |||||||||||| |||||||||||||  |||||||||||| || |  |||||||||||||| ||| ||     
T  50246132 accatttttcaaatgattaatatttgcagtgacagattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagat 50246231  T
Q  570 ccatttaaaccttga 584  Q
    | |||||| ||||||    
T  50246232 ctatttaagccttga 50246246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 47981921 - 47982005
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    ||||||||||| ||||||||||||||||||||||||||| ||| | ||||||||||||||||||    
T  47981921 aatgattaatatttgcaggggcagattggaaggattagtaacttcagagacgaaaattcaaatagtctatatttgcagggacgaa 47982005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 502 - 582
Target Start/End: Original strand, 48507723 - 48507803
Alignment:
Q  502 cagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacctt 582  Q
    ||||||||||| ||||||||||||||||||||||||||| || |  |||||||| ||||||||| |||| |||||||||||    
T  48507723 cagattggaaggattagtaacttcagagacgaaaattcaaatgacctatatttgtagggacgaaagacctatttaaacctt 48507803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 481 - 582
Target Start/End: Complemental strand, 54961530 - 54961429
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    || |||||||| |||||||||||||| |||||||||||| ||  | |||||||||||||||||| |||| |||||| ||    
T  54961530 aatgattaatatttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaagacctatttaagcc 54961431  T
Q  581 tt 582  Q
    ||    
T  54961430 tt 54961429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 13872354 - 13872438
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    |||||||||||||||||||||||||| ||| |||||||| |||   ||||||||||||||||||    
T  13872354 aatgattaatatttgcaggggcagattggaagaattagtaacttcagggacaaaaattcaaatagactatatttgcagggacgaa 13872438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 469 - 565
Target Start/End: Original strand, 19916929 - 19917025
Alignment:
Q  469 gaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    ||||||||||| ||||||||||||||||| |  ||||||| ||  ||||||||||||| ||||||||||| | || |  ||||||||||||||||||    
T  19916929 gaccatttttcaaatgattaatatttgcagtggcagattgaaatgattagtaacttcaaagacgaaaatttaaatgacctatatttgcagggacgaa 19917025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 481 - 577
Target Start/End: Complemental strand, 47862251 - 47862155
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||| ||||||||    ||||||||||| ||||||||||||||||||||||||||| || |  |||||||||||||| ||| |||| ||||||    
T  47862251 aatgattagtatttgcaggggcagattggaaggattagtaacttcagagacgaaaattcaaatgacatatatttgcagggatgaaagacctatttaa 47862155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 481 - 577
Target Start/End: Complemental strand, 47980784 - 47980688
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||||||   | |||||||||| || ||||||||||| |||||||||||| ||  | |||||||||||||||||| |||| ||||||    
T  47980784 aatgattaatatttgcagggatagattggaaggatcagtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaagacctatttaa 47980688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 582
Target Start/End: Original strand, 8287218 - 8287319
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||  |||||| |  ||||||||||| |||||||||||||| |||||||||||| ||    |||||||||||||||||| |||| |||||| ||    
T  8287218 aatgattaaattttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacctatttaagcc 8287317  T
Q  581 tt 582  Q
    ||    
T  8287318 tt 8287319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 577
Target Start/End: Complemental strand, 12691505 - 12691409
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    ||||||||||||||| |   |||||||||||| |||||||||||||| |||||||||||| ||    |||||||||| ||||||| |||| ||||||    
T  12691505 aatgattaatatttgtagggacagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcatggacgaaagacctatttaa 12691409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 19916755 - 19916671
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    ||||||||||||||||| |  ||||||||||| |||||||||||||| | |||||||| | || |  ||||||||||||||||||    
T  19916755 aatgattaatatttgcagtggcagattggaaggattagtaacttcaggggcgaaaatttaaatgacctatatttgcagggacgaa 19916671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 22249832 - 22249748
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    ||||||| ||| |||||||||||||  |||||||||||| || || ||||||||||||||||||    
T  22249832 aatgattaatatttgcaggggcagattgaaaggattagtaacttcatggacgaaaattcaaatgatctatatttgcagggacgaa 22249748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 582
Target Start/End: Original strand, 12691690 - 12691791
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    | ||||||||| |||||||||||||| ||| |||||||| || |  |||||||||||||||||| |||  |||||| ||    
T  12691690 aatgattaatatttgcaggggcggattggaaggattagtaacttcagggacaaaaattcaaatgacctatatttgcagggacgaaagacatatttaaccc 12691789  T
Q  581 tt 582  Q
    ||    
T  12691790 tt 12691791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 521 - 582
Target Start/End: Complemental strand, 35730721 - 35730660
Alignment:
Q  521 acttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacctt 582  Q
    |||||||||||||||||||| || | ||||||||||||||||||| |||| |||||| ||||    
T  35730721 acttcagagacgaaaattcaaatgacttatatttgcagggacgaaagacctatttaagcctt 35730660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 582
Target Start/End: Original strand, 53559672 - 53559773
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    ||||||||||  |||||||||||||| |||||||||||| ||    |||||||||||||||||| |||  |||||| ||    
T  53559672 aatgattaatatttgcaggggcagattggaacgattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagcc 53559771  T
Q  581 tt 582  Q
    ||    
T  53559772 tt 53559773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 22250018 - 22250102
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    || ||||||||||||||||| ||||| |||||||||||| ||    ||||||||||||||||||    
T  22250018 aatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatggcctatatttgcagggacgaa 22250102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 577
Target Start/End: Complemental strand, 37677947 - 37677851
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||  |||||| |  ||||| ||||| |||||||||||||| |||||||||||| || |  |||||||||||||| ||| |||| ||||||    
T  37677947 aatgattaaattttgcagtggcagatcggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggaagaaagacctatttaa 37677851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 581
Target Start/End: Complemental strand, 50245956 - 50245856
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    ||||||||||||||||| |  ||||||||||  |||||||||||||  || ||||||||| || |  ||||||| |||||||||| || | |||||||||    
T  50245956 aatgattaatatttgcagtggcagattggaatgattagtaacttcatggatgaaaattcaaatgacctatatttacagggacgaaagatctatttaaacc 50245857  T
Q  581 t 581  Q
    |    
T  50245856 t 50245856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 481 - 540
Target Start/End: Complemental strand, 20086536 - 20086477
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattca 540  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| ||||||||||||    
T  20086536 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattca 20086477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 481 - 576
Target Start/End: Complemental strand, 34238569 - 34238474
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccattta 576  Q
    |||||||||||||||||    || |||| ||| ||||||||||||||||||||||||||| |||   ||||||| || ||||||| |||| |||||    
T  34238569 aatgattaatatttgcaggggcatattgaaaggattagtaacttcagagacgaaaattcaaatagcctatatttacaaggacgaaagacctattta 34238474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 514 - 577
Target Start/End: Complemental strand, 37678107 - 37678044
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||| |||||||||||| || |  |||||||||||||||||| |||| ||||||    
T  37678107 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaa 37678044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 514 - 565
Target Start/End: Original strand, 48507539 - 48507590
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||| |||||||||||| || | |||||||||||||||||||    
T  48507539 attagtaacttcagggacgaaaattcaaatgacttatatttgcagggacgaa 48507590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 468 - 570
Target Start/End: Complemental strand, 20601059 - 20600957
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 567  Q
    |||| ||||||| ||| ||||||| ||||| |  || |||||||||||||| ||||||| | ||||||||||| || |  |||||||| ||||||||| |    
T  20601059 ggacaatttttcaaattattaatagttgcagtggcaaattggaagaattagcaacttcaaaaacgaaaattcaaatgacctatatttgaagggacgaaag 20600960  T
Q  568 acc 570  Q
    |||    
T  20600959 acc 20600957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 565
Target Start/End: Complemental strand, 13872144 - 13872084
Alignment:
Q  505 attggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||| |||| ||||||||  |||||||||||| ||||  ||||||||||||||||||    
T  13872144 attggaaggattaataacttcatggacgaaaattcaaataacctatatttgcagggacgaa 13872084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 470 - 562
Target Start/End: Complemental strand, 27813159 - 27813067
Alignment:
Q  470 accatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggac 562  Q
    |||||||||| |||||||| |||||||| | ||| | |||||| || ||||||||||  ||  |||||||| || | ||||||||||||||||    
T  27813159 accatttttcaaatgattagtatttgcaatgacaaaatggaaggatcagtaacttcatggataaaaattcaaatgacttatatttgcagggac 27813067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 469 - 577
Target Start/End: Complemental strand, 32846473 - 32846365
Alignment:
Q  469 gaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatga 568  Q
    ||||||||||| ||||||||||||||||| |  || | |||||| |||| |||||||||  ||||||||||| ||    |||||||||| | ||||| ||    
T  32846473 gaccatttttcaaatgattaatatttgcaatggcaaaatggaaggattaataacttcaggaacgaaaattcaaatggcctatatttgcaagcacgaaaga 32846374  T
Q  569 cccatttaa 577  Q
    || ||||||    
T  32846373 cctatttaa 32846365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 561
Target Start/End: Original strand, 33294428 - 33294508
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcaggga 561  Q
    |||||||||||||||||    ||||| ||||| |||||||||||||| |||||||||||| ||    ||||||||||||||    
T  33294428 aatgattaatatttgcaggggcagatcggaaggattagtaacttcagggacgaaaattcaaattgcctatatttgcaggga 33294508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 577
Target Start/End: Original strand, 8287057 - 8287120
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||| |||||||||||| || |  |||||||||||| ||||| |||| ||||||    
T  8287057 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 8287120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 577
Target Start/End: Complemental strand, 19740926 - 19740863
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||| |||||||||||| || |  |||||||||| ||||||| |||| ||||||    
T  19740926 attagtaacttcagggacgaaaattcaaatgacatatatttgcaaggacgaaagacctatttaa 19740863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 337
Target Start/End: Original strand, 21121943 - 21122002
Alignment:
Q  278 tcacgatgtattttcgtttgagttttcctaggtcaggtcttatgtcccctagtctttgta 337  Q
    ||||||||||||  |||||||||||||||||||||||||  ||| ||||  |||||||||    
T  21121943 tcacgatgtattcccgtttgagttttcctaggtcaggtccaatgcccccccgtctttgta 21122002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 577
Target Start/End: Complemental strand, 26601335 - 26601272
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||| |||||||||||||||||||||| || | ||||||||| ||||| ||| |||| ||||||    
T  26601335 attaataacttcagagacgaaaattcaaatgacttatatttgtagggatgaaagacctatttaa 26601272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 522 - 577
Target Start/End: Original strand, 27813181 - 27813236
Alignment:
Q  522 cttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||| |||||||||||| || || |||||||||||||||||| |||| ||||||    
T  27813181 cttcagggacgaaaattcaaatgatctatatttgcagggacgaaagacctatttaa 27813236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 577
Target Start/End: Original strand, 47862277 - 47862340
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||| |||||||||||| || |  |||||||||||||| ||| |||| ||||||    
T  47862277 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 47862340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 502 - 565
Target Start/End: Original strand, 54961737 - 54961800
Alignment:
Q  502 cagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    ||||||| ||| |||||||||||||| ||| |||||||| || |  ||||||||||||||||||    
T  54961737 cagattgaaaggattagtaacttcagggactaaaattcaaatgacctatatttgcagggacgaa 54961800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 562
Target Start/End: Complemental strand, 33294243 - 33294162
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggac 562  Q
    |||||||||||||||||    || |||||||| |||||||||||||  ||| |||||||| ||||  |||||||||| ||||    
T  33294243 aatgattaatatttgcaggggcaaattggaaggattagtaacttcatggacaaaaattcaaataacctatatttgcatggac 33294162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 577
Target Start/End: Complemental strand, 37732373 - 37732300
Alignment:
Q  504 gattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||| |||| ||||||||||||| | ||||||||||| || |  |||||||||||||| ||| |||| ||||||    
T  37732373 gattagaaggattagtaacttcaaaaacgaaaattcaaatgacatatatttgcagggatgaaagacctatttaa 37732300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 514 - 570
Target Start/End: Original strand, 53559512 - 53559568
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacc 570  Q
    |||||||||||||| |||||||||||| || |  |||||||||||||| ||| ||||    
T  53559512 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacc 53559568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 2e-26; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 468 - 577
Target Start/End: Complemental strand, 30803958 - 30803849
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 567  Q
    |||||||||||| | ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || |  |||| ||| ||||||||| |    
T  30803958 ggaccatttttcaattgattaatatttgcagtgacagattggaagaattagtaacttcagagacgaaaattcaaatgacctatagttgaagggacgaaag 30803859  T
Q  568 acccatttaa 577  Q
    ||| ||||||    
T  30803858 acctatttaa 30803849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 481 - 581
Target Start/End: Original strand, 21300418 - 21300518
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||| ||   ||||| || ||| ||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||| |||||||||    
T  21300418 aatgattaatatttacagggacagactgaaaggattagtaacttcagagacgaaaattcaaataacatatatttgcagggacgaaagacctatttaaacc 21300517  T
Q  581 t 581  Q
    |    
T  21300518 t 21300518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 481 - 577
Target Start/End: Original strand, 33458203 - 33458299
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    ||||||||||||||||| | ||||||| |||| |||||||||||||| ||||| |||||| || |  |||||||||||||||||| |||| ||||||    
T  33458203 aatgattaatatttgcagtgacagattagaaggattagtaacttcagggacgacaattcaaatgacctatatttgcagggacgaaagacctatttaa 33458299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 1741486 - 1741402
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| |||||||||||| || |  ||||||||||||||||||    
T  1741486 aatgattaatatttgcaagggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaa 1741402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 30804133 - 30804217
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    ||||||||||||||||| | |||||||||||| ||||||||||||||  ||||||||||| || || |||||||  |||||||||    
T  30804133 aatgattaatatttgcagtgacagattggaaggattagtaacttcaggaacgaaaattcaaatgatatatatttaaagggacgaa 30804217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 470 - 582
Target Start/End: Complemental strand, 33458026 - 33457914
Alignment:
Q  470 accatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgac 569  Q
    |||||||||| ||||||||||||||||| | ||| |||  ||| |||||||||||||||| | |||||||| || ||  |||||| || ||||||| |||    
T  33458026 accatttttcaaatgattaatatttgcagtgacatattaaaaggattagtaacttcagaggcaaaaattcaaatgatccatatttacatggacgaaagac 33457927  T
Q  570 ccatttaaacctt 582  Q
    | |||||||||||    
T  33457926 ctatttaaacctt 33457914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 248 - 322
Target Start/End: Original strand, 28421480 - 28421555
Alignment:
Q  248 gattagagtagatccacttgtactgatttatcacgatgtattttcgtttgagtt-ttcctaggtcaggtcttatgt 322  Q
    |||||||||||||||||||| |||| ||||||||| ||||||| || ||||||| |||||||||||||||| ||||    
T  28421480 gattagagtagatccacttggactgttttatcacgttgtatttccgcttgagttattcctaggtcaggtctaatgt 28421555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 481 - 580
Target Start/End: Complemental strand, 55036768 - 55036669
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    ||||||||||| ||||||||||||||  | ||||||||| || |  |||||||||||||||||| |||| |||||||||    
T  55036768 aatgattaatatttgcaggggcagattggaaggattagtaacttcaggaatgaaaattcaaatgacctatatttgcagggacgaaagacctatttaaacc 55036669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 481 - 575
Target Start/End: Complemental strand, 40256973 - 40256879
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccattt 575  Q
    |||||||||||||||||    || |||||||| |||||||||||||| |||||||||||| ||||  |||||||||| ||||||| |||| ||||    
T  40256973 aatgattaatatttgcaagggcatattggaaggattagtaacttcagggacgaaaattcaaataacctatatttgcatggacgaaagacctattt 40256879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 248 - 326
Target Start/End: Complemental strand, 47005624 - 47005546
Alignment:
Q  248 gattagagtagatccacttgtactgatttatcacgatgtattttcgtttgagttttcctaggtcaggtcttatgtcccc 326  Q
    |||||||||||||||||||| |||| ||||||||||||||||   ||||| ||| ||||||||| |||| |||||||||    
T  47005624 gattagagtagatccacttggactgctttatcacgatgtattcctgtttgggttatcctaggtctggtcctatgtcccc 47005546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 577
Target Start/End: Complemental strand, 10749417 - 10749321
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||||||   | ||||| |||| |||||||||||||| |||||||||||| || |  ||||||| |||||||||| |||| ||||||    
T  10749417 aatgattaatatttgcagggatagattagaaggattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaagacctatttaa 10749321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 10998158 - 10998242
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| |||||||||||| || |  ||||||||||| ||||||    
T  10998158 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagagacgaa 10998242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 470 - 570
Target Start/End: Original strand, 30654754 - 30654853
Alignment:
Q  470 accatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgac 569  Q
    |||||||||| ||||||||||||| ||| |  |||||| |||| || |||||||||| ||||||||||||| || |  |||||||||||||||||| |||    
T  30654754 accatttttcaaatgattaatatt-gcagtggcagattagaaggatcagtaacttcatagacgaaaattcaaatgacctatatttgcagggacgaaagac 30654852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 581
Target Start/End: Original strand, 55036954 - 55037054
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    ||||||||||| |||||||||||||   ||||||||||| || |  |||||||||||||||||| |||  |||||||||    
T  55036954 aatgattaatatttgcaggggcagattggaaggattagtaacttcaagaacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaaacc 55037053  T
Q  581 t 581  Q
    |    
T  55037054 t 55037054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 469 - 540
Target Start/End: Original strand, 46670528 - 46670599
Alignment:
Q  469 gaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattca 540  Q
    ||||||||||  ||||||||||||||||| | ||| | ||||||||||||||||||||| || |||||||||    
T  46670528 gaccattttttaaatgattaatatttgcaatgacaaaatggaagaattagtaacttcagggatgaaaattca 46670599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 248 - 326
Target Start/End: Complemental strand, 3369391 - 3369313
Alignment:
Q  248 gattagagtagatccacttgtactgatttatcacgatgtattttcgtttgagttttcctaggtcaggtcttatgtcccc 326  Q
    ||||| |||||||||||||  |||| ||||||||| ||||||  |||||| ||| |||| |||||||||||||||||||    
T  3369391 gattaaagtagatccacttagactgctttatcacgctgtattcccgtttgggttatcctgggtcaggtcttatgtcccc 3369313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 468 - 565
Target Start/End: Original strand, 21255803 - 21255900
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||| |||||||||||||| || |  || | |||||| ||||||||||| |  |||||||||||| || || |||||||||||| |||||    
T  21255803 ggaccatttttcaaatgattaatatttacaatggcaaaatggaagcattagtaactttatggacgaaaattcaaatgatctatatttgcaggaacgaa 21255900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 468 - 540
Target Start/End: Complemental strand, 33989126 - 33989054
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattca 540  Q
    |||||||||||| ||| ||||||||||||| |  ||||||||||| ||||||||||| ||  |||||||||||    
T  33989126 ggaccatttttcaaataattaatatttgcagtggcagattggaaggattagtaacttaaggtacgaaaattca 33989054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 481 - 540
Target Start/End: Original strand, 24576580 - 24576639
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattca 540  Q
    |||||||||||||||||||  ||||||||||| |||||||| |||| ||| |||||||||    
T  24576580 aatgattaatatttgcactggcagattggaaggattagtaatttcaaagatgaaaattca 24576639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 339
Target Start/End: Original strand, 41907329 - 41907399
Alignment:
Q  270 ctgatttatcacgatgtattttcgtttgagtt-ttcctaggtcaggtcttatgtcccctagtctttgtatc 339  Q
    ||||||||||| | |||||||||||||| ||| ||||| |||||||||| |||||||| | ||||||||||    
T  41907329 ctgatttatcatgctgtattttcgtttgggttattcctgggtcaggtctgatgtcccccaatctttgtatc 41907399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 562
Target Start/End: Complemental strand, 49724 - 49667
Alignment:
Q  505 attggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggac 562  Q
    ||||||||||||||||| ||||| ||||||| |||| |||  ||||||||||||||||    
T  49724 attggaagaattagtaatttcagggacgaaatttcaaatagcttatatttgcagggac 49667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 481 - 582
Target Start/End: Complemental strand, 51279330 - 51279229
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    || |||| ||  |||||||||||| | |||||||||||| ||||  |||||||||||||||||| |||  |||||| ||    
T  51279330 aatgattaatatttgcaggggcaaattgaaatgattagtaacttctgggacgaaaattcaaataacctatatttgcagggacgaaagacatatttaagcc 51279231  T
Q  581 tt 582  Q
    ||    
T  51279230 tt 51279229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 10749681 - 10749765
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    ||||||||||||||||     ||||||||||  |||||||||||||| |||||||||| | || |  ||||||||||||||||||    
T  10749681 aatgattaatatttgctgaggcagattggaaagattagtaacttcagggacgaaaatttaaatgacctatatttgcagggacgaa 10749765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 577
Target Start/End: Complemental strand, 22129105 - 22129009
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||||||    || |||||||| |||||||||||||| |||||||||||| |||   ||||||| | |||| ||| |||| ||||||    
T  22129105 aatgattaatatttgcaggggcaaattggaaggattagtaacttcagtgacgaaaattcaaatagcctatatttacggggatgaaagacctatttaa 22129009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 472 - 577
Target Start/End: Complemental strand, 24576398 - 24576291
Alignment:
Q  472 catttttctaatgattaatattt--gcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgac 569  Q
    |||||||| |||||||||| |||  ||| |  |||||| |||| |||||||| ||||  |||||||||||| ||   ||||||||||||||||||| |||    
T  24576398 catttttcaaatgattaatttttttgcagttgcagattagaaggattagtaatttcatggacgaaaattcaaatggcttatatttgcagggacgaaagac 24576299  T
Q  570 ccatttaa 577  Q
    | ||||||    
T  24576298 ctatttaa 24576291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 40257158 - 40257242
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    ||||||| ||  |||||||| ||||| |||||||||||| |||| ||||||||  |||||||||    
T  40257158 aatgattaatatttgcaggggcagattgaaatgattagtaatttcagggacgaaaattcaaataacttatatttatagggacgaa 40257242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 565
Target Start/End: Original strand, 30890332 - 30890383
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||| |||||||||||| || | |||||||||| ||||||||    
T  30890332 attagtaacttcagggacgaaaattcaaatgacttatatttgctgggacgaa 30890383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 577
Target Start/End: Original strand, 33458041 - 33458104
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    ||||||||||| ||||||||||||||| || |  |||||||| ||||||||| |||| ||||||    
T  33458041 attagtaactttagagacgaaaattcaaatgacctatatttgtagggacgaaagacctatttaa 33458104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 577
Target Start/End: Original strand, 55036794 - 55036857
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||| |||||||||||| || |  |||||||||||||| ||| |||| ||||||    
T  55036794 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 55036857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 577
Target Start/End: Original strand, 28310620 - 28310729
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 567  Q
    |||||||||||| ||||||||||||||||| |  || | |||||  ||||||||||| || | |||| ||||| || |  ||||||||| || ||||| |    
T  28310620 ggaccatttttcaaatgattaatatttgcaatggcaaaatggaaagattagtaactttagggtcgaagattcaaatgacctatatttgctggaacgaaag 28310719  T
Q  568 acccatttaa 577  Q
    ||| ||||||    
T  28310720 acctatttaa 28310729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 485 - 561
Target Start/End: Complemental strand, 30654579 - 30654503
Alignment:
Q  485 attaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcaggga 561  Q
    |||||||||| || || ||||||||||  |||||||||||||  ||||||| |||| |  | |||||||||||||||    
T  30654579 attaatatttacagtagcagattggaaatattagtaacttcaaggacgaaatttcaaacgacttatatttgcaggga 30654503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 481 - 557
Target Start/End: Original strand, 33989304 - 33989380
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgca 557  Q
    |||||||||||| || | | ||| |||||||| |||| ||||||||  |||||||||||| || || ||||||||||    
T  33989304 aatgattaatatctgtagtgacaaattggaaggattactaacttcatggacgaaaattcaaatgatatatatttgca 33989380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 485 - 565
Target Start/End: Original strand, 35432639 - 35432719
Alignment:
Q  485 attaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    ||||||||||||| |  ||||||||||| |||| |||||| |   ||||||||||| |||| |||||||| |||| |||||    
T  35432639 attaatatttgcagtggcagattggaaggattaataactttatgaacgaaaattcaaataacttatatttacaggaacgaa 35432719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 561
Target Start/End: Complemental strand, 53037102 - 53037046
Alignment:
Q  505 attggaagaattagtaacttcagagacgaaaattcagataatttatatttgcaggga 561  Q
    |||||||| |||||||||||||| |||||||||||| || |  ||||||| ||||||    
T  53037102 attggaaggattagtaacttcagggacgaaaattcaaatgacctatatttacaggga 53037046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 5e-24; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 468 - 577
Target Start/End: Complemental strand, 7612660 - 7612551
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 567  Q
    |||||||||||| ||||||||||||||||| | ||| | || |||||||||||||||||| |||||||||||| ||  | |||||||||||||||||| |    
T  7612660 ggaccatttttcaaatgattaatatttgcaatgacaaaatgaaagaattagtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaag 7612561  T
Q  568 acccatttaa 577  Q
    ||| ||||||    
T  7612560 acctatttaa 7612551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 470 - 565
Target Start/End: Original strand, 3299833 - 3299928
Alignment:
Q  470 accatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||| ||||||||||||||||| |  ||||||||||| |||||||||||||  |||||||||||| || |  ||||||||||||||||||    
T  3299833 accatttttcaaatgattaatatttgcaatggcagattggaaggattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaa 3299928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 468 - 582
Target Start/End: Original strand, 19296499 - 19296613
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 567  Q
    |||||||||||| ||||||||||||||||| |   ||||||| | |||||||||||||||  ||||||||||| || |  |||||||||| ||||||| |    
T  19296499 ggaccatttttcaaatgattaatatttgcagtggtagattggcaaaattagtaacttcaggaacgaaaattcaaatgacatatatttgcaaggacgaaag 19296598  T
Q  568 acccatttaaacctt 582  Q
    ||| |||||||||||    
T  19296599 acctatttaaacctt 19296613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 481 - 583
Target Start/End: Complemental strand, 32337663 - 32337561
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    || |||||||| |||||||||||||| |||||||||||| ||  | |||||||||||||||||| |||| |||||||||    
T  32337663 aatgattaatatttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaagacctatttaaacc 32337564  T
Q  581 ttg 583  Q
    |||    
T  32337563 ttg 32337561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 582
Target Start/End: Original strand, 20774366 - 20774467
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||  |||||| |  ||||||| |||||||||||||||||||||||||||| || || |  ||||||||||| |||||| |||| |||||| ||    
T  20774366 aatgattaaattttgcagtggcagattgaaagaattagtaacttcagagacgaaaatacaaatgacctatatttgcagagacgaaagacctatttaagcc 20774465  T
Q  581 tt 582  Q
    ||    
T  20774466 tt 20774467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 582
Target Start/End: Original strand, 26503639 - 26503740
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    ||||||||||||||||| |  | ||||||||| |||| ||||||||  |||||||||||| || | |||||||||||||||||||  ||| |||||| ||    
T  26503639 aatgattaatatttgcagtggcggattggaaggattaataacttcatggacgaaaattcaaatgacttatatttgcagggacgaaaaacctatttaagcc 26503738  T
Q  581 tt 582  Q
    ||    
T  26503739 tt 26503740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 577
Target Start/End: Complemental strand, 3299658 - 3299562
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    ||||||||||||||||| |  || |||||||  |||||||||||||  |||||||||||| || | |||||||||||| |||||| |||| ||||||    
T  3299658 aatgattaatatttgcaatggcaaattggaatgattagtaacttcatggacgaaaattcaaatgacttatatttgcagagacgaaagacctatttaa 3299562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 13480307 - 13480223
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| |||||||||||| ||    ||||||||||||||||||    
T  13480307 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaa 13480223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 577
Target Start/End: Original strand, 20994976 - 20995072
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| || ||||||||| || | || ||||||||| |||||| |||| ||||||    
T  20994976 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatgacttctatttgcagagacgaaagacctatttaa 20995072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 21880463 - 21880379
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    ||||||| ||| ||||||||||||||||||||||||||| || | |||||||| |||| |||||    
T  21880463 aatgattaatatttgcaggggcagattgaaaggattagtaacttcagagacgaaaattcaaatgacttatatttacaggaacgaa 21880379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 23292029 - 23292113
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||   | |||||||||| |||||||||||||| |||||||||||| || |  |||||||||| |||||||    
T  23292029 aatgattaatatttgcagggatagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcatggacgaa 23292113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 30234877 - 30234961
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| || ||||||||| | ||  ||||||||||||||||||    
T  30234877 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaacaacctatatttgcagggacgaa 30234961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 503 - 582
Target Start/End: Original strand, 15819797 - 15819876
Alignment:
Q  503 agattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacctt 582  Q
    |||||||||| |||||||||||||| |||||||||||| || |  |||||||||||||||||| |||  |||||| ||||    
T  15819797 agattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcctt 15819876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 5064434 - 5064350
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    || ||||| || |||||||||||||| |||||||||||| || | |||||||| ||||||||||    
T  5064434 aatgattaatatttgcaggggcaaattgggaggattagtaacttcagggacgaaaattcaaatgacttatatttacagggacgaa 5064350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 513 - 577
Target Start/End: Complemental strand, 5064595 - 5064531
Alignment:
Q  513 aattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    ||||||||||||||| |||||||||||| || || |||||||||||||| ||| |||| ||||||    
T  5064595 aattagtaacttcagggacgaaaattcaaatgatctatatttgcagggatgaaagacctatttaa 5064531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 502 - 582
Target Start/End: Original strand, 16704615 - 16704695
Alignment:
Q  502 cagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacctt 582  Q
    ||||||||||| |||||||||||||  |||||||||||| ||    |||||||||||||||||| |||| |||||| ||||    
T  16704615 cagattggaaggattagtaacttcaaggacgaaaattcaaatggcctatatttgcagggacgaaagacctatttaagcctt 16704695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 20994917 - 20994834
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    |||||| |||| ||||||||||||||||||||||||||| || |  ||||||| ||||||||||    
T  20994917 aatgattaatatttgcaggg-cagattagaaggattagtaacttcagagacgaaaattcaaatgaactatatttacagggacgaa 20994834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 577
Target Start/End: Original strand, 21880649 - 21880745
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||| ||||||||||||   | |||||||||| |||||||||||||| |||||||||||| ||    |||||||| ||||||||| |||| ||||||    
T  21880649 aatgcttaatatttgcagggatagattggaaggattagtaacttcagggacgaaaattcaaattgcatatatttggagggacgaaagacctatttaa 21880745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 468 - 580
Target Start/End: Complemental strand, 31879569 - 31879458
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 567  Q
    |||||||||||| ||| ||||||||||||| |  || | |||||  |||||||||||| | |||||||||||| || |   ||||||||||||||||| |    
T  31879569 ggaccatttttcaaattattaatatttgcaatggcaaaatggaaagattagtaacttcggggacgaaaattcaaatga-ccatatttgcagggacgaaag 31879471  T
Q  568 acccatttaaacc 580  Q
    ||| |||||||||    
T  31879470 acctatttaaacc 31879458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 502 - 565
Target Start/End: Original strand, 738003 - 738066
Alignment:
Q  502 cagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    ||||||||||| |||||||||||||  |||||||||||| || |  ||||||||||||||||||    
T  738003 cagattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaa 738066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 481 - 580
Target Start/End: Original strand, 5064620 - 5064719
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    ||||||||||| ||||||||| |||| |||||||||||| ||    ||||||||||| |||||| |||  |||||||||    
T  5064620 aatgattaatatttgcaggggcagattggaaggattagtaacctcagggacgaaaattcaaatggcctatatttgcagagacgaaagacatatttaaacc 5064719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 514 - 565
Target Start/End: Complemental strand, 21544584 - 21544533
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    ||||||||||||||||||||||||||| || |  ||||||||||||||||||    
T  21544584 attagtaacttcagagacgaaaattcaaatgacctatatttgcagggacgaa 21544533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 514 - 577
Target Start/End: Original strand, 32337689 - 32337752
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||| ||| |||| ||||||    
T  32337689 attagtaacttcagagacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 32337752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 468 - 578
Target Start/End: Complemental strand, 20774201 - 20774091
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 567  Q
    |||||||||||| ||||||||||||||||| | ||| | || ||| |||| ||||||||  |||||||||||| || |  |||||||| | ||| ||| |    
T  20774201 ggaccatttttcaaatgattaatatttgcaatgacaaaatgaaaggattaataacttcaaggacgaaaattcaaatgacatatatttgtaaggatgaaag 20774102  T
Q  568 acccatttaaa 578  Q
    ||| |||||||    
T  20774101 acctatttaaa 20774091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 554
Target Start/End: Original strand, 1066416 - 1066497
Alignment:
Q  473 atttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatattt 554  Q
    ||||||| ||||||||||||||||| |  || | |||||  |||||||||||||| |||||||||||| || || |||||||    
T  1066416 atttttcaaatgattaatatttgcaatggcaaaatggaaatattagtaacttcagggacgaaaattcaaatgatctatattt 1066497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 481 - 562
Target Start/End: Original strand, 22494165 - 22494246
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggac 562  Q
    ||||||| |||||||||    ||||||||||| |||||||||||||  |||||||||||| || |  |||||||||||||||    
T  22494165 aatgattgatatttgcaggggcagattggaaggattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggac 22494246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 481 - 570
Target Start/End: Original strand, 26542905 - 26542994
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacc 570  Q
    ||||||||||||||||  |  | ||||| ||  ||||||||||||||||||||||| ||| || |  |||||||||||||||||| ||||    
T  26542905 aatgattaatatttgcggtggccgattgaaattattagtaacttcagagacgaaaactcaaatgacctatatttgcagggacgaaagacc 26542994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 481 - 570
Target Start/End: Original strand, 31879743 - 31879832
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacc 570  Q
    |||||||||  |||||| |||||||||||||  |||||||||||||| || | ||||||| || |  |||||||| ||||||||| ||||    
T  31879743 aatgattaaattttgcagtaacagattggaattattagtaacttcagggatgcaaattcaaatgacctatatttgtagggacgaaagacc 31879832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 9607601 - 9607685
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    || ||| |||| |||||||||||||  |||||||||||| || |  ||||||||||||||||||    
T  9607601 aatgattaatatttgcaggggcatattagaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaa 9607685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 13480493 - 13480577
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    ||||||||||||||| |    ||||||||||| |||||||||||||| |||||||||||| || |  ||||||| || |||||||    
T  13480493 aatgattaatatttgtaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttacaaggacgaa 13480577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 248 - 339
Target Start/End: Original strand, 15484943 - 15485035
Alignment:
Q  248 gattagagtagatccacttgtactgatttatcacgatgtattttcgtttgagttttcctaggtcaggtcttatgtcccct-agtctttgtatc 339  Q
    ||||||||||||||||  |  ||||||||||||||||||||| || |||| ||||||||  ||||| |||  |||| ||| ||||||||||||    
T  15484943 gattagagtagatccatcttaactgatttatcacgatgtattctcatttgggttttcctgagtcagatctattgtctcctcagtctttgtatc 15485035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 23291843 - 23291759
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| || ||||||||| ||    |||||||| |||||||||    
T  23291843 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatggcctatatttgtagggacgaa 23291759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 577
Target Start/End: Original strand, 7612673 - 7612736
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||| | ||| |||||||||||| || | ||||||||||||||||||| |||| ||||||    
T  7612673 attagtaattccagggacgaaaattcaaatgacttatatttgcagggacgaaagacctatttaa 7612736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 561
Target Start/End: Original strand, 22494005 - 22494052
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcaggga 561  Q
    |||||||||||||| |||||||||||| ||||  ||||||||||||||    
T  22494005 attagtaacttcagggacgaaaattcaaataacctatatttgcaggga 22494052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 577
Target Start/End: Original strand, 23291869 - 23291932
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||| |||||||||||| || |  |||||||||||||| ||| |||| ||||||    
T  23291869 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 23291932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 577
Target Start/End: Original strand, 26542742 - 26542805
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||| |||||||||||| || || |||||||||||  ||||| |||| ||||||    
T  26542742 attagtaacttcagggacgaaaattcaaatgatctatatttgcagatacgaaagacctatttaa 26542805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 481 - 587
Target Start/End: Complemental strand, 20561027 - 20560921
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    ||||||| ||  |||| ||||| ||| |||||||||||| || |  |||||||||||||||||| |||  |||||| ||    
T  20561027 aatgattaatatttgcaggggcagattgaaatgattaataactacagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcc 20560928  T
Q  581 ttgattt 587  Q
    || ||||    
T  20560927 ttcattt 20560921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 481 - 559
Target Start/End: Original strand, 32337852 - 32337930
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagg 559  Q
    |||||||||||||||||    || |||||||| || ||||||||||| |||||||||||| || |  ||||||||||||    
T  32337852 aatgattaatatttgcaggggcatattggaaggatcagtaacttcagggacgaaaattcaaatgacctatatttgcagg 32337930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 577
Target Start/End: Complemental strand, 18865216 - 18865123
Alignment:
Q  484 gattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||| |  ||  ||||||| ||||||||||| | ||||||||||||| || | || |||||| |||||| || |||| ||||||    
T  18865216 gattaatatttgcagtggcaatttggaaggattagtaactttatagacgaaaattcaaatgacttgtatttgtagggactaaagacctatttaa 18865123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 540
Target Start/End: Complemental strand, 26542729 - 26542656
Alignment:
Q  468 ggaccatttttctaatgattaa-tatttgcactaacagattggaagaattagtaacttcagagacgaaaattca 540  Q
    |||| ||||||| ||||||||| |||||||| |  ||||||| ||  |||||||||||||| ||||||||||||    
T  26542729 ggacgatttttcaaatgattaaatatttgcagtggcagattgaaatgattagtaacttcagggacgaaaattca 26542656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 514 - 574
Target Start/End: Complemental strand, 737956 - 737896
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatt 574  Q
    ||||||||||||||  | ||||||||| || |  |||||||||||||||||| ||||||||    
T  737956 attagtaacttcaggaatgaaaattcaaatgacctatatttgcagggacgaaagacccatt 737896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 481 - 577
Target Start/End: Complemental strand, 3586310 - 3586215
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||  |||||| |  |||||| |||| ||||| ||||| ||||||||||||||| || |  |||||||||| ||||||| |||| ||||||    
T  3586310 aatgattaaattttgcagtggcagatttgaaggattagcaactttagagacgaaaattcaaatgacctatatttgca-ggacgaaagacctatttaa 3586215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 481 - 577
Target Start/End: Original strand, 7612834 - 7612930
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||  |||||| |  ||||||||||  ||| |||| ||||| |||||||||||| |||  |||||||| |||| ||||| |||| ||||||    
T  7612834 aatgattaaattttgcagtggcagattggaaagattggtaatttcagggacgaaaattcaaatagcttatatttacaggcacgaaagacctatttaa 7612930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 561
Target Start/End: Original strand, 13480332 - 13480380
Alignment:
Q  513 aattagtaacttcagagacgaaaattcagataatttatatttgcaggga 561  Q
    ||||||||||||||| |||||||||||| || |  ||||||||||||||    
T  13480332 aattagtaacttcagggacgaaaattcaaatgacctatatttgcaggga 13480380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 502 - 562
Target Start/End: Original strand, 16706957 - 16707017
Alignment:
Q  502 cagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggac 562  Q
    ||||||||||  |||||||||||||  |||||||||||| || |  |||||||||||||||    
T  16706957 cagattggaatgattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggac 16707017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 514 - 582
Target Start/End: Complemental strand, 19296486 - 19296418
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacctt 582  Q
    |||||||||||||  || ||||||||| || |  |||||||||||||||||  |||| |||||||||||    
T  19296486 attagtaacttcatggatgaaaattcaaatgacctatatttgcagggacgatagacctatttaaacctt 19296418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 581
Target Start/End: Original strand, 31393492 - 31393568
Alignment:
Q  505 attggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacct 581  Q
    ||||||||||||||||||||||   | ||||||| | ||||  ||| |||||||||||||| |||| ||| ||||||    
T  31393492 attggaagaattagtaacttcatgaatgaaaattgaaataagctatgtttgcagggacgaaagacctattcaaacct 31393568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 5e-24; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 468 - 577
Target Start/End: Original strand, 22309703 - 22309812
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 567  Q
    |||||||||||| ||||||||||||||||| |  |||||||||| ||||||||||||||| |||||||||||| || |  |||||||||||||| ||| |    
T  22309703 ggaccatttttcaaatgattaatatttgcagtgtcagattggaacaattagtaacttcagggacgaaaattcaaatgacctatatttgcagggaagaaag 22309802  T
Q  568 acccatttaa 577  Q
    ||| ||||||    
T  22309803 acctatttaa 22309812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 468 - 577
Target Start/End: Original strand, 9694014 - 9694123
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 567  Q
    |||||||||||| ||||||||||||||||| | ||| | |||||| |||||||||||||| |||||||||||| || |  |||||||||| ||||||| |    
T  9694014 ggaccatttttcaaatgattaatatttgcaatgacaaaatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcatggacgaaag 9694113  T
Q  568 acccatttaa 577  Q
    ||| ||||||    
T  9694114 acctatttaa 9694123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 468 - 581
Target Start/End: Complemental strand, 28599539 - 28599426
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 567  Q
    |||||||||||| ||||||||||||||||| |  || | |||||| |||||||||||||  |||||||||||| || || |||||||||| ||||||| |    
T  28599539 ggaccatttttcaaatgattaatatttgcaatggcaaaatggaaggattagtaacttcatggacgaaaattcaaatgatctatatttgcaaggacgaaag 28599440  T
Q  568 acccatttaaacct 581  Q
    ||| ||||||||||    
T  28599439 acctatttaaacct 28599426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 481 - 587
Target Start/End: Complemental strand, 19607016 - 19606910
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||   |||||||||||| |||||||||||||| |||||||||||| || |  ||||||| |||||||||| |||  ||||||||     
T  19607016 aatgattaatatttgcaacgacagattggaaggattagtaacttcagggacgaaaattcaaatgacatatatttacagggacgaaagacatatttaaact 19606917  T
Q  581 ttgattt 587  Q
    |||||||    
T  19606916 ttgattt 19606910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 481 - 582
Target Start/End: Complemental strand, 20911229 - 20911128
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| |||||||||||| || |  |||||||||||||||||| |||| |||||| ||    
T  20911229 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcc 20911130  T
Q  581 tt 582  Q
    ||    
T  20911129 tt 20911128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 481 - 587
Target Start/End: Original strand, 32519440 - 32519546
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    ||||||| ||| ||||||||||||||  ||||||||||| || | ||||||||||||||||||| |||  |||||| ||    
T  32519440 aatgattaatatttgcaggggcagattgaaaggattagtaacttcaggaacgaaaattcaaatgacttatatttgcagggacgaaagacatatttaagcc 32519539  T
Q  581 ttgattt 587  Q
    || ||||    
T  32519540 tttattt 32519546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 582
Target Start/End: Complemental strand, 1150036 - 1149935
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    | ||||||||| |||||||||||||| |||||||||||| || |  ||||||||||||||||||  ||| |||||| ||    
T  1150036 aatgattaatatttgcaggggccgattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaatacctatttaagcc 1149937  T
Q  581 tt 582  Q
    ||    
T  1149936 tt 1149935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 582
Target Start/End: Complemental strand, 16367062 - 16366961
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| |||||||||||| || |  ||||||| |||||||||| |||  |||||| ||    
T  16367062 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaagacatatttaagcc 16366963  T
Q  581 tt 582  Q
    ||    
T  16366962 tt 16366961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 582
Target Start/End: Complemental strand, 22309530 - 22309429
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||| |||| |  ||||||||||| |||||||||||||  ||| |||||||| || |  |||||||||||||||||| |||| |||||| ||    
T  22309530 aatgattaatatgtgcagtggcagattggaaggattagtaacttcattgactaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcc 22309431  T
Q  581 tt 582  Q
    ||    
T  22309430 tt 22309429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 468 - 561
Target Start/End: Complemental strand, 37984839 - 37984746
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcaggga 561  Q
    |||||||||||| ||| |||||||||| || |  || | |||||||||||||||||| | ||||||||||||| || || ||||||||||||||    
T  37984839 ggaccatttttcaaataattaatatttacaatggcaaaatggaagaattagtaactttatagacgaaaattcaaatgatatatatttgcaggga 37984746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 581
Target Start/End: Complemental strand, 8089551 - 8089451
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    ||||||| |||||||||    ||||||||||| ||||||||||||| ||||||||||||| || |  ||||||||||| ||||||  ||| |||||||||    
T  8089551 aatgattgatatttgcaggggcagattggaaggattagtaacttcaaagacgaaaattcaaatgacatatatttgcagagacgaaaaacctatttaaacc 8089452  T
Q  581 t 581  Q
    |    
T  8089451 t 8089451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 10446931 - 10446847
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| |||||||||||| ||    ||||||||||||||||||    
T  10446931 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaa 10446847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 577
Target Start/End: Original strand, 28599712 - 28599808
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||  |||||| |  ||||||||||| ||| ||||||||||||||||||||||| || | |||||||| |||||| ||| |||| ||||||    
T  28599712 aatgattaaattttgcaatggcagattggaaggatttgtaacttcagagacgaaaattcaaatgacttatatttacagggatgaaagacctatttaa 28599808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 32519254 - 32519170
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||  | || |||||||| |||||||| ||||| |||||||||||| || |  ||||||||||||||||||    
T  32519254 aatgattaatatttgcaggagcatattggaaggattagtaatttcagggacgaaaattcaaatgacctatatttgcagggacgaa 32519170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 468 - 570
Target Start/End: Original strand, 5608866 - 5608968
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 567  Q
    |||||||||||| ||||||||||||||||| |  || | || ||| ||||||||||| ||||| ||||||||| || || ||||||||| || ||||| |    
T  5608866 ggaccatttttcaaatgattaatatttgcaatggcaaaatgaaaggattagtaactttagagaggaaaattcaaatgatctatatttgctggaacgaaag 5608965  T
Q  568 acc 570  Q
    |||    
T  5608966 acc 5608968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 483 - 565
Target Start/End: Complemental strand, 9958922 - 9958840
Alignment:
Q  483 tgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    ||||||||||||||| |  | ||||||||| ||||| |||||||  |||||||||||| || || ||||||||||||||||||    
T  9958922 tgattaatatttgcagtggctgattggaagcattagcaacttcattgacgaaaattcaaatgatctatatttgcagggacgaa 9958840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 579
Target Start/End: Original strand, 9959098 - 9959208
Alignment:
Q  469 gaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatga 568  Q
    ||||||||||| ||||||||||||||| | |  ||||||| ||| |||||||||||||  ||| |||||||| || |   ||||||||||||||||| ||    
T  9959098 gaccatttttcaaatgattaatatttgtagtggcagattgaaaggattagtaacttcatggaccaaaattcaaatgaccaatatttgcagggacgaaaga 9959197  T
Q  569 cccatttaaac 579  Q
    |  ||||||||    
T  9959198 cttatttaaac 9959208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 468 - 577
Target Start/End: Complemental strand, 17366738 - 17366629
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 567  Q
    |||||||||||  ||||||||||||||||| |  ||||||||||| |||| ||| ||||| || ||||||||| || |  |||||||||| ||| ||| |    
T  17366738 ggaccattttttaaatgattaatatttgcagtggcagattggaaggattattaaattcagggaagaaaattcaaatgacctatatttgcatggatgaaag 17366639  T
Q  568 acccatttaa 577  Q
    ||| ||||||    
T  17366638 acctatttaa 17366629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 582
Target Start/End: Complemental strand, 18477006 - 18476905
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||  |||||| |  ||||||||||| |||||||||||||| ||| |||||||| || |  |||| ||||||||||||| | || |||||||||    
T  18477006 aatgattaaattttgcagtggcagattggaaggattagtaacttcagggacaaaaattcaaatgacctatagttgcagggacgaaaggcctatttaaacc 18476907  T
Q  581 tt 582  Q
    ||    
T  18476906 tt 18476905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 16367248 - 16367332
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    || |||||||| |||||||||||||| |||||||||||| ||    ||||||||||||||||||    
T  16367248 aatgattaatatttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaa 16367332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 41846491 - 41846407
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    ||||||||||||||||| |  |||||| |||| |||| ||||||||| |||||||||||| || |  |||||||| |||||||||    
T  41846491 aatgattaatatttgcagtggcagattagaaggattactaacttcagggacgaaaattcaaatgacctatatttgtagggacgaa 41846407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 472 - 540
Target Start/End: Original strand, 41846668 - 41846736
Alignment:
Q  472 catttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattca 540  Q
    |||||||| ||||||||||||||||| |  ||||||||||| | ||||||||||||  |||||||||||    
T  41846668 catttttcaaatgattaatatttgcagtggcagattggaaggagtagtaacttcaggaacgaaaattca 41846736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 507 - 582
Target Start/End: Complemental strand, 17284816 - 17284741
Alignment:
Q  507 tggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacctt 582  Q
    |||||| ||||||||||||||| ||||||||||| || |  ||||||||||||||||||  ||| |||||| ||||    
T  17284816 tggaaggattagtaacttcagatacgaaaattcaaatgacctatatttgcagggacgaaaaacctatttaagcctt 17284741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 481 - 583
Target Start/End: Original strand, 22731817 - 22731919
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||   |||||||| ||| | |||||||||||  |||||||||||| ||    |||||||||||||||||| |||  |||||| ||    
T  22731817 aatgattaatatttgcagggacagattgaaaggaatagtaacttcacggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagcc 22731916  T
Q  581 ttg 583  Q
    |||    
T  22731917 ttg 22731919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 481 - 582
Target Start/End: Original strand, 1150222 - 1150323
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    ||||||| ||| |||||||| ||||| |||||||||||| || |  |||||||||||| ||||| |||  |||||| ||    
T  1150222 aatgattaatatttgcaggggcagattgaaaggattagtaatttcagggacgaaaattcaaatgacctatatttgcaggcacgaaagacatatttaagcc 1150321  T
Q  581 tt 582  Q
    ||    
T  1150322 tt 1150323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 514 - 579
Target Start/End: Original strand, 17580453 - 17580518
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaac 579  Q
    |||||||||||||| |||||||||||| || || |||||||||| ||| ||| |||| ||||||||    
T  17580453 attagtaacttcagggacgaaaattcaaatgatctatatttgcaaggatgaaagacctatttaaac 17580518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 577
Target Start/End: Original strand, 4375836 - 4375932
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||  |||||| |  ||||||||||| |||||||||||||  |||||||||| | || |  |||||||||| ||||||| |||| ||||||    
T  4375836 aatgattaaattttgcagtggcagattggaaggattagtaacttcatggacgaaaatttaaatgacatatatttgcatggacgaaagacctatttaa 4375932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 577
Target Start/End: Complemental strand, 17580427 - 17580331
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||||||    || |||||||| |||| ||||||| | |||||||||||| ||| | ||||||| ||| |||||| |||| ||||||    
T  17580427 aatgattaatatttgcaggggcaaattggaaggattaataacttcggggacgaaaattcaaatagtctatatttacagagacgaaagacctatttaa 17580331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 20911415 - 20911498
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||  | ||||||||||  |||||||||||||| ||| |||||||| || |  ||||||| ||||||||||    
T  20911415 aatgattaatatttgcagga-cagattggaatgattagtaacttcagggacaaaaattcaaatgacctatatttacagggacgaa 20911498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 289
Target Start/End: Complemental strand, 22193559 - 22193519
Alignment:
Q  249 attagagtagatccacttgtactgatttatcacgatgtatt 289  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  22193559 attagagtagatccacttggactgatttatcacggtgtatt 22193519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 565
Target Start/End: Original strand, 37985036 - 37985096
Alignment:
Q  505 attggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||| |||||||| |||||||||||||| ||| || |  ||||||||||||||||||    
T  37985036 attggaaggattagtaatttcagagacgaaaaatcaaatgacatatatttgcagggacgaa 37985096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 45663793 - 45663877
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    |||||| |||| |||||||||||||| |||||||||||| ||    ||||||| ||||||||||    
T  45663793 aatgattaatatttgcagggccagatttgaaggattagtaacttcagggacgaaaattcaaattgactatatttacagggacgaa 45663877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 577
Target Start/End: Complemental strand, 5608853 - 5608790
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    ||||||||||||| | ||||||||| | || | ||||||||||||||||||| |||| ||||||    
T  5608853 attagtaacttcataaacgaaaattaaaatgacttatatttgcagggacgaaagacctatttaa 5608790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 538
Target Start/End: Original strand, 17366909 - 17366964
Alignment:
Q  483 tgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaatt 538  Q
    ||||||||||||||| |  ||||||||||| ||||||||||| || ||||||||||    
T  17366909 tgattaatatttgcagtggcagattggaaggattagtaactttagggacgaaaatt 17366964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 577
Target Start/End: Original strand, 32519280 - 32519343
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||| |||||||||||| || |  |||||||||||||| ||| |||| ||||||    
T  32519280 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 32519343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 565
Target Start/End: Complemental strand, 41846651 - 41846600
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||| |||||||||||| || |  ||||||||||||||||||    
T  41846651 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaa 41846600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 538
Target Start/End: Complemental strand, 9693841 - 9693784
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaatt 538  Q
    |||||||||  |||||| |  ||||||||||| |||||||||||||| ||||||||||    
T  9693841 aatgattaaactttgcagtggcagattggaaggattagtaacttcagtgacgaaaatt 9693784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 582
Target Start/End: Complemental strand, 43681955 - 43681854
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    ||||||||||||||||| |  || | |||||  ||||||||||| |  |||||||||||| || |  |||||||||||||||||| |||  |||||| ||    
T  43681955 aatgattaatatttgcaatggcaaaatggaatgattagtaactttatggacgaaaattcaaatgacatatatttgcagggacgaaagacatatttaagcc 43681856  T
Q  581 tt 582  Q
    ||    
T  43681855 tt 43681854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 577
Target Start/End: Original strand, 28599551 - 28599615
Alignment:
Q  513 aattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    ||||||||| ||||| |||||||||||| ||  | ||||||||||||| |||| |||| ||||||    
T  28599551 aattagtaatttcagggacgaaaattcaaatggtctatatttgcaggggcgaaagacctatttaa 28599615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 3e-22; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 468 - 582
Target Start/End: Complemental strand, 48380793 - 48380679
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 567  Q
    |||||||||||| |||||||||| ||||||||  ||||||||||| |||||||||||||| |||||||||||| || |  ||||||| || ||||||| |    
T  48380793 ggaccatttttcaaatgattaatttttgcactggcagattggaaggattagtaacttcagcgacgaaaattcaaatgacctatatttacaaggacgaaag 48380694  T
Q  568 acccatttaaacctt 582  Q
    ||| |||||| ||||    
T  48380693 acctatttaagcctt 48380679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 472 - 577
Target Start/End: Complemental strand, 33030442 - 33030337
Alignment:
Q  472 catttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgaccc 571  Q
    |||||||| ||||||| ||||||||| |  |||||||||||||||||||||||||| |||||||||||| || |  ||||||||||||||| || ||||     
T  33030442 catttttcaaatgattcatatttgcagtggcagattggaagaattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacaaaagacct 33030343  T
Q  572 atttaa 577  Q
    ||||||    
T  33030342 atttaa 33030337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 250 - 339
Target Start/End: Complemental strand, 18650225 - 18650135
Alignment:
Q  250 ttagagtagatccacttgtactgatttatcacgatgtattttcgtttgagttttcctaggtcaggtcttatgt-cccctagtctttgtatc 339  Q
    ||||||| |||||||||| |||||||| ||||||||||||| ||||||||||||||  ||||||||| ||||| |||| ||||||||||||    
T  18650225 ttagagtggatccacttggactgatttttcacgatgtatttccgtttgagttttcccgggtcaggtcctatgtccccccagtctttgtatc 18650135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 26953386 - 26953470
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||  | ||||||||||||||||||||||||||  | ||||||||| ||  ||||||||||||||||||||    
T  26953386 aatgattaatatttgcaagagcagattggaagaattagtaacttcaggaatgaaaattcaaatggtttatatttgcagggacgaa 26953470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 481 - 583
Target Start/End: Complemental strand, 33347515 - 33347413
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    ||||||||||||||| |    |||||||||||||||||||||||||| ||||||| |||| || | ||||||||||||||||||| |||  |||||| ||    
T  33347515 aatgattaatatttgtaggggcagattggaagaattagtaacttcagggacgaaagttcaaatgacttatatttgcagggacgaaagacatatttaagcc 33347416  T
Q  581 ttg 583  Q
    |||    
T  33347415 ttg 33347413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 481 - 582
Target Start/End: Original strand, 49003160 - 49003261
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    ||||||||||| |||||||||||||  |||||||||||| || |  |||||||||||||||||| |||| |||||| ||    
T  49003160 aatgattaatatttgcagaggcagattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcc 49003259  T
Q  581 tt 582  Q
    ||    
T  49003260 tt 49003261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 2953749 - 2953833
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| |||||||||||| || |  ||||||||||||||||||    
T  2953749 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaa 2953833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 25415129 - 25415213
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||| ||||||||||||  |||| |||||||| ||||||||||||||  ||||||||||| || | |||||||||||||||||||    
T  25415129 aatggttaatatttgcaggaacatattggaaggattagtaacttcaggaacgaaaattcaaatgacttatatttgcagggacgaa 25415213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 248 - 339
Target Start/End: Original strand, 26759635 - 26759725
Alignment:
Q  248 gattagagtagatccacttgtactgatttatcacgatgtattttcgtttgagtt-ttcctaggtcaggtcttatgtcccctagtctttgtatc 339  Q
    |||||||||||||||| ||| |||||||||||||||||||||||| |||| ||| |||||| ||||||| | |||||||| ||||||||||||    
T  26759635 gattagagtagatcca-ttggactgatttatcacgatgtattttcatttgggttattcctaagtcaggtttaatgtcccc-agtctttgtatc 26759725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 37152823 - 37152907
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    ||||||||||| ||||||||||||||||||||||||||| ||    ||||||||||||||||||    
T  37152823 aatgattaatatttgcaggggcagattggaaggattagtaacttcagagacgaaaattcaaatggactatatttgcagggacgaa 37152907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 481 - 583
Target Start/End: Original strand, 1047489 - 1047591
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    ||||||||||| ||||||||||||||||||||||||||| || |  ||||||| |||||| ||| |||  |||||| ||    
T  1047489 aatgattaatatttgcaggggcagattggaaggattagtaacttcagagacgaaaattcaaatgacctatatttacagggatgaaagacatatttaagcc 1047588  T
Q  581 ttg 583  Q
    |||    
T  1047589 ttg 1047591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 472 - 582
Target Start/End: Original strand, 8890485 - 8890595
Alignment:
Q  472 catttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgaccc 571  Q
    |||||||| ||||||||||||||||| | ||| |||||||  |||||| ||||||  |||||| ||||| || |  |||||||||||||||||| ||||     
T  8890485 catttttcaaatgattaatatttgcagtgacatattggaatgattagtcacttcatggacgaatattcaaatgacctatatttgcagggacgaaagacct 8890584  T
Q  572 atttaaacctt 582  Q
    |||||| ||||    
T  8890585 atttaagcctt 8890595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 468 - 582
Target Start/End: Original strand, 24701541 - 24701655
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 567  Q
    |||||||||||| |||| |||||||||| | |  || | |||||| |||||||||||||| |||||||||||| ||   ||||||||||||||| ||| |    
T  24701541 ggaccatttttcaaatggttaatatttgtaatggcaaaatggaaggattagtaacttcagggacgaaaattcaaatggcttatatttgcagggatgaaag 24701640  T
Q  568 acccatttaaacctt 582  Q
    ||| |||||| ||||    
T  24701641 acctatttaagcctt 24701655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 570
Target Start/End: Original strand, 33347701 - 33347790
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacc 570  Q
    |||||||||||||||||    ||||||||||| |||||||||||||  |||||||||||| || |  |||||||||||||||||| ||||    
T  33347701 aatgattaatatttgcaagggcagattggaaggattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaagacc 33347790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 582
Target Start/End: Complemental strand, 35312073 - 35311972
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||  |||||| | |||||||||||  |||||||||||||| |||||||||||| || |  |||||||  ||||||||| |||| |||||||||    
T  35312073 aatgattaaattttgcaatgacagattggaatgattagtaacttcagtgacgaaaattcaaatgacctatatttatagggacgaaagacctatttaaacc 35311974  T
Q  581 tt 582  Q
    ||    
T  35311973 tt 35311972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 469 - 582
Target Start/End: Original strand, 35312249 - 35312362
Alignment:
Q  469 gaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatga 568  Q
    ||||||||||| ||||||||||||||||| | ||| | |||||| |||||||||| ||  |||||||||||| ||||  ||||||| |||| ||||| ||    
T  35312249 gaccatttttcaaatgattaatatttgcaatgacaaaatggaaggattagtaactccaaggacgaaaattcaaataagatatatttacaggaacgaaaga 35312348  T
Q  569 cccatttaaacctt 582  Q
    |  |||||| ||||    
T  35312349 cttatttaagcctt 35312362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 578
Target Start/End: Complemental strand, 49002975 - 49002878
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaa 578  Q
    |||||||||||||||||    ||||||||||| |||||||||||||  |||||||||||| || |  |||||||||||||||||| |||  |||||||    
T  49002975 aatgattaatatttgcaggggcagattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaaa 49002878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 577
Target Start/End: Original strand, 12577297 - 12577393
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||||||    ||||||| ||| |||||||||||||  |||||||||| | || | ||||||||||||||||||| |||| ||||||    
T  12577297 aatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaatttaaatgacttatatttgcagggacgaaagacctatttaa 12577393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 577
Target Start/End: Original strand, 19755690 - 19755786
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| ||  |||||||| || |  |||||||||||||||||| |||| ||||||    
T  19755690 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggataaaaattcaaatgacctatatttgcagggacgaaagacctatttaa 19755786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 26953200 - 26953116
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    ||||||| ||| |||||||||||||| |||||||||||| ||| | |||||||||| |||||||    
T  26953200 aatgattaatatttgcaggggcagattgaaaggattagtaacttcagggacgaaaattcaaatagtctatatttgcaaggacgaa 26953116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 577
Target Start/End: Original strand, 46849943 - 46850039
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||||||    || |||||||| || ||||||||||| |||||||||||| || |  |||||||||||||||||| |||| ||||||    
T  46849943 aatgattaatatttgcaggggcaaattggaaggatcagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaa 46850039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 582
Target Start/End: Complemental strand, 739318 - 739217
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    || |||||||| |||||||||||||  |||||||||||| ||  | ||||||||||||||||||  ||| |||||| ||    
T  739318 aatgattaatatttgcaggggcatattggaaggattagtaacttcaaggacgaaaattcaaatggtctatatttgcagggacgaaaaacctatttaagcc 739219  T
Q  581 tt 582  Q
    ||    
T  739218 tt 739217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 582
Target Start/End: Complemental strand, 24701369 - 24701268
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||  |||||| |  ||||||||||| |||||||||||||| |||||||||||| || |  ||||||||||| |||||| |||  |||||| ||    
T  24701369 aatgattaaattttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatgagctatatttgcagagacgaaagacttatttaagcc 24701270  T
Q  581 tt 582  Q
    ||    
T  24701269 tt 24701268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 514 - 579
Target Start/End: Complemental strand, 26953360 - 26953295
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaac 579  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||| ||| |||| ||||||||    
T  26953360 attagtaacttcagagacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaaac 26953295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 562
Target Start/End: Original strand, 52455028 - 52455121
Alignment:
Q  469 gaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggac 562  Q
    ||||||||||| ||||||||||| ||||| |  ||||||||||| |||| |||||| |  |||||||||| | |||| ||||||||||| ||||    
T  52455028 gaccatttttcaaatgattaatagttgcagtggcagattggaaggattaataactttatggacgaaaatttaaataacttatatttgcatggac 52455121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 1040397 - 1040313
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| ||| |||||||| ||   ||||||||||| |||||||    
T  1040397 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacaaaaattcaaatggcttatatttgcaaggacgaa 1040313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 1047303 - 1047219
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| ||| |||||||| ||   ||||||||||| |||||||    
T  1047303 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacaaaaattcaaatggcttatatttgcaaggacgaa 1047219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 565
Target Start/End: Complemental strand, 5926594 - 5926534
Alignment:
Q  505 attggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||| |||||||||||||| |||||||||||| || |  ||||||||||||||||||    
T  5926594 attggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaa 5926534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 577
Target Start/End: Original strand, 5926806 - 5926902
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||| ||||||||    ||||||||| | |||||||||||||| || ||||||||| ||  | |||||||||||||||||| |||| ||||||    
T  5926806 aatgattactatttgcagaggcagattggacggattagtaacttcagggatgaaaattcaaatggtctatatttgcagggacgaaagacctatttaa 5926902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 25414943 - 25414859
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    ||||||||||| ||||||||||||||||| ||||||||| ||    |||||||| |||||||||    
T  25414943 aatgattaatatttgcaggggcagattggaaggattagtaacttcagagaagaaaattcaaatggcctatatttgtagggacgaa 25414859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 33030620 - 33030704
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    ||||||||||||||||| |  ||||||| ||| |||||||| ||||  |||||||||||| || || |||||||||||| |||||    
T  33030620 aatgattaatatttgcagtggcagattgaaaggattagtaatttcatggacgaaaattcaaatgatctatatttgcaggaacgaa 33030704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 37152637 - 37152553
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||| |||||||||   ||||||||||| |||||||||||||  |||||||||||| || |  |||||||| |||||||||    
T  37152637 aatgattagtatttgcacgggcagattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgtagggacgaa 37152553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 469 - 540
Target Start/End: Original strand, 10019646 - 10019717
Alignment:
Q  469 gaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattca 540  Q
    ||||||||||| ||||||||||||||||| |  || | |||||| |||||||||||||| || |||||||||    
T  10019646 gaccatttttcaaatgattaatatttgcaatggcaaaatggaaggattagtaacttcagggatgaaaattca 10019717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 252 - 327
Target Start/End: Complemental strand, 18628748 - 18628673
Alignment:
Q  252 agagtagatccacttgtactgatttatcacgatgtattttcgtttgagttttcctaggtcaggtcttatgtcccct 327  Q
    |||||||||||||||   || ||| |||||||| ||||  |||||| |||||||| ||||||||||||||||||||    
T  18628748 agagtagatccacttaggcttattcatcacgatatattcccgtttgggttttcctgggtcaggtcttatgtcccct 18628673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 514 - 565
Target Start/End: Original strand, 33030459 - 33030510
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    ||||||||||||||| ||||||||||| || || ||||||||||||||||||    
T  33030459 attagtaacttcagaaacgaaaattcaaatgatctatatttgcagggacgaa 33030510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 503 - 565
Target Start/End: Original strand, 49990103 - 49990165
Alignment:
Q  503 agattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    ||||| |||| |||| |||||||| ||||||||||||| ||| | ||||||||||||||||||    
T  49990103 agatttgaaggattaataacttcaaagacgaaaattcaaatagtctatatttgcagggacgaa 49990165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 481 - 582
Target Start/End: Complemental strand, 6056475 - 6056374
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||   ||| |||||||| || ||||| || || |||||||||||| || |  |||||||||||||||||| |||  |||||| ||    
T  6056475 aatgattaatatttgcagggacatattggaaggatcagtaattttagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcc 6056376  T
Q  581 tt 582  Q
    ||    
T  6056375 tt 6056374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 248 - 297
Target Start/End: Complemental strand, 26924902 - 26924854
Alignment:
Q  248 gattagagtagatccacttgtactgatttatcacgatgtattttcgtttg 297  Q
    |||||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  26924902 gattagagtagatcca-ttggactgatttatcacgatgtattttcatttg 26924854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 481 - 570
Target Start/End: Original strand, 46364860 - 46364949
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacc 570  Q
    |||||||||||||||||    || |||| ||| |||||||| ||||  |||||||||||| |||| |||||||||||||| |||| ||||    
T  46364860 aatgattaatatttgcaggggcatattgaaaggattagtaatttcaaggacgaaaattcaaataacttatatttgcaggggcgaaagacc 46364949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 468 - 561
Target Start/End: Original strand, 46545003 - 46545096
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcaggga 561  Q
    |||| ||||||| ||||||||||||||||| |  || | |||||| |||||||||||||| ||||||| |||| || |  ||||||| ||||||    
T  46545003 ggactatttttcaaatgattaatatttgcagtggcaaaatggaaggattagtaacttcagggacgaaacttcaaatgacctatatttacaggga 46545096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 739503 - 739587
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||   |||||||| ||| |||||||||||||   ||||||||||| || |  ||||||||||| ||||||    
T  739503 aatgattaatatttgcagggacagattgaaaggattagtaacttcatgtacgaaaattcaaatgacctatatttgcagagacgaa 739587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 2953563 - 2953479
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    ||||||| ||| ||||||||||| || |||||||||||| || |  ||||||| ||||||||||    
T  2953563 aatgattaatatttgcaggggcagattgaaaggattagtaactttagggacgaaaattcaaatgacctatatttacagggacgaa 2953479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 29043040 - 29043124
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    ||||||| ||| |||||||||||||| |||||||||||| ||    ||||||||||| ||||||    
T  29043040 aatgattaatatttgcaggggcagattgaaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagagacgaa 29043124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 577
Target Start/End: Original strand, 29980923 - 29981019
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||||||    || |||||||| |||||||||||| | |||||||||||| || |  ||||||||||  |||||| |||| ||||||    
T  29980923 aatgattaatatttgcaggggcaaattggaaggattagtaacttccgggacgaaaattcaaatgacctatatttgcaaagacgaaagacctatttaa 29981019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 520 - 580
Target Start/End: Complemental strand, 34176176 - 34176116
Alignment:
Q  520 aacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||  |||||||||||| || | ||||||||||||||||||| |||| |||||||||    
T  34176176 aacttcaaggacgaaaattcaaatgacttatatttgcagggacgaaagacctatttaaacc 34176116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 46364673 - 46364589
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    ||||||||||||||| |   |||||| | ||  |||||||||||||| |||||||||||| || |  ||||||||||||||||||    
T  46364673 aatgattaatatttgtagggacagatggaaaagattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaa 46364589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 565
Target Start/End: Complemental strand, 10019632 - 10019581
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    ||||| |||||||| |||||||||||| || | |||||||||||||||||||    
T  10019632 attagcaacttcagggacgaaaattcaaatgacttatatttgcagggacgaa 10019581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 577
Target Start/End: Complemental strand, 25415103 - 25415040
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    ||||||||||||||||||||||||||| || |  |||||||||| ||| ||| |||| ||||||    
T  25415103 attagtaacttcagagacgaaaattcaaatgacctatatttgcatggatgaaagacctatttaa 25415040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 565
Target Start/End: Complemental strand, 30830390 - 30830339
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    ||||||||||| || |||||||||||| || | |||||||||||||||||||    
T  30830390 attagtaactttagggacgaaaattcaaatgacttatatttgcagggacgaa 30830339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 577
Target Start/End: Complemental strand, 46364834 - 46364771
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||| |||||||||||| || |  |||||||||||||| ||| |||| ||||||    
T  46364834 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 46364771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 580
Target Start/End: Complemental strand, 35312235 - 35312169
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||  ||| |||||||| ||  | |||||||||||||||||| |||| |||||||||    
T  35312235 attagtaacttcatcgacaaaaattcaaatggtctatatttgcagggacgaaagacctatttaaacc 35312169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 502 - 564
Target Start/End: Complemental strand, 46849736 - 46849674
Alignment:
Q  502 cagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacga 564  Q
    ||||||| |||||||| ||||||||| |||||||||||| || |  ||||||| |||||||||    
T  46849736 cagattgaaagaattaataacttcagggacgaaaattcaaatgacctatatttacagggacga 46849674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 562
Target Start/End: Original strand, 5183791 - 5183872
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggac 562  Q
    |||||||||||||||||    || |||||||| ||| |||||||||| |||||||||||| ||    |||||||||||||||    
T  5183791 aatgattaatatttgcaggggcaaattggaaggattcgtaacttcagggacgaaaattcaaatggcctatatttgcagggac 5183872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 6056663 - 6056748
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaactt-cagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    ||||||| ||| ||||||||||| ||| || ||||||||| ||   |||||||||||||||||||    
T  6056663 aatgattaatatttgcaggggcagattgaaaggattagtaacttacagggatgaaaattcaaatggcttatatttgcagggacgaa 6056748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 582
Target Start/End: Complemental strand, 12577109 - 12577008
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    ||||||| ||  ||||||||||||| ||||||||||||| ||    ||||||| |||||||||| |||  |||||| ||    
T  12577109 aatgattaatatttgcaggggcagattgaaatgattagtaacttcatagacgaaaattcaaatggcctatatttacagggacgaaagacatatttaagcc 12577010  T
Q  581 tt 582  Q
    ||    
T  12577009 tt 12577008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 516 - 577
Target Start/End: Complemental strand, 33347673 - 33347612
Alignment:
Q  516 tagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||| |||||||||||| || |  |||||||||||||| ||| |||| ||||||    
T  33347673 tagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 33347612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 5183605 - 5183521
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    ||||||||||| ||||||||||| |  |||||||||||| || |  ||||||| |||| |||||    
T  5183605 aatgattaatatttgcaggggcagattggaaggattagtaactttatggacgaaaattcaaatgacctatattttcaggaacgaa 5183521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 481 - 561
Target Start/End: Complemental strand, 6334755 - 6334675
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcaggga 561  Q
    ||||||||||||||||| |  ||||| ||||| ||||||||||| |   ||||||||||| ||  | ||||||||||||||    
T  6334755 aatgattaatatttgcagtggcagatcggaaggattagtaactttaacaacgaaaattcaaatggtctatatttgcaggga 6334675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 8890310 - 8890227
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    ||||||||||||||| | |  ||||||||||  |||||||||||||| ||| || ||||| || |  ||||||||||||||||||    
T  8890310 aatgattaatatttggagtggcagattggaaagattagtaacttcagggac-aatattcaaatgacctatatttgcagggacgaa 8890227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 514 - 570
Target Start/End: Complemental strand, 12577271 - 12577215
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacc 570  Q
    |||||||||||||| |||||||||||| || |  |||||||||||||| ||| ||||    
T  12577271 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacc 12577215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 48380968 - 48381052
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    ||||||||||| |||| |||||| |  |||||||||| | || | |||||||| ||||||||||    
T  48380968 aatgattaatatttgcagcggcagattggaaggattaataactttaaggacgaaaatttaaatgaattatatttacagggacgaa 48381052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 1e-21; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 468 - 577
Target Start/End: Original strand, 40422432 - 40422541
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 567  Q
    |||||||||||| ||||||||||||||||| |  |||||| |||| |||||||||||||| |||||||||||| || |  |||||||||||||| ||| |    
T  40422432 ggaccatttttcaaatgattaatatttgcagtggcagatttgaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaag 40422531  T
Q  568 acccatttaa 577  Q
    ||| ||||||    
T  40422532 acctatttaa 40422541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 481 - 577
Target Start/End: Complemental strand, 40422259 - 40422163
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    ||||||||||||||||| |  ||||||||||| |||||| |||||||||||||||||||| || |  |||||||||||||||||| |||| ||||||    
T  40422259 aatgattaatatttgcagtggcagattggaaggattagttacttcagagacgaaaattcatatgacctatatttgcagggacgaaagacctatttaa 40422163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 481 - 579
Target Start/End: Original strand, 22763881 - 22763979
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaac 579  Q
    |||||||||||||| || | |||||||||||| ||||||||||||||||||||||||||| ||  ||||||  |||||||||||| || | ||||||||    
T  22763881 aatgattaatatttacaatgacagattggaaggattagtaacttcagagacgaaaattcaaatggtttatagctgcagggacgaaagatctatttaaac 22763979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 468 - 582
Target Start/End: Complemental strand, 37713808 - 37713694
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 567  Q
    |||||||||||| ||||||||||||||||| |   |||||| |||||||| ||||||||  |||||||||||| || | ||||||||  ||||||||| |    
T  37713808 ggaccatttttcaaatgattaatatttgcaatggtagattgaaagaattaataacttcatggacgaaaattcaaatgacttatatttatagggacgaaag 37713709  T
Q  568 acccatttaaacctt 582  Q
    ||| |||||||||||    
T  37713708 acctatttaaacctt 37713694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 481 - 582
Target Start/End: Original strand, 29190444 - 29190545
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    ||||||||||| |||||||||||||||||  |||||||| ||  | |||||||||||||||||| |||| |||||||||    
T  29190444 aatgattaatatttgcaggggcagattggaaggattagtaacttcagagataaaaattcaaatggtctatatttgcagggacgaaagacctatttaaacc 29190543  T
Q  581 tt 582  Q
    ||    
T  29190544 tt 29190545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 481 - 582
Target Start/End: Complemental strand, 20096119 - 20096018
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    || |||||||| |||||||||||||| ||| |||||||| || |  |||||||||||||||||| |||| |||||||||    
T  20096119 aatgattaatatttgcagaggcaaattggaaggattagtaacttcagggacaaaaattcaaatgacatatatttgcagggacgaaagacctatttaaacc 20096020  T
Q  581 tt 582  Q
    ||    
T  20096019 tt 20096018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 481 - 582
Target Start/End: Complemental strand, 40525606 - 40525505
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    ||||||||||||||||| |  ||||||||||| |||||||||||||| |||||||||||| || |  |||||||||||| ||||| |||  |||||| ||    
T  40525606 aatgattaatatttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatgacatatatttgcaggaacgaaagacttatttaagcc 40525507  T
Q  581 tt 582  Q
    ||    
T  40525506 tt 40525505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 481 - 582
Target Start/End: Complemental strand, 41251222 - 41251121
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    ||||||||||||||| |   ||| |||||||| |||||||||||||||||||||||||||  | |  |||||||||||||||||| |||| |||||| ||    
T  41251222 aatgattaatatttgtagggacatattggaaggattagtaacttcagagacgaaaattcaattgacctatatttgcagggacgaaagacctatttaagcc 41251123  T
Q  581 tt 582  Q
    ||    
T  41251122 tt 41251121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 547720 - 547804
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    ||||||||||||||| | |  ||||||||||| ||||||||||| || |||||||||||| || || ||||||||||||||||||    
T  547720 aatgattaatatttgtagtggcagattggaaggattagtaactttagggacgaaaattcaaatgatctatatttgcagggacgaa 547804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 481 - 561
Target Start/End: Complemental strand, 29190259 - 29190179
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcaggga 561  Q
    |||||||||||||||||   | |||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||    
T  29190259 aatgattaatatttgcagggatagattggaaggattagtaacttcagagacgaaaattcagatggcctatatttgcaggga 29190179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 474 - 577
Target Start/End: Complemental strand, 9632434 - 9632331
Alignment:
Q  474 tttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccat 573  Q
    |||||| ||||||||||||||||| | ||| | |||||| |||||||||||||| |||||||||||| || |  |||||||||| |||| || |||| ||    
T  9632434 tttttcaaatgattaatatttgcaatgacaaaatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggacaaaagacctat 9632335  T
Q  574 ttaa 577  Q
    ||||    
T  9632334 ttaa 9632331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 570
Target Start/End: Complemental strand, 38619897 - 38619808
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacc 570  Q
    |||||||||  |||||| |  ||||||||||| |||||||||||||| |||||||||||| || || |||||||||||| ||||| ||||    
T  38619897 aatgattaaattttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatgatctatatttgcaggaacgaaagacc 38619808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 581
Target Start/End: Original strand, 27857027 - 27857127
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    ||||||||||  |||||||||||||| |||||||||||| ||    |||||||||||||||||| |||  |||||||||    
T  27857027 aatgattaatatttgcaagggcagattggaatgattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaaacc 27857126  T
Q  581 t 581  Q
    |    
T  27857127 t 27857127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 36623451 - 36623367
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||  | ||||||| ||| |||||||||||||| |||||||||||| ||    ||||||||||||||||||    
T  36623451 aatgattaatatttgcaggagcagattgaaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaa 36623367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 41801915 - 41801831
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    ||||||||||| ||||||||||||||  ||||||||||| || |  ||||||||||||||||||    
T  41801915 aatgattaatatttgcaggggcagattggaaggattagtaacttcaggaacgaaaattcaaatgacctatatttgcagggacgaa 41801831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 470 - 581
Target Start/End: Complemental strand, 13566520 - 13566409
Alignment:
Q  470 accatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgac 569  Q
    |||||||||| ||||||||||||||||| |  || | |||||| || | ||||||||||||| |||||||| ||    | |||||||||||||||| |||    
T  13566520 accatttttcaaatgattaatatttgcaatggcaaaatggaaggatcaataacttcagagacaaaaattcaaatgtactgtatttgcagggacgaaagac 13566421  T
Q  570 ccatttaaacct 581  Q
    | ||||||||||    
T  13566420 ctatttaaacct 13566409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 527
Target Start/End: Complemental strand, 24529789 - 24529731
Alignment:
Q  469 gaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcag 527  Q
    ||||||||||| |||||||||||||||||||  || |||||||| ||||||||||||||    
T  24529789 gaccatttttcaaatgattaatatttgcactggcacattggaaggattagtaacttcag 24529731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 582
Target Start/End: Original strand, 7678 - 7779
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    || |||||||| |||||||||||||  |||||||||||| ||    |||||||||||||||||| |||| |||||| ||    
T  7678 aatgattaatatttgcaggggcatattggaaggattagtaacttcatggacgaaaattcaaatggcctatatttgcagggacgaaagacctatttaagcc 7777  T
Q  581 tt 582  Q
    ||    
T  7778 tt 7779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 582
Target Start/End: Complemental strand, 11478244 - 11478143
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    ||||||| ||| |||||||||||||  |||||||||||| || |  ||||||||||||||||||  ||| |||||| ||    
T  11478244 aatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaaaacctatttaagcc 11478145  T
Q  581 tt 582  Q
    ||    
T  11478144 tt 11478143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 468 - 565
Target Start/End: Complemental strand, 22763707 - 22763610
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||| ||||||||||||||| | |   ||||| |||  |||||||||||||| |||||||||||| || |  |||||||||| |||||||    
T  22763707 ggaccatttttcaaatgattaatatttgtagtggtagattagaaagattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggacgaa 22763610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 468 - 577
Target Start/End: Complemental strand, 31690007 - 31689898
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 567  Q
    |||| ||||||| ||||||||| ||||||| |  || |||||||| ||| |||||||||  |||||||||||| ||  | ||||||||||||||| || |    
T  31690007 ggacaatttttcaaatgattaacatttgcagtggcatattggaaggattggtaacttcatggacgaaaattcaaatggtctatatttgcagggacaaaag 31689908  T
Q  568 acccatttaa 577  Q
    ||| ||||||    
T  31689907 acctatttaa 31689898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 582
Target Start/End: Original strand, 36623638 - 36623739
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    || ||||||||||||||||| ||||| |||||||||||| ||    |||||||||||||||||| |||  |||||| ||    
T  36623638 aatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagcc 36623737  T
Q  581 tt 582  Q
    ||    
T  36623738 tt 36623739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 582
Target Start/End: Original strand, 41182181 - 41182282
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    ||||||| ||  |||||||||||||| |||||||||||| || |  |||||||||||||||||| |||  |||||| ||    
T  41182181 aatgattaatatttgcaggggcagattgaaatgattagtaacttcagggacgaaaattcaaatgacatatatttgcagggacgaaagacatatttaagcc 41182280  T
Q  581 tt 582  Q
    ||    
T  41182281 tt 41182282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 7492 - 7408
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    ||||||||||||||| |   |||  |||||||||||||||||||||| || ||||||||| || |  ||||||||||||||||||    
T  7492 aatgattaatatttgtagggacatgttggaagaattagtaacttcagggaagaaaattcaaatgacctatatttgcagggacgaa 7408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 469 - 577
Target Start/End: Original strand, 15716149 - 15716257
Alignment:
Q  469 gaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatga 568  Q
    ||||||||||| ||||||||||||||| | |  || | | |||| |||||||||||||| |||||||||| | || |  |||||||||| ||||||| ||    
T  15716149 gaccatttttcaaatgattaatatttgtaatggcaaaatagaaggattagtaacttcagggacgaaaatttaaatgacatatatttgcatggacgaaaga 15716248  T
Q  569 cccatttaa 577  Q
    || ||||||    
T  15716249 cctatttaa 15716257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 31690181 - 31690264
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    ||||||||||||||||| |  ||||||||||  |||||||||||||| |||||||||||| || |  ||||||| ||||||||||    
T  31690181 aatgattaatatttgcagtggcagattggaatgattagtaacttcagggacgaaaattca-atgacctatatttacagggacgaa 31690264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 37343067 - 37343151
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    || ||||||||||||||||| ||||| |||||||||||| || |  ||||||||||||| ||||    
T  37343067 aatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatgacctatatttgcaggggcgaa 37343151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 43866810 - 43866726
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    || ||||||||||||||||| ||||| |||||||||||| ||    ||||||||||||||||||    
T  43866810 aatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatggcctatatttgcagggacgaa 43866726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 43866996 - 43867080
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    ||||||| ||| |||||||||||||  |||||||||||| ||  | ||||||||||||||||||    
T  43866996 aatgattaatatttgcaggggcagattgaaaggattagtaacttcatggacgaaaattcaaatggtctatatttgcagggacgaa 43867080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 502 - 565
Target Start/End: Original strand, 20096330 - 20096393
Alignment:
Q  502 cagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    ||||||||||| |||||||||||||| |||||||||||| ||    ||||||||||||||||||    
T  20096330 cagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaa 20096393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 514 - 577
Target Start/End: Original strand, 23424637 - 23424700
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||| |||||||||||| || || |||||||||||||| ||| |||| ||||||    
T  23424637 attagtaacttcagggacgaaaattcaaatgatctatatttgcagggatgaaagacctatttaa 23424700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 486 - 577
Target Start/End: Original strand, 24529946 - 24530037
Alignment:
Q  486 ttaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||| |  ||||| ||||| ||||||||||||||  ||||||||||| || |  |||||||||||| ||||| |||| ||||||    
T  24529946 ttaatatttgcagtggcagataggaaggattagtaacttcagtaacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 24530037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 481 - 540
Target Start/End: Complemental strand, 25287891 - 25287832
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattca 540  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| ||||||||||||    
T  25287891 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattca 25287832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 339
Target Start/End: Complemental strand, 10658978 - 10658884
Alignment:
Q  248 gattagagtagatccacttgtactgatttatcacga-tgtattttcgtttgagtt-ttcctaggtcaggtcttatgtcccc-tagtctttgtatc 339  Q
    ||||||||| |||||||||| | ||||||||||||| |||||||  ||||| ||| |||||| ||||||||| || ||||| |||||||||||||    
T  10658978 gattagagttgatccacttgaattgatttatcacgattgtatttctgtttgggttattcctaagtcaggtctaatttccccatagtctttgtatc 10658884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 481 - 563
Target Start/End: Original strand, 40525792 - 40525874
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacg 563  Q
    |||||||||||||||||    ||||||||||  |||||||| ||||| |||||||||||| ||||  ||||||| ||||||||    
T  40525792 aatgattaatatttgcaggggcagattggaatgattagtaatttcagggacgaaaattcaaataacctatatttacagggacg 40525874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 582
Target Start/End: Original strand, 9632612 - 9632689
Alignment:
Q  505 attggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacctt 582  Q
    |||||||| |||||||||||||  |||||||||||| || |  ||||||||||||||| || |||| |||||| ||||    
T  9632612 attggaaggattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacaaaagacctatttaagcctt 9632689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 514 - 579
Target Start/End: Complemental strand, 15716135 - 15716070
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaac 579  Q
    ||||||||||||||||||||||||||| || |  ||||||||||||||  || |||| ||||||||    
T  15716135 attagtaacttcagagacgaaaattcaaatgacctatatttgcagggataaaagacctatttaaac 15716070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 481 - 582
Target Start/End: Complemental strand, 35163596 - 35163495
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||  |||||| |  ||||||| ||| || ||||||||||  |||||||||||| ||   ||||||||||||||| ||| |||| |||||||||    
T  35163596 aatgattaaattttgcagtggcagattgaaaggatcagtaacttcaaggacgaaaattcaaatggcttatatttgcagggatgaaagacctatttaaacc 35163497  T
Q  581 tt 582  Q
    ||    
T  35163496 tt 35163495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 577
Target Start/End: Original strand, 41182023 - 41182084
Alignment:
Q  516 tagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||| |||||||||||| || |  |||||||||||||||||| |||| ||||||    
T  41182023 tagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaa 41182084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 547529 - 547445
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| ||| |||||| | ||    ||||||||||||||||||    
T  547529 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacaaaaatttaaatggcctatatttgcagggacgaa 547445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 577
Target Start/End: Complemental strand, 23424611 - 23424515
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||||||    |||||||  ||||||||||||||||| ||| |||||||| || |  ||||||| |||||| ||| |||| ||||||    
T  23424611 aatgattaatatttgcaggggcagattgttagaattagtaacttcagggacaaaaattcaaatgacctatatttacagggatgaaagacctatttaa 23424515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 23424797 - 23424881
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    ||||||||||  |||||||||||||| |||||||||||| ||    |||||||||||| |||||    
T  23424797 aatgattaatatttgcaggggcagattggaatgattagtaacttcagggacgaaaattcaaatggcctatatttgcaggaacgaa 23424881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 577
Target Start/End: Original strand, 11478270 - 11478333
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||| |||||||||||| || |  |||||||||||||| ||| |||| ||||||    
T  11478270 attagtaacttcagcgacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 11478333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 481 - 540
Target Start/End: Original strand, 11478430 - 11478489
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattca 540  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| ||||||| ||||    
T  11478430 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaagttca 11478489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 577
Target Start/End: Original strand, 22763720 - 22763783
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||| |||||||||||| |||    ||||||||||||||||| |||| ||||||    
T  22763720 attagtaacttcagggacgaaaattcaaatagcagatatttgcagggacgaaagacctatttaa 22763783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 322
Target Start/End: Complemental strand, 25140461 - 25140386
Alignment:
Q  249 attagagtagatccacttgtactgatttatcacga-tgtattttcgtttgagtt-ttcctaggtcaggtcttatgt 322  Q
    |||||||| |||||||||| | ||||||||||||| ||||||| |||||||||| |||||  ||||||||| ||||    
T  25140461 attagagttgatccacttggattgatttatcacgattgtatttccgtttgagttattcctgagtcaggtctcatgt 25140386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 577
Target Start/End: Original strand, 25287917 - 25287980
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||| |||||||||||| || |  |||||||||||||| ||| |||| ||||||    
T  25287917 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 25287980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 502 - 565
Target Start/End: Original strand, 26740024 - 26740087
Alignment:
Q  502 cagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    ||||||| ||| |||||||||||||  |||||||||||| || |  ||||||||||||||||||    
T  26740024 cagattgcaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaa 26740087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 523 - 578
Target Start/End: Complemental strand, 40933234 - 40933179
Alignment:
Q  523 ttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaa 578  Q
    |||||||||||||||||| |||| |||||||||||| ||| || |||| |||||||    
T  40933234 ttcagagacgaaaattcaaataacttatatttgcagagacaaaagacctatttaaa 40933179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 514 - 570
Target Start/End: Original strand, 9632453 - 9632509
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacc 570  Q
    |||||||||||||| |||||||||||| ||  | || ||||||||||||||| ||||    
T  9632453 attagtaacttcagtgacgaaaattcaaatggtctagatttgcagggacgaaagacc 9632509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 37342881 - 37342797
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    | ||||| ||| ||||||||||||||  ||||||||||| ||  | | ||||||||||||||||    
T  37342881 aatgattaatatttgcaggggcggattgaaaggattagtaacttcaggaacgaaaattcaaatggtctgtatttgcagggacgaa 37342797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 514 - 562
Target Start/End: Complemental strand, 40422419 - 40422371
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggac 562  Q
    |||||||||||||| |||||||||||| || |  |||||||||||||||    
T  40422419 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggac 40422371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 1e-21; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 468 - 577
Target Start/End: Original strand, 7015781 - 7015890
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 567  Q
    |||| ||||||| ||||||||||||||||| |  ||||||||||| |||||||||||||| |||||||||||| |  | ||||||||||| ||||||| |    
T  7015781 ggactatttttcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaacgacttatatttgcaaggacgaaag 7015880  T
Q  568 acccatttaa 577  Q
    ||| ||||||    
T  7015881 acctatttaa 7015890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 481 - 582
Target Start/End: Original strand, 33735598 - 33735699
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| |||||||||||| || |  |||||||||||||||||| |||| |||||| ||    
T  33735598 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcc 33735697  T
Q  581 tt 582  Q
    ||    
T  33735698 tt 33735699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 468 - 552
Target Start/End: Original strand, 27753751 - 27753835
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatat 552  Q
    |||| ||||||| ||||||||||||||||| |  ||||||||||| ||||||||||||||| ||||||||||| |||| ||||||    
T  27753751 ggactatttttcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagaaacgaaaattcaaataacttatat 27753835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 468 - 582
Target Start/End: Original strand, 22024142 - 22024256
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 567  Q
    |||||||||||| ||||||||||||||||| |  || |||||||| ||||||||||| || |||||||||||| || |  ||||||||||| |||||| |    
T  22024142 ggaccatttttcaaatgattaatatttgcagtggcaaattggaaggattagtaacttaagtgacgaaaattcaaatgacctatatttgcagagacgaaag 22024241  T
Q  568 acccatttaaacctt 582  Q
    ||  |||||| ||||    
T  22024242 acgtatttaagcctt 22024256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 472 - 565
Target Start/End: Complemental strand, 21260973 - 21260880
Alignment:
Q  472 catttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||| ||||||||||||||||| |  || | |||||| |||||||||||||| |||||||||||| || |  ||||||||||||||||||    
T  21260973 catttttcaaatgattaatatttgcaatggcaaaatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaa 21260880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 481 - 582
Target Start/End: Original strand, 32052509 - 32052610
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| |||||||||||| || |  |||||||||||||||||| |||  |||||| ||    
T  32052509 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcc 32052608  T
Q  581 tt 582  Q
    ||    
T  32052609 tt 32052610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 12991073 - 12991157
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||     |||||||||| ||||||||||||||||||||||||||| || |  ||||||||||||||||||    
T  12991073 aatgattaatatttgcaggggtagattggaaggattagtaacttcagagacgaaaattcaaatgacatatatttgcagggacgaa 12991157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 13064694 - 13064778
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    ||||||||||| ||||||||||| ||||||||||||||| || |  ||||||||||||||||||    
T  13064694 aatgattaatatttgcaggggcagattggaaggattagtaactttagagacgaaaattcaaatgacatatatttgcagggacgaa 13064778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 481 - 577
Target Start/End: Complemental strand, 14745547 - 14745451
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| || ||||||||| || |  |||||||||||||||||| |||| ||||||    
T  14745547 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatgacctatatttgcagggacgaaagacctatttaa 14745451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 469 - 577
Target Start/End: Complemental strand, 34404594 - 34404487
Alignment:
Q  469 gaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatga 568  Q
    ||||||||||| ||||||||||||||||| |  || || ||||| |||||||||||||| |||||||||||| || |  |||||||||||| ||||| ||    
T  34404594 gaccatttttcaaatgattaatatttgcaatgccaaat-ggaaggattagtaacttcagtgacgaaaattcaaatgacctatatttgcaggaacgaaaga 34404496  T
Q  569 cccatttaa 577  Q
    || ||||||    
T  34404495 cctatttaa 34404487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 582
Target Start/End: Original strand, 6421907 - 6422008
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    || |||| ||| |||||||| ||||| |||||||||||| || | |||||||||||||| |||| |||| |||||||||    
T  6421907 aatgattaatatttgcaggggcatattgaaaggattagtaatttcagggacgaaaattcaaatgacttatatttgcaggggcgaaagacctatttaaacc 6422006  T
Q  581 tt 582  Q
    ||    
T  6422007 tt 6422008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 25253371 - 25253455
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||| ||||||||    ||||||||||| |||||||||||||| |||||||||||| || |  ||||||||||||||||||    
T  25253371 aatgattagtatttgcaagggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaa 25253455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 25317162 - 25317246
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||| ||||||||    ||||||||||| |||||||||||||| |||||||||||| || |  ||||||||||||||||||    
T  25317162 aatgattagtatttgcaagggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaa 25317246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 468 - 582
Target Start/End: Original strand, 22533662 - 22533776
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 567  Q
    |||||||||||| ||||||||||||||||| |  ||   | |||| |||||||||||| | |||||||||||| || |  ||||||||||||||||||      
T  22533662 ggaccatttttcaaatgattaatatttgcaatggcaacattgaaggattagtaacttcggggacgaaaattcaaatgacctatatttgcagggacgaaaa 22533761  T
Q  568 acccatttaaacctt 582  Q
    | | |||||||||||    
T  22533762 agctatttaaacctt 22533776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 570
Target Start/End: Complemental strand, 27753577 - 27753489
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacc 570  Q
    ||||||||||||||||| |  ||| ||||||| |||||||||||||  |||||||||||| || |  |||||||||||||||||| ||||    
T  27753577 aatgattaatatttgcagtggcagtttggaaggattagtaacttcatggacgaaaattca-atgacctatatttgcagggacgaaagacc 27753489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 582
Target Start/End: Original strand, 37945279 - 37945379
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    ||||||| ||| |||||||||||||| |||||||||||| || |  |||||||||||||||||| |||  |||||| ||    
T  37945279 aatgattaatatttgcaagggcagattgaaaggattagtaacttcagggacgaaaattca-atgacctatatttgcagggacgaaagacatatttaagcc 37945377  T
Q  581 tt 582  Q
    ||    
T  37945378 tt 37945379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 577
Target Start/End: Complemental strand, 7015607 - 7015511
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    ||||||||||||||||| |  ||||||||||  |||||||||||||  || ||||||||| ||    |||||||||||||||||| |||| ||||||    
T  7015607 aatgattaatatttgcagtggcagattggaatgattagtaacttcatggatgaaaattcaaatggcctatatttgcagggacgaaagacctatttaa 7015511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 577
Target Start/End: Original strand, 8323341 - 8323437
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    ||||||||||||||||| |  || | || |||||||||||||||||  |||||||||||| |||   ||||||||||||| |||| |||| ||||||    
T  8323341 aatgattaatatttgcaatggcaaaatgaaagaattagtaacttcaaggacgaaaattcaaatagcatatatttgcaggggcgaaagacctatttaa 8323437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 14745598 - 14745682
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| |||||||||||| ||    |||||||| |||||||||    
T  14745598 aatgattaatatttgcaagggcagattggaaggattagtaacttcagcgacgaaaattcaaatggcctatatttgtagggacgaa 14745682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 469 - 561
Target Start/End: Complemental strand, 18934824 - 18934732
Alignment:
Q  469 gaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcaggga 561  Q
    ||||||||||| ||||| ||||||||||| |  || | || ||| |||||||||||||  |||||||||||| || | |||||||||||||||    
T  18934824 gaccatttttcaaatgactaatatttgcaatggcaaaatgaaaggattagtaacttcatggacgaaaattcaaatgacttatatttgcaggga 18934732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 561
Target Start/End: Complemental strand, 25253185 - 25253105
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcaggga 561  Q
    |||||||||||||||||    || |||||||| |||||||||||||| |||||||||||| || |  ||||||||||||||    
T  25253185 aatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgaactatatttgcaggga 25253105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 561
Target Start/End: Complemental strand, 25316975 - 25316895
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcaggga 561  Q
    |||||||||||||||||    || |||||||| |||||||||||||| |||||||||||| || |  ||||||||||||||    
T  25316975 aatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgaactatatttgcaggga 25316895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 32052323 - 32052239
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    | ||||||||| |||||||||||||| |||||||||||| || |  ||||||| ||||||||||    
T  32052323 aatgattaatatttgcaggggcggattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaa 32052239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 577
Target Start/End: Complemental strand, 37945093 - 37944997
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||||||    || |||||||| |||||||||||||| |||||||||||| || |  ||||||| || ||||||| |||| ||||||    
T  37945093 aatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttacaaggacgaaagacctatttaa 37944997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 514 - 577
Target Start/End: Complemental strand, 16118210 - 16118147
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    ||||||||||| ||||||||||||||| || |  |||||||||||||||||| |||| ||||||    
T  16118210 attagtaactttagagacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaa 16118147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 565
Target Start/End: Complemental strand, 41339611 - 41339562
Alignment:
Q  516 tagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||| |||||||||||| || || ||||||||||||||||||    
T  41339611 tagtaacttcagggacgaaaattcaaatgatctatatttgcagggacgaa 41339562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 582
Target Start/End: Complemental strand, 16118027 - 16117959
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacctt 582  Q
    |||||||||||||| |||||||||||| || |  ||||||| ||||||| || |||| |||||||||||    
T  16118027 attagtaacttcagggacgaaaattcaaatgacctatatttacagggacaaaagacctatttaaacctt 16117959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 33735412 - 33735328
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||   |||||||||||| |||||||| ||||| |||||||| ||| ||    |||||||| |||||||||    
T  33735412 aatgattaatatttgcagggacagattggaaggattagtaatttcagggacgaaaaatcaaatggcctatatttgtagggacgaa 33735328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 565
Target Start/End: Original strand, 12628340 - 12628391
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||| |||||||||||| || | ||||||||||| |||||||    
T  12628340 attagtaacttcagggacgaaaattcaaatcacttatatttgcatggacgaa 12628391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 577
Target Start/End: Complemental strand, 22533649 - 22533586
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||| |||||||||||| || |  || ||||||||||||||| |||| ||||||    
T  22533649 attagtaacttcagggacgaaaattcaaatgacctaaatttgcagggacgaaagacctatttaa 22533586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 577
Target Start/End: Complemental strand, 33735572 - 33735509
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||| |||||||||||| || |  |||||||||||||| ||| |||| ||||||    
T  33735572 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 33735509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 576
Target Start/End: Complemental strand, 6421881 - 6421819
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccattta 576  Q
    |||||||||||||| |||||||||||| || |  |||||||||||||| ||| |||| |||||    
T  6421881 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctattta 6421819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 481 - 581
Target Start/End: Complemental strand, 6421721 - 6421621
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    ||||||||||||||| |    ||||||| ||  |||||||||||||  ||| |||||||| || |  |||||||||||||||||| |||  |||||||||    
T  6421721 aatgattaatatttgtaggggcagattgaaaagattagtaacttcaaggacaaaaattcaaatgacatatatttgcagggacgaaagacatatttaaacc 6421622  T
Q  581 t 581  Q
    |    
T  6421621 t 6421621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 472 - 580
Target Start/End: Complemental strand, 8323164 - 8323056
Alignment:
Q  472 catttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgaccc 571  Q
    |||||||| |||||||||||| | || |  || | |||||| |||||||||||||  |||||||||||| || |  |||||||  ||||| ||| ||||     
T  8323164 catttttcaaatgattaatatcttcaatggcaaaatggaaggattagtaacttcatggacgaaaattcaaatgacctatatttatagggatgaaagacct 8323065  T
Q  572 atttaaacc 580  Q
    |||||||||    
T  8323064 atttaaacc 8323056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 502 - 582
Target Start/End: Complemental strand, 22533468 - 22533388
Alignment:
Q  502 cagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacctt 582  Q
    ||||||||||  |||| ||||||||| |||||||||||| || |  |||||||||| || |||| |||| |||||| ||||    
T  22533468 cagattggaatgattaataacttcagggacgaaaattcaaatgacctatatttgcaagggcgaaagacctatttaagcctt 22533388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 248 - 339
Target Start/End: Complemental strand, 34793169 - 34793078
Alignment:
Q  248 gattagagtagatccacttgtactgatttatcacgatgtattttcgtttg-agttttcctaggtcaggtcttatgtcccctagtctttgtatc 339  Q
    ||||||||| |||||| ||| |||||||||||||||| ||||  | |||| | ||||||| |||||||||  |||||||| ||||||| ||||    
T  34793169 gattagagttgatccaattggactgatttatcacgatatattcccatttgaatttttcctgggtcaggtc-catgtcccccagtctttatatc 34793078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 4e-21; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 469 - 581
Target Start/End: Complemental strand, 20947304 - 20947192
Alignment:
Q  469 gaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatga 568  Q
    ||||||||||| ||||||||||||||| | |  ||||||||||| |||||||||||||  |||||||||||| || |  |||||||| ||||||||| ||    
T  20947304 gaccatttttcaaatgattaatatttgtagtggcagattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgaagggacgaaaga 20947205  T
Q  569 cccatttaaacct 581  Q
    || ||||||||||    
T  20947204 cctatttaaacct 20947192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 468 - 577
Target Start/End: Original strand, 5280543 - 5280652
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 567  Q
    |||||||||||| ||||||||||||||||| | |||||||  ||| |||||||||||||| |||||||||||| || |  |||||||||| |||| || |    
T  5280543 ggaccatttttcaaatgattaatatttgcaatgacagattcaaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggacaaaag 5280642  T
Q  568 acccatttaa 577  Q
    ||| ||||||    
T  5280643 acctatttaa 5280652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 502 - 582
Target Start/End: Original strand, 5636331 - 5636411
Alignment:
Q  502 cagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacctt 582  Q
    ||||||||||| |||||||||||||| |||||||||||| || | ||||||||||| ||||||| |||| |||||||||||    
T  5636331 cagattggaaggattagtaacttcagggacgaaaattcaaattacttatatttgcaaggacgaaagacctatttaaacctt 5636411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 481 - 582
Target Start/End: Original strand, 34454765 - 34454866
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    ||||||| |||||||||||||||||| |||||||||||| || || |||||||||||||| ||| | || |||||| ||    
T  34454765 aatgattaatatttgcaggggcagattgaaagaattagtaacttcagggacgaaaattcaaatgatctatatttgcagggatgaaagtcctatttaagcc 34454864  T
Q  581 tt 582  Q
    ||    
T  34454865 tt 34454866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 468 - 566
Target Start/End: Complemental strand, 5636137 - 5636040
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaat 566  Q
    |||||||||||| ||||||||||||||||| |  || || ||||| ||||||||||| || |||||||||||| || |  |||||||||||||||||||    
T  5636137 ggaccatttttcaaatgattaatatttgcaatggcaaat-ggaaggattagtaactttagggacgaaaattcaaatgacctatatttgcagggacgaat 5636040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 469 - 570
Target Start/End: Complemental strand, 27557959 - 27557858
Alignment:
Q  469 gaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatga 568  Q
    ||||||||||| ||||||||||||||||| |  || | ||||||||||| ||||||||  |||||||||||| || |  ||||||| |||||||||| ||    
T  27557959 gaccatttttcaaatgattaatatttgcaatggcaaaatggaagaattattaacttcaaggacgaaaattcaaatgacctatatttacagggacgaaaga 27557860  T
Q  569 cc 570  Q
    ||    
T  27557859 cc 27557858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 582
Target Start/End: Complemental strand, 34454583 - 34454482
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||     |||||||||| ||||||||||||| ||||||||||||| || |  |||||||||||||||||| |||  |||||| ||    
T  34454583 aatgattaatatttgcaggggtagattggaaggattagtaacttcaaagacgaaaattcaaatgacctatatttgcagggacgaaggacatatttaagcc 34454484  T
Q  581 tt 582  Q
    ||    
T  34454483 tt 34454482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 582
Target Start/End: Complemental strand, 47081946 - 47081845
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||| || |  ||||||| ||| ||||||||||||||||| ||||||||| || |  |||||||| ||||||||| |||| |||||| ||    
T  47081946 aatgattaatatttacaatggcagattgaaaggattagtaacttcagagatgaaaattcaaatgacatatatttgaagggacgaaagacctatttaagcc 47081847  T
Q  581 tt 582  Q
    ||    
T  47081846 tt 47081845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 12931023 - 12931107
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| |||||||||||| || |   |||||||||||||||||    
T  12931023 aatgattaatatttgcatgggcagattggaaggattagtaacttcagggacgaaaattcaaatgaccaatatttgcagggacgaa 12931107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 43938179 - 43938263
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| |||||||||||| ||   ||||||||||| |||||||    
T  43938179 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggcttatatttgcaaggacgaa 43938263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 468 - 580
Target Start/End: Original strand, 44545867 - 44545979
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 567  Q
    |||||||||||  ||||||||||||||||| |   | | | |||| |||||||||||||| |||||||||||| || | || |||||||| ||||||| |    
T  44545867 ggaccatttttaaaatgattaatatttgcaatggtaaaattgaaggattagtaacttcagggacgaaaattcaaatgacttgtatttgcatggacgaaag 44545966  T
Q  568 acccatttaaacc 580  Q
    ||| |||||||||    
T  44545967 acctatttaaacc 44545979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 503 - 577
Target Start/End: Original strand, 47121585 - 47121659
Alignment:
Q  503 agattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||| ||| ||||||||||||||||||||||||||| ||  |  ||||||||||||||||| |||| ||||||    
T  47121585 agattgaaagtattagtaacttcagagacgaaaattcaaatggtcaatatttgcagggacgaaagacctatttaa 47121659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 12929539 - 12929623
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    ||||||||||||||||||   ||||||||||| |||||| ||||||| |||| ||||||| || |   |||||||||||||||||    
T  12929539 aatgattaatatttgcacgggcagattggaaggattagtcacttcagggacggaaattcaaatgaccaatatttgcagggacgaa 12929623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 557
Target Start/End: Original strand, 20947479 - 20947555
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgca 557  Q
    |||||||||||||| || |   |||||||||| ||||||||||||| ||| ||||||||| |||| |||||||||||    
T  20947479 aatgattaatatttacagtggtagattggaaggattagtaacttcatagatgaaaattcaaataacttatatttgca 20947555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 561
Target Start/End: Original strand, 23191139 - 23191218
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcaggga 561  Q
    ||||||||||||||||| |  |||||||||||||||||||| ||||  ||||| |||||| ||||  ||||||||||||||    
T  23191139 aatgattaatatttgcagtggcagattggaagaattagtaaattca-tgacgataattcaaataacatatatttgcaggga 23191218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 577
Target Start/End: Original strand, 27558137 - 27558233
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    ||||||||||||||||| |  || | |||||| ||||||||||||   |||||||||||| || |  |||||||||||||||||| |||| ||||||    
T  27558137 aatgattaatatttgcaatggcaaaatggaaggattagtaacttcgtggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaa 27558233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 481 - 579
Target Start/End: Complemental strand, 35262725 - 35262627
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagat-aatttatatttgcagggacgaatgacccatttaaac 579  Q
    |||||||||  |||||| |  ||||||||||| |||||||||||||||||| |||||||| || | | ||| |||||||||||||| |||| ||||||||    
T  35262725 aatgattaaattttgcagtggcagattggaaggattagtaacttcagagacaaaaattcaaatgactatat-tttgcagggacgaaagacctatttaaac 35262627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 339
Target Start/End: Complemental strand, 20118045 - 20117951
Alignment:
Q  248 gattagagtagatccacttgtactgatttatcacga-tgtattttcgtttgagtt-ttcctaggtcaggtcttatgtcccct-agtctttgtatc 339  Q
    ||||||||| |||||||||| | ||||||||||||| ||||||| | |||| ||| |||||| |||||||||||| |||||| | ||||||||||    
T  20118045 gattagagttgatccacttggattgatttatcacgattgtatttccatttgggttattcctaagtcaggtcttatatcccctcaatctttgtatc 20117951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 481 - 582
Target Start/End: Complemental strand, 26825729 - 26825628
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||| ||||||    ||||||||||  |||||||||||||| |||||||||||| || |  ||||||| |||||||||| |||  |||||| ||    
T  26825729 aatgattaatctttgcaggggcagattggaatgattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaagacatatttaagcc 26825630  T
Q  581 tt 582  Q
    ||    
T  26825629 tt 26825628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 481 - 582
Target Start/End: Original strand, 26825915 - 26826016
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    ||||||| ||| |||| ||||||||  |||||||||||| || |  |||||||||||| ||||| |||| |||||| ||    
T  26825915 aatgattaatatttgcaggggcagattgaaaggattaataacttcatggacgaaaattcaaatgacatatatttgcaggaacgaaagacctatttaagcc 26826014  T
Q  581 tt 582  Q
    ||    
T  26826015 tt 26826016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 485 - 565
Target Start/End: Complemental strand, 5280367 - 5280287
Alignment:
Q  485 attaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||| || |  ||||||||||| ||||||||||||||  ||||||||||| ||    ||||||||||||||||||    
T  5280367 attaatatttacagtggcagattggaaggattagtaacttcagtaacgaaaattcaaatggcctatatttgcagggacgaa 5280287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 513 - 565
Target Start/End: Original strand, 5636149 - 5636201
Alignment:
Q  513 aattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    ||||||||||||||| |||||||||||| || | ||||||||| |||||||||    
T  5636149 aattagtaacttcagggacgaaaattcaaatgacttatatttgaagggacgaa 5636201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 582
Target Start/End: Original strand, 7159246 - 7159314
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacctt 582  Q
    ||||||||||||||  ||||||||||| || || |||||||||||||| |||||||  |||||| ||||    
T  7159246 attagtaacttcaggaacgaaaattcaaatgatctatatttgcagggatgaatgacatatttaagcctt 7159314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 587
Target Start/End: Original strand, 15827993 - 15828113
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagag-acgaaaattcagataatttatatttgcagggacgaat 566  Q
    |||||||||||| ||||||||||||||||| |  || ||||||| ||||| ||| ||||| |   ||||||||| || | |||||||||||| ||||||     
T  15827993 ggaccatttttcaaatgattaatatttgcagtggcaaattggaataattattaatttcagggttagaaaattcaaatgacttatatttgcagagacgaaa 15828092  T
Q  567 gacccatttaaaccttgattt 587  Q
    |  | ||||||||||| ||||    
T  15828093 gttctatttaaaccttaattt 15828113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 43937993 - 43937909
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| || ||||||||| || |  ||||||| || |||||||    
T  43937993 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatgacctatatttacaaggacgaa 43937909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 577
Target Start/End: Original strand, 27557973 - 27558036
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||  |||||||||||| || |  |||||||||||||||||| |||| ||||||    
T  27557973 attagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaa 27558036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 577
Target Start/End: Complemental strand, 34454739 - 34454676
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||| |||||||||||| || |  |||||||||||||| ||| |||| ||||||    
T  34454739 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 34454676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 583
Target Start/End: Original strand, 37563642 - 37563741
Alignment:
Q  484 gattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaaccttg 583  Q
    ||||||||||||||    || |||||||| |||||||||||||| |||||||||||| ||    ||||||| |||||||||| |||  |||||| |||||    
T  37563642 gattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttacagggacgaaagacatatttaagccttg 37563741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 580
Target Start/End: Complemental strand, 47082106 - 47082040
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||| ||||||||| |||||||||||| || |  |||||||||||||||||| |||  |||||||||    
T  47082106 attaataacttcagggacgaaaattcaaatgaactatatttgcagggacgaaagacttatttaaacc 47082040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 514 - 587
Target Start/End: Original strand, 19980211 - 19980284
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaaccttgattt 587  Q
    |||||||||||||  ||| |||||||| || | |||||||||||| || ||| |||| ||||||||||| ||||    
T  19980211 attagtaacttcaaggacaaaaattcaaatgacttatatttgcagtgatgaaagacctatttaaacctttattt 19980284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 562
Target Start/End: Complemental strand, 37563453 - 37563372
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggac 562  Q
    |||||||||||||||||    |||||| |||| |||||||| ||||| |||||||||||| ||    |||||||||||||||    
T  37563453 aatgattaatatttgcaggggcagattagaaggattagtaaattcagggacgaaaattcaaatggcctatatttgcagggac 37563372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 481 - 577
Target Start/End: Original strand, 12928324 - 12928420
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    ||||||| |||||||||    ||||||  ||| |||||||||||||  |||||||||||| ||  | ||||||||||||||| || |||| ||||||    
T  12928324 aatgattgatatttgcagcggcagattaaaaggattagtaacttcaaggacgaaaattcaaatggtctatatttgcagggacaaaagacctatttaa 12928420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 468 - 577
Target Start/End: Complemental strand, 8545 - 8436
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 567  Q
    |||||||||||| ||||||||||||||||| |  ||||||||||| |||||||||||||| |||||||||||| || |  |||||||  || |||||| |    
T  8545 ggaccatttttcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttaaagagacgaaag 8446  T
Q  568 acccatttaa 577  Q
    ||| ||||||    
T  8445 acctatttaa 8436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 481 - 582
Target Start/End: Complemental strand, 10424 - 10323
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 580  Q
    |||||||||||||||||    || |||||||| |||||||||||||| |||||||||||| || || |||||||||||||||||| |||| |||||| ||    
T  10424 aatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgatctatatttgcagggacgaaagacctatttaagcc 10325  T
Q  581 tt 582  Q
    ||    
T  10324 tt 10323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 468 - 580
Target Start/End: Complemental strand, 14347 - 14235
Alignment:
Q  468 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 567  Q
    |||| ||||||| ||| ||||||||||||| |  || |||||||| ||||||||| |||  |||||||||||| || | ||||||||||||||||||| |    
T  14347 ggacgatttttcaaattattaatatttgcagtggcaaattggaaggattagtaacctcaaggacgaaaattcaaatgacttatatttgcagggacgaaag 14248  T
Q  568 acccatttaaacc 580  Q
    ||| |||||||||    
T  14247 acctatttaaacc 14235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 577
Target Start/End: Original strand, 14519 - 14615
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||| || |  |||||| |||| |||||||||||||  |||||||||||| || |  ||||||| |||||| ||| |||| ||||||    
T  14519 aatgattaatatttacagtggcagatttgaaggattagtaacttcaaggacgaaaattcaaatgacctatatttacagggaggaaggacctatttaa 14615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 469 - 570
Target Start/End: Original strand, 11130 - 11231
Alignment:
Q  469 gaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatga 568  Q
    ||||||||||| ||||||||||||||||| |  || | ||||||||||| ||||||||  |||||||||||| || |  ||||||| |||||||||| ||    
T  11130 gaccatttttcaaatgattaatatttgcaatggcaaaatggaagaattattaacttcaaggacgaaaattcaaatgacctatatttacagggacgaaaga 11229  T
Q  569 cc 570  Q
    ||    
T  11230 cc 11231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 577
Target Start/End: Complemental strand, 10952 - 10856
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    ||||||||||||||||| |  || | |||||| ||||||||||||   |||||||||||| || |  |||||||||||||||||| |||| ||||||    
T  10952 aatgattaatatttgcaatggcaaaatggaaggattagtaacttcgtggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaa 10856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 577
Target Start/End: Complemental strand, 11116 - 11053
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||  |||||||||||| || |  |||||||||||||||||| |||| ||||||    
T  11116 attagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaa 11053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 481 - 540
Target Start/End: Original strand, 878 - 937
Alignment:
Q  481 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattca 540  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| ||||||||||||    
T  878 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattca 937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 577
Target Start/End: Complemental strand, 852 - 789
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 577  Q
    |||||||||||||| |||||||||||| || |  |||||||||||||| ||| |||| ||||||    
T  852 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 565
Target Start/End: Original strand, 120324 - 120375
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 565  Q
    |||||||||||||  |||||||||||| ||||  ||||||||||||||||||    
T  120324 attagtaacttcatggacgaaaattcaaataacatatatttgcagggacgaa 120375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 584
Target Start/End: Complemental strand, 120307 - 120201
Alignment:
Q  472 catttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgaccc 571  Q
    |||| ||| ||||||||||||||||| |  || |||||||| ||||||||       || ||||||||| || || || ||||||||||||||| ||||     
T  120307 cattattcaaatgattaatatttgcagttgcatattggaaggattagtaag------gatgaaaattcaaatgatctacatttgcagggacgaaagacct 120214  T
Q  572 atttaaaccttga 584  Q
    |||||||||||||    
T  120213 atttaaaccttga 120201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 576
Target Start/End: Original strand, 10787 - 10849
Alignment:
Q  514 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccattta 576  Q
    |||||||||||||| |||||||||||| || |  |||||||||||||| ||| |||| |||||    
T  10787 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctattta 10849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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