View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15051_high_2 (Length: 313)
Name: NF15051_high_2
Description: NF15051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15051_high_2 |
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Alignment Details
Target: chr2 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 13 - 288
Target Start/End: Original strand, 4783230 - 4783505
Alignment:
| Q |
13 |
tgagaagaaagctaggtgttgtagcttttgaaagtttaaattaagaaagcatgttgagattaataattcaagcttaggtgtatatatcaattagtttaag |
112 |
Q |
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| T |
4783230 |
tgagaagaaagctaggtgttgtagcttttgaaagtttaaattaagaaagcatgttgagattaataattcaagcttaggtgcatataacaattagtttaag |
4783329 |
T |
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| Q |
113 |
ttagttaattagctgtgccctatgcaactaactttctgtgttttaaggcttagtttgttgacactatagcagctacttgttgaaactgcatatccacttg |
212 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4783330 |
ttagttagttagctgtgccctatgcaactaactttctgtgttttaaggcttagtttgttgacactatagcagctacttgttgaaactgcatatccacttg |
4783429 |
T |
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| Q |
213 |
tatatacatctcactcttgtgaataataaacatggtcttttcatatatatctcactcttaactcaagctgaaagca |
288 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4783430 |
tatatacatctcactcttgtgaataataaacatggtcttttcatatatatctcactcttaactcaagctgaaagca |
4783505 |
T |
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