View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15051_low_6 (Length: 290)
Name: NF15051_low_6
Description: NF15051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15051_low_6 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 64 - 149
Target Start/End: Complemental strand, 7998944 - 7998859
Alignment:
| Q |
64 |
atttttcgtatacccaataactagatatattctcaacaacaattctcggtaccacctttgatctttcctccttccttcaacatatt |
149 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||| | |||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
7998944 |
atttttcgtatacccaataactagatatattctcaaaaacaatttttggtaccacttttgatctttcctccttccttcaacatatt |
7998859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University