View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15051_low_1 (Length: 490)

Name: NF15051_low_1
Description: NF15051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15051_low_1
NF15051_low_1
[»] chr1 (41 HSPs)
chr1 (237-481)||(17405671-17405911)
chr1 (1-228)||(19015446-19015675)
chr1 (1-227)||(6883529-6883757)
chr1 (1-229)||(36966501-36966731)
chr1 (2-229)||(41876235-41876464)
chr1 (1-227)||(37821629-37821857)
chr1 (1-226)||(40215030-40215257)
chr1 (2-229)||(51737548-51737777)
chr1 (2-227)||(25463719-25463946)
chr1 (1-229)||(44094740-44094969)
chr1 (1-227)||(9910086-9910316)
chr1 (1-227)||(25973456-25973677)
chr1 (2-227)||(3559660-3559887)
chr1 (2-229)||(18404485-18404720)
chr1 (32-229)||(20304923-20305123)
chr1 (1-227)||(32000061-32000290)
chr1 (1-229)||(33786424-33786658)
chr1 (2-229)||(27523048-27523277)
chr1 (1-225)||(40273744-40273976)
chr1 (1-225)||(44690818-44691052)
chr1 (1-76)||(16045746-16045821)
chr1 (151-227)||(19722894-19722970)
chr1 (2-229)||(10167443-10167672)
chr1 (35-118)||(52329345-52329427)
chr1 (31-118)||(51621002-51621085)
chr1 (151-224)||(33786623-33786696)
chr1 (151-223)||(16045786-16045859)
chr1 (151-223)||(40214992-40215065)
chr1 (151-223)||(40273706-40273779)
chr1 (16-75)||(34519815-34519874)
chr1 (151-223)||(44094702-44094775)
chr1 (155-226)||(52064373-52064445)
chr1 (151-223)||(6883491-6883564)
chr1 (151-223)||(9910281-9910354)
chr1 (151-223)||(19015408-19015481)
chr1 (151-223)||(32000255-32000328)
chr1 (151-223)||(36966696-36966769)
chr1 (151-223)||(37821822-37821895)
chr1 (1-35)||(44690858-44690892)
chr1 (127-189)||(52329445-52329507)
chr1 (34-106)||(7335449-7335521)
[»] chr8 (63 HSPs)
chr8 (1-228)||(40779923-40780152)
chr8 (1-227)||(17841645-17841873)
chr8 (2-227)||(6108028-6108255)
chr8 (1-228)||(26041907-26042139)
chr8 (1-225)||(20091598-20091824)
chr8 (1-227)||(3596836-3597064)
chr8 (2-228)||(37985850-37986077)
chr8 (1-227)||(25581034-25581262)
chr8 (1-227)||(42754837-42755065)
chr8 (1-228)||(32064787-32065017)
chr8 (1-225)||(34665424-34665649)
chr8 (2-229)||(1645757-1645987)
chr8 (1-228)||(15187602-15187831)
chr8 (2-215)||(35353084-35353299)
chr8 (2-226)||(14128907-14129128)
chr8 (1-202)||(8453876-8454078)
chr8 (2-215)||(32393901-32394114)
chr8 (1-216)||(39772608-39772824)
chr8 (6-227)||(10044390-10044618)
chr8 (1-229)||(31347569-31347805)
chr8 (1-118)||(24211459-24211576)
chr8 (57-227)||(30055615-30055786)
chr8 (1-227)||(24844655-24844881)
chr8 (72-225)||(38017047-38017201)
chr8 (133-228)||(1503637-1503732)
chr8 (1-224)||(3890412-3890639)
chr8 (1-229)||(7022020-7022251)
chr8 (2-196)||(41819594-41819800)
chr8 (127-225)||(24211169-24211267)
chr8 (1-228)||(30834849-30835070)
chr8 (1-118)||(7017771-7017888)
chr8 (5-114)||(27782027-27782136)
chr8 (1-172)||(27835303-27835476)
chr8 (2-85)||(15972816-15972899)
chr8 (128-225)||(37132477-37132575)
chr8 (137-229)||(7017651-7017743)
chr8 (151-223)||(32064749-32064822)
chr8 (151-223)||(34665386-34665459)
chr8 (151-223)||(17841838-17841911)
chr8 (151-223)||(20091789-20091862)
chr8 (151-223)||(31347770-31347843)
chr8 (151-223)||(40780117-40780190)
chr8 (151-215)||(42755030-42755095)
chr8 (165-215)||(1886621-1886672)
chr8 (1-40)||(3817914-3817953)
chr8 (151-224)||(24844847-24844920)
chr8 (151-223)||(7017853-7017926)
chr8 (151-215)||(7021990-7022055)
chr8 (151-223)||(8453838-8453911)
chr8 (151-223)||(15187564-15187637)
chr8 (151-223)||(26042104-26042177)
chr8 (1-38)||(30055708-30055745)
chr8 (151-222)||(25581227-25581299)
chr8 (151-215)||(30835035-30835099)
chr8 (160-215)||(38016983-38017039)
chr8 (31-118)||(30797114-30797200)
chr8 (1-36)||(41819604-41819639)
chr8 (2-36)||(30834893-30834927)
chr8 (53-107)||(37132593-37132647)
chr8 (151-196)||(3890605-3890649)
chr8 (151-223)||(27835441-27835514)
chr8 (151-215)||(39772789-39772854)
chr8 (4-36)||(37132520-37132552)
[»] chr5 (31 HSPs)
chr5 (2-228)||(4892245-4892473)
chr5 (2-229)||(25398281-25398510)
chr5 (2-227)||(33584124-33584351)
chr5 (5-224)||(12850847-12851069)
chr5 (1-227)||(6043307-6043534)
chr5 (1-226)||(3362820-3363048)
chr5 (2-228)||(37321587-37321815)
chr5 (5-228)||(3521801-3522025)
chr5 (1-227)||(8145417-8145643)
chr5 (1-228)||(14138710-14138938)
chr5 (1-227)||(38899520-38899749)
chr5 (2-227)||(2477679-2477906)
chr5 (2-206)||(11360947-11361153)
chr5 (1-227)||(22912852-22913077)
chr5 (1-185)||(4433845-4434030)
chr5 (1-228)||(12614531-12614756)
chr5 (1-118)||(31640846-31640963)
chr5 (1-228)||(17545476-17545708)
chr5 (1-118)||(27481868-27481981)
chr5 (151-223)||(22913042-22913115)
chr5 (49-118)||(36880229-36880298)
chr5 (151-223)||(6043499-6043572)
chr5 (151-215)||(8145387-8145452)
chr5 (151-223)||(4433995-4434068)
chr5 (151-223)||(12614721-12614794)
chr5 (151-196)||(17545673-17545718)
chr5 (160-215)||(10458409-10458465)
chr5 (134-189)||(13664736-13664791)
chr5 (1-36)||(13664753-13664788)
chr5 (197-225)||(12614483-12614511)
chr5 (1-37)||(27482016-27482052)
[»] chr4 (51 HSPs)
chr4 (1-229)||(49387680-49387911)
chr4 (1-225)||(9088912-9089138)
chr4 (1-229)||(46441886-46442116)
chr4 (1-229)||(47290108-47290338)
chr4 (1-229)||(53123073-53123303)
chr4 (1-228)||(44893007-44893236)
chr4 (1-227)||(44893468-44893696)
chr4 (1-225)||(24128281-24128507)
chr4 (1-229)||(31078612-31078842)
chr4 (1-227)||(36073392-36073619)
chr4 (1-229)||(36072989-36073223)
chr4 (1-229)||(4751488-4751719)
chr4 (2-228)||(7744906-7745134)
chr4 (1-228)||(10442581-10442812)
chr4 (2-228)||(50156373-50156600)
chr4 (1-228)||(21802114-21802345)
chr4 (1-229)||(22199303-22199531)
chr4 (1-229)||(2624879-2625109)
chr4 (1-225)||(17655472-17655699)
chr4 (1-227)||(33530479-33530711)
chr4 (2-217)||(23964269-23964487)
chr4 (1-228)||(37934735-37934964)
chr4 (2-227)||(42671712-42671939)
chr4 (5-229)||(37219671-37219904)
chr4 (5-196)||(30563255-30563448)
chr4 (1-225)||(24392709-24392942)
chr4 (3-229)||(11314044-11314255)
chr4 (2-117)||(36073650-36073765)
chr4 (5-226)||(44744481-44744698)
chr4 (151-223)||(33530676-33530749)
chr4 (161-227)||(25063369-25063436)
chr4 (151-223)||(10442777-10442850)
chr4 (151-223)||(31078807-31078880)
chr4 (151-223)||(49387876-49387949)
chr4 (151-223)||(2624841-2624914)
chr4 (31-104)||(9111337-9111410)
chr4 (151-223)||(21802310-21802383)
chr4 (151-223)||(22199265-22199338)
chr4 (151-223)||(24392671-24392744)
chr4 (151-223)||(36072951-36073024)
chr4 (151-223)||(46441848-46441921)
chr4 (151-223)||(47290070-47290143)
chr4 (151-223)||(53123034-53123108)
chr4 (151-223)||(24128243-24128316)
chr4 (135-227)||(36073256-36073349)
chr4 (151-223)||(36073354-36073427)
chr4 (151-223)||(44893430-44893503)
chr4 (1-36)||(21802156-21802191)
chr4 (1-35)||(11314088-11314122)
chr4 (151-197)||(17655461-17655507)
chr4 (151-196)||(9088902-9088947)
[»] chr7 (32 HSPs)
chr7 (1-228)||(48880721-48880950)
chr7 (1-228)||(45637754-45637982)
chr7 (2-229)||(3962022-3962250)
chr7 (2-227)||(30848612-30848839)
chr7 (2-227)||(24395015-24395241)
chr7 (1-228)||(42611853-42612082)
chr7 (1-229)||(15329315-15329546)
chr7 (2-227)||(34482878-34483108)
chr7 (1-225)||(4974532-4974758)
chr7 (2-227)||(25167651-25167872)
chr7 (1-229)||(15577640-15577873)
chr7 (2-228)||(42696126-42696355)
chr7 (2-226)||(37476876-37477102)
chr7 (1-225)||(20009895-20010120)
chr7 (2-218)||(29737182-29737406)
chr7 (1-115)||(35444600-35444714)
chr7 (2-229)||(18037021-18037249)
chr7 (127-228)||(35445567-35445668)
chr7 (1-228)||(15238424-15238655)
chr7 (127-227)||(35876414-35876514)
chr7 (2-118)||(36790372-36790488)
chr7 (1-103)||(40880713-40880815)
chr7 (151-223)||(4974723-4974796)
chr7 (151-223)||(42611815-42611888)
chr7 (151-223)||(45637716-45637789)
chr7 (154-223)||(15577841-15577911)
chr7 (151-223)||(15329277-15329350)
chr7 (151-223)||(48880915-48880988)
chr7 (151-196)||(15238414-15238459)
chr7 (151-223)||(35444562-35444635)
chr7 (161-227)||(40880641-40880706)
chr7 (163-227)||(36790271-36790336)
[»] chr2 (36 HSPs)
chr2 (2-227)||(33380250-33380477)
chr2 (2-227)||(35160800-35161029)
chr2 (1-227)||(23267857-23268085)
chr2 (2-227)||(10661930-10662158)
chr2 (1-227)||(7475303-7475531)
chr2 (1-227)||(9293370-9293599)
chr2 (2-223)||(3989119-3989342)
chr2 (1-224)||(31174633-31174857)
chr2 (1-229)||(13354888-13355120)
chr2 (1-186)||(21936123-21936311)
chr2 (1-228)||(43330954-43331183)
chr2 (2-227)||(9723448-9723677)
chr2 (2-225)||(21393483-21393710)
chr2 (1-187)||(14941199-14941389)
chr2 (1-118)||(27847674-27847791)
chr2 (1-108)||(22591524-22591631)
chr2 (16-196)||(16767288-16767480)
chr2 (127-229)||(22592880-22592985)
chr2 (31-229)||(40262529-40262729)
chr2 (137-229)||(34320961-34321042)
chr2 (151-223)||(14941354-14941427)
chr2 (182-227)||(39819272-39819317)
chr2 (1-75)||(37335755-37335829)
chr2 (151-223)||(9293564-9293637)
chr2 (151-223)||(21936085-21936158)
chr2 (151-223)||(23268050-23268123)
chr2 (151-215)||(31174822-31174887)
chr2 (151-223)||(43330916-43330989)
chr2 (137-206)||(37335824-37335894)
chr2 (151-215)||(27847644-27847709)
chr2 (1-37)||(22592905-22592941)
chr2 (1-36)||(9293411-9293446)
chr2 (2-36)||(9723600-9723634)
chr2 (151-223)||(7475496-7475569)
chr2 (151-215)||(13354858-13354923)
chr2 (197-229)||(27847801-27847833)
[»] chr3 (46 HSPs)
chr3 (1-229)||(3137207-3137437)
chr3 (1-229)||(6041926-6042149)
chr3 (5-229)||(22426138-22426363)
chr3 (1-229)||(33113835-33114066)
chr3 (2-227)||(37522096-37522323)
chr3 (2-229)||(3456107-3456336)
chr3 (2-229)||(37216846-37217075)
chr3 (2-227)||(2754760-2754989)
chr3 (2-227)||(3574321-3574549)
chr3 (2-227)||(3089460-3089689)
chr3 (2-229)||(48160948-48161178)
chr3 (2-227)||(19650695-19650922)
chr3 (2-225)||(33145755-33145980)
chr3 (2-226)||(8320378-8320606)
chr3 (2-229)||(36864825-36865049)
chr3 (5-227)||(42297909-42298122)
chr3 (1-227)||(47738147-47738382)
chr3 (5-118)||(30385057-30385170)
chr3 (1-229)||(8361832-8362068)
chr3 (127-229)||(34482681-34482783)
chr3 (2-215)||(33839574-33839794)
chr3 (2-118)||(42297396-42297513)
chr3 (1-108)||(34482826-34482933)
chr3 (1-227)||(9796824-9797052)
chr3 (31-229)||(40327897-40328104)
chr3 (87-227)||(30385529-30385670)
chr3 (1-212)||(41883031-41883246)
chr3 (2-118)||(11347311-11347427)
chr3 (15-227)||(24343603-24343820)
chr3 (1-228)||(41224275-41224505)
chr3 (5-226)||(46918948-46919164)
chr3 (127-227)||(26612916-26613017)
chr3 (127-225)||(42921295-42921394)
chr3 (2-85)||(42921186-42921269)
chr3 (151-223)||(3137402-3137475)
chr3 (151-223)||(6041888-6041961)
chr3 (151-215)||(9797017-9797082)
chr3 (151-196)||(8362033-8362078)
chr3 (1-36)||(8361875-8361910)
chr3 (1-64)||(26612827-26612890)
chr3 (1-36)||(33145906-33145941)
chr3 (1-36)||(36864869-36864904)
chr3 (1-36)||(40328025-40328060)
chr3 (151-223)||(34482898-34482971)
chr3 (151-196)||(41883211-41883256)
chr3 (151-215)||(47738117-47738182)
[»] scaffold0228 (6 HSPs)
scaffold0228 (1-229)||(25978-26208)
scaffold0228 (1-229)||(16026-16256)
scaffold0228 (1-158)||(8444-8603)
scaffold0228 (151-215)||(8414-8479)
scaffold0228 (151-215)||(15996-16061)
scaffold0228 (151-215)||(25948-26013)
[»] scaffold0085 (2 HSPs)
scaffold0085 (1-227)||(47892-48119)
scaffold0085 (151-223)||(47854-47927)
[»] chr6 (33 HSPs)
chr6 (1-229)||(33696738-33696969)
chr6 (1-227)||(17175816-17176044)
chr6 (1-229)||(32702247-32702477)
chr6 (1-227)||(33695121-33695350)
chr6 (2-229)||(17705262-17705487)
chr6 (1-227)||(18365369-18365596)
chr6 (1-227)||(18370633-18370860)
chr6 (1-229)||(28675190-28675420)
chr6 (2-229)||(23290874-23291106)
chr6 (2-227)||(2309218-2309445)
chr6 (2-225)||(6031537-6031763)
chr6 (1-225)||(11548386-11548611)
chr6 (2-186)||(6127318-6127506)
chr6 (1-158)||(9752110-9752268)
chr6 (1-118)||(25986972-25987089)
chr6 (2-182)||(8515567-8515747)
chr6 (70-189)||(18889477-18889597)
chr6 (63-229)||(29693542-29693718)
chr6 (151-223)||(33695315-33695388)
chr6 (151-223)||(33696700-33696773)
chr6 (161-226)||(34238883-34238948)
chr6 (149-227)||(582522-582602)
chr6 (151-221)||(11548576-11548647)
chr6 (161-223)||(25986934-25986997)
chr6 (151-223)||(17176009-17176082)
chr6 (151-223)||(18365561-18365634)
chr6 (151-223)||(18370825-18370898)
chr6 (151-223)||(28675152-28675225)
chr6 (151-223)||(18889685-18889757)
chr6 (177-227)||(2121004-2121055)
chr6 (1-36)||(28675342-28675377)
chr6 (151-196)||(9752233-9752278)
chr6 (1-38)||(18889683-18889720)
[»] scaffold0204 (1 HSPs)
scaffold0204 (2-227)||(4439-4666)
[»] scaffold0471 (2 HSPs)
scaffold0471 (1-225)||(12884-13110)
scaffold0471 (151-223)||(12846-12919)
[»] scaffold0178 (2 HSPs)
scaffold0178 (1-227)||(11663-11891)
scaffold0178 (151-223)||(11625-11698)
[»] scaffold0096 (2 HSPs)
scaffold0096 (1-227)||(41053-41280)
scaffold0096 (151-223)||(41015-41088)
[»] scaffold0665 (1 HSPs)
scaffold0665 (2-118)||(3111-3222)
[»] scaffold0041 (2 HSPs)
scaffold0041 (1-103)||(85468-85570)
scaffold0041 (161-227)||(85577-85642)


Alignment Details
Target: chr1 (Bit Score: 195; Significance: 1e-106; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 237 - 481
Target Start/End: Complemental strand, 17405911 - 17405671
Alignment:
Q  237 tatatattcctcattttcctagatcagattcaaattaggatattttccaagtttcgaaatggaatttatgttaagacatatcaaaacgacaagatttgta 336  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17405911 tatatattccccattttcctagatcagattcaaattaggatattttccaagtttcaaaatggaatttatgttaagacatatcaaaacgacaagatttgta 17405812  T
Q  337 atcaaaatcgaatcaagagcaaccttcctttgttttccccaaagagtgtacgtagtaagaattattaaattaacatgtggtttttccaccataatttttt 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17405811 atcaaaatcgaatcaagagcaaccttcctttgttttccccaaagagt----gtagtaagaattattaaattaacatgtgctttttccaccataatttttt 17405716  T
Q  437 ctcttagtatatatatttgtannnnnnnagctttacaagtataat 481  Q
    |||||||||||||||||||||       |||||||||||||||||    
T  17405715 ctcttagtatatatatttgtatttttttagctttacaagtataat 17405671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 19015446 - 19015675
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  19015446 caagaatgatatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatgg 19015545  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    |||||||| |||||||||          |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  19015546 ggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttat 19015645  T
Q  199 aaaatcattcttgatatctagcattttcct 228  Q
    ||||||||||||||||| ||||||||||||    
T  19015646 aaaatcattcttgatatgtagcattttcct 19015675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 6883529 - 6883757
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6883529 caagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatgg 6883628  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    |||||||| |||||||||          |||||||||||||||||||||||||||||||| ||||| |||| ||||| ||||||||||||||||||||||    
T  6883629 ggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgaatattatgccatgtcattcttgaatttttcttat 6883728  T
Q  199 aaaatcattcttgatatctagcattttcc 227  Q
    |||||||||||||||||||||||||||||    
T  6883729 aaaatcattcttgatatctagcattttcc 6883757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 36966731 - 36966501
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  36966731 caagaatgatatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtctggccggaaatcatgg 36966632  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    |||||||| |||||||||          |||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||    
T  36966631 ggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgttattcttgaatttttcttat 36966532  T
Q  199 aaaatcattcttgatatctagcattttcctt 229  Q
    |||||||||||||||||||||||||||||||    
T  36966531 aaaatcattcttgatatctagcattttcctt 36966501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 2 - 229
Target Start/End: Complemental strand, 41876464 - 41876235
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  41876464 aagaatgacatggcagaataatcacccttaggttttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccgaaaatcatggg 41876365  T
Q  102 gtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    ||||||| |||||||||          |||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||    
T  41876364 gtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttgaatttttcttata 41876265  T
Q  200 aaatcattcttgatatctagcattttcctt 229  Q
    ||||||||||||||||||||||||||||||    
T  41876264 aaatcattcttgatatctagcattttcctt 41876235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 37821857 - 37821629
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  37821857 caagaatgatatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccgaaaatcatgg 37821758  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    |||| ||| |||||||||          |||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  37821757 ggtgttgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttat 37821658  T
Q  199 aaaatcattcttgatatctagcattttcc 227  Q
    |||||||||||||||||||||||||||||    
T  37821657 aaaatcattcttgatatctagcattttcc 37821629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 40215030 - 40215257
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||    
T  40215030 caagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcagcctggccggaaatcatgg 40215129  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    |||||||| |||||||||          |||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||    
T  40215130 ggtggtgggtgttatgtattttttttttatgaaatattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttat 40215229  T
Q  199 aaaatcattcttgatatctagcattttc 226  Q
    ||||||||||||||||||||||||||||    
T  40215230 aaaatcattcttgatatctagcattttc 40215257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 2 - 229
Target Start/End: Original strand, 51737548 - 51737777
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||| | | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||    
T  51737548 aagaatgataaggcagaataatcacccttaaattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctgaccgaaaatcatggg 51737647  T
Q  102 gtggtggatgttatgtannnnnnnn--atgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    ||||||| |||||||||          |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  51737648 gtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttata 51737747  T
Q  200 aaatcattcttgatatctagcattttcctt 229  Q
    ||||||||||||||||||||||||||||||    
T  51737748 aaatcattcttgatatctagcattttcctt 51737777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 25463719 - 25463946
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||    
T  25463719 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcagcctggccggaaatcatggg 25463818  T
Q  102 gtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    ||||||| |||||||||          ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||| || |||||||||    
T  25463819 gtggtgggtgttatgtattttttttttatgaaagattaataaatgagacttaaatctaaaggtgattattgtgccatgtcattcttggatctttcttata 25463918  T
Q  200 aaatcattcttgatatctagcattttcc 227  Q
    ||||||||||||||||||||||||||||    
T  25463919 aaatcattcttgatatctagcattttcc 25463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 44094740 - 44094969
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| || ||||||||||||||    
T  44094740 caagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttagccaataaaatctcagtctggccggaaatcatgg 44094839  T
Q  101 ggtggtggatgttatgta-nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    |||||||| |||||||||         |||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||| || |||||||||    
T  44094840 ggtggtgggtgttatgtatttttctttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttata 44094939  T
Q  200 aaatcattcttgatatctagcattttcctt 229  Q
    |||| |||||||||||||||||||||||||    
T  44094940 aaataattcttgatatctagcattttcctt 44094969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 9910316 - 9910086
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||    
T  9910316 caagaatgacatggcagaataatcaaccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtatggccggaaatcatgg 9910217  T
Q  101 ggtggtggatgttatg----tannnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctt 196  Q
    |||||||| |||||||    |         ||||||||||||||||| || ||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  9910216 ggtggtgggtgttatgcatcttttttttttatgaaagattaataaataagtctgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 9910117  T
Q  197 ataaaatcattcttgatatctagcattttcc 227  Q
    |||||||||||||||||||||| ||||||||    
T  9910116 ataaaatcattcttgatatctaacattttcc 9910086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 25973456 - 25973677
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |    |||| |||||||||    
T  25973456 caagaatgacagg-cagaataatcacccttagattttatcaagaaataatcctgaaattaatgttagccaataaaatctctg----gccgaaaatcatgg 25973550  T
Q  101 ggtggtggatgttatgtannnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttataa 200  Q
    |||||||| |||||||||        |||||||||||||||||||||||||||| ||| ||||||||||||| || ||||||||||||||||||||||||    
T  25973551 ggtggtgggtgttatgtattttttttatgaaagattaataaatgagactgaaatttaaaggtgattattgtgtcatgtcattcttgaatttttcttataa 25973650  T
Q  201 aatcattcttgatatctagcattttcc 227  Q
    |||||||||||||||||||||||||||    
T  25973651 aatcattcttgatatctagcattttcc 25973677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 3559660 - 3559887
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||| | |||||||||||||    
T  3559660 aagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcagcctgggcggaaatcatggg 3559759  T
Q  102 gtggtggatgtt-atgta-nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    ||||||| |||| |||||         |||||||||||||||||||||||||||| ||| ||||||||||||| ||  ||||||||| || |||||||||    
T  3559760 gtggtgggtgttaatgtatttttttttatgaaagattaataaatgagactgaaatataaaggtgattattgtgtcatatcattcttggatctttcttata 3559859  T
Q  200 aaatcattcttgatatctagcattttcc 227  Q
    ||||||||||||||||||||||||||||    
T  3559860 aaatcattcttgatatctagcattttcc 3559887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 2 - 229
Target Start/End: Original strand, 18404485 - 18404720
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||  | | |||||||||| ||    
T  18404485 aagaatgacatggtagaataatcacctttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagtttggtcggaaatcatagg 18404584  T
Q  102 gtggtggatgttatgtannnnnnnn--------atgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaattttt 193  Q
    ||||||| |||||||||                ||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||| ||| |||    
T  18404585 gtggtgggtgttatgtattttttattttattttatgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttaaatcttt 18404684  T
Q  194 cttataaaatcattcttgatatctagcattttcctt 229  Q
    ||||||||||||||||||||||||||||||||||||    
T  18404685 cttataaaatcattcttgatatctagcattttcctt 18404720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 32 - 229
Target Start/End: Complemental strand, 20305123 - 20304923
Alignment:
Q  32 gattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggggtggtggatgttatgtannnnnnnn---at 128  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||| | |||| |||||||||| |||||| |||||||||           ||    
T  20305123 gattttatcaagaaataatcctgaaattaatgttagccaataaaatctcagcttggccgaaaatcatgggatggtgggtgttatgtatttttttttttat 20305024  T
Q  129 gaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 228  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20305023 gaaagattgataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 20304924  T
Q  229 t 229  Q
    |    
T  20304923 t 20304923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 32000290 - 32000061
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||| ||||||||||||  | | |||||||||||||||    
T  32000290 caagaatgacatgacagaataaccacccttagattttatcaagaaattgtactgaaattaatgttagccaataaaatctatgtcgagccggaaatcatgg 32000191  T
Q  101 ggtggtggatgttatgta-----nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttct 195  Q
    |||||||| |||||||||             |||||  || |||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||    
T  32000190 ggtggtgggtgttatgtattttttattttttatgaa--atgaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttct 32000093  T
Q  196 tataaaatcattcttgatatctagcattttcc 227  Q
    |   ||||||||||||||||||||||||||||    
T  32000092 tgataaatcattcttgatatctagcattttcc 32000061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 33786658 - 33786424
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| || |||||||||||||| ||||||||||||||| || ||||||||||||||| ||||||||||||| | |  ||||||||||||||    
T  33786658 caagaatgacatggcacaataatcacccttaaattttatcaagaaattgtactgaaattaatgttagccaataaaatctctgtcgggccggaaatcatgg 33786559  T
Q  101 ggtggtggatgttatg--------tannnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttt 192  Q
    ||||||||||||||||        |         |||||||   |||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||    
T  33786558 ggtggtggatgttatgcattttttttttttttttatgaaag--gaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctt 33786461  T
Q  193 tcttataaaatcattcttgatatctagcattttcctt 229  Q
    ||||   ||||||||||||||||||||||||||||||    
T  33786460 tcttgataaatcattcttgatatctagcattttcctt 33786424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 2 - 229
Target Start/End: Complemental strand, 27523277 - 27523048
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||| ||| |||||||||||||||    
T  27523277 aagaatgacatgacagaataatcacccttaaattttatcaagaaattgtcccgaaattaatgttagccaataaaatctcatcctggccggaaatcatggg 27523178  T
Q  102 gtggtggatgttatgta-nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ata 199  Q
    ||| ||| |||||||||         ||||||  ||||||||| ||||| ||||| || |||||||| | |||||    |||||||||| |||||| |||    
T  27523177 gtgatgggtgttatgtatttttttttatgaaaagttaataaataagactaaaatcaaagggtgattaatctgccatacgattcttgaatctttcttgata 27523078  T
Q  200 aaatcattcttgatatctagcattttcctt 229  Q
    |||||||||||||||| || ||||||||||    
T  27523077 aaatcattcttgatatataacattttcctt 27523048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 40273744 - 40273976
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| || |||||||||||||||||||||| ||||||| || ||||||||||||||| ||||||||||||| | |  ||||||||||||||    
T  40273744 caagaatgacatgtcaaaataatcacccttagattttattaagaaattgtactgaaattaatgttagccaataaaatctctgtcgggccggaaatcatgg 40273843  T
Q  101 ggtggtggatgttatgta----------nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatt 190  Q
    |||||||| |||||||||                  |||||||   |||||||||||||||||||||| |||||||||||||||| |||||||||||||     
T  40273844 ggtggtgggtgttatgtattatttttttttttttttatgaaag--gaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaata 40273941  T
Q  191 tttcttataaaatcattcttgatatctagcatttt 225  Q
    ||||||   ||||||||||||||||||||||||||    
T  40273942 tttcttgataaatcattcttgatatctagcatttt 40273976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 44691052 - 44690818
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||| ||||| ||||||||| || ||||||||||||||||||||  |||  |||||||||||| ||||||||||||||| || ||||||||||||||    
T  44691052 caagaattacatggcagaataataactcttagattttatcaagaaattatcccaaaattaatgttagccaataaaatctcagtctggccggaaatcatgg 44690953  T
Q  101 ggtggtggatgttatgta---------nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaattt 191  Q
    |||| ||| |||||||||                 || |||||||||||||| |||||| ||||||| |||||||||| ||||| ||||||||||||| |    
T  44690952 ggtgttgggtgttatgtatttattttttattttttataaaagattaataaataagactggaatctaagggtgattattctgccatgtcattcttgaatct 44690853  T
Q  192 ttctt-ataaaatcattcttgatatctagcatttt 225  Q
    ||||| ||||||||||| |||||||||| ||||||    
T  44690852 ttcttgataaaatcattattgatatctaacatttt 44690818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 16045821 - 16045746
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaa 76  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||    
T  16045821 caagaatgacatggcagaataatcacccttagattttatcaagaaatattcttgaaattaatgttagccaataaaa 16045746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 19722970 - 19722894
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 227  Q
    |||||||| ||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  19722970 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 19722894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 2 - 229
Target Start/End: Original strand, 10167443 - 10167672
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    ||||||||||||| ||||||||||   |||||||||||||| |||| ||| | |||||||||||| |||||||||| |  | ||  |||||||| ||||     
T  10167443 aagaatgacatgatagaataatcatttttagattttatcaaaaaattgtctttaaattaatgttagccaataaaattttggtctgaccggaaattatggt 10167542  T
Q  102 gtggtggatgttatgtannnnnnnn-atgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaat-ttttcttata 199  Q
     |||||  |||| ||||         |||||| |||||||||| |||||||||||||| ||||||||||||  ||  | |||||| ||| |||| |||||    
T  10167543 ttggtgtgtgttgtgtatttttttttatgaaaaattaataaataagactgaaatctaaaggtgattattgtatcatattattcttaaatatttttttata 10167642  T
Q  200 aaatcattcttgatatctagcattttcctt 229  Q
    ||||||||||| |||| || ||||||||||    
T  10167643 aaatcattcttaatatgtaacattttcctt 10167672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 52329345 - 52329427
Alignment:
Q  35 tttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggggtggtggatgttatgta 118  Q
    |||||||||||| ||| | |||||||||||||||||||||||||||||||| ||| |||||||| ||||||| | |||||||||    
T  52329345 tttatcaagaaagagttccgaaattaatgttaaccaataaaatctcagcctggccagaaatcat-gggtggtaggtgttatgta 52329427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 118
Target Start/End: Original strand, 51621002 - 51621085
Alignment:
Q  31 agattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggggtggtggatgttatgta 118  Q
    ||||||||| |||||||||||| |||||||||||||  ||||||||||||||      ||||||||||||||||||||||||||||||    
T  51621002 agattttattaagaaatagtccagaaattaatgttagtcaataaaatctcag----atcggaaatcatggggtggtggatgttatgta 51621085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 33786623 - 33786696
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttcttataaaatcattcttgatatctagcattt 224  Q
    |||| ||| |||||||||||||||| ||||||||||||| ||||||   |||||||||||||||||||||||||    
T  33786623 aaatttaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattt 33786696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 16045786 - 16045859
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  16045786 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 16045859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 40215065 - 40214992
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  40215065 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 40214992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 40273779 - 40273706
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| || || |||||||||||||||||||| | |||||| ||||||||||||||||||    
T  40273779 aaatctaagggtgattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctagcatt 40273706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 34519815 - 34519874
Alignment:
Q  16 agaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaa 75  Q
    |||||||||  |||||||||||||||| |||| |||||||||||||||||| ||||||||    
T  34519815 agaataatcgaccttagattttatcaaaaaattgtcctgaaattaatgttagccaataaa 34519874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 44094775 - 44094702
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||| |||||||  |||||||||| |||||||    
T  44094775 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 44094702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 52064445 - 52064373
Alignment:
Q  155 ctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttc 226  Q
    |||| ||||| |||| || || ||||||||||||| |||||| ||||||||||| ||||||||||||||||||    
T  52064445 ctaagggtgaatattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatatctagcattttc 52064373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 6883564 - 6883491
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||| | |||||| ||||| |||| |||||||    
T  6883564 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaaaaaaatctttcttaatatatagcatt 6883491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 9910281 - 9910354
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| | |||||||| ||||| |||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  9910281 aaatctaaggttgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 9910354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 19015481 - 19015408
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| |||||  ||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  19015481 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 19015408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 32000255 - 32000328
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||| ||||| || || |||||||||||||||||||| | |||||| |||||||||| |||||||    
T  32000255 aaatctaagggtggttattctgtcatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcatt 32000328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 36966696 - 36966769
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| |||||  ||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  36966696 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 36966769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 37821822 - 37821895
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| |||||  ||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  37821822 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 37821895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 44690858 - 44690892
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagatt 35  Q
    ||||||||||||| |||||||||||||||||||||    
T  44690858 caagaatgacatggcagaataatcacccttagatt 44690892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 52329445 - 52329507
Alignment:
Q  127 atgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaat 189  Q
    ||||||  ||||||| | |||||||||||||| |||||||||| ||| | |||||||||||||    
T  52329445 atgaaacgttaataattaagactgaaatctaagggtgattattctgctatgtcattcttgaat 52329507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 7335449 - 7335521
Alignment:
Q  34 ttttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggggtggt 106  Q
    |||||||| |||||||||  ||||||||  ||| ||||||||||||| |  | ||||||||| ||||||||||    
T  7335449 ttttatcacgaaatagtctcgaaattaaaattagccaataaaatctctgtatggccggaaattatggggtggt 7335521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 179; Significance: 2e-96; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 40780152 - 40779923
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  40780152 caagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatgg 40780053  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    ||||||||||||||||||          |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  40780052 ggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttat 40779953  T
Q  199 aaaatcattcttgatatctagcattttcct 228  Q
    ||||||||||||||||||||||||||||||    
T  40779952 aaaatcattcttgatatctagcattttcct 40779923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 17841873 - 17841645
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  17841873 caagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatgg 17841774  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    |||||||| |||||||||          |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  17841773 ggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttat 17841674  T
Q  199 aaaatcattcttgatatctagcattttcc 227  Q
    |||||||||||||||||||||||||||||    
T  17841673 aaaatcattcttgatatctagcattttcc 17841645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 2 - 227
Target Start/End: Complemental strand, 6108255 - 6108028
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  6108255 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggg 6108156  T
Q  102 gtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    ||||||| |||||||||          |||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||    
T  6108155 gtggtgggtgttatgtatcttctttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttata 6108056  T
Q  200 aaatcattcttgatatctagcattttcc 227  Q
    ||||||||||||||||||||||||||||    
T  6108055 aaatcattcttgatatctagcattttcc 6108028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 26042139 - 26041907
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagatttt---atcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatca 97  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  26042139 caagaatgacatgacagaataatcacccttagatttttttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctgaccggaaatca 26042040  T
Q  98 tggggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttct 195  Q
    ||||||||||| |||||||||          |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  26042039 tggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttct 26041940  T
Q  196 tataaaatcattcttgatatctagcattttcct 228  Q
    |||||||||||||||||||||||||||||||||    
T  26041939 tataaaatcattcttgatatctagcattttcct 26041907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 20091824 - 20091598
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20091824 caagaatgacatggcagaataatcacccttagattttatcaagaaatcgtcctgaaattaatgttagccaataaaatctcagcctagccggaaatcatgg 20091725  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    |||||||| |||||||||          ||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||    
T  20091724 ggtggtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttat 20091625  T
Q  199 aaaatcattcttgatatctagcatttt 225  Q
    |||||||||||||||||||||||||||    
T  20091624 aaaatcattcttgatatctagcatttt 20091598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 3597064 - 3596836
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  3597064 caagaatgacatggcagaataattacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctgaccggaaatcatgg 3596965  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    |||||||| |||||||||          |||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||| ||||||||||||    
T  3596964 ggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttcttat 3596865  T
Q  199 aaaatcattcttgatatctagcattttcc 227  Q
    |||||||||||||||||||||||||||||    
T  3596864 aaaatcattcttgatatctagcattttcc 3596836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 2 - 228
Target Start/End: Complemental strand, 37986077 - 37985850
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| || |||||||||||||||    
T  37986077 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgctagccaataaaatctcagtctggccggaaatcatggg 37985978  T
Q  102 gtggtggatgttatgta-nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttataa 200  Q
    ||||||| |||||||||         |||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  37985977 gtggtgggtgttatgtatttttttttatgaaagattaataaatgggactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataa 37985878  T
Q  201 aatcattcttgatatctagcattttcct 228  Q
    ||||||||||||||||||||||||||||    
T  37985877 aatcattcttgatatctagcattttcct 37985850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 25581262 - 25581034
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  25581262 caagaatgacatggcaaaataatcacctttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctgaccggaaatcatgg 25581163  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    |||||||| |||||||||          |||||||||||||||||||||||||||||||| |||||||||||||  | ||||||||||||||||||||||    
T  25581162 ggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttat 25581063  T
Q  199 aaaatcattcttgatatctagcattttcc 227  Q
    |||||||||||||||||||||||||||||    
T  25581062 aaaatcattcttgatatctagcattttcc 25581034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 42755065 - 42754837
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||    
T  42755065 caagaatgacatggcagaataatcacccttagattttatcaagaaatagtcatgaaattaatgttaaccaataaaatctcagcctggccgaaaatcatgg 42754966  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    | |||||| |||||||||          |||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||| ||||||||||||    
T  42754965 gatggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttaaatttttcttat 42754866  T
Q  199 aaaatcattcttgatatctagcattttcc 227  Q
    |||||||||||||||||||||||||||||    
T  42754865 aaaatcattcttgatatctagcattttcc 42754837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 32064787 - 32065017
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  32064787 caagaatgacatggcagaataatcacccttagattttatcaagaaataattctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatgg 32064886  T
Q  101 ggtggtggatgttatgta---nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctta 197  Q
    | || ||| |||||||||           |||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||||    
T  32064887 gctgatgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttaaatttttctta 32064986  T
Q  198 taaaatcattcttgatatctagcattttcct 228  Q
    |||||||||||||||||||||||||||||||    
T  32064987 taaaatcattcttgatatctagcattttcct 32065017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 34665424 - 34665649
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| | |||| |||||||||    
T  34665424 caagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcttggccgaaaatcatgg 34665523  T
Q  101 ggtggtggatgttatgta-nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
     ||||||| |||||||||         ||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||    
T  34665524 agtggtgggtgttatgtatttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttata 34665623  T
Q  200 aaatcattcttgatatctagcatttt 225  Q
    ||||||||||||||||||||||||||    
T  34665624 aaatcattcttgatatctagcatttt 34665649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 2 - 229
Target Start/End: Complemental strand, 1645987 - 1645757
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||| | |||||||||||||    
T  1645987 aagaaagacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagctaataaaatctcagcctggtcggaaatcatggg 1645888  T
Q  102 gtggtggatgttatgta---nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    ||||||| |||||||||           |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  | ||||||||    
T  1645887 gtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggttctttcttat 1645788  T
Q  199 aaaatcattcttgatatctagcattttcctt 229  Q
    |||||||||||||||||||||||||||||||    
T  1645787 aaaatcattcttgatatctagcattttcctt 1645757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 15187602 - 15187831
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctc-agcctagccggaaatcatg 99  Q
    ||||||||| ||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||| |||||||||||||    
T  15187602 caagaatgatatggcagaataattacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatctctagcctggccggaaatcatg 15187701  T
Q  100 gggtggtggatgttatgtannnnnnnn-atgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    | ||||||| |||||||||         |||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||| || ||||||||    
T  15187702 gagtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttat 15187801  T
Q  199 aaaatcattcttgatatctagcattttcct 228  Q
    ||||||||||||||||||||||||||||||    
T  15187802 aaaatcattcttgatatctagcattttcct 15187831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 2 - 215
Target Start/End: Original strand, 35353084 - 35353299
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||| |    
T  35353084 aagaatgacatggcagaataatcacccttagattttatcaagaaataatcatgaaattaatgttaaccaataaaatctcagcctggccggaaatcatgag 35353183  T
Q  102 gtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    ||||||| |||||||||          ||||||||||||||||||||| | |||| ||| |||||||||||||||| |||||||||||||||||||||||    
T  35353184 gtggtgggtgttatgtatcttttttttatgaaagattaataaatgagattaaaatttaaaggtgattattgtgccatgtcattcttgaatttttcttata 35353283  T
Q  200 aaatcattcttgatat 215  Q
    ||||||||||||||||    
T  35353284 aaatcattcttgatat 35353299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 2 - 226
Target Start/End: Original strand, 14128907 - 14129128
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |     ||||||| ||    
T  14128907 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcagccga-----aaatcatagg 14129001  T
Q  102 gtggtggatgttatgtannnnnnnn--atgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    ||||||| |||||||||          |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||    
T  14129002 gtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatatttcttata 14129101  T
Q  200 aaatcattcttgatatctagcattttc 226  Q
    |||||||||||||||||||||||||||    
T  14129102 aaatcattcttgatatctagcattttc 14129128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 8453876 - 8454078
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||| ||||||||| ||||    
T  8453876 caagaatgacatgacaaaataatcacccttagattttatcaagaaatagtcctgaaattaatgtaacacaataaaatctcagcctggccggaaattatgg 8453975  T
Q  101 ggtggtggatgttatgta-nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
     ||||||| |||||||||         |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  8453976 tgtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaattcttcttata 8454075  T
Q  200 aaa 202  Q
    |||    
T  8454076 aaa 8454078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 2 - 215
Target Start/End: Original strand, 32393901 - 32394114
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||| ||||||||||    
T  32393901 aagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcagtctagccgaaaatcatggg 32394000  T
Q  102 gtggtggatgttatgta-nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttataa 200  Q
    ||||| | |||||||||         |||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||| ||| ||| ||||||    
T  32394001 gtggtaggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtg-catgtcattcttaaatattttttataa 32394099  T
Q  201 aatcattcttgatat 215  Q
    |||||||||||||||    
T  32394100 aatcattcttgatat 32394114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 39772824 - 39772608
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||    
T  39772824 caagaatgacatggcagaataatcacccttagattttatcaaaaaatagtcttgaaattaatgttagccaataaaatctcagcc-agccggaaatcatgg 39772726  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    | |||||| |||||||||          |||||||||||||||| || |||||||||||| ||||||||||||| || |||||||||| || ||||||||    
T  39772725 gatggtgggtgttatgtattttttttttatgaaagattaataaacgaaactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttat 39772626  T
Q  199 aaaatcattcttgatatc 216  Q
    ||||||||||||||||||    
T  39772625 aaaatcattcttgatatc 39772608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 6 - 227
Target Start/End: Original strand, 10044390 - 10044618
Alignment:
Q  6 atgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggggtgg 105  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||  || ||||||||||| ||||||||||||||  || | |||||||||||| ||||    
T  10044390 atgacatgacagaataatcatccttaaattttatcaagaaatagttttggaattaatgttagccaataaaatctcaatctggtcggaaatcatggagtgg 10044489  T
Q  106 tggatgttatgtannnnnnnn-------atgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    ||| |||||||||               ||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||| ||||||||    
T  10044490 tggttgttatgtatttttttttttttttatgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttat 10044589  T
Q  199 aaaatcattcttgatatctagcattttcc 227  Q
    |||||||||||||||||||||||||||||    
T  10044590 aaaatcattcttgatatctagcattttcc 10044618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 31347805 - 31347569
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| | |  ||| ||||||||||    
T  31347805 caagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctctgtcgggccagaaatcatgg 31347706  T
Q  101 ggtggtggatgttatgta-----nnnnnnnnatgaaa-gattaa--taaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttt 192  Q
    ||| |||| |||||||||             |||||| || |||  |||||||||||||||||||| |||||||||||||||| ||||||||||||| ||    
T  31347705 ggtagtgggtgttatgtatttttttttttttatgaaaggaataaattaaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctt 31347606  T
Q  193 tcttataaaatcattcttgatatctagcattttcctt 229  Q
    ||||   ||||||||||||||||||||||||||||||    
T  31347605 tcttgataaatcattcttgatatctagcattttcctt 31347569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 24211576 - 24211459
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    |||||||| |||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24211576 caagaatggcatggcagaataatcacccttaaattttatcaagaaatagtcttgaaattaatgttaaccaataaaatctcagcctggccggaaatcatgg 24211477  T
Q  101 ggtggtggatgttatgta 118  Q
    |||||||| |||||||||    
T  24211476 ggtggtgggtgttatgta 24211459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 57 - 227
Target Start/End: Original strand, 30055615 - 30055786
Alignment:
Q  57 attaatgttaaccaataaaatctcagcctagccggaaatcatggggtggtggatgttatgtannnnnnnn--atgaaagattaataaatgagactgaaat 154  Q
    |||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||          ||||||| ||||||||||||||| ||||    
T  30055615 attaatgttagccaataaaatctcagc-tggccggaaatcatggggtggtggatgttatgtattttttttttatgaaaggttaataaatgagactaaaat 30055713  T
Q  155 ctaacggtgattattgtgccacgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 227  Q
    |||| ||||||||||||| || ||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  30055714 ctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcc 30055786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 24844881 - 24844655
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||| |||    ||||||||| |    
T  24844881 caagaatgacatgaca-aataatcacccttagattttatcaagaaattgtcccgaaattaatgttagccaataaaatctcatcctgattggaaatcatag 24844783  T
Q  101 ggtggtggatgttatgtannnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ata 199  Q
    |||||||| |||||||||        ||||||| ||||||| | ||| | ||||||||  ||||||||| ||||| | ||||||| ||| |||||| |||    
T  24844782 ggtggtgggtgttatgtattttttttatgaaaggttaataattaagattaaaatctaagagtgattattttgccatgccattcttaaatctttcttgata 24844683  T
Q  200 aaatcattcttgatatctagcattttcc 227  Q
    |||||||| |||||||||| ||||||||    
T  24844682 aaatcattattgatatctaacattttcc 24844655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 72 - 225
Target Start/End: Original strand, 38017047 - 38017201
Alignment:
Q  72 taaaatctcagcctagccggaaatcatggggtggtggatgttatgtannnnnnnnatgaaagattaataaatgagactgaaatctaacggtga-ttattg 170  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||         ||||||||||||||||||||||||||||||| ||| | ||||||    
T  38017047 taaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttgaaagattaataaatgagactgaaatctaaaggtaaattattg 38017146  T
Q  171 tgccacgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 225  Q
    || || ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38017147 tgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 38017201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 1503732 - 1503637
Alignment:
Q  133 gattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 228  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1503732 gattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 1503637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 3890639 - 3890412
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||| |||  ||||||||||||| |||||||||||||| | | || | |||||||||    
T  3890639 caagaatgacatggcagaataatcacc-ttagattttatcaagaaattgtctcgaaattaatgttagccaataaaatctcatcatggctgaaaatcatgg 3890541  T
Q  101 ggtggtggatgttatgtannnnnnnnatga----aagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctt 196  Q
    |||||||| |||||||||        || |    ||| ||||||||| ||| | |||||||| |||||||||| |||||  |||||||||||| ||||||    
T  3890540 ggtggtgggtgttatgtattttttttataaaattaaggttaataaataagattaaaatctaatggtgattattctgccatatcattcttgaatctttctt 3890441  T
Q  197 -ataaaatcattcttgatatctagcattt 224  Q
     ||||||||||||||||||||||||||||    
T  3890440 gataaaatcattcttgatatctagcattt 3890412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 7022020 - 7022251
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||| || | ||||||||||||| ||||||||||||  | |  ||||||||||||||    
T  7022020 caagaatgatatggcagaataatcacccttagattttatcaagaaattgtaccgaaattaatgttagccaataaaatctatgtcgggccggaaatcatgg 7022119  T
Q  101 ggtggtggatgttatgta-----nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttct 195  Q
    |||||||| |||||||||             |||||||   |||||||||||||||||||||| || |||||||||| |  ||||||||||||| |||||    
T  7022120 ggtggtgggtgttatgtatttttttttttttatgaaag--gaataaatgagactgaaatctaagggcgattattgtgacttgtcattcttgaatctttct 7022217  T
Q  196 tataaaatcattcttgatatctagcattttcctt 229  Q
    |   |||||||| |||||||||||||||||||||    
T  7022218 tgataaatcattgttgatatctagcattttcctt 7022251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 2 - 196
Target Start/End: Complemental strand, 41819800 - 41819594
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||  |||||||||||||||    
T  41819800 aagaatgatatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcccggccggaaatcatggg 41819701  T
Q  102 gtggtggatgttatgta------------nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaat 189  Q
    ||||||  |||||||||                    |||| || |||||||||||||||||||||||| ||||||||||||| || |||||||||||||    
T  41819700 gtggtgtgtgttatgtattttttttttttttttttttatgataggttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaat 41819601  T
Q  190 ttttctt 196  Q
     ||||||    
T  41819600 ctttctt 41819594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 24211267 - 24211169
Alignment:
Q  127 atgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 225  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||    
T  24211267 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcatttt 24211169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 30835070 - 30834849
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||  |||||||||||||        |||||||||||    
T  30835070 caagaatgacatggcagaataatcaccctttgattttatcaagaaattgtcctgaaattaatgttagtcaataaaatctca--------ggaaatcatgg 30834979  T
Q  101 ggtggtggatgttatgta-nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctt-at 198  Q
    |||||||| |||||||||         || |||  || | |||| | |||||||||||| |||| ||||| || || ||||||||| ||| |||||| ||    
T  30834978 ggtggtgggtgttatgtattttattttatcaaaagttgaaaaataacactgaaatctaagggtggttattctgtcatgtcattctttaatctttcttgat 30834879  T
Q  199 aaaatcattcttgatatctagcattttcct 228  Q
    |||||||||||||||||||| |||||||||    
T  30834878 aaaatcattcttgatatctatcattttcct 30834849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 7017888 - 7017771
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||| || || |||||||||||| ||||||||||||| | |  ||||||||||||||    
T  7017888 caagaatgacatggcagaataatcatccttagattttatcaagaaattgtactaaaattaatgttagccaataaaatctctgtcgggccggaaatcatgg 7017789  T
Q  101 ggtggtggatgttatgta 118  Q
    |||||||| |||||||||    
T  7017788 ggtggtgggtgttatgta 7017771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 27782136 - 27782027
Alignment:
Q  5 aatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggggtg 104  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||| || || |||||||||||| |||||    
T  27782136 aatgacatggcagaataatcacccttagattttatcaagaaattgtcttgaaattaatgttagccaataaaatcttagtctggccggaaatcattgggtg 27782037  T
Q  105 gtggatgtta 114  Q
    |||| |||||    
T  27782036 gtgggtgtta 27782027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 27835476 - 27835303
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    |||||||||||||  | |||||||| ||||||||||||| || |||| ||| | |||||||||||| |||||||||||||||||||| ||||||||||||    
T  27835476 caagaatgacatggtaaaataatcatccttagattttattaaaaaattgtcttcaaattaatgttagccaataaaatctcagcctagacggaaatcatgg 27835377  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtg 172  Q
    | |||||| |||||||||          || |||| ||||||||||||| |||||||||| | |||||||||||    
T  27835376 gatggtgggtgttatgtatttttgttttataaaaggttaataaatgagattgaaatctaaggatgattattgtg 27835303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 15972899 - 15972816
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcct 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||| |||||||||||| |||||    
T  15972899 aagaatgacatgacagaataatcacccttagattttatcaagaaattgttctgaatttaatgttagccaataaaatctaagcct 15972816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 128 - 225
Target Start/End: Complemental strand, 37132575 - 37132477
Alignment:
Q  128 tgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 225  Q
    |||||| ||||||||| |||||||||||||| ||||||||||||| || ||||||| ||||| |||||| |||||||||||||||||||||||||||||    
T  37132575 tgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatatctagcatttt 37132477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 229
Target Start/End: Complemental strand, 7017743 - 7017651
Alignment:
Q  137 aataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctt 229  Q
    |||||||||||||||||||||| | |||||||| |   | ||||||||| ||| ||||||   ||||||||||||||||||||||||||||||    
T  7017743 aataaatgagactgaaatctaaggatgattattataaaatgtcattcttaaatatttcttgataaatcattcttgatatctagcattttcctt 7017651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 32064822 - 32064749
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  32064822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 32064749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 34665459 - 34665386
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  34665459 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 34665386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 17841838 - 17841911
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  17841838 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 17841911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 20091789 - 20091862
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||| |||||||  |||||||||| |||||||    
T  20091789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 20091862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 31347770 - 31347843
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| |||||||||||||||||||| | |||||  |||||||||| |||||||    
T  31347770 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatatttcttgatatatagcatt 31347843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 40780117 - 40780190
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  40780117 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 40780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 42755030 - 42755095
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatat 215  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||| |||||||| ||||||||||    
T  42755030 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 42755095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 1886621 - 1886672
Alignment:
Q  165 ttattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatat 215  Q
    ||||| ||||||||||||||||||| |||||| |||||||||||||||||||    
T  1886621 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 1886672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 3817953 - 3817914
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatc 40  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  3817953 caagaattacatgacagaataatcacccttagattttatc 3817914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 24844847 - 24844920
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 224  Q
    |||||||| |||||||||| || || |||||||||||||||||||| |||||||  |||||||||| ||||||||    
T  24844847 aaatctaagggtgattatt-tgtcatgtcattcttgaatttttcttaataaaatatttcttgatatgtagcattt 24844920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 7017853 - 7017926
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| | |||||||| ||||| |||||||||||||||||||| | |||||| ||| |||||| |||||||    
T  7017853 aaatctaaggatgattattctgccatgtcattcttgaatttttcttaagaaaatctttcatgatatatagcatt 7017926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 7022055 - 7021990
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatat 215  Q
    |||||||| |||||||||| |||||  ||||||||||||||||||| | |||||| ||||||||||    
T  7022055 aaatctaagggtgattattctgccatatcattcttgaatttttcttgagaaaatctttcttgatat 7021990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 8453911 - 8453838
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| || || |||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  8453911 aaatctaagggtgattattttgtcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 8453838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 15187637 - 15187564
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| ||| |||||| |||||  ||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  15187637 aaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15187564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 26042104 - 26042177
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| || || |||||||||||| ||||||| |||||||| ||||| |||| |||||||    
T  26042104 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatatatagcatt 26042177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 30055745 - 30055708
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagatttta 38  Q
    |||||||||||||||| |||||||||||||||||||||    
T  30055745 caagaatgacatgacacaataatcacccttagatttta 30055708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 222
Target Start/End: Original strand, 25581227 - 25581299
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcat 222  Q
    |||||||| |||||||||| ||||| |||||||||||| |||||||  ||||| | |||||||||| ||||||    
T  25581227 aaatctaaaggtgattattttgccatgtcattcttgaaattttcttcgtaaaaactttcttgatatatagcat 25581299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 30835035 - 30835099
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttcttataaaatcattcttgatat 215  Q
    ||||| || |||||||||| ||||| |||||||||||||||||   |||||||| ||||||||||    
T  30835035 aaatcaaagggtgattattctgccatgtcattcttgaattttttcgataaaatctttcttgatat 30835099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 38017039 - 38016983
Alignment:
Q  160 ggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatat 215  Q
    |||||||||| ||||| |||||||||||| ||||||| |||||||| ||||||||||    
T  38017039 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 38016983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 118
Target Start/End: Original strand, 30797114 - 30797200
Alignment:
Q  31 agattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggggtggtggatgttatgta 118  Q
    ||||||||| || ||||||||  |||||| |||||| |||||||||| ||  |||| ||||||||||| ||||||||| | |||||||    
T  30797114 agattttattaaaaaatagtctcgaaattgatgttagccaataaaatttctccctaaccggaaatcat-gggtggtgggtcttatgta 30797200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 41819604 - 41819639
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattt 36  Q
    |||||||||||||||| |||||||||||||||||||    
T  41819604 caagaatgacatgacacaataatcacccttagattt 41819639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 30834893 - 30834927
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattt 36  Q
    ||||||||||||||||||||| |||||||||||||    
T  30834893 aagaatgacatgacagaataaccacccttagattt 30834927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 107
Target Start/End: Complemental strand, 37132647 - 37132593
Alignment:
Q  53 tgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggggtggtg 107  Q
    |||||||||||||| ||||||||||||||| ||    ||||||||||||||||||    
T  37132647 tgaaattaatgttagccaataaaatctcagtctgattggaaatcatggggtggtg 37132593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 196
Target Start/End: Original strand, 3890605 - 3890649
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt 196  Q
    |||||||| |||||||||| ||||| ||||||||||||||||||||    
T  3890605 aaatctaa-ggtgattattctgccatgtcattcttgaatttttctt 3890649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 27835441 - 27835514
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| | |||||||| | ||| |||||||||||||||||||| |||| ||| || ||||||| |||||||    
T  27835441 aaatctaaggatgattattttaccatgtcattcttgaatttttcttaataagatctttattgatatatagcatt 27835514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 39772789 - 39772854
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttg-aatttttcttataaaatcattcttgatat 215  Q
    |||||||| |||||||||| ||||| |||||||||| ||||||| | |||||||  ||||||||||    
T  39772789 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatatttcttgatat 39772854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 37132520 - 37132552
Alignment:
Q  4 gaatgacatgacagaataatcacccttagattt 36  Q
    ||||||||||||| |||||||||||||||||||    
T  37132520 gaatgacatgacacaataatcacccttagattt 37132552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 174; Significance: 2e-93; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 2 - 228
Target Start/End: Original strand, 4892245 - 4892473
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4892245 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggg 4892344  T
Q  102 gtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    ||||||| |||||||||          |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  4892345 gtggtgggtgttatgtatcttcttttaatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttata 4892444  T
Q  200 aaatcattcttgatatctagcattttcct 228  Q
    |||||||||||||||||||||||||||||    
T  4892445 aaatcattcttgatatctagcattttcct 4892473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 2 - 229
Target Start/End: Original strand, 25398281 - 25398510
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25398281 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggg 25398380  T
Q  102 gtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    ||||||| |||||||||          |||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||    
T  25398381 gtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattgttgaatttttcttata 25398480  T
Q  200 aaatcattcttgatatctagcattttcctt 229  Q
    ||||||||||||||||||||||||||||||    
T  25398481 aaatcattcttgatatctagcattttcctt 25398510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 2 - 227
Target Start/End: Complemental strand, 33584351 - 33584124
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33584351 aagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggg 33584252  T
Q  102 gtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    ||||||| |||||||||          |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  33584251 gtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttata 33584152  T
Q  200 aaatcattcttgatatctagcattttcc 227  Q
    ||||||||||||||||||||||||||||    
T  33584151 aaatcattcttgatatctagcattttcc 33584124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 5 - 224
Target Start/End: Original strand, 12850847 - 12851069
Alignment:
Q  5 aatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggggtg 104  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12850847 aatgacatggcagaataaccacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggggtg 12850946  T
Q  105 gtggatgttatgta---nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttataaa 201  Q
    |||| |||||||||           |||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||    
T  12850947 gtgggtgttatgtattttcttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttcttataaa 12851046  T
Q  202 atcattcttgatatctagcattt 224  Q
    |||||||||||||||||||||||    
T  12851047 atcattcttgatatctagcattt 12851069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 6043534 - 6043307
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  6043534 caagaatgacatggaagaataatcacccttagattttatcaagaaatagtgctgaaattaatattaaccaataaaatctcagcctggccggaaatcatgg 6043435  T
Q  101 ggtggtggatgttatgta-nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    |||| ||| |||||||||         |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||    
T  6043434 ggtgttgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttata 6043335  T
Q  200 aaatcattcttgatatctagcattttcc 227  Q
    ||||||||||||||||||||||||||||    
T  6043334 aaatcattcttgatatctagcattttcc 6043307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 3362820 - 3363048
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  3362820 caagaatgacatggcagaataaccacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtctggccggaaatcatgg 3362919  T
Q  101 ggtggtggatgttatgta---nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctta 197  Q
    |||||||| |||||||||           |||||||||||||||||||||||||||||||| |||| |||||||| || ||||||||| |||||||||||    
T  3362920 ggtggtgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgtcatgtcattcttaaatttttctta 3363019  T
Q  198 taaaatcattcttgatatctagcattttc 226  Q
    |||||||||||||||||||||||||||||    
T  3363020 taaaatcattcttgatatctagcattttc 3363048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 2 - 228
Target Start/End: Complemental strand, 37321815 - 37321587
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||| |||||||||| |||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  37321815 aagaatgacatggcagaataatcacccttaaattttatcaataaatagtcttgaaattaatgttagccaataaaatctcagtctagccggaaatcatggg 37321716  T
Q  102 gtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    ||||||| |||||||||          |||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||| |||||||||    
T  37321715 gtggtgggtgttatgtattttttatttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatttcattcttgaatatttcttata 37321616  T
Q  200 aaatcattcttgatatctagcattttcct 228  Q
    |||||||||||||||||||||||||||||    
T  37321615 aaatcattcttgatatctagcattttcct 37321587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 5 - 228
Target Start/End: Complemental strand, 3522025 - 3521801
Alignment:
Q  5 aatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggggtg 104  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||  | ||||||||||||||||||    
T  3522025 aatgacatggcagaataatcaccattagattttatcaagaaatagttctgaaattaatgttaaccaataaaatcttagtttggccggaaatcatggggtg 3521926  T
Q  105 gtggatgttatgtannnnnnnn-atgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttataaaat 203  Q
    |||| |||||||||         |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||    
T  3521925 gtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaat 3521826  T
Q  204 cattcttgatatctagcattttcct 228  Q
    |||||||||||||||||||||||||    
T  3521825 cattcttgatatctagcattttcct 3521801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 8145417 - 8145643
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| | ||||||||||||    
T  8145417 caagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaactaatgttagccaataaaatctcagcctggtcggaaatcatgg 8145516  T
Q  101 ggtggtggatgttatgtannnnnnnn-atgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    | |||||| |||||||||         |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||    
T  8145517 g-tggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttata 8145615  T
Q  200 aaatcattcttgatatctagcattttcc 227  Q
    ||||||||||||||||||||||||||||    
T  8145616 aaatcattcttgatatctagcattttcc 8145643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 14138710 - 14138938
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||    
T  14138710 caagaattacatggcagaataatcacccttaaattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagcctgatcggaaatcatgg 14138809  T
Q  101 ggtggtggatgttatgta-nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    |||||||| |||||||||         ||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||| |||||||||    
T  14138810 ggtggtgggtgttatgtatttttttttatgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttata 14138909  T
Q  200 aaatcattcttgatatctagcattttcct 228  Q
    ||||||||||| |||||||||||||||||    
T  14138910 aaatcattcttaatatctagcattttcct 14138938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 38899749 - 38899520
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||    
T  38899749 caagaatgacatggcagaataaccacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtctggccgaaaatcatgg 38899650  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaa-tttttctta 197  Q
    |||||||| |||||| ||          |||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||| ||||| |||    
T  38899649 ggtggtgggtgttatatatcttttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaattttttttta 38899550  T
Q  198 taaaatcattcttgatatctagcattttcc 227  Q
    ||||||||||||||||||||||||||||||    
T  38899549 taaaatcattcttgatatctagcattttcc 38899520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 2477679 - 2477906
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||| ||||||| |||||||||||||||    
T  2477679 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagtcaataaaatttcagcctggccggaaatcatggg 2477778  T
Q  102 gtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    ||||||| |||||||||          ||||||||||||||||| |||||||||||||| |||||| ||||||||| |||||||||  || |||||||||    
T  2477779 gtggtgggtgttatgtattttttttttatgaaagattaataaataagactgaaatctaaaggtgatcattgtgccatgtcattcttagatctttcttata 2477878  T
Q  200 aaatcattcttgatatctagcattttcc 227  Q
    ||||||||||||||||||||||||||||    
T  2477879 aaatcattcttgatatctagcattttcc 2477906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 2 - 206
Target Start/End: Complemental strand, 11361153 - 11360947
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  11361153 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagcctggccggaaatcatggg 11361054  T
Q  102 gtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    ||||||| |||||||||          ||||||||||||||||| ||| |||||||||| | |||||||||||||| ||||||||||||| |||||||||    
T  11361053 gtggtgggtgttatgtattttttttgtatgaaagattaataaattagattgaaatctaaagatgattattgtgccatgtcattcttgaatctttcttata 11360954  T
Q  200 aaatcat 206  Q
    |||||||    
T  11360953 aaatcat 11360947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 22913077 - 22912852
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||| | |  ||| ||||||||||    
T  22913077 caagaatgacatggcagaataatcacccttagattttatcaagaaattgtactgaaattaatgttagccaataaaatctctgtcgggccagaaatcatgg 22912978  T
Q  101 ggtggtggatgttatgta-nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    ||||||||||||||||||         |||| |||  |||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||       
T  22912977 ggtggtggatgttatgtatttttttttatgagaga--aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgat 22912880  T
Q  200 aaatcattcttgatatctagcattttcc 227  Q
    ||||||||||||||||||||||||||||    
T  22912879 aaatcattcttgatatctagcattttcc 22912852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 4434030 - 4433845
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||    
T  4434030 caagaatgatatggcagaataatcacccttagattttatcaagaaatagttctgaaattaatgttaaccaataaaatctcagtctggccggaaatcatgg 4433931  T
Q  101 ggtggtggatgttatgta-nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattctt 185  Q
    | |||||| |||||||||         ||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||    
T  4433930 gatggtgggtgttatgtatttttttttatgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattctt 4433845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 12614756 - 12614531
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||         | ||||    
T  12614756 caagaatgacatgacataataatcacccttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcct-------gtttatgg 12614664  T
Q  101 ggtggtggatgtta----tgtannnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaat-ttttct 195  Q
    | |||||| |||||    | |         ||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||| ||| |||| |    
T  12614663 gatggtgggtgttattttttttttttttttatgaaaggttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatctttttt 12614564  T
Q  196 tataaaatcattcttgatatctagcattttcct 228  Q
     |||||||||| |||||||||||||||||||||    
T  12614563 gataaaatcatacttgatatctagcattttcct 12614531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 31640963 - 31640846
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||| ||||||||||||||    
T  31640963 caagaatgacatggcagaataaccacccttagattttatcaagaaattgtcatgaaattaatgttagccaataaaatctcagcctggccggaaatcatgg 31640864  T
Q  101 ggtggtggatgttatgta 118  Q
    |||||||| |||||||||    
T  31640863 ggtggtgggtgttatgta 31640846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 17545708 - 17545476
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||| || |||||||||||||||  |||||||||||| | |  ||||||||||||||    
T  17545708 caagaatgacatggcagaataatcaccattagattttatcaagaaattgtactgaaattaatgttagtcaataaaatctctgtcgggccggaaatcatgg 17545609  T
Q  101 ggtggtggatgttatgta-------nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaattttt 193  Q
    |||||||| |||||| ||                ||||||   |||||||||||||||||||||| | ||||||||||| || ||||||||| ||| |||    
T  17545608 ggtggtgggtgttatttatttttattttttttattgaaag--gaataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattt 17545511  T
Q  194 cttataaaatcattcttgatatctagcattttcct 228  Q
     ||   |||||||||||||||||||||||||||||    
T  17545510 tttgataaatcattcttgatatctagcattttcct 17545476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 27481868 - 27481981
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    |||||||||||||   ||||||||||  |||| |||||| ||||||| |||  ||||||||||||| |||||||||| ||| ||||| ||||||||||||    
T  27481868 caagaatgacatg---gaataatcacatttag-ttttatgaagaaattgtcacgaaattaatgttagccaataaaatttcatcctagtcggaaatcatgg 27481963  T
Q  101 ggtggtggatgttatgta 118  Q
    |||||||| |||||||||    
T  27481964 ggtggtgggtgttatgta 27481981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 22913042 - 22913115
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| |||||||||||||||||||| | |||||| |||||||||| |||||||    
T  22913042 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatatatagcatt 22913115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 36880298 - 36880229
Alignment:
Q  49 gtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggggtggtggatgttatgta 118  Q
    |||||||||||||||||| |||||||||| |||| || | ||||||| ||||| ||||||||||||||||    
T  36880298 gtcctgaaattaatgttagccaataaaatttcagtctggtcggaaattatgggatggtggatgttatgta 36880229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 6043499 - 6043572
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| | ||| |||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  6043499 aaatctaagggtgattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 6043572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 8145452 - 8145387
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatat 215  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||| |||||||| ||||||||||    
T  8145452 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8145387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 4433995 - 4434068
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| |||||  ||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  4433995 aaatctaagggtgattattctgccatatcattcttgaaattttcttaaaaaaatctttcttgatatatagcatt 4434068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 12614721 - 12614794
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| || || ||||||||||||| |||||| |||||||  |||||||||| |||||||    
T  12614721 aaatctaagggtgattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatatatagcatt 12614794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 196
Target Start/End: Original strand, 17545673 - 17545718
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt 196  Q
    |||||||| |||||||||| ||||| ||||||||||||||||||||    
T  17545673 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 17545718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 10458465 - 10458409
Alignment:
Q  160 ggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatat 215  Q
    |||||||||| ||||| |||||||||||||||||||| |||||||  ||||||||||    
T  10458465 ggtgattattttgccatgtcattcttgaatttttcttgataaaatttttcttgatat 10458409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 13664736 - 13664791
Alignment:
Q  134 attaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaat 189  Q
    |||||||||| |||||||||||||| |||||||||| |  || |||||||||||||    
T  13664736 attaataaataagactgaaatctaagggtgattattctatcatgtcattcttgaat 13664791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 13664788 - 13664753
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattt 36  Q
    |||||||||||||| |||||||||||||||||||||    
T  13664788 caagaatgacatgatagaataatcacccttagattt 13664753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 12614483 - 12614511
Alignment:
Q  197 ataaaatcattcttgatatctagcatttt 225  Q
    |||||||||||||||||||||||||||||    
T  12614483 ataaaatcattcttgatatctagcatttt 12614511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 27482052 - 27482016
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagatttt 37  Q
    |||||||||||| |||||||||||||| |||||||||    
T  27482052 caagaatgacataacagaataatcacctttagatttt 27482016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 174; Significance: 2e-93; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 49387911 - 49387680
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49387911 caagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 49387812  T
Q  101 ggtggtggatgttatgta---nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctta 197  Q
    ||||||||||||||||||           |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  49387811 ggtggtggatgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctta 49387712  T
Q  198 taaaatcattcttgatatctagcattttcctt 229  Q
    ||||||||| ||||||||||| ||||||||||    
T  49387711 taaaatcatccttgatatctaacattttcctt 49387680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 9088912 - 9089138
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  9088912 caagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatgg 9089011  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    |||||||| |||||||||          |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||    
T  9089012 ggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttat 9089111  T
Q  199 aaaatcattcttgatatctagcatttt 225  Q
    |||||||||||||||||||||||||||    
T  9089112 aaaatcattcttgatatctagcatttt 9089138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 46441886 - 46442116
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  46441886 caagaatgacatggcaaaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcaacctggccggaaatcatgg 46441985  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    |||||||| |||||||||          |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  46441986 ggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttat 46442085  T
Q  199 aaaatcattcttgatatctagcattttcctt 229  Q
    |||||||||||||||||||||||||||||||    
T  46442086 aaaatcattcttgatatctagcattttcctt 46442116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 47290108 - 47290338
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  47290108 caagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatgg 47290207  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    |||||||| |||||||||          |||||||| ||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||    
T  47290208 ggtggtgggtgttatgtatcttttttttatgaaagaataataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatttttcttat 47290307  T
Q  199 aaaatcattcttgatatctagcattttcctt 229  Q
    |||||||||||||||||||||||||||||||    
T  47290308 aaaatcattcttgatatctagcattttcctt 47290338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 53123073 - 53123303
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  53123073 caagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtctggccggaaatcatgg 53123172  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    |||||||| |||||||||          |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||    
T  53123173 ggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttat 53123272  T
Q  199 aaaatcattcttgatatctagcattttcctt 229  Q
    |||||||||||||||||||||||||||||||    
T  53123273 aaaatcattcttgatatctagcattttcctt 53123303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 44893236 - 44893007
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  44893236 caagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccgaaaatcatgg 44893137  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    | |||||| |||||||||          |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||    
T  44893136 gatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttat 44893037  T
Q  199 aaaatcattcttgatatctagcattttcct 228  Q
    ||||||||||||||||||||||||||||||    
T  44893036 aaaatcattcttgatatctagcattttcct 44893007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 44893468 - 44893696
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  44893468 caagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccgaaaatcatgg 44893567  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    | |||||| |||||||||          |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||    
T  44893568 gatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttat 44893667  T
Q  199 aaaatcattcttgatatctagcattttcc 227  Q
    |||||||||||||||||||||||||||||    
T  44893668 aaaatcattcttgatatctagcattttcc 44893696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 24128281 - 24128507
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24128281 caagaatgacatggcagaataatcatccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatgg 24128380  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    ||||||||||||||||||          |||||||||||||||||||||||||||||||| ||| ||||||||| || ||||||||| ||||||||||||    
T  24128381 ggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttcttat 24128480  T
Q  199 aaaatcattcttgatatctagcatttt 225  Q
    |||||||||||||||||||||||||||    
T  24128481 aaaatcattcttgatatctagcatttt 24128507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 31078842 - 31078612
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31078842 caagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatgg 31078743  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    |||| ||| |||||||||          ||||||||||||||||||||| |||||||||| | |||||||||||||| ||||||||||||||||| ||||    
T  31078742 ggtgatgggtgttatgtatcttttttttatgaaagattaataaatgagattgaaatctaaagatgattattgtgccatgtcattcttgaattttttttat 31078643  T
Q  199 aaaatcattcttgatatctagcattttcctt 229  Q
    |||||||||||||||||||||||||||||||    
T  31078642 aaaatcattcttgatatctagcattttcctt 31078612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 36073392 - 36073619
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||  |||||||||||||    
T  36073392 caagaatgacatggcagaataatcacccttaaattttatcaagaaatattcatgaaattaatgttaaccaataaaatctcagcctgaccggaaatcatgg 36073491  T
Q  101 ggtggtggatgttatgtannnnnnnn-atgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    |||||||| |||||||||         |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  36073492 ggtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttata 36073591  T
Q  200 aaatcattcttgatatctagcattttcc 227  Q
    ||||||||||||||||||||||||||||    
T  36073592 aaatcattcttgatatctagcattttcc 36073619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 36072989 - 36073223
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  36072989 caagaatgacatggcagaataaccacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtctggccggaaatcatgg 36073088  T
Q  101 ggtggtggatgttatgta------nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttc 194  Q
    |||||||| |||||||||              |||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||    
T  36073089 ggtggtgggtgttatgtatcttttttttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttc 36073188  T
Q  195 ttataaaatcattcttgatatctagcattttcctt 229  Q
    ||||||||||||| |||||||||||||||||||||    
T  36073189 ttataaaatcatttttgatatctagcattttcctt 36073223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 4751488 - 4751719
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||    
T  4751488 caagaatgacatggcagaataaccacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtctggtcggaaatcatgg 4751587  T
Q  101 ggtggtggatgttatgta---nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctta 197  Q
    |||||||| |||||||||           |||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||| |||||||||||    
T  4751588 ggtggtgggtgttatgtattttcttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttaaatttttctta 4751687  T
Q  198 taaaatcattcttgatatctagcattttcctt 229  Q
    |||||| |||||||||||||||||||||||||    
T  4751688 taaaattattcttgatatctagcattttcctt 4751719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 2 - 228
Target Start/End: Complemental strand, 7745134 - 7744906
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  7745134 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagcctggccggaaatcatggg 7745035  T
Q  102 gtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    ||||||| |||||||||          |||||| |||||||||||||| |||||||||| |||||||||||||| | ||||||||||||| |||||||||    
T  7745034 gtggtgggtgttatgtattttttttttatgaaatattaataaatgagattgaaatctaaaggtgattattgtgcaatgtcattcttgaatctttcttata 7744935  T
Q  200 aaatcattcttgatatctagcattttcct 228  Q
    ||||||||||||||||||| |||||||||    
T  7744934 aaatcattcttgatatctaacattttcct 7744906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 10442812 - 10442581
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  10442812 caagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagcctggccggaaatcatgg 10442713  T
Q  101 ggtggtggatgttatg---tannnnnnnnatgaaagatt-aataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctt 196  Q
    |||||||| |||||||   |          ||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||    
T  10442712 ggtggtgggtgttatgtttttttttttttttgaaagattaaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 10442613  T
Q  197 ataaaatcattcttgatatctagcattttcct 228  Q
    ||||||||||||||||||||||||||||||||    
T  10442612 ataaaatcattcttgatatctagcattttcct 10442581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 2 - 228
Target Start/End: Complemental strand, 50156600 - 50156373
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||    
T  50156600 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcataaaattaatgttaaccaataaaatctcagcctggccggaaatcatggg 50156501  T
Q  102 gtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    ||||||| |||||||||          |||||||||||||||||||||||||||||||| |||||||||| || || |||||||||||||||||||||||    
T  50156500 gtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaa-ggtgattattatgtcatgtcattcttgaatttttcttata 50156402  T
Q  200 aaatcattcttgatatctagcattttcct 228  Q
    ||||||||||||||||||| |||||||||    
T  50156401 aaatcattcttgatatctaacattttcct 50156373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 21802345 - 21802114
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| || ||||||||||||||    
T  21802345 caagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagtctggccggaaatcatgg 21802246  T
Q  101 ggtg---gtggatgttatgta-nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctt 196  Q
    ||||   |||| |||||||||         |||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||| ||||||    
T  21802245 ggtggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt 21802146  T
Q  197 ataaaatcattcttgatatctagcattttcct 228  Q
    ||||||||||||||||||||||||||||||||    
T  21802145 ataaaatcattcttgatatctagcattttcct 21802114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 22199303 - 22199531
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| ||| ||||||||||    
T  22199303 caagaatgacatggcagaataatcagccttagattttatcaagaaatagtcttgaaactaatgttagccaataaaatctcagcctggccagaaatcatgg 22199402  T
Q  101 ggtggtggatgttatgtannnnnnnn-atgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    | |||||| |||||||||         |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| || |||||||||    
T  22199403 g-tggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttata 22199501  T
Q  200 aaatcattcttgatatctagcattttcctt 229  Q
    ||||||||||||||||||||||||||||||    
T  22199502 aaatcattcttgatatctagcattttcctt 22199531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 2624879 - 2625109
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||| || ||||||||||||||    
T  2624879 caagaatgaaatggcagaataatcacccttagattttatcaagaaataatcatgaaattaatgttaatcaataaaatctcagtctggccggaaatcatgg 2624978  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
     ||||||| |||||||||          |||||||||||||||||||||||||||||||| |||||||||||||| | |||||| |||||| ||||||||    
T  2624979 agtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcatttttgaatctttcttat 2625078  T
Q  199 aaaatcattcttgatatctagcattttcctt 229  Q
    |||||||||||||||||||| ||||||||||    
T  2625079 aaaatcattcttgatatctaacattttcctt 2625109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 17655472 - 17655699
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  17655472 caagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagcctggccggaaatcatgg 17655571  T
Q  101 ggtggtggatgt--tatgtannnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctt-a 197  Q
    | || ||| |||  ||||||        ||||||| |||||||||||||||||||||||| ||| |||||| || || ||||||||| ||| |||||| |    
T  17655572 gatgatgggtgttatatgtattttttttatgaaaggttaataaatgagactgaaatctaaaggtaattattatgtcatgtcattcttaaatctttcttga 17655671  T
Q  198 taaaatcattcttgatatctagcatttt 225  Q
    ||||||||||||| ||||||||||||||    
T  17655672 taaaatcattcttaatatctagcatttt 17655699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 33530711 - 33530479
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||| ||||||| |||||||||||| |    
T  33530711 caagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaactaatgttagccaataaaatttcagcctggccggaaatcat-g 33530613  T
Q  101 ggtggtggatgttatg-------tannnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaattttt 193  Q
    |||||||| |||||||       ||        ||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||| || |||    
T  33530612 ggtggtgggtgttatgttttttttattttttttatgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttggatcttt 33530513  T
Q  194 cttataaaatcattcttgatatctagcattttcc 227  Q
     |||||||||||||||||||||||||||||||||    
T  33530512 tttataaaatcattcttgatatctagcattttcc 33530479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 2 - 217
Target Start/End: Complemental strand, 23964487 - 23964269
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||  |||||||||||| |    
T  23964487 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagtcaataaaatctcagcctgaccggaaatcatgcg 23964388  T
Q  102 gtggtggatgttatgta---nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    ||||||| |||||||||           ||||||||||||||||||||| |||||||||| | |||||||| ||||| ||||||||| ||| ||||||||    
T  23964387 gtggtgggtgttatgtatttttttttttatgaaagattaataaatgagattgaaatctaaagatgattattatgccatgtcattcttaaatctttcttat 23964288  T
Q  199 aaaatcattcttgatatct 217  Q
    |||||||||||||||||||    
T  23964287 aaaatcattcttgatatct 23964269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 37934964 - 37934735
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    |||||||||||||  |||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| || | ||||||| ||||    
T  37934964 caagaatgacatggtagaatactcacccttagattttatcaagaaattatcctgaaattaatgttaaccaataaaatctcagtctggtcggaaattatgg 37934865  T
Q  101 ggtggtggatgttatgta-nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctt-at 198  Q
    | |||||| |||||||||         ||||||| ||||||||||||| |||||||||| ||||||||||||| ||  ||||| |||||| |||||| ||    
T  37934864 gatggtggttgttatgtatttttttttatgaaaggttaataaatgagattgaaatctaagggtgattattgtgtcatatcattattgaatctttcttaat 37934765  T
Q  199 aaaatcattcttgatatctagcattttcct 228  Q
    ||||||| || | ||||||| |||||||||    
T  37934764 aaaatcagtcataatatctaacattttcct 37934735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 42671712 - 42671939
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||   | ||||||||| |||||    
T  42671712 aagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctaaaattaatgttaaccaataaaatctcaatttggccggaaattatggg 42671811  T
Q  102 gtggtggatgttatg-tannnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ata 199  Q
    ||| ||  ||||||| |         | ||||| |||| |||||||||| ||||||||   |||||||| || || ||||||||||||| |||||| |||    
T  42671812 gtgatgagtgttatgtttttttttttacgaaaggttaacaaatgagactcaaatctaagaatgattattatgtcatgtcattcttgaatctttcttgata 42671911  T
Q  200 aaatcattcttgatatctagcattttcc 227  Q
    ||||||||||||||||||| ||||||||    
T  42671912 aaatcattcttgatatctaacattttcc 42671939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 5 - 229
Target Start/End: Original strand, 37219671 - 37219904
Alignment:
Q  5 aatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggggtg 104  Q
    |||||||||  | ||||||||| |||| ||||||||||||||| ||||||||||||||||||  |||||||||||||| || |||||||||||| |||||    
T  37219671 aatgacatggtaaaataatcactcttaaattttatcaagaaattgtcctgaaattaatgttagtcaataaaatctcagtctggccggaaatcattgggtg 37219770  T
Q  105 gtggatgttatgta--------nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctt 196  Q
     |||||||||||||                ||||||| ||||||||| ||| |||||||||| | |||||||| ||||| ||||||||| ||| ||||||    
T  37219771 atggatgttatgtatttttttttattttttatgaaaggttaataaataagattgaaatctaaggatgattattctgccatgtcattcttaaatctttctt 37219870  T
Q  197 -ataaaatcattcttgatatctagcattttcctt 229  Q
     |||||||||||||||||||||| ||||||||||    
T  37219871 gataaaatcattcttgatatctaacattttcctt 37219904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 5 - 196
Target Start/End: Original strand, 30563255 - 30563448
Alignment:
Q  5 aatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggggtg 104  Q
    ||||||| | ||||||| ||| | |||||||||||||||||||  ||||| ||||||||||  |||||||||||||||||| ||||||||||||||||||    
T  30563255 aatgacacggcagaatagtcatctttagattttatcaagaaattatcctgcaattaatgttggccaataaaatctcagcctggccggaaatcatggggtg 30563354  T
Q  105 gtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctt 196  Q
    |||| |||||||||          ||||||| ||||||||| ||||||||||||||  |||||||||||| || ||||||||||||| ||||||    
T  30563355 gtgggtgttatgtattttttttttatgaaaggttaataaataagactgaaatctaagtgtgattattgtgtcatgtcattcttgaatctttctt 30563448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 24392709 - 24392942
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||||||  |||||||||||| | |  ||||||||||||||    
T  24392709 caagaatgacatggcagaataatcacccttaaattttatcaagaaattgtactgaaattaatgttagtcaataaaatctctgtcgggccggaaatcatgg 24392808  T
Q  101 ggtggtggatgttatg-----------tannnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaat 189  Q
    |||| ||| |||||||           ||        |||||||   |||||||||||||||||||||| | |||||||||||| | ||||||||| |||    
T  24392809 ggtgatgggtgttatgtattttttttttattttttttatgaaag--gaataaatgagactgaaatctaaggatgattattgtgctatgtcattcttaaat 24392906  T
Q  190 ttttcttataaaatcattcttgatatctagcatttt 225  Q
     ||||||   ||||||||||||||||||||||||||    
T  24392907 atttcttgataaatcattcttgatatctagcatttt 24392942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 229
Target Start/End: Complemental strand, 11314255 - 11314044
Alignment:
Q  3 agaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgggg 102  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||||||||| |||||||       || | |||| |||||||||||    
T  11314255 agaatgacatgacagaataatcatccttagattatatcaagaaattgttctgaaattaatgttagccaataa-------gcttggccgaaaatcatgggg 11314163  T
Q  103 tggtggatgttatgtannnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaa 201  Q
    ||       |||||||        |  |||| ||||||||| |||||  ||||||| ||||||||||||| || |||||||||| || |||||| |||||    
T  11314162 tg-------ttatgtacttttttta--aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaa 11314072  T
Q  202 atcattcttgatatctagcattttcctt 229  Q
    ||||||||||||||||||||||||||||    
T  11314071 atcattcttgatatctagcattttcctt 11314044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 36073765 - 36073650
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    ||||||||||||||| |||||||||  ||||||||||| ||||||| ||||| |||||||| ||| |||||||||||||||  | |||||||||||||||    
T  36073765 aagaatgacatgacaaaataatcacttttagattttatgaagaaattgtcctaaaattaatattagccaataaaatctcagtttggccggaaatcatggg 36073666  T
Q  102 gtggtggatgttatgt 117  Q
    ||||||  ||||||||    
T  36073665 gtggtgcgtgttatgt 36073650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 226
Target Start/End: Original strand, 44744481 - 44744698
Alignment:
Q  5 aatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggggtg 104  Q
    |||||||||  |||||||||||||||| |||||||||| |||| ||||||||||| ||||||  | ||||||| |||| || |||||||||||| |||||    
T  44744481 aatgacatggtagaataatcacccttaaattttatcaaaaaattgtcctgaaattgatgttagtcgataaaat-tcagtctggccggaaatcatagggtg 44744579  T
Q  105 gtggatgttatgtannnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttataaaatc 204  Q
    |||| |||||||||           | || ||||||||| |||||||||||||| | | ||||||| | || ||||||||||||| |   | ||||||||    
T  44744580 gtgggtgttatgtatttttttttgtataggttaataaataagactgaaatctaaggataattattgagtcatgtcattcttgaatct---tgataaaatc 44744676  T
Q  205 attcttgatatctagcattttc 226  Q
    ||| |||||||||| |||||||    
T  44744677 atttttgatatctaacattttc 44744698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 33530676 - 33530749
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| |||||||||||||||||||| |||||||| |||||||||| |||||||    
T  33530676 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatatatagcatt 33530749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 161 - 227
Target Start/End: Complemental strand, 25063436 - 25063369
Alignment:
Q  161 gtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 227  Q
    ||||||||| | ||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  25063436 gtgattattctaccatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcc 25063369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 10442777 - 10442850
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  10442777 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 10442850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 31078807 - 31078880
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  31078807 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 31078880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 49387876 - 49387949
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  49387876 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 49387949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 2624914 - 2624841
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| |||||  ||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  2624914 aaatctaagggtgattattctgccatttcattcttgaaattttcttgataaaatctttcttgatatatagcatt 2624841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 9111337 - 9111410
Alignment:
Q  31 agattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggggtg 104  Q
    ||||||||||||||||| |||  |||||||| ||||||||||||||| ||  ||| |||| |||||||||||||    
T  9111337 agattttatcaagaaattgtctcgaaattaaagttaaccaataaaatttctacctggccgaaaatcatggggtg 9111410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 21802310 - 21802383
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||| |||||||  |||||||||| |||||||    
T  21802310 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 21802383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 22199338 - 22199265
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| | |||||||| ||||| |||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  22199338 aaatctaaggctgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 22199265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 24392744 - 24392671
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||| ||| |||||||||| ||||| |||||||||||||||||||| | |||||| |||||||||| |||||||    
T  24392744 aaatttaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcatt 24392671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 36073024 - 36072951
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||| ||||| ||||| |||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  36073024 aaatctaagggtggttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 36072951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 46441921 - 46441848
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  46441921 aaatctaagggtgattattttgccatgtcattcttgaaattttcttaaaaaaatctttcttgatatatagcatt 46441848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 47290143 - 47290070
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  47290143 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 47290070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 53123108 - 53123034
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt--ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| |||||||||||| |||||||  | |||||| |||||||||| |||||||    
T  53123108 aaatctaagggtgattattctgccatgtcattcttgaaattttctttgaaaaaatctttcttgatatatagcatt 53123034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 24128316 - 24128243
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| | |||||||| ||||| |||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  24128316 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 24128243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 36073349 - 36073256
Alignment:
Q  135 ttaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 227  Q
    ||||||||| ||||||||||||||  || |||||| || ||  |||||||| ||| |||||| ||||||||||| ||  |||||||||||||||    
T  36073349 ttaataaataagactgaaatctaagagtaattattctggcatatcattcttaaatctttcttgataaaatcatttttagtatctagcattttcc 36073256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 36073427 - 36073354
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||| ||| |||||||||| ||||| |||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  36073427 aaatttaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 36073354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 44893503 - 44893430
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttg-aatttttcttataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| |||||||||| ||||||| | | |||||| |||||||||| |||||||    
T  44893503 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgaaaaaatctttcttgatatatagcatt 44893430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 21802156 - 21802191
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattt 36  Q
    |||||||||||||||| |||||||||||||||||||    
T  21802156 caagaatgacatgacacaataatcacccttagattt 21802191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 11314088 - 11314122
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagatt 35  Q
    |||||||||||||||| ||||||||||||||||||    
T  11314088 caagaatgacatgacacaataatcacccttagatt 11314122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 197
Target Start/End: Complemental strand, 17655507 - 17655461
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctta 197  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||||    
T  17655507 aaatctaagggtgattattctgccatgtcattcttgaaattttctta 17655461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 196
Target Start/End: Complemental strand, 9088947 - 9088902
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt 196  Q
    |||||||| |||||||||| ||||| |||||||||||| |||||||    
T  9088947 aaatctaagggtgattattctgccatgtcattcttgaaattttctt 9088902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 171; Significance: 1e-91; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 48880950 - 48880721
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  48880950 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatgg 48880851  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    |||||||| |||||||||          ||||||||||||||||||| ||||||||||||  ||||||||||||||| ||||||||||||||||||||||    
T  48880850 ggtggtgggtgttatgtatcttttttttatgaaagattaataaatgaaactgaaatctaaatgtgattattgtgccatgtcattcttgaatttttcttat 48880751  T
Q  199 aaaatcattcttgatatctagcattttcct 228  Q
    ||||||||||||||||||||||||||||||    
T  48880750 aaaatcattcttgatatctagcattttcct 48880721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 45637754 - 45637982
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| || ||||||||||||||    
T  45637754 caagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgctagccaataaaatctcagtctggccggaaatcatgg 45637853  T
Q  101 ggtggtggatgttatgta-nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    ||||||||||||||||||         |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||    
T  45637854 ggtggtggatgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttata 45637953  T
Q  200 aaatcattcttgatatctagcattttcct 228  Q
    ||||||||||| |||||||||||||||||    
T  45637954 aaatcattcttaatatctagcattttcct 45637982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 2 - 229
Target Start/End: Original strand, 3962022 - 3962250
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||| | |||||||||||||||    
T  3962022 aagaatgacatgacagaataatcacccttaaattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcagcttggccggaaatcatggg 3962121  T
Q  102 gtggtggatgttatgta-nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttataa 200  Q
    ||||||| |||||||||         |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| || ||||||||||    
T  3962122 gtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatatttcttataa 3962221  T
Q  201 aatcattcttgatatctagcattttcctt 229  Q
    |||||||||||||||||||||||||||||    
T  3962222 aatcattcttgatatctagcattttcctt 3962250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 30848612 - 30848839
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  30848612 aagaatgacatggcagaataatcatccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtctggccggaaatcatggg 30848711  T
Q  102 gtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
     | |||| |||||||||          |||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||    
T  30848712 atagtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttgaatttttcttata 30848811  T
Q  200 aaatcattcttgatatctagcattttcc 227  Q
    ||| ||||||||||||||||||||||||    
T  30848812 aaagcattcttgatatctagcattttcc 30848839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 24395015 - 24395241
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| ||||||||  ||| |||||||||||||| ||||||| ||||||||||||||| |||||||||||||| ||| |||||||||||||||    
T  24395015 aagaatgacatggcagaataacaacctttagattttatcaaaaaatagttctgaaattaatgttagccaataaaatctcaacctggccggaaatcatggg 24395114  T
Q  102 gtggtggatgttatgtannnnnnnn-atgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttataa 200  Q
    ||||||| |||||||||         |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||| ||||||    
T  24395115 gtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataa 24395214  T
Q  201 aatcattcttgatatctagcattttcc 227  Q
    |||||||||||||||||||||||||||    
T  24395215 aatcattcttgatatctagcattttcc 24395241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 42611853 - 42612082
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||| ||  |||||||||||||    
T  42611853 caagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatttcagtctgaccggaaatcatgg 42611952  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    |||||||| |||||||||          ||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||  || ||||||||    
T  42611953 ggtggtgggtgttatgtattttttttttatgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttcttat 42612052  T
Q  199 aaaatcattcttgatatctagcattttcct 228  Q
    ||||||||||||||||||||||||||||||    
T  42612053 aaaatcattcttgatatctagcattttcct 42612082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 15329315 - 15329546
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||| || ||||||||||||||    
T  15329315 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagtcaataaaatctcagactggccggaaatcatgg 15329414  T
Q  101 ggtggtggatgtta---tgtannnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctta 197  Q
    |||||||  |||||   | |         ||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||| |||||||    
T  15329415 ggtggtgagtgttattttttttattttttatgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttgaatatttctta 15329514  T
Q  198 taaaatcattcttgatatctagcattttcctt 229  Q
    ||||||||||||| ||||||||||||||||||    
T  15329515 taaaatcattctttatatctagcattttcctt 15329546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 34482878 - 34483108
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||| ||    
T  34482878 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagtctggccggaaatcat-gg 34482976  T
Q  102 gtggtggatgttatgta------nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttct 195  Q
    ||||||| |||||||||              ||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||| |||||    
T  34482977 gtggtgggtgttatgtattttttttatttttatgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 34483076  T
Q  196 tataaaatcattcttgatatctagcattttcc 227  Q
    ||||||||||||||||||||||| ||||||||    
T  34483077 tataaaatcattcttgatatctaacattttcc 34483108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 4974758 - 4974532
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||  | |||||||||||||     
T  4974758 caagaatgacatggcagaataatcacccttagattttatcaagaaattatcctgaaattaatgttagccaataaaatctcagtttggccggaaatcatga 4974659  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    |||||||| |||||||||          ||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||| ||||    
T  4974658 ggtggtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcttttttat 4974559  T
Q  199 aaaatcattcttgatatctagcatttt 225  Q
    |||||||||||||||||||||||||||    
T  4974558 aaaatcattcttgatatctagcatttt 4974532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 2 - 227
Target Start/End: Complemental strand, 25167872 - 25167651
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||    
T  25167872 aagaatgacatggcagaataatcatccttagattttatcaagaaatagttctgaaattaatgttaaccaataaaatctcagtctggccggaaatcatggg 25167773  T
Q  102 gtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    ||| ||| |||||||||          ||||||||||      |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  25167772 gtgatgggtgttatgtatcttttttttatgaaagatt------tgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttata 25167679  T
Q  200 aaatcattcttgatatctagcattttcc 227  Q
    ||||||||||||||||||||||||||||    
T  25167678 aaatcattcttgatatctagcattttcc 25167651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 15577873 - 15577640
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||| |||| |||||||||||||| |||||| |||||||| || ||||||||||||||    
T  15577873 caagaatgacatggcagaataatcacccttagactttatcaagaaaaagtcttgaaattaatgttagccaatataatctcagtctggccggaaatcatgg 15577774  T
Q  101 ggtggtggatgttatgtannnnnnnn-----atgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttct 195  Q
    | |||||| |||||||||             || ||||||||||||||||||||||||||||| ||||||||||||| || |||||||||| || |||||    
T  15577773 gttggtgggtgttatgtatttttttttttttataaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttggatctttct 15577674  T
Q  196 tataaaatcattcttgatatctagcattttcctt 229  Q
    ||||||||||||||||||||||||||||||||||    
T  15577673 tataaaatcattcttgatatctagcattttcctt 15577640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 2 - 228
Target Start/End: Original strand, 42696126 - 42696355
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||  ||||||||||||||||| ||||||||||||||| ||||||||||||||||||  ||||||||||||| ||| ||||||||||| |||    
T  42696126 aagaatgacatagcagaataatcacccttatattttatcaagaaattgtcctgaaattaatgttagtcaataaaatctcaacctggccggaaatcaaggg 42696225  T
Q  102 gtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctt-at 198  Q
    |||||||||||||||||          ||||||  |||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||| || ||    
T  42696226 gtggtggatgttatgtattttttttttatgaaaagttaataaatgagactgaaatctaagggtgattattgtaccatgtcattcttgaattttttttgat 42696325  T
Q  199 aaaatcattcttgatatctagcattttcct 228  Q
    ||||||||| |||||||||| |||||||||    
T  42696326 aaaatcattattgatatctaacattttcct 42696355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 2 - 226
Target Start/End: Complemental strand, 37477102 - 37476876
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| ||||||||||| ||||| ||||||||||||||| || ||||||||||||||| ||||||||||||| | |  |||||||||||||||    
T  37477102 aagaatgacatggcagaataatcatccttaaattttatcaagaaattgtactgaaattaatgttagccaataaaatctctgtcgggccggaaatcatggg 37477003  T
Q  102 gtggtggatgttatgtannnnnnnnatg--aaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    ||||||| |||||||||         ||   || || |||||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||||       
T  37477002 gtggtgggtgttatgtattttttttctgtataaaatgaataaatgagactgaaatctaagggtgattattgtgccatgtcattattaaatctttcttgat 37476903  T
Q  200 aaatcattcttgatatctagcattttc 226  Q
    |||||||||||||||||||||||||||    
T  37476902 aaatcattcttgatatctagcattttc 37476876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 20010120 - 20009895
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||| ||| ||||||||| ||||    
T  20010120 caagaatgacat-acagaataatcacccttagattttatcaaaaaattgtcctgaaattaatgttagccaataaaatctcaacctggccggaaattatgg 20010022  T
Q  101 ggtggtggatgttatgta-nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaat-ttttcttat 198  Q
    |||  ||| |||||||||         || |||| ||||||||||||||| ||||||||   ||||||||||| || ||||||||||||| |||| | ||    
T  20010021 ggttatgggtgttatgtattttttcttattaaaggttaataaatgagactaaaatctaagtatgattattgtgtcatgtcattcttgaatcttttttgat 20009922  T
Q  199 aaaatcattcttgatatctagcatttt 225  Q
    |||||||||| ||||||||| ||||||    
T  20009921 aaaatcattcatgatatctatcatttt 20009895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 2 - 218
Target Start/End: Original strand, 29737182 - 29737406
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    ||||||||||||  |||||||||||||||||||||||| ||||||| |||| ||||||||||||| |||||||||||||| |||  ||||||||||||||    
T  29737182 aagaatgacatggtagaataatcacccttagattttattaagaaattgtcccgaaattaatgttagccaataaaatctcaacctgaccggaaatcatggg 29737281  T
Q  102 gtggtggatgttatgta-------nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttc 194  Q
    || ||||  ||||||||               ||||||| |||||||||||||||||||||||| ||||||||||||| || || |||||| ||| ||||    
T  29737282 gtagtgggagttatgtatttttttttctttctatgaaaggttaataaatgagactgaaatctaagggtgattattgtgacatgttattcttaaatctttc 29737381  T
Q  195 tt-ataaaatcattcttgatatcta 218  Q
    || ||||||||||||||||||||||    
T  29737382 ttgataaaatcattcttgatatcta 29737406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 35444600 - 35444714
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||    
T  35444600 caagaatgacatggcagaataatcacccttagattttatcaagaaatagttctgaaattaatgttaaccaataaaatctcagcctggccgaaaatcatgg 35444699  T
Q  101 ggtggtggatgttat 115  Q
    | |||||| ||||||    
T  35444700 gatggtgggtgttat 35444714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 2 - 229
Target Start/End: Original strand, 18037021 - 18037249
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||| |||||||||| |||| || ||||||||||||||| ||||||||||||| | |  ||| |||||||||||    
T  18037021 aagaatgacatggcagaataatcacccttaaattttatcaaaaaattgtactgaaattaatgttagccaataaaatctctgtcgggccagaaatcatggg 18037120  T
Q  102 gtggtggatgttatgtannnnnnnnatga-aagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttataa 200  Q
    ||||||| |||||||||         | |  |||  |||||||| ||||||||||||| |||||||||||| ||| ||||||||| ||| ||||||   |    
T  18037121 gtggtgggtgttatgtatttttttttttatgagaggaataaatgtgactgaaatctaagggtgattattgtaccatgtcattcttaaatctttcttgata 18037220  T
Q  201 aatcattcttgatatctagcattttcctt 229  Q
    ||||||| |||||||||||||||||||||    
T  18037221 aatcattgttgatatctagcattttcctt 18037249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 127 - 228
Target Start/End: Original strand, 35445567 - 35445668
Alignment:
Q  127 atgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 226  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35445567 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcattttc 35445666  T
Q  227 ct 228  Q
    ||    
T  35445667 ct 35445668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 15238424 - 15238655
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||| || |||||||||||||||  |||||||||||| | |  ||||||||||||||    
T  15238424 caagaatgacatggcagaataatcaccattagattttatcaagaaattgtactgaaattaatgttagtcaataaaatctctgtcgggccggaaatcatgg 15238523  T
Q  101 ggtggtggatgtta------tgtannnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttc 194  Q
    |||||||| |||||      | ||        |||||||   |||||||||||||||||||||| | ||||||||||| || ||||||||| ||| |||     
T  15238524 ggtggtgggtgttatttatttttattttttttatgaaag--gaataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatatttt 15238621  T
Q  195 ttataaaatcattcttgatatctagcattttcct 228  Q
    ||   |||||||||||||||||||||||||||||    
T  15238622 ttgataaatcattcttgatatctagcattttcct 15238655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 127 - 227
Target Start/End: Original strand, 35876414 - 35876514
Alignment:
Q  127 atgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 226  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||  || ||||||||||||||||||||||||||||||||||||    
T  35876414 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatttttagatatttcttataaaatcattcttgatatctagcattttc 35876513  T
Q  227 c 227  Q
    |    
T  35876514 c 35876514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 36790488 - 36790372
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| ||||||||| ||||||| ||||||||||||||| || ||||||||||||||| ||||||||||||||| ||||||| || |  | ||    
T  36790488 aagaatgacatggcagaataattacccttaaattttatcaagaaattgttctgaaattaatgttagccaataaaatctcagtctagccgaaattttttgg 36790389  T
Q  102 gtggtggatgttatgta 118  Q
    ||||||| |||||||||    
T  36790388 gtggtgggtgttatgta 36790372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 40880815 - 40880713
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||| ||||| ||||||| |||||||  ||||||||||||||||| |||||||||||| ||||| | || |||||||||    
T  40880815 caagaatgacatggcagaataatcatccttaaattttatgaagaaattatcctgaaattaatgttagccaataaaatcttagcctggtcgaaaatcatgg 40880716  T
Q  101 ggt 103  Q
    |||    
T  40880715 ggt 40880713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 4974723 - 4974796
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  4974723 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 4974796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 42611888 - 42611815
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  42611888 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 42611815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 45637789 - 45637716
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  45637789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 45637716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 15577841 - 15577911
Alignment:
Q  154 tctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    ||||| |||||||||| ||||| |||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  15577841 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15577911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 15329350 - 15329277
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| || || |||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  15329350 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15329277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 48880915 - 48880988
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| || || |||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  48880915 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 48880988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 196
Target Start/End: Complemental strand, 15238459 - 15238414
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt 196  Q
    |||||||| |||||||||| ||||| ||||||||||||||||||||    
T  15238459 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 15238414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 35444635 - 35444562
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||| | |||||| ||||| |||| |||||||    
T  35444635 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttaatatatagcatt 35444562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 227
Target Start/End: Complemental strand, 40880706 - 40880641
Alignment:
Q  161 gtgattattgtgccacgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 227  Q
    ||||||||||||||| || ||| || ||| ||||  || ||||||||||||||||||||||||||||    
T  40880706 gtgattattgtgccatgttattttttaatctttca-atcaaatcattcttgatatctagcattttcc 40880641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 36790336 - 36790271
Alignment:
Q  163 gattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 227  Q
    |||||||||| || ||||||||||||| ||| || |||||| |||| ||||||| |||||||||||    
T  36790336 gattattgtgtcatgtcattcttgaatctttgttgataaaaccattattgatatttagcattttcc 36790271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 169; Significance: 2e-90; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 33380250 - 33380477
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33380250 aagaatgacatggctgaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggg 33380349  T
Q  102 gtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    ||||||| |||||||||          |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  33380350 gtggtgggtgttatgtatctttttttaatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttata 33380449  T
Q  200 aaatcattcttgatatctagcattttcc 227  Q
    ||||||||||||||||||||||||||||    
T  33380450 aaatcattcttgatatctagcattttcc 33380477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 35160800 - 35161029
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  35160800 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggg 35160899  T
Q  102 gtggtggatgttatgta----nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctta 197  Q
    ||||||| |||||||||            |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  35160900 gtggtgggtgttatgtatcttttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctta 35160999  T
Q  198 taaaatcattcttgatatctagcattttcc 227  Q
    ||||||||||||||||||||||||||||||    
T  35161000 taaaatcattcttgatatctagcattttcc 35161029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 23268085 - 23267857
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  23268085 caagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtctggccggaaatcatgg 23267986  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    |||||||| |||||||||          |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||    
T  23267985 ggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttat 23267886  T
Q  199 aaaatcattcttgatatctagcattttcc 227  Q
    |||||||||||||||||||||||||||||    
T  23267885 aaaatcattcttgatatctagcattttcc 23267857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 10661930 - 10662158
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  10661930 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatagg 10662029  T
Q  102 gtggtggatgttatgta---nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    ||||||| |||||||||           |||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  10662030 gtggtgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttat 10662129  T
Q  199 aaaatcattcttgatatctagcattttcc 227  Q
    |||||||||||||||||||||||||||||    
T  10662130 aaaatcattcttgatatctagcattttcc 10662158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 7475531 - 7475303
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7475531 caagaatgacatgatagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatgg 7475432  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    |||||||| |||||||||          |||||||||||||||||||||||||||||||| |||||||||| || ||  |||||||||||||||||||||    
T  7475431 ggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattatgtcatatcattcttgaatttttcttat 7475332  T
Q  199 aaaatcattcttgatatctagcattttcc 227  Q
    |||||||||||||||||||||||||||||    
T  7475331 aaaatcattcttgatatctagcattttcc 7475303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 9293599 - 9293370
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  9293599 caagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcctggccggaaatcatgg 9293500  T
Q  101 ggtggtggatgttatgta---nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctta 197  Q
    |||||||| |||||||||           |||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||| |||||||    
T  9293499 ggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctta 9293400  T
Q  198 taaaatcattcttgatatctagcattttcc 227  Q
    ||||||||||||||||||||||||||||||    
T  9293399 taaaatcattcttgatatctagcattttcc 9293370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 2 - 223
Target Start/End: Original strand, 3989119 - 3989342
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| || |||||||||||||||    
T  3989119 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcagtctggccggaaatcatggg 3989218  T
Q  102 gtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    ||||||| |||||||||          |||||||||||||||||||||||||||||||| ||| ||||||||| || |||||||||| || |||||||||    
T  3989219 gtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggttattattgtgtcatgtcattcttggatctttcttata 3989318  T
Q  200 aaatcattcttgatatctagcatt 223  Q
    ||||||||||||||||||||||||    
T  3989319 aaatcattcttgatatctagcatt 3989342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 31174857 - 31174633
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||    
T  31174857 caagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagtctgaccggaaatcatgg 31174758  T
Q  101 ggtggtggatgttatgta-nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    |||||||| |||||||||         ||||||||||||||||||||| |||||||||| || | |||||||| || ||||||||||||| |||||||||    
T  31174757 ggtggtgggtgttatgtatttttttttatgaaagattaataaatgagattgaaatctaaaggagtttattgtgtcatgtcattcttgaatctttcttata 31174658  T
Q  200 aaatcattcttgatatctagcattt 224  Q
    |||||||||||||||||||||||||    
T  31174657 aaatcattcttgatatctagcattt 31174633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 13354888 - 13355120
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctc-agcctagccggaaatcatg 99  Q
    ||||||||| ||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||| |||||||||||||    
T  13354888 caagaatgatatggcagaataattacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatctctagcctggccggaaatcatg 13354987  T
Q  100 gggtggtggatgttatgtannnnnnnn---atgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctt 196  Q
    | ||||||| |||||||||           ||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||| || ||||||    
T  13354988 gagtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttggatctttctt 13355087  T
Q  197 ataaaatcattcttgatatctagcattttcctt 229  Q
    |||||||||||||||||||||||||||||||||    
T  13355088 ataaaatcattcttgatatctagcattttcctt 13355120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 21936123 - 21936311
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctc-agcctagccggaaatcatg 99  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||| |||||||||||||    
T  21936123 caagaatgatatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatctctagcctggccggaaatcatg 21936222  T
Q  100 gggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttg 186  Q
    ||||||||| |||||||||          ||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||    
T  21936223 gggtggtgggtgttatgtattttttttttatgaaagattaataaatgaaactgaaatctaaaggtgattattgtgccatgtcattcttg 21936311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 43330954 - 43331183
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||| || | |  ||||||||||||||    
T  43330954 caagaatgacatggcagaataatcacccttagattttatcaagaaattgtactgaaattaatgttagccaataaaatttctgtcgggccggaaatcatgg 43331053  T
Q  101 ggtggtggatgttatgtannnnnnnnatgaa--agattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    |||||||| |||||||||         |  |  |||  |||||||||||||||||||||| |||||||||||| ||| ||||||||||||| ||||||      
T  43331054 ggtggtgggtgttatgtattttttttttttatgagaggaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttga 43331153  T
Q  199 aaaatcattcttgatatctagcattttcct 228  Q
     |||||||||||||||||||||||||||||    
T  43331154 taaatcattcttgatatctagcattttcct 43331183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 9723448 - 9723677
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||| | ||||||||||||||||  ||||||||||||||    
T  9723448 aagaatgacatgacagaataatcacccttaaattttatcaagaaattgtcccgaaattaatgttagctaataaaatctcagcctcaccggaaatcatggg 9723547  T
Q  102 gtggtggatgttatgta---nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctt-a 197  Q
    ||||||| |||||||||           ||||||  | ||||||| |||||||||||||| |||||||||| || || ||||||||| ||| |||||| |    
T  9723548 gtggtgggtgttatgtatttttttttttatgaaaagtgaataaataagactgaaatctaaaggtgattattctgtcatgtcattcttaaatatttcttga 9723647  T
Q  198 taaaatcattcttgatatctagcattttcc 227  Q
    | ||||||||||||||||||| ||||||||    
T  9723648 tcaaatcattcttgatatctaacattttcc 9723677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 2 - 225
Target Start/End: Complemental strand, 21393710 - 21393483
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    ||||||||||||  |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||  | |  |||||||||||||||    
T  21393710 aagaatgacatggtagaataatcacccttagattttatcaagaaattgtactgaaattaatgttaaccaataaaatctatgtcgggccggaaatcatggg 21393611  T
Q  102 gtggtggatgttatg-------tannnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttc 194  Q
    ||||||| |||||||       ||        |||||||   |||||||||||||||||| ||| ||||||||||||| || |||||||||||| |||||    
T  21393610 gtggtgggtgttatgtattttttattttttttatgaaag--gaataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaa-ttttc 21393514  T
Q  195 ttataaaatcattcttgatatctagcatttt 225  Q
    ||   ||||||||||||||||||||||||||    
T  21393513 ttgataaatcattcttgatatctagcatttt 21393483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 14941389 - 14941199
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||| ||| |||||||||     
T  14941389 caagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttagccaat-aaatctcagcctggccagaaatcatga 14941291  T
Q  101 ggtggtggatgttatgta-----nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttga 187  Q
    |||||||| |||||||||             ||||||| ||||||||| ||| |||||||||| | ||||||||||| || |||||||||||    
T  14941290 ggtggtgggtgttatgtattttttttattttatgaaaggttaataaataagattgaaatctaaggatgattattgtgtcatgtcattcttga 14941199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 27847674 - 27847791
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||  |||||||||||||||||  || ||||||||||    
T  27847674 caagaatgacatgacagaataatcaccgttagattttatcaaaaaattgtcctgaaattaatgttagtcaataaaatctcagcctgaccagaaatcatgg 27847773  T
Q  101 ggtggtggatgttatgta 118  Q
    |||||||| |||||||||    
T  27847774 ggtggtgggtgttatgta 27847791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 22591524 - 22591631
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||| ||| |||||||||| |||||| ||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  22591524 caagaatgatatggcagaataatcccccttaaattttattaagaaattgtcctgaaattaatgttagccaataaaatctcagcctagcaggaaatcatgg 22591623  T
Q  101 ggtggtgg 108  Q
    ||||||||    
T  22591624 ggtggtgg 22591631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 16 - 196
Target Start/End: Complemental strand, 16767480 - 16767288
Alignment:
Q  16 agaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggggtggtggatgttat 115  Q
    ||||||||||| |||| |||||||||||||||  ||||||||||||||||| ||||||||||||||| || |||||||||||| ||||||||| ||||||    
T  16767480 agaataatcactcttaaattttatcaagaaattatcctgaaattaatgttagccaataaaatctcagtctggccggaaatcatagggtggtgggtgttat 16767381  T
Q  116 gta------------nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctt 196  Q
    |||                    ||||||| ||||||||||||||||||||||||  |||||||||||| || ||||||||||||| ||||||    
T  16767380 gtatttttattttattttattttatgaaaggttaataaatgagactgaaatctaagagtgattattgtgtcatgtcattcttgaatctttctt 16767288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 127 - 229
Target Start/End: Original strand, 22592880 - 22592985
Alignment:
Q  127 atgaaagattaataaatgagactgaaa--tctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    ||||||| ||||||||| |||||||||  ||||| ||||||||||||| || ||||||||||||| |||||| |||||||||||||||||||||||||||    
T  22592880 atgaaaggttaataaataagactgaaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 22592979  T
Q  224 ttcctt 229  Q
    ||||||    
T  22592980 ttcctt 22592985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 31 - 229
Target Start/End: Complemental strand, 40262729 - 40262529
Alignment:
Q  31 agattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggggtggtggatgttatgta--nnnnnnnnat 128  Q
    ||||||||||||||||| |||| ||||||||| ||| |||||||||||||| |||  |||||||| |||||||||||| |||||||||          ||    
T  40262729 agattttatcaagaaattgtcccgaaattaatattagccaataaaatctcaccctgaccggaaattatggggtggtgggtgttatgtatttattttttat 40262630  T
Q  129 gaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 228  Q
    ||||  |||| |||| | ||||||||||||  || |||||| | ||| |||||||||||||   || |  |||  |||||||||||||||||||||||||    
T  40262629 gaaacgttaacaaataaaactgaaatctaagagttattattctaccatgtcattcttgaatccatcgtgaaaatccattcttgatatctagcattttcct 40262530  T
Q  229 t 229  Q
    |    
T  40262529 t 40262529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 137 - 229
Target Start/End: Complemental strand, 34321042 - 34320961
Alignment:
Q  137 aataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctt 229  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||           |||||||||||||||||||||||||||||||    
T  34321042 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttga-----------aaaatcattcttgatatctagcattttcctt 34320961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 14941354 - 14941427
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| ||||||||||||| |||||| |||||||| |||||||||| |||||||    
T  14941354 aaatctaagggtgattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatatatagcatt 14941427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 39819272 - 39819317
Alignment:
Q  182 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 227  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||    
T  39819272 tcttgaatttttcttataaaatcattcttgatatctaacattttcc 39819317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 37335755 - 37335829
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaa 75  Q
    ||||||||||||| ||||||||||||  ||||||| |||||| |||| || |||| |||||||||| ||||||||    
T  37335755 caagaatgacatggcagaataatcacttttagattgtatcaaaaaattgttctgatattaatgttagccaataaa 37335829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 9293564 - 9293637
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| ||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  9293564 aaatctaagggtgattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatatatagcatt 9293637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 21936158 - 21936085
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| |||||  ||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  21936158 aaatctaagggtgattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcatt 21936085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 23268050 - 23268123
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  23268050 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 23268123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 31174822 - 31174887
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatat 215  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||| |||||||| ||||||||||    
T  31174822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatat 31174887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 43330989 - 43330916
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| ||||||||||||||||| || | |||||| |||||||||| |||||||    
T  43330989 aaatctaagggtgattattctgccatgtcattcttgaattttttttgagaaaatctttcttgatatatagcatt 43330916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 206
Target Start/End: Original strand, 37335824 - 37335894
Alignment:
Q  137 aataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcat 206  Q
    |||||||||||||||||||||| |||||||| |||| || |||||| || ||| |||||| ||||||||||    
T  37335824 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattattaaatctttcttgataaaatcat 37335894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 27847709 - 27847644
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatat 215  Q
    ||||||||||||||||||| || || ||||||||||||| |||||| |||||||| ||||| ||||    
T  27847709 aaatctaacggtgattattctgtcatgtcattcttgaatctttcttaataaaatctttctttatat 27847644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 22592941 - 22592905
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagatttt 37  Q
    |||||||||||||||| ||||||||||||||||||||    
T  22592941 caagaatgacatgacacaataatcacccttagatttt 22592905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 9293411 - 9293446
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattt 36  Q
    |||||||||||||||| |||||||||||||||||||    
T  9293411 caagaatgacatgacacaataatcacccttagattt 9293446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 36
Target Start/End: Complemental strand, 9723634 - 9723600
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattt 36  Q
    |||||||||||||||||||||||||| ||||||||    
T  9723634 aagaatgacatgacagaataatcacctttagattt 9723600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 7475496 - 7475569
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| |  || |||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  7475496 aaatctaagggtgattattctatcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 7475569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 13354923 - 13354858
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatat 215  Q
    |||||||| ||| |||||| |||||  ||||||||||| ||||||| |||||||| ||||||||||    
T  13354923 aaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatat 13354858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 229
Target Start/End: Original strand, 27847801 - 27847833
Alignment:
Q  197 ataaaatcattcttgatatctagcattttcctt 229  Q
    ||||||| |||||||||||||||||||||||||    
T  27847801 ataaaattattcttgatatctagcattttcctt 27847833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 168; Significance: 8e-90; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 3137437 - 3137207
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3137437 caagaatgacatggcaaaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatgg 3137338  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    |||| ||| |||||||||          |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  3137337 ggtgatgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttat 3137238  T
Q  199 aaaatcattcttgatatctagcattttcctt 229  Q
    |||||||||||||||||||||||||||||||    
T  3137237 aaaatcattcttgatatctagcattttcctt 3137207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 6041926 - 6042149
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||    
T  6041926 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagcctgaccggaaatcatgg 6042025  T
Q  101 ggtggtggatgttatgtannnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttataa 200  Q
    |||||||| |||||| |         |||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||| || ||||||||||    
T  6042026 ggtggtggttgttattt-----ttttatgaaaaattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataa 6042120  T
Q  201 aatcattcttgatatctagcattttcctt 229  Q
    |||||||||||||||||||||||||||||    
T  6042121 aatcattcttgatatctagcattttcctt 6042149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 5 - 229
Target Start/End: Complemental strand, 22426363 - 22426138
Alignment:
Q  5 aatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggggtg 104  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||| || ||||||||||||||||||    
T  22426363 aatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatttcagtctggccggaaatcatggggtg 22426264  T
Q  105 gtggatgttatgtannnnnnnn-atgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttataaaat 203  Q
    |||| |||||||||         ||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||| |||||||||||||    
T  22426263 gtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttgaatctttcttataaaat 22426164  T
Q  204 cattcttgatatctagcattttcctt 229  Q
    ||||||||||||||||||||||||||    
T  22426163 cattcttgatatctagcattttcctt 22426138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 33113835 - 33114066
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| || ||||||||||||||    
T  33113835 caagaattacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatttcagtctggccggaaatcatgg 33113934  T
Q  101 ggtggtggatgttatgta---nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctta 197  Q
    |||||||| |||||||||           ||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||| |||||||    
T  33113935 ggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctta 33114034  T
Q  198 taaaatcattcttgatatctagcattttcctt 229  Q
    ||||||||||||||||||||||||||||||||    
T  33114035 taaaatcattcttgatatctagcattttcctt 33114066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 37522096 - 37522323
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||| |||||    
T  37522096 aagaatgacatgacagaataatcaccctaagattttataaagaaatagtcatgaaattaatgttaaccaataaaatctcaacctggccggaaattatggg 37522195  T
Q  102 gtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    ||||||| |||||||||          |||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||| |||||||||||||    
T  37522196 gtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattatgccatgtcattcttaaatttttcttata 37522295  T
Q  200 aaatcattcttgatatctagcattttcc 227  Q
    ||||||||||||||||||||||||||||    
T  37522296 aaatcattcttgatatctagcattttcc 37522323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 2 - 229
Target Start/End: Original strand, 3456107 - 3456336
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||    
T  3456107 aagaatgatatggcagaataatcacccttagattttatcaagaaatagtcctggaattaatgttaaccaataaaatctcagtctggccggaaatcatggg 3456206  T
Q  102 gtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    ||||||| |||||||||          |||||||||||||||||||||||||||||||| | |||||| |||| || ||||||||||||| |||||||||    
T  3456207 gtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaagatgattagtgtgtcatgtcattcttgaatctttcttata 3456306  T
Q  200 aaatcattcttgatatctagcattttcctt 229  Q
    ||||||||||||||||||||||||||||||    
T  3456307 aaatcattcttgatatctagcattttcctt 3456336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 2 - 229
Target Start/End: Complemental strand, 37217075 - 37216846
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| || | ||||||| ||    
T  37217075 aagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcatgaaattaatgttaaccaataaaatctcagccttgctgaaaatcatagg 37216976  T
Q  102 gtggtggatgttatgtannnnnnnn--atgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    ||||||| |||||||||          |||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| |||||||||    
T  37216975 gtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttata 37216876  T
Q  200 aaatcattcttgatatctagcattttcctt 229  Q
    ||||||||||||||||||||||||||||||    
T  37216875 aaatcattcttgatatctagcattttcctt 37216846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 2754760 - 2754989
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  2754760 aagaatgacatggcagaataatcacctttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctgaccggaaatcatggg 2754859  T
Q  102 gtggtggatgttatgta----nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctta 197  Q
    || |||| |||||||||            |||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||| ||| |||||||    
T  2754860 gtagtgggtgttatgtattttttttttttatgaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttaaatctttctta 2754959  T
Q  198 taaaatcattcttgatatctagcattttcc 227  Q
    |||||| |||||||||||||||||||||||    
T  2754960 taaaatgattcttgatatctagcattttcc 2754989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 2 - 227
Target Start/End: Complemental strand, 3574549 - 3574321
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaa-ttaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| | ||||||||||||||    
T  3574549 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaaattaatgttagccaataaaatctcagcttggccggaaatcatgg 3574450  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    |||||||| |||||||||          |||||||||||||||||||||||||||||||  ||||||||||||| || |||||||||| || ||||||||    
T  3574449 ggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctagaggtgattattgtgtcatgtcattcttggatctttcttat 3574350  T
Q  199 aaaatcattcttgatatctagcattttcc 227  Q
    |||||||||||||||||||||||||||||    
T  3574349 aaaatcattcttgatatctagcattttcc 3574321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 3089460 - 3089689
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||| | |||||||||||||||    
T  3089460 aagaatgacatggcagaataatcacccttagattttatcaagaaatattcttgaaattaatgttagccaataaaatctcagcttggccggaaatcatggg 3089559  T
Q  102 gtggtggatgttatgta----nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctta 197  Q
    ||||||| || ||||||            |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||  || |||||||    
T  3089560 gtggtgggtgctatgtattatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttctta 3089659  T
Q  198 taaaatcattcttgatatctagcattttcc 227  Q
    ||||||||||||||||||||||||||||||    
T  3089660 taaaatcattcttgatatctagcattttcc 3089689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 2 - 229
Target Start/End: Original strand, 48160948 - 48161178
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||| ||||||    
T  48160948 aagaatgatatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatattagccaataaaatctcagcctagccggaaaccatggg 48161047  T
Q  102 gtggtggatgttatgta---nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    ||||||| |||||||||           |||||| ||||||||||||||||||||||||| ||||||||||||| || ||| |||||| || ||||||||    
T  48161048 gtggtgggtgttatgtatttttttttttatgaaaaattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcgttcttggatatttcttat 48161147  T
Q  199 aaaatcattcttgatatctagcattttcctt 229  Q
    |||||||||||||||||||||||||||||||    
T  48161148 aaaatcattcttgatatctagcattttcctt 48161178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 2 - 227
Target Start/End: Complemental strand, 19650922 - 19650695
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaa-ttaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    |||||||||||| ||||||||||||| |||||||||||||||||| |||| ||||| ||||||||| || ||||||||||||| | ||||||||||||||    
T  19650922 aagaatgacatggcagaataatcaccattagattttatcaagaaacagtcttgaaaattaatgttagccgataaaatctcagcttggccggaaatcatgg 19650823  T
Q  101 ggtggtggatgttatgtannnnnnnn-atgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    |||||||| |||||||||         |||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||| || |||||||||    
T  19650822 ggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttata 19650723  T
Q  200 aaatcattcttgatatctagcattttcc 227  Q
    ||||||||||||||||||||||||||||    
T  19650722 aaatcattcttgatatctagcattttcc 19650695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 2 - 225
Target Start/End: Original strand, 33145755 - 33145980
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||  |||||||| ||| |    
T  33145755 aagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcctgaccggaaattatgag 33145854  T
Q  102 gtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    ||||||| || ||||||          ||||||| ||||||||| |||||||||||||| ||||||||||||| || ||||||||||||| |||||||||    
T  33145855 gtggtgggtggtatgtattttttttttatgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttata 33145954  T
Q  200 aaatcattcttgatatctagcatttt 225  Q
    ||||||||||||||||||||||||||    
T  33145955 aaatcattcttgatatctagcatttt 33145980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 2 - 226
Target Start/End: Complemental strand, 8320606 - 8320378
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||| ||| || |||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||| |||||||||||    
T  8320606 aagaatgatatggcaaaataatcacccttaaattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcagcctggccagaaatcatggg 8320507  T
Q  102 g-tggtggatgttatgtannnnnnnn---atgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctta 197  Q
    | | |||| |||||||||           |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||    
T  8320506 ggtagtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctta 8320407  T
Q  198 taaaatcattcttgatatctagcattttc 226  Q
    |||||||||| ||||||||||||||||||    
T  8320406 taaaatcattattgatatctagcattttc 8320378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 2 - 229
Target Start/End: Complemental strand, 36865049 - 36864825
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    ||||||||||||  ||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||| ||||||||    |||||||||||||||    
T  36865049 aagaatgacatggtagaataatcacccttaggttttatcaaaaaatagtcctgaaattaatgttagccaatagaatctcag----gccggaaatcatggg 36864954  T
Q  102 gtggtggatgttatgtannnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaat-ttttcttataa 200  Q
     |||||| |||||||||        ||||||  |||||||||||||||||||||||| ||||||||||||| || ||||||||||||| |||| | ||||    
T  36864953 atggtgggtgttatgtattttttatatgaaatgttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatcttttttgataa 36864854  T
Q  201 aatcattcttgatatctagcattttcctt 229  Q
    |||||||||||||||||||||||||||||    
T  36864853 aatcattcttgatatctagcattttcctt 36864825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 5 - 227
Target Start/End: Original strand, 42297909 - 42298122
Alignment:
Q  5 aatgacatga-cagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggggt 103  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||    
T  42297909 aatgacatgatcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagtctggccggaaatcatggggt 42298008  T
Q  104 ggtggatgttatgtannnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttataaaat 203  Q
    ||| |||||||||||        ||||||| |||||||||||||||||||||||| |||| |||||||| || ||||||||||          |||||||    
T  42298009 ggtagatgttatgtattttttttatgaaaggttaataaatgagactgaaatctaagggtggttattgtgtcatgtcattcttg----------ataaaat 42298098  T
Q  204 cattcttgatatctagcattttcc 227  Q
    |||||||||||| |||||||||||    
T  42298099 cattcttgatatttagcattttcc 42298122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 47738147 - 47738382
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||| ||| ||||||||| ||| ||||||||||| || |||| |||||||||||||||||| ||||||||||||||||||  || ||||||||||    
T  47738147 caagaatgatatggcagaataattacctttagattttataaaaaaattgtcctgaaattaatgttagccaataaaatctcagcctgaccagaaatcatgg 47738246  T
Q  101 ggtggtggatgttatgta--------nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttt 192  Q
    |||||||| |||||||||                ||||||| |||||||||||||||||||||||| | |||||||||||||| ||||||||||||| ||    
T  47738247 ggtggtgggtgttatgtatttttttttattttttatgaaaggttaataaatgagactgaaatctaaggatgattattgtgccatgtcattcttgaatctt 47738346  T
Q  193 tctt-ataaaatcattcttgatatctagcattttcc 227  Q
    |||| |||||||||||||||||||||| ||||||||    
T  47738347 tcttgataaaatcattcttgatatctaacattttcc 47738382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 30385057 - 30385170
Alignment:
Q  5 aatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggggtg 104  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  30385057 aatgacatggcagaataatcacccttatattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggggtg 30385156  T
Q  105 gtggatgttatgta 118  Q
    |||| |||||||||    
T  30385157 gtgggtgttatgta 30385170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 8362068 - 8361832
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||| | |  ||||||||||||||    
T  8362068 caagaatgacatggcagaataatcacccttagattttatcaagaaattgtactgaaattaatgttagccaataaaatctctgtcgggccggaaatcatgg 8361969  T
Q  101 ggtggtggatgttatgta----------nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatt 190  Q
    |||||||| ||| |||||                  |||||  || |||||||||||||||||||||| ||||||||||||| || |||||||||||||     
T  8361968 ggtggtgggtgtcatgtattttttttttttttttttatgaa--atgaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaata 8361871  T
Q  191 tttcttataaaatcattcttgatatctagcattttcctt 229  Q
    ||||||   ||||||||||||||||||||||||||||||    
T  8361870 tttcttgataaatcattcttgatatctagcattttcctt 8361832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 127 - 229
Target Start/End: Complemental strand, 34482783 - 34482681
Alignment:
Q  127 atgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 226  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34482783 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 34482684  T
Q  227 ctt 229  Q
    |||    
T  34482683 ctt 34482681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 2 - 215
Target Start/End: Original strand, 33839574 - 33839794
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||| ||  |||||||||||||| ||||||||||||||  || |||| ||||||||||    
T  33839574 aagaataacatgacagaataatcaccattagattttatcaagaaattgttttgaaattaatgttagccaataaaatctcaatctggccgtaaatcatggg 33839673  T
Q  102 gtggtggatgttatgta------nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttct 195  Q
    ||||| | |||||||||              ||||||| |||||||||||||||||||| ||| ||||||||||||| || ||||||||||||| |||||    
T  33839674 gtggtaggtgttatgtattttttctttttttatgaaaggttaataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaatctttct 33839773  T
Q  196 t-ataaaatcattcttgatat 215  Q
    | |||||||||||||||||||    
T  33839774 tgataaaatcattcttgatat 33839794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 42297396 - 42297513
Alignment:
Q  2 aagaatgacatgac-agaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||  |||||||||||||    
T  42297396 aagaatgacatgactagaataatcacccttagattttatcaagaaatagttctgaaattaatgttagccaataaaatctcagcctgaccggaaatcatgg 42297495  T
Q  101 ggtggtggatgttatgta 118  Q
    ||||||||||||||||||    
T  42297496 ggtggtggatgttatgta 42297513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 34482933 - 34482826
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  34482933 caagaatgatatggtagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatgg 34482834  T
Q  101 ggtggtgg 108  Q
    ||||||||    
T  34482833 ggtggtgg 34482826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 9797052 - 9796824
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||| || || |||||||||||| ||||||||||||| | |  |||| |||||||||    
T  9797052 caagaatgacatggcagaataatcaccattagattttatcaagaaattgtacttaaattaatgttagccaataaaatctctgtcgggccgaaaatcatgg 9796953  T
Q  101 ggtggtggatgttatgta----nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctt 196  Q
    |||||||| | |||||||            |||||||   ||||||||||||||||||||||  |||||||||||| || ||||||||||||| ||||||    
T  9796952 ggtggtgggtcttatgtatttttcttttttatgaaag--gaataaatgagactgaaatctaagagtgattattgtgacatgtcattcttgaatctttctt 9796855  T
Q  197 ataaaatcattcttgatatctagcattttcc 227  Q
       ||||||||||||||||||||||||||||    
T  9796854 gataaatcattcttgatatctagcattttcc 9796824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 31 - 229
Target Start/End: Original strand, 40327897 - 40328104
Alignment:
Q  31 agattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggggtggtggatgttatgtannnnnnnn---- 126  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||| ||| |||||||||||| ||||||||| |||||||||                
T  40327897 agattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcaacctggccggaaatcatagggtggtgggtgttatgtattttatttttat 40327996  T
Q  127 ----atgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagca 221  Q
        || |||| | ||||||| |||||||||||||| ||||||||||||| || ||||||||||||| |||||| |||||||||||||||||||||||||    
T  40327997 ttttatcaaaggtaaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagca 40328096  T
Q  222 ttttcctt 229  Q
    ||||||||    
T  40328097 ttttcctt 40328104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 87 - 227
Target Start/End: Original strand, 30385529 - 30385670
Alignment:
Q  87 gccggaaatcatggggtggtggatgttatgtannnnnnnn-atgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattctt 185  Q
    |||||||||||||||||||||| |||||||||         |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  30385529 gccggaaatcatggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 30385628  T
Q  186 gaatttttcttataaaatcattcttgatatctagcattttcc 227  Q
    |||| ||||||||||||||||||||||||| |||||||||||    
T  30385629 gaatctttcttataaaatcattcttgatatttagcattttcc 30385670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 41883246 - 41883031
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||| |||| |||||||||||||  |||||||||||||| || ||  ||||||||||    
T  41883246 caagaatgacatggcagaataatcacccttaaattttatcaagaaattgtcccgaaattaatgttagtcaataaaatctcagactggctagaaatcatgg 41883147  T
Q  101 ggtggtggatgttatgta---nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctt- 196  Q
    |||||||| |||||||||           || |||| || |||||| ||||||||||| || | |||||||| | ||| ||||||||||||| ||||||     
T  41883146 ggtggtgggtgttatgtatttttttttttataaaaggttgataaataagactgaaatccaaagatgattattttaccatgtcattcttgaatctttcttc 41883047  T
Q  197 ataaaatcattcttga 212  Q
    ||||||||||| ||||    
T  41883046 ataaaatcatttttga 41883031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 11347311 - 11347427
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||  | ||  |||||||||||    
T  11347311 aagaatgacatggcagaataataacccttagattttatcaggaaatagtcctgaaattaatgttagccaataaaatctcagagtggctagaaatcatggg 11347410  T
Q  102 gtggtggatgttatgta 118  Q
    ||||||| |||||||||    
T  11347411 gtggtgggtgttatgta 11347427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 15 - 227
Target Start/End: Original strand, 24343603 - 24343820
Alignment:
Q  15 cagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggggtggtggatgtta 114  Q
    |||||||||||| |||||||||||||||||||| || | ||||||||||||| |||||||||||||| |||  ||| ||||||| ||||||||| |||||    
T  24343603 cagaataatcactcttagattttatcaagaaattgttccgaaattaatgttagccaataaaatctcatcctgaccgaaaatcatcgggtggtgggtgtta 24343702  T
Q  115 tgta----nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaat-ttttcttataaaatcattct 209  Q
    ||||             |||||| ||||||||| |||||||||||||| |||||||||  |  || ||||||||||||| |||| | |||||||||||||    
T  24343703 tgtattttttttttttttgaaaggttaataaataagactgaaatctaagggtgattatcatatcatgtcattcttgaatcttttttgataaaatcattct 24343802  T
Q  210 tgatatctagcattttcc 227  Q
    ||||||||| ||||||||    
T  24343803 tgatatctaacattttcc 24343820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 41224275 - 41224505
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    |||||||||||||  ||||| |||||||||  ||||||| ||||||| ||  |||||||||||||| | ||||||||||| |    | ||||||||||||    
T  41224275 caagaatgacatggtagaattatcacccttgaattttattaagaaattgtattgaaattaatgttagctaataaaatctctgttgggtcggaaatcatgg 41224374  T
Q  101 ggtggtggatgttatgtannnnnnnn-----atgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttct 195  Q
    |||||||| |||||||||             ||||||||  ||||||||||| |||||| ||| |||||||||||||||| ||||||||||||| |||||    
T  41224375 ggtggtgggtgttatgtatttttttttttttatgaaaga--aataaatgagattgaaatttaagggtgattattgtgccatgtcattcttgaatatttct 41224472  T
Q  196 tataaaatcattcttgatatctagcattttcct 228  Q
    |   |||||||||||||||||||||||||||||    
T  41224473 tgataaatcattcttgatatctagcattttcct 41224505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 5 - 226
Target Start/End: Original strand, 46918948 - 46919164
Alignment:
Q  5 aatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggggtg 104  Q
    ||||| |||| |||||||| ||| ||||||||||||||||||| |||  ||||||||||||| | |||||||| |     | || |||||||||||||||    
T  46918948 aatgatatgatagaataattacctttagattttatcaagaaattgtctcgaaattaatgttagcaaataaaatgt-----tggctggaaatcatggggtg 46919042  T
Q  105 gtggatgttatgtannnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaat-ttttcttataaaat 203  Q
    ||||||||||| ||        |||| |||||||||||| |||| ||||||||  |||||||||| ||||| |||||| |||||| |||| | |||||||    
T  46919043 gtggatgttatatatatattt-atgatagattaataaataagaccgaaatctagaggtgattattctgccatgtcattattgaatcttttttgataaaat 46919141  T
Q  204 cattcttgatatctagcattttc 226  Q
    ||||||||||||||| |||||||    
T  46919142 cattcttgatatctaacattttc 46919164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 127 - 227
Target Start/End: Original strand, 26612916 - 26613017
Alignment:
Q  127 atgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 225  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||| || |||||||||| |||||| ||||||||||| |||||||||| ||||||    
T  26612916 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgttattcttgaatctttcttaataaaatcattattgatatctaacatttt 26613015  T
Q  226 cc 227  Q
    ||    
T  26613016 cc 26613017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 42921295 - 42921394
Alignment:
Q  127 atgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 225  Q
    ||||||| |||||||||||||||||||| ||| ||||||| |||||||| ||||||||| ||| |||||| |||||||||||||| ||||||||||||||    
T  42921295 atgaaaggttaataaatgagactgaaatttaagggtgattgttgtgccatgtcattcttaaatatttcttgataaaatcattcttaatatctagcatttt 42921394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 85
Target Start/End: Original strand, 42921186 - 42921269
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcct 85  Q
    |||||||||||||| |||| ||  || ||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||    
T  42921186 aagaatgacatgaccgaatgattgcctttagattttatcaagaaattgtcctgaatttaatgttagccaataaaatctcagcct 42921269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 3137402 - 3137475
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  3137402 aaatctaagggtgattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 3137475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 6041961 - 6041888
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| || || |||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  6041961 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 6041888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 9797017 - 9797082
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatat 215  Q
    |||||||| |||||||||| ||||| |||||||||||||||||||| | |||||| ||||||||||    
T  9797017 aaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatat 9797082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 196
Target Start/End: Original strand, 8362033 - 8362078
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt 196  Q
    |||||||| |||||||||| ||||| ||||||||||||||||||||    
T  8362033 aaatctaagggtgattattctgccatgtcattcttgaatttttctt 8362078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 8361875 - 8361910
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattt 36  Q
    |||||||||||||||| |||||||||||||||||||    
T  8361875 caagaatgacatgacacaataatcacccttagattt 8361910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 26612827 - 26612890
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgt 64  Q
    ||||||||||||| |||||||| ||   ||||||||||| || |||||||||| ||||||||||    
T  26612827 caagaatgacatggcagaataaccatttttagattttattaaaaaatagtccttaaattaatgt 26612890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 33145941 - 33145906
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattt 36  Q
    |||||||||||||||| |||||||||||||||||||    
T  33145941 caagaatgacatgacacaataatcacccttagattt 33145906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 36864869 - 36864904
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattt 36  Q
    |||||||||||||||| |||||||||||||||||||    
T  36864869 caagaatgacatgacacaataatcacccttagattt 36864904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 40328060 - 40328025
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattt 36  Q
    |||||||||||||||| |||||||||||||||||||    
T  40328060 caagaatgacatgacacaataatcacccttagattt 40328025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 34482898 - 34482971
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| | |||  ||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  34482898 aaatctaagggtgattattctaccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 34482971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 196
Target Start/End: Original strand, 41883211 - 41883256
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt 196  Q
    |||| ||| |||||||||| ||||| ||||||||||||||||||||    
T  41883211 aaatttaagggtgattattctgccatgtcattcttgaatttttctt 41883256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 47738182 - 47738117
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatat 215  Q
    |||||||| ||| |||||| |||||  |||||||||||| |||||| |||||||| ||||||||||    
T  47738182 aaatctaaaggtaattattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 164; Significance: 2e-87; HSPs: 6)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 25978 - 26208
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||    
T  25978 caagaatgacatggcagaataatcacccttagattttatcaagaaatagttctgaaattaatgttaaccaataaaatctcaggctggccggaaatcatgg 26077  T
Q  101 ggtggtggatgttatgtannnnnnnn--atgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    | |||||| |||||||||          |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  26078 gatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttat 26177  T
Q  199 aaaatcattcttgatatctagcattttcctt 229  Q
    |||||||||||||||||||||||||||||||    
T  26178 aaaatcattcttgatatctagcattttcctt 26208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 16026 - 16256
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||    
T  16026 caagaatgacatggcagaataatcacccttagattttatcaagaaatagttctgaaattaatgttaaccaataaaatctcaggctggccggaaatcatgg 16125  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    | |||||| |||||||||          |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||    
T  16126 gatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttat 16225  T
Q  199 aaaatcattcttgatatctagcattttcctt 229  Q
    |||||||||||||||||||||||||||||||    
T  16226 aaaatcattcttgatatctagcattttcctt 16256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 8444 - 8603
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||    
T  8444 caagaatgacatggcagaataatcacccttagattttatcaagaaatagttctgaaattaatgttaaccaataaaatctcaggctggccggaaatcatgg 8543  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaa 158  Q
    | |||||| |||||||||          ||||||||||||||||||||||||||||||||    
T  8544 gatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaa 8603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 8479 - 8414
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatat 215  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||| |||||||| ||||||||||    
T  8479 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 16061 - 15996
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatat 215  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||| |||||||| ||||||||||    
T  16061 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 26013 - 25948
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatat 215  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||| |||||||| ||||||||||    
T  26013 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 25948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 164; Significance: 2e-87; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 47892 - 48119
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  47892 caagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatgg 47991  T
Q  101 ggtggtggatgttatgta-nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    |||||||| |||||||||         |||||||||||||||||||||||||||||||| | |||||||||||| | ||||||||||||| |||||||||    
T  47992 ggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaagatgattattgtgctatgtcattcttgaatctttcttata 48091  T
Q  200 aaatcattcttgatatctagcattttcc 227  Q
    ||||||||||||||||||||||||||||    
T  48092 aaatcattcttgatatctagcattttcc 48119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 47927 - 47854
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||| |||||||| |||||||||  |||||||    
T  47927 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgataaatagcatt 47854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 162; Significance: 3e-86; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 33696738 - 33696969
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  33696738 caagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagcctggccggaaatcatgg 33696837  T
Q  101 ggtggtggatgttatgta---nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctta 197  Q
    |||||||| |||||||||           |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||| |||||||    
T  33696838 ggtggtgggtgttatgtaattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatctttctta 33696937  T
Q  198 taaaatcattcttgatatctagcattttcctt 229  Q
    ||||||||||||||||||||||||||||||||    
T  33696938 taaaatcattcttgatatctagcattttcctt 33696969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 17176044 - 17175816
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||| ||||||||||||||    
T  17176044 caagaatgacatgacagaataatcacccttagattttatcaagaaataatcatgaaattaatgttagccaataaaatctcagcctggccggaaatcatgg 17175945  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    |||||||| |||||||||          |||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| ||||||||    
T  17175944 ggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttat 17175845  T
Q  199 aaaatcattcttgatatctagcattttcc 227  Q
    |||||||||||||||||||||||||||||    
T  17175844 aaaatcattcttgatatctagcattttcc 17175816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 32702247 - 32702477
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||    
T  32702247 caagaatgatatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatattaaccaataaaatctgagtctagccggaaatcatgg 32702346  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    |||||||| | |||||||          |||||||||||||||||||||||||||||||| ||| ||||||||| || ||||||||||||||||||||||    
T  32702347 ggtggtgggtcttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttgaatttttcttat 32702446  T
Q  199 aaaatcattcttgatatctagcattttcctt 229  Q
    |||||||||||||||||||||||||||||||    
T  32702447 aaaatcattcttgatatctagcattttcctt 32702477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 33695350 - 33695121
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  33695350 caagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagcctggccggaaatcatgg 33695251  T
Q  101 ggtggtggatgttatgta---nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctta 197  Q
    |||||||| |||||||||           |||||||||||||||||||||||||||||||| ||||||||||||| ||  |||||||| ||| |||||||    
T  33695250 ggtggtgggtgttatgtaattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatatcattcttaaatatttctta 33695151  T
Q  198 taaaatcattcttgatatctagcattttcc 227  Q
    ||||||||||||||||||||||||||||||    
T  33695150 taaaatcattcttgatatctagcattttcc 33695121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 2 - 229
Target Start/End: Complemental strand, 17705487 - 17705262
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| || |||||||||||||||    
T  17705487 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagtctggccggaaatcatggg 17705388  T
Q  102 gtggtggatgttatgtannnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttataaa 201  Q
     |||||| |||||||||        ||||||| |||||||||||||||||||||||| ||||||||||||| || ||||||||||||| |||||||||||    
T  17705387 atggtgggtgttatgta-attttttatgaaaggttaataaatgagactgaaatctaa-ggtgattattgtgtcatgtcattcttgaatctttcttataaa 17705290  T
Q  202 atcattcttgatatctagcattttcctt 229  Q
    ||||||||||||||||||||||||||||    
T  17705289 atcattcttgatatctagcattttcctt 17705262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 18365596 - 18365369
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||| ||| ||||||||||||||    
T  18365596 caagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcatcctggccggaaatcatgg 18365497  T
Q  101 ggtggtggatgttatgta-nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    ||| |||| |||||||||         |||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||| || |||||||||    
T  18365496 ggtagtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttata 18365397  T
Q  200 aaatcattcttgatatctagcattttcc 227  Q
    ||||||||||||||||||||||||||||    
T  18365396 aaatcattcttgatatctagcattttcc 18365369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 18370860 - 18370633
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||| ||| ||||||||||||||    
T  18370860 caagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcatcctggccggaaatcatgg 18370761  T
Q  101 ggtggtggatgttatgta-nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    ||| |||| |||||||||         |||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||| || |||||||||    
T  18370760 ggtagtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttata 18370661  T
Q  200 aaatcattcttgatatctagcattttcc 227  Q
    ||||||||||||||||||||||||||||    
T  18370660 aaatcattcttgatatctagcattttcc 18370633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 28675190 - 28675420
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||| ||||||||||||||    
T  28675190 caagaatgacatgtcggaataatcacccttagattttatcaagaaattgtcctgaaattaatgttagctaataaaatctcagcctggccggaaatcatgg 28675289  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    ||||||||  ||||||||          ||||||| |||||||||||||||||||||||| ||||||||||||| || ||||||||||||| ||||||||    
T  28675290 ggtggtgggggttatgtattttttatttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttat 28675389  T
Q  199 aaaatcattcttgatatctagcattttcctt 229  Q
    |||||||||||||||||||||||||||||||    
T  28675390 aaaatcattcttgatatctagcattttcctt 28675420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 2 - 229
Target Start/End: Complemental strand, 23291106 - 23290874
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  23291106 aagaatgacatggcagaataatcacccttagattttatcaagaaatagttctgaaattaatgttaaccaataaaatctcagcctggccagaaatcatggg 23291007  T
Q  102 gtggtggatgttatgta-----nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctt 196  Q
    ||| ||| |||||||||             |||||||||||||||||||||||||||||||| ||| ||||||||||||  |||||||||||| ||||||    
T  23291006 gtgatgggtgttatgtattttcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattgtgccatatcattcttgaatctttctt 23290907  T
Q  197 ataaaatcattcttgatatctagcattttcctt 229  Q
    ||||||||||| |||||||||||||||||||||    
T  23290906 ataaaatcatttttgatatctagcattttcctt 23290874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 2 - 227
Target Start/End: Complemental strand, 2309445 - 2309218
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| | |||||||||||||||    
T  2309445 aagaatggcatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcttggccggaaatcatggg 2309346  T
Q  102 gtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    || |||| |||||||||          ||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||    
T  2309345 gttgtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttata 2309246  T
Q  200 aaatcattcttgatatctagcattttcc 227  Q
    |||||||  |||||||||||||||||||    
T  2309245 aaatcatcgttgatatctagcattttcc 2309218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 2 - 225
Target Start/End: Complemental strand, 6031763 - 6031537
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||    
T  6031763 aagaatgacatgacagaataatcacccttaaattttatcaagaaatagtcttgaaattaatgttaaccaataaaatcccagcctggccggaaatcatggg 6031664  T
Q  102 gtggtggatgttatgta---nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    ||||||| |||||||||           || ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||| ||| ||||    
T  6031663 gtggtgggtgttatgtatttttttttttataaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttat 6031564  T
Q  199 aaaatcattcttgatatctagcatttt 225  Q
    |||||||||||||||||| || |||||    
T  6031563 aaaatcattcttgatatccagtatttt 6031537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 11548611 - 11548386
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| || |||| |||||||||| ||||||||||||| | |  ||||||||||||||    
T  11548611 caagaatgacatggcagaataatcacccttagattttatcaagaaattgtactgatattaatgttagccaataaaatctctgtcgggccggaaatcatgg 11548512  T
Q  101 ggtggtggatgttatgta----nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttctt 196  Q
    ||| |||| |||||||||            |||||||   |||||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||    
T  11548511 ggt-gtgggtgttatgtatttttcttttttatgaaag--gaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcgttctt 11548415  T
Q  197 ataaaatcattcttgatatctagcatttt 225  Q
       ||||||||||||||||||||||||||    
T  11548414 gataaatcattcttgatatctagcatttt 11548386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 2 - 186
Target Start/End: Original strand, 6127318 - 6127506
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctg-aaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||| ||||  | ||| ||||||||||    
T  6127318 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaaattaatgttagccaataaaatatcagtttggccagaaatcatgg 6127417  T
Q  101 ggtggtggatgttatgta---nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttg 186  Q
    |||||||| |||||||||           ||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||    
T  6127418 ggtggtgggtgttatgtatttttttttatatgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttg 6127506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 9752268 - 9752110
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||| ||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  9752268 caagaatgatatggcagaataatcacccttagattttattaagaaattgtcctgaaattaatgttagccaataaaatctcagcctggccggaaatcatgg 9752169  T
Q  101 ggtggtggatgttatgta-nnnnnnnnatgaaagattaataaatgagactgaaatctaa 158  Q
    |||| ||| |||||||||         ||||||| ||||||||||||||||||||||||    
T  9752168 ggtgatgggtgttatgtatttttttttatgaaaggttaataaatgagactgaaatctaa 9752110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 25986972 - 25987089
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| || ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  25986972 caagaatgacatggcaaaataatcactcttaaattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtctggccggaaatcatgg 25987071  T
Q  101 ggtggtggatgttatgta 118  Q
    |||||||| |||||||||    
T  25987072 ggtggtgggtgttatgta 25987089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 2 - 182
Target Start/End: Complemental strand, 8515747 - 8515567
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||  || |||||||||||||||| |||| ||||||||||||| ||||||||||||||||||   |||||||||||||    
T  8515747 aagaatgacatggcagaataatcacattt-gattttatcaagaaattgtcccgaaattaatgttagccaataaaatctcagcctgatcggaaatcatggg 8515649  T
Q  102 gtggtggatgttatgta-nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcatt 182  Q
    |||||||||||||||||         ||||||  ||||||||| ||||||||||||||  ||||||||| | ||| ||||||    
T  8515648 gtggtggatgttatgtatttttttttatgaaatgttaataaataagactgaaatctaagagtgattattctaccatgtcatt 8515567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 70 - 189
Target Start/End: Complemental strand, 18889597 - 18889477
Alignment:
Q  70 aataaaatctcagcctagccggaaatcatggggtggtggatgttatgtannnnnnnn-atgaaagattaataaatgagactgaaatctaacggtgattat 168  Q
    |||||||||||||||| |||||||||||||||||||||| | |||||||         |||||||||||||||||||||||||||||||| |||||||||    
T  18889597 aataaaatctcagccttgccggaaatcatggggtggtgggttttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattat 18889498  T
Q  169 tgtgccacgtcattcttgaat 189  Q
    ||||||| |||||||||||||    
T  18889497 tgtgccatgtcattcttgaat 18889477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 63 - 229
Target Start/End: Original strand, 29693542 - 29693718
Alignment:
Q  63 gttaaccaataaaatctcagcctagccggaaatcatggggtggtggatgttatgtannnnnnnn---------atgaaagattaataaatgagactgaaa 153  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||                 |||||||  |||||||| |||||||||    
T  29693542 gttagccaataaaatctcagcctggccggaaatcatggggtggtggatgttatgtattttatttttattttttatgaaaggataataaataagactgaaa 29693641  T
Q  154 tctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcctt 229  Q
    ||||| ||| |||||| ||||| ||||||||| ||| |||||| |||||||||||||||||||||||||||||||||    
T  29693642 tctaagggtcattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctagcattttcctt 29693718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 33695315 - 33695388
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  33695315 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 33695388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 33696773 - 33696700
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| |||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  33696773 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 33696700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 34238948 - 34238883
Alignment:
Q  161 gtgattattgtgccacgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 226  Q
    |||||||||||| || ||||||||||||| ||  | ||||||||||||||||||||||||||||||    
T  34238948 gtgattattgtgtcatgtcattcttgaatcttcttgataaaatcattcttgatatctagcattttc 34238883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 582602 - 582522
Alignment:
Q  149 tgaaatctaacggtgattattgtgcc-acgtcattcttgaatttttctta-taaaatcattcttgatatctagcattttcc 227  Q
    |||||||||| |||||||||| |||| |  |||||||| ||||||||||| ||||||||||||||||||||| ||||||||    
T  582602 tgaaatctaatggtgattattctgcccatatcattcttaaatttttcttaataaaatcattcttgatatctaacattttcc 582522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 11548576 - 11548647
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagca 221  Q
    |||||||| |||||||||| ||||| |||||||||||||||||||| | |||||  |||||||||| |||||    
T  11548576 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatttttcttgatatatagca 11548647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 161 - 223
Target Start/End: Complemental strand, 25986997 - 25986934
Alignment:
Q  161 gtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    ||||||||| ||||| |||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  25986997 gtgattattttgccatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 25986934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 17176009 - 17176082
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| || || |||||||||||| |||| || |||||||| |||||||||| |||||||    
T  17176009 aaatctaagggtgattattctgtcatgtcattcttgaaattttattgataaaatctttcttgatatatagcatt 17176082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 18365561 - 18365634
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttg-aatttttcttataaaatcattcttgatatctagcatt 223  Q
    |||| ||| |||||||||| ||||| |||||||||| ||||||| | |||||||| |||||||||| |||||||    
T  18365561 aaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 18365634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 18370825 - 18370898
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttg-aatttttcttataaaatcattcttgatatctagcatt 223  Q
    |||| ||| |||||||||| ||||| |||||||||| ||||||| | |||||||| |||||||||| |||||||    
T  18370825 aaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 18370898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 28675225 - 28675152
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| ||||||||||  | || |||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  28675225 aaatctaagggtgattattccgacatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 28675152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 18889685 - 18889757
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttcttataaaatcattcttgatatctagcatt 223  Q
    |||||||| ||| |||||| ||||| |||||||||||| |||||||   ||||| |||||||||| |||||||    
T  18889685 aaatctaagggttattattctgccatgtcattcttgaaattttcttgataaatctttcttgatatatagcatt 18889757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 2121055 - 2121004
Alignment:
Q  177 gtcattcttgaat-ttttcttataaaatcattcttgatatctagcattttcc 227  Q
    ||||||||||||| |||| ||||||||||||| |||||||||| ||||||||    
T  2121055 gtcattcttgaatctttttttataaaatcatttttgatatctaacattttcc 2121004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 28675377 - 28675342
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattt 36  Q
    |||||||||||||||| |||||||||||||||||||    
T  28675377 caagaatgacatgacacaataatcacccttagattt 28675342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 196
Target Start/End: Original strand, 9752233 - 9752278
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt 196  Q
    |||||||| |||||||||| |||||  |||||||||||||||||||    
T  9752233 aaatctaagggtgattattctgccatatcattcttgaatttttctt 9752278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 18889720 - 18889683
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagatttta 38  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  18889720 caagaatgacatggcagaataataacccttagatttta 18889683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 161; Significance: 1e-85; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 4439 - 4666
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  4439 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccgaaaatcatggg 4538  T
Q  102 gtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    ||||||| |||||||||          |||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||| |||||||||||||    
T  4539 gtggtgggtgttatgtatctgttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttcttata 4638  T
Q  200 aaatcattcttgatatctagcattttcc 227  Q
    ||||||||||||||||||||||||||||    
T  4639 aaatcattcttgatatctagcattttcc 4666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 160; Significance: 5e-85; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 12884 - 13110
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  12884 caagaatgacatggcagaataatcatccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatgg 12983  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    ||||||||||||||||||          |||||||||||||||||||||||||||||||| ||| ||||||||| || ||||||||| ||||||||||||    
T  12984 ggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttcttat 13083  T
Q  199 aaaatcattcttgatatctagcatttt 225  Q
    |||||||||||||||||||||||||||    
T  13084 aaaatcattcttgatatctagcatttt 13110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 12919 - 12846
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| | |||||||| ||||| |||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  12919 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 12846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 158; Significance: 7e-84; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 11663 - 11891
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||    
T  11663 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcatgaaattaatgttaaccaataaaatctcagcctggccgaaaatcatgg 11762  T
Q  101 ggtggtggatgttatgta--nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttat 198  Q
    |||||||  |||||||||          |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||    
T  11763 ggtggtgagtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttat 11862  T
Q  199 aaaatcattcttgatatctagcattttcc 227  Q
    |||||||||||||||||||| ||||||||    
T  11863 aaaatcattcttgatatctaacattttcc 11891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 11698 - 11625
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| || || |||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  11698 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 11625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 152; Significance: 3e-80; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 41053 - 41280
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||    
T  41053 caagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcagcctggccggaaatcatgg 41152  T
Q  101 ggtggtggatgttatgta-nnnnnnnnatgaaagattaataaatgagactgaaatctaacggtgattattgtgccacgtcattcttgaatttttcttata 199  Q
    |||||||| |||||||||         |||||||||||||||||||||||||||||||| |||||||||||| |||  ||||||||| || |||||||||    
T  41153 ggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatatcattcttggatctttcttata 41252  T
Q  200 aaatcattcttgatatctagcattttcc 227  Q
    ||||||||||||||||||||||||||||    
T  41253 aaatcattcttgatatctagcattttcc 41280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 41088 - 41015
Alignment:
Q  151 aaatctaacggtgattattgtgccacgtcattcttg-aatttttcttataaaatcattcttgatatctagcatt 223  Q
    |||||||| |||||||||| ||||| |||||||||| ||||||| | |||||||| |||||||||| |||||||    
T  41088 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 41015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 3111 - 3222
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||     ||||| ||||||| ||    
T  3111 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatctc-----agccgaaaatcatagg 3205  T
Q  102 gtggtggatgttatgta 118  Q
    ||||||| |||||||||    
T  3206 gtggtgggtgttatgta 3222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 59; Significance: 9e-25; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 85468 - 85570
Alignment:
Q  1 caagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||| ||||| ||||||| |||||||  ||||||||||||||||| |||||||||||| ||||| | || |||||||||    
T  85468 caagaatgacatggcagaataatcatccttaaattttatgaagaaattatcctgaaattaatgttagccaataaaatcttagcctggtcgaaaatcatgg 85567  T
Q  101 ggt 103  Q
    |||    
T  85568 ggt 85570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 227
Target Start/End: Original strand, 85577 - 85642
Alignment:
Q  161 gtgattattgtgccacgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 227  Q
    ||||||||||||||| || ||| || ||| ||||  || ||||||||||||||||||||||||||||    
T  85577 gtgattattgtgccatgttattttttaatctttca-atcaaatcattcttgatatctagcattttcc 85642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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