View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15053_low_16 (Length: 354)
Name: NF15053_low_16
Description: NF15053
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15053_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 7 - 337
Target Start/End: Original strand, 43090159 - 43090489
Alignment:
| Q |
7 |
ggattatgacacaagcctctcgaatctctctttgagaaatcttgagaaggaggatgaggaagagaaggattccatttggtacttgaagaatttgagtttg |
106 |
Q |
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| T |
43090159 |
ggattatgacacaagcctctcgaatctctctttgagaaatcttgagaaggaggatgaggaagagaaggattccatttggtacttgaagaatttgagtttg |
43090258 |
T |
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| Q |
107 |
aattatctctgtctttctttatcccaaacaaactcttgaaccaccttatggttctacccattggttgtagtgtttgaggacttggaagaatactagtgca |
206 |
Q |
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| T |
43090259 |
aattatctctgtctttctttatcccaaacaaactcttgaaccaccttatggttctacccattggttgtagtgtttgaggacttggaagaatactagtgca |
43090358 |
T |
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| Q |
207 |
agttgaagtgtgaaaattaacctacaaaaacacaaacaagtcacagtttattaagaccaaagaaaatgcctcgtgaaaaacaacattacatgacaaaacc |
306 |
Q |
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| T |
43090359 |
agttgaagtgtgaaaattaacctacaaaaacacaaacaagtcacagtttattaagaccaaagaaaatgcctcgtgaaaaactacattacatgacaaaaac |
43090458 |
T |
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| Q |
307 |
acacctctgtaacatgaggcgaagcatggaa |
337 |
Q |
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| T |
43090459 |
acacctctggaacatggggtgaagcatggaa |
43090489 |
T |
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