View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15053_low_25 (Length: 229)
Name: NF15053_low_25
Description: NF15053
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15053_low_25 |
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Alignment Details
Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 12 - 211
Target Start/End: Original strand, 39007651 - 39007850
Alignment:
| Q |
12 |
ataattcttgtcatgtttctgatggatattttttcttgatttcaggttccattatatgtggcaacaaagatggcatcaatcaggagatcttcattctttg |
111 |
Q |
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| T |
39007651 |
ataattcttgtcatgtttctgatggatattttttcttgatttcaggttccattatatgtggcaacaaagatggcatcaatcaggagatcttcattctttg |
39007750 |
T |
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| Q |
112 |
ttccatcaacagacggctatgcaaaagcaggtgtgaaatggataggatatgaacctcgttgcacaccatactggccacatacccttctatgggccgtggc |
211 |
Q |
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| T |
39007751 |
ttccatcaacagacggctatgcaaaagcaggtgtgaaatggataggatatgaacctcgttgcacaccatactggccacatacccttctatgggccgtggc |
39007850 |
T |
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