View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15052_low_7 (Length: 221)
Name: NF15052_low_7
Description: NF15052
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15052_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 95 - 143
Target Start/End: Complemental strand, 44953380 - 44953332
Alignment:
| Q |
95 |
taggaaaaagatacatgtacaccccaatgtacaccctccatgtggcatg |
143 |
Q |
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| T |
44953380 |
taggaaaaagatacatgtacaccccaatgtacaccctccatgtggcatg |
44953332 |
T |
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Target: chr2 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 108 - 147
Target Start/End: Complemental strand, 34332379 - 34332340
Alignment:
| Q |
108 |
catgtacaccccaatgtacaccctccatgtggcatggcta |
147 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
34332379 |
catgtacaccccaatgtacaccctccatgtggcatggcta |
34332340 |
T |
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