View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15055_high_15 (Length: 275)

Name: NF15055_high_15
Description: NF15055
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15055_high_15
NF15055_high_15
[»] chr4 (8 HSPs)
chr4 (18-267)||(15349253-15349502)
chr4 (18-267)||(14687181-14687436)
chr4 (18-260)||(42711184-42711432)
chr4 (19-155)||(45240267-45240404)
chr4 (19-155)||(11498023-11498159)
chr4 (19-142)||(18290701-18290824)
chr4 (19-156)||(10629417-10629551)
chr4 (36-145)||(11918125-11918233)
[»] chr7 (13 HSPs)
chr7 (18-267)||(540168-540417)
chr7 (18-267)||(16327176-16327431)
chr7 (18-267)||(9581452-9581707)
chr7 (18-267)||(9729304-9729559)
chr7 (18-267)||(4311278-4311532)
chr7 (18-267)||(8783498-8783753)
chr7 (103-267)||(14223144-14223314)
chr7 (19-156)||(23513736-23513873)
chr7 (19-156)||(13741088-13741225)
chr7 (19-146)||(4462117-4462244)
chr7 (19-152)||(5395811-5395944)
chr7 (19-156)||(12565670-12565807)
chr7 (19-159)||(10439748-10439888)
[»] chr1 (3 HSPs)
chr1 (18-267)||(27045423-27045672)
chr1 (52-150)||(22626469-22626567)
chr1 (19-155)||(21785853-21785986)
[»] chr6 (8 HSPs)
chr6 (18-267)||(22062920-22063169)
chr6 (84-267)||(19587034-19587223)
chr6 (19-156)||(18188979-18189116)
chr6 (19-172)||(23519161-23519314)
chr6 (19-145)||(17818194-17818320)
chr6 (18-156)||(18852688-18852822)
chr6 (18-63)||(29685293-29685338)
chr6 (18-66)||(19586983-19587031)
[»] chr3 (11 HSPs)
chr3 (18-267)||(6813418-6813667)
chr3 (18-259)||(12777913-12778160)
chr3 (18-267)||(15024253-15024508)
chr3 (19-155)||(20562017-20562153)
chr3 (19-155)||(20564325-20564461)
chr3 (19-155)||(20559709-20559845)
chr3 (19-156)||(13090217-13090351)
chr3 (19-156)||(9362367-9362501)
chr3 (19-156)||(13096380-13096514)
chr3 (19-138)||(20153465-20153581)
chr3 (18-64)||(3246922-3246968)
[»] scaffold0090 (1 HSPs)
scaffold0090 (18-267)||(29311-29566)
[»] chr8 (4 HSPs)
chr8 (18-267)||(20000851-20001103)
chr8 (19-155)||(20040479-20040615)
chr8 (19-159)||(21855186-21855323)
chr8 (19-155)||(17619412-17619545)
[»] scaffold0035 (1 HSPs)
scaffold0035 (18-267)||(51962-52217)
[»] chr5 (7 HSPs)
chr5 (18-267)||(23712116-23712371)
chr5 (19-150)||(20446255-20446386)
chr5 (19-156)||(21282320-21282458)
chr5 (19-142)||(18487473-18487596)
chr5 (19-145)||(23602050-23602173)
chr5 (19-156)||(24939200-24939334)
chr5 (19-139)||(24218516-24218633)
[»] scaffold0485 (1 HSPs)
scaffold0485 (18-267)||(11313-11569)
[»] chr2 (2 HSPs)
chr2 (19-156)||(24500997-24501134)
chr2 (19-164)||(25339516-25339661)
[»] scaffold0222 (1 HSPs)
scaffold0222 (19-142)||(18509-18632)
[»] scaffold0220 (1 HSPs)
scaffold0220 (37-156)||(11741-11860)
[»] scaffold0566 (1 HSPs)
scaffold0566 (19-155)||(1275-1411)
[»] scaffold0026 (1 HSPs)
scaffold0026 (52-156)||(17034-17138)
[»] scaffold0113 (1 HSPs)
scaffold0113 (19-156)||(38043-38177)
[»] scaffold0012 (2 HSPs)
scaffold0012 (19-145)||(12854-12977)
scaffold0012 (19-145)||(8745-8868)
[»] scaffold1184 (1 HSPs)
scaffold1184 (26-56)||(537-567)


Alignment Details
Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 15349253 - 15349502
Alignment:
Q  18 ttgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 117  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15349253 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 15349352  T
Q  118 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttga 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15349353 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttga 15349452  T
Q  218 tcccttgattcacactcaccccaaacatcttagcaataaaagtaatgatt 267  Q
    |||||||||||| ||||||||||||| |||||||||||||||| ||||||    
T  15349453 tcccttgattcatactcaccccaaacttcttagcaataaaagtgatgatt 15349502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 14687181 - 14687436
Alignment:
Q  18 ttgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 117  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  14687181 ttgtacctgtgggttagtaccaacataaagcaaattttccaccgcctccggattagtaatgtccgaattaggtagcataatcaaacaattagctctaata 14687280  T
Q  118 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 211  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||      |||||| |||||||||||||||||||| |||||||    
T  14687281 attctccatttatattggtaattgtgagtagggtcatgggttctaaggaatgacaaagtagtgagagtatataagtttagataatagttctcctctatcc 14687380  T
Q  212 tcttgatcccttgattcacactcaccccaaacatcttagcaataaaagtaatgatt 267  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  14687381 tcttgatcccttgattcacactcaccccaaacttcttagcaataaaagtgatgatt 14687436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 18 - 260
Target Start/End: Original strand, 42711184 - 42711432
Alignment:
Q  18 ttgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  42711184 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaata 42711283  T
Q  118 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 211  Q
    ||||||||||||||||||||||| |||||| ||||||||||| ||||||| ||||||||      |||||| |||||| ||||||| || ||||||||||    
T  42711284 attctccattcatattggtaattatgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcc 42711383  T
Q  212 tcttgatcccttgattcacactcaccccaaacatcttagcaataaaagt 260  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||||||||    
T  42711384 tcttgatcctttgattcacactcaccctaaacctcttagcaataaaagt 42711432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 45240267 - 45240404
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaa-ttagctctaatg 117  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||| | |||||| |||||||||||||| ||| |||||  || ||    
T  45240267 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatattcgaatttggtagaataatcaagcaatttagcgttattg 45240366  T
Q  118 attctccattcatattggtaattgtgagtagggtcatg 155  Q
    | |||||| ||||||||||||||||||| |||| ||||    
T  45240367 actctccactcatattggtaattgtgagaagggccatg 45240404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 11498023 - 11498159
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||| |  |||||||||||||||||||| |||||| |   | |||    
T  11498023 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatatttgaattaggtagaataatcaagcaattaacataattga 11498122  T
Q  119 ttctccattcatattggtaattgtgagtagggtcatg 155  Q
     |||||| |||||||||||||||| || |||||||||    
T  11498123 ctctccactcatattggtaattgttagaagggtcatg 11498159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 18290824 - 18290701
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    ||||||||||||||||| |||||||||| ||| ||||||| |||||||||||||||||| || ||||||||||||||||||||  |||| ||  || |||    
T  18290824 tgtacctgtgggttagtgccaacataaaccaagttttctatcacctccggattagtaatatctgaattaggtagaataatcaataaatttgcattattga 18290725  T
Q  119 ttctccattcatattggtaattgt 142  Q
     | |||| ||||||||||||||||    
T  18290724 atttccactcatattggtaattgt 18290701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 10629551 - 10629417
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    ||||||||||||||||| ||||||||||   | ||||||||| ||| |||||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  10629551 tgtacctgtgggttagtgccaacataaa---agttttctaccgccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 10629455  T
Q  119 ttctccattcatattggtaattgtgagtagggtcatgg 156  Q
     |||||| ||||||||| ||||||||| |||| |||||    
T  10629454 ctctccactcatattgggaattgtgagaagggccatgg 10629417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 36 - 145
Target Start/End: Original strand, 11918125 - 11918233
Alignment:
Q  36 accaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 135  Q
    ||||||||||| ||| ||||| ||||||| ||| ||||| ||||||| ||||||||||||||||||| ||||||| ||| ||| | |||| |||||||||    
T  11918125 accaacataaaacaatttttccaccaccttcgggttagttatgtccggattaggtagaataatcaaa-aattagccctattgactttccactcatattgg 11918223  T
Q  136 taattgtgag 145  Q
    ||||||||||    
T  11918224 taattgtgag 11918233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 540168 - 540417
Alignment:
Q  18 ttgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  540168 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctttaatg 540267  T
Q  118 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttga 217  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  540268 attctcctttcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttga 540367  T
Q  218 tcccttgattcacactcaccccaaacatcttagcaataaaagtaatgatt 267  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  540368 tcccttgattcacactcaccccaaacttcttagcaataaaagtgatgatt 540417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 16327176 - 16327431
Alignment:
Q  18 ttgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 117  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  16327176 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaatagtcaaacaattagctctaata 16327275  T
Q  118 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 211  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||      |||||| ||||||||||||||||| || |||||||    
T  16327276 attctccattcatattggtaattgtgagtagggtcatgggttataaggaaggacaaagtagtaagagtatataagtttagataatagttttcctctatcc 16327375  T
Q  212 tcttgatcccttgattcacactcaccccaaacatcttagcaataaaagtaatgatt 267  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||    
T  16327376 tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgatt 16327431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 9581707 - 9581452
Alignment:
Q  18 ttgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 117  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||     
T  9581707 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccagattagtaatgtccgaattaggtagaataatcaaacaattagttctaata 9581608  T
Q  118 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 211  Q
    || |||||||||||||| |||||||||||| ||||||||||| ||||||| ||||||||      |||||| |||||| ||||||| || ||||||||||    
T  9581607 atcctccattcatattgataattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcc 9581508  T
Q  212 tcttgatcccttgattcacactcaccccaaacatcttagcaataaaagtaatgatt 267  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||    
T  9581507 tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgatt 9581452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 9729559 - 9729304
Alignment:
Q  18 ttgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 117  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||     
T  9729559 ttgtacctgtggattagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagttctaata 9729460  T
Q  118 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 211  Q
    || |||||||||||||| |||||||||||| ||||||||||| ||||||| ||||||||      |||||| |||||| ||||||| || ||||||||||    
T  9729459 atcctccattcatattgataattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcc 9729360  T
Q  212 tcttgatcccttgattcacactcaccccaaacatcttagcaataaaagtaatgatt 267  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||    
T  9729359 tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgatt 9729304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 4311532 - 4311278
Alignment:
Q  18 ttgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 117  Q
    |||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  4311532 ttgtacatgtgggttagtaccaacgtaaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaata 4311433  T
Q  118 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 211  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||| || ||||||||      |||||| |||| ||||||||||||| | |||||||    
T  4311432 attctccattcatattggtaattgtgagtagggccatgggttctaagaaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcc 4311333  T
Q  212 tcttgatcccttgattcacactcaccccaaacatcttagcaataaaagtaatgatt 267  Q
    |||||||| |||||||||||||| |||||||| || ||| |||||| || ||||||    
T  4311332 tcttgatctcttgattcacactc-ccccaaacttcctagaaataaaggtgatgatt 4311278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 8783498 - 8783753
Alignment:
Q  18 ttgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 117  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||| ||||| || ||||     
T  8783498 ttgtacatgtgggttagtaccaacataaagcaaattttccaccacctccggattagttatgtccgaattagggagaataatcaaaaaattatctgtaata 8783597  T
Q  118 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 211  Q
    ||||||| |||||||| |||||||||||||||| |||||||| ||||||| | ||||||      |||||| |||| ||||||||||||| | |||||||    
T  8783598 attctcctttcatatttgtaattgtgagtagggccatgggttgtaaggaagggcaaagtagtgagagtatataagtctagataatagttcccctctatcc 8783697  T
Q  212 tcttgatcccttgattcacactcaccccaaacatcttagcaataaaagtaatgatt 267  Q
     |||||||| |||||||||||||||||||||| || |||||||||| || ||||||    
T  8783698 ccttgatccattgattcacactcaccccaaacttcctagcaataaaggtgatgatt 8783753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 103 - 267
Target Start/End: Original strand, 14223144 - 14223314
Alignment:
Q  103 caattagctctaatgattctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataat 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||      |||||| |||||||||||||    
T  14223144 caattagctctaatgattctccattcatattggtaattgtgagtagggtcatgggctttaaggaatgacaaagtagtgagagtatataagtttagataat 14223243  T
Q  197 agttctcatctatcctcttgatcccttgattcacactcaccccaaacatcttagcaataaaagtaatgatt 267  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  14223244 agttctcctctttcctcttgatcccttgattcacactcaccccaaacttcttagcaataaaagtgatgatt 14223314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 23513873 - 23513736
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    ||||||||||||||||| ||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||  || |||    
T  23513873 tgtacctgtgggttagtgccaacataaacaaagttttctaccacctccggattagtaatgtccgaattaggtagaataatcaagtaattagcattattga 23513774  T
Q  119 ttctccattcatattggtaattgtgagtagggtcatgg 156  Q
     |||||| |||||| |||||||||||| |||| |||||    
T  23513773 ctctccactcatataggtaattgtgagaagggccatgg 23513736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 13741225 - 13741088
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    ||||||||||| ||||| ||||||||||   | |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |  || |||    
T  13741225 tgtacctgtggattagtgccaacataaacatagttttctaccacctccgaattagtaatgtccgaattaggtagaataatcaagcaattatcattattga 13741126  T
Q  119 ttctccattcatattggtaattgtgagtagggtcatgg 156  Q
     |||||| ||||||||||||||||||| |||| |||||    
T  13741125 ctctccactcatattggtaattgtgagaagggccatgg 13741088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 4462117 - 4462244
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    |||||| ||||||||||||||| ||||||||||||||| ||||||| ||| ||||| |||  || ||||||||||||||||||||||| |||||||||||    
T  4462117 tgtaccagtgggttagtaccaatataaagcaaattttccaccaccttcgggttagttatgaacggattaggtagaataatcaaacaatgagctctaatga 4462216  T
Q  119 ttctccattcatattggtaattgtgagt 146  Q
    || || | |||||||||| |||||||||    
T  4462217 ttttctaatcatattggtcattgtgagt 4462244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 5395944 - 5395811
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  5395944 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 5395845  T
Q  119 ttctccattcatattggtaattgtgagtagggtc 152  Q
      ||||| |||| ||||||||||| || ||||||    
T  5395844 cgctccactcattttggtaattgttagaagggtc 5395811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 12565807 - 12565670
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    |||||| ||||||||||||||||||||| ||| |||||||||||||||| ||||||||| || |||||||||  |||||||||  |||||||  || |||    
T  12565807 tgtaccggtgggttagtaccaacataaaccaagttttctaccacctccgaattagtaatatctgaattaggttaaataatcaagaaattagcattattga 12565708  T
Q  119 ttctccattcatattggtaattgtgagtagggtcatgg 156  Q
     |||||| |||||||||||||||| || |||| |||||    
T  12565707 ctctccactcatattggtaattgttagaagggccatgg 12565670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 10439748 - 10439888
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||| | | |||||||| || ||||||||||||||||||||  ||||| |  || |||    
T  10439748 tgtacctgtgggttagtgccaacataaaccaagttttctaccaccttcagcttagtaatatctgaattaggtagaataatcaagaaattatcattattga 10439847  T
Q  119 ttctccattcatattggtaattgtgagtagggtcatgggtt 159  Q
     |||||| ||||||||||||||||||| ||||  |||||||    
T  10439848 ctctccactcatattggtaattgtgagaagggctatgggtt 10439888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 230; Significance: 1e-127; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 27045672 - 27045423
Alignment:
Q  18 ttgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 117  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27045672 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 27045573  T
Q  118 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttga 217  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27045572 attctccatgcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttga 27045473  T
Q  218 tcccttgattcacactcaccccaaacatcttagcaataaaagtaatgatt 267  Q
    |||||||||||| ||||||||||||| |||||||||||||||| ||||||    
T  27045472 tcccttgattcatactcaccccaaacttcttagcaataaaagtgatgatt 27045423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 52 - 150
Target Start/End: Original strand, 22626469 - 22626567
Alignment:
Q  52 ttttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattggtaattgtgagtaggg 150  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||  || ||| |||||| ||||||||||||||||||| ||||    
T  22626469 ttttctaccaccaccggattagtaatatccgaattaggtagaataatcaagcaattagcattattgactctccactcatattggtaattgtgagaaggg 22626567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 21785853 - 21785986
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    ||||||||||||||||| ||||||||||   | ||||||||||||| |||||||||||| || ||||||||||||| ||||||  |||||||  || |||    
T  21785853 tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaaaaatcaagaaattagcattattga 21785949  T
Q  119 ttctccattcatattggtaattgtgagtagggtcatg 155  Q
     |||||| |||| |||||| |||| || |||| ||||    
T  21785950 ctctccactcatgttggtacttgttagaagggccatg 21785986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 218; Significance: 1e-120; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 22062920 - 22063169
Alignment:
Q  18 ttgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 117  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22062920 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 22063019  T
Q  118 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttga 217  Q
    ||||||||| ||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22063020 attctccatgcatgttggtaattgtgagtagagtcatggtttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttga 22063119  T
Q  218 tcccttgattcacactcaccccaaacatcttagcaataaaagtaatgatt 267  Q
    |||||||||||| ||||||||||||| |||||||||||||||| ||||||    
T  22063120 tcccttgattcatactcaccccaaacttcttagcaataaaagtgatgatt 22063169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 84 - 267
Target Start/End: Original strand, 19587034 - 19587223
Alignment:
Q  84 attaggtagaataatcaaacaattagctctaatgattctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------a 177  Q
    ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||| ||||||  |||||||| ||||||| ||||||||      |    
T  19587034 attaggtagaataatcaaacaattagctctaataattctccgtttatattggtaattgtaagtaggtccatgggttctaaggaaggacaaagtagtgaga 19587133  T
Q  178 gtataaaagtttagataatagttctcatctatcctcttgatcccttgattcacactcaccccaaacatcttagcaataaaagtaatgatt 267  Q
    ||||| |||| |||||||||||||   ||||||||||||||||||||||||| ||||||||||||| || |||||||||| || ||||||    
T  19587134 gtatataagtgtagataatagttcctctctatcctcttgatcccttgattcagactcaccccaaacttcctagcaataaaggtgatgatt 19587223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 156
Target Start/End: Original strand, 18188979 - 18189116
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||  || |||    
T  18188979 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtattatccgaattaggtagaataatcaagcaattagcattattga 18189078  T
Q  119 ttctccattcatattggtaattgtgagtagggtcatgg 156  Q
     |||||| ||||||||||||||||||| ||||||||||    
T  18189079 ctctccactcatattggtaattgtgagaagggtcatgg 18189116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 172
Target Start/End: Original strand, 23519161 - 23519314
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    |||||| |||||||||| |||||||||||||||||||| |||| |||||||||||| |||||| ||| |||||||||||||||||||||||| ||| | |    
T  23519161 tgtacccgtgggttagttccaacataaagcaaattttccaccatctccggattagttatgtccaaataaggtagaataatcaaacaattagccctattta 23519260  T
Q  119 ttctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgaca 172  Q
     | |||   |||||||||| ||||||| ||||||||||||| ||||||| ||||    
T  23519261 ctttccgcacatattggtagttgtgagaagggtcatgggttataaggaaagaca 23519314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 145
Target Start/End: Complemental strand, 17818320 - 17818194
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||| |||||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  17818320 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctacggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 17818221  T
Q  119 ttctccattcatattggtaattgtgag 145  Q
     |||||| |||||||||||||||||||    
T  17818220 ctctccactcatattggtaattgtgag 17818194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 18852822 - 18852688
Alignment:
Q  18 ttgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 117  Q
    |||||||||||||||||| ||||||||||   |||||||||||| ||||||||||||||| || |||||||||||||||||| || || || |  || |     
T  18852822 ttgtacctgtgggttagtgccaacataaa---aattttctaccatctccggattagtaatatctgaattaggtagaataatc-aagaaataacattattt 18852727  T
Q  118 attctccattcatattggtaattgtgagtagggtcatgg 156  Q
    | |||||| ||||||||||||||||||| |||| |||||    
T  18852726 actctccactcatattggtaattgtgagaagggccatgg 18852688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 29685338 - 29685293
Alignment:
Q  18 ttgtacctgtgggttagtaccaacataaagcaaattttctaccacc 63  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||    
T  29685338 ttgtacctgtgggttagtactaacataaagcaaattttccaccacc 29685293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 19586983 - 19587031
Alignment:
Q  18 ttgtacctgtgggttagtaccaacataaagcaaattttctaccacctcc 66  Q
    |||||||||||||||| |||||||||||| ||||||||| |||||||||    
T  19586983 ttgtacctgtgggttaataccaacataaatcaaattttccaccacctcc 19587031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 218; Significance: 1e-120; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 6813667 - 6813418
Alignment:
Q  18 ttgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 117  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6813667 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 6813568  T
Q  118 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttga 217  Q
    ||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6813567 attctccatgcatattggtaattgtgagtagagtcatggtttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttga 6813468  T
Q  218 tcccttgattcacactcaccccaaacatcttagcaataaaagtaatgatt 267  Q
    |||||||||||| ||||||| ||||| |||||||||||||||| ||||||    
T  6813467 tcccttgattcatactcacctcaaacttcttagcaataaaagtgatgatt 6813418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 18 - 259
Target Start/End: Original strand, 12777913 - 12778160
Alignment:
Q  18 ttgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||     
T  12777913 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccgaattagtaatgtccgaattaggtagaataatcaaacaattagttctaata 12778012  T
Q  118 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 211  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||      |||| | |||||| ||||||| || || |||||||    
T  12778013 attctccattcatattgataattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtaaataagtttggataataattttcctctatcc 12778112  T
Q  212 tcttgatcccttgattcacactcaccccaaacatcttagcaataaaag 259  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||    
T  12778113 tcttgatcccttgattcacactcaccctaaacctcttagcaataaaag 12778160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 15024508 - 15024253
Alignment:
Q  18 ttgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 117  Q
    |||||| ||||| ||||||||||||||| |||||||||| ||||||||||||||||| ||||| | ||||||||||||||| ||||||||||||||| |     
T  15024508 ttgtacatgtggattagtaccaacataatgcaaattttccaccacctccggattagttatgtctggattaggtagaataataaaacaattagctctatta 15024409  T
Q  118 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 211  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||      |||||| |||| ||||||||||| | | |||||||    
T  15024408 attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagtacccctctatcc 15024309  T
Q  212 tcttgatcccttgattcacactcaccccaaacatcttagcaataaaagtaatgatt 267  Q
    |||||||||||||||||||||||||||||||| |  ||||||||||||| ||||||    
T  15024308 tcttgatcccttgattcacactcaccccaaactttctagcaataaaagtgatgatt 15024253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 20562153 - 20562017
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    ||||||||||||||||| |||||| ||| | | |||||||||||||||| ||||||||| || ||||||||||||||||||||  ||||||   || |||    
T  20562153 tgtacctgtgggttagtgccaacacaaacctagttttctaccacctccgaattagtaatatctgaattaggtagaataatcaagaaattagtagtattga 20562054  T
Q  119 ttctccattcatattggtaattgtgagtagggtcatg 155  Q
     |||||| ||||||||||||||||||| |||| ||||    
T  20562053 ctctccactcatattggtaattgtgagaagggccatg 20562017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 20564461 - 20564325
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    ||||||||||||||||| |||||| ||| | | |||||||||||||||| ||||||||| || ||||||||||||||||||||  ||||||   || |||    
T  20564461 tgtacctgtgggttagtgccaacacaaacctagttttctaccacctccgaattagtaatatctgaattaggtagaataatcaagaaattagtagtattga 20564362  T
Q  119 ttctccattcatattggtaattgtgagtagggtcatg 155  Q
     |||||| ||||||||||||||||||| |||| ||||    
T  20564361 ctctccactcatattggtaattgtgagaagggccatg 20564325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 20559845 - 20559709
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    |||| |||||||||||| |||||| ||| | | |||||||||||||||| ||||||||| || ||||||||||||||||||||  ||||||   || |||    
T  20559845 tgtatctgtgggttagtgccaacacaaacctagttttctaccacctccgaattagtaatatctgaattaggtagaataatcaagaaattagtagtattga 20559746  T
Q  119 ttctccattcatattggtaattgtgagtagggtcatg 155  Q
     |||||| ||||||||||||||||||| |||| ||||    
T  20559745 ctctccactcatattggtaattgtgagaagggccatg 20559709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 156
Target Start/End: Original strand, 13090217 - 13090351
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    ||||||||||||||||| ||||||||||   | ||||||||||||| |||||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  13090217 tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 13090313  T
Q  119 ttctccattcatattggtaattgtgagtagggtcatgg 156  Q
     || ||| ||||||||| ||||||||| |||| |||||    
T  13090314 ctcaccactcatattgggaattgtgagaagggccatgg 13090351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 156
Target Start/End: Original strand, 9362367 - 9362501
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    ||||||||||||||||| ||||||||||   | ||||||||||||| |||||||||||| |  ||||||||||||||||||||  |||||||  || |||    
T  9362367 tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatttgaattaggtagaataatcaagaaattagcattattga 9362463  T
Q  119 ttctccattcatattggtaattgtgagtagggtcatgg 156  Q
     |||||| |||||||||  |||||||| |||| |||||    
T  9362464 ctctccactcatattggggattgtgagaagggccatgg 9362501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 13096514 - 13096380
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    |||||||||||||||||  |||||||||   | ||||||||||||| |||||||||||| || ||||||||||||||||||||  ||||||   || |||    
T  13096514 tgtacctgtgggttagtgtcaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagaattattga 13096418  T
Q  119 ttctccattcatattggtaattgtgagtagggtcatgg 156  Q
     |||||| |||| |||| ||||||||| |||| |||||    
T  13096417 ctctccactcatgttgggaattgtgagaagggccatgg 13096380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 20153581 - 20153465
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    ||||||||| ||||||| ||||||||||  || ||||||||||||||| |||||| ||| || ||   |||||||||||||||  |||||||   | |||    
T  20153581 tgtacctgtaggttagtgccaacataaacaaagttttctaccacctccagattaggaatatctga---aggtagaataatcaagaaattagcagcattga 20153485  T
Q  119 ttctccattcatattggtaa 138  Q
     |||||| ||||||||||||    
T  20153484 ctctccactcatattggtaa 20153465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 3246922 - 3246968
Alignment:
Q  18 ttgtacctgtgggttagtaccaacataaagcaaattttctaccacct 64  Q
    |||||||||||||||||||| || ||||| ||||||||| |||||||    
T  3246922 ttgtacctgtgggttagtacaaaaataaaacaaattttccaccacct 3246968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 29566 - 29311
Alignment:
Q  18 ttgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29566 ttgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcatacaattagctctaatg 29467  T
Q  118 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||||||||||||||||    
T  29466 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtgagagtataaaagtttagataatagttctcatctatcc 29367  T
Q  212 tcttgatcccttgattcacactcaccccaaacatcttagcaataaaagtaatgatt 267  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||    
T  29366 tcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgatt 29311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 207; Significance: 1e-113; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 20001103 - 20000851
Alignment:
Q  18 ttgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 117  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20001103 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccagattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 20001004  T
Q  118 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||||||||||||||||    
T  20001003 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtgagagtataaaagtttagataatagttctcatctatcc 20000904  T
Q  212 tcttgatcccttgattcacactcaccccaaacatcttagcaataaaagtaatgatt 267  Q
    |||||||||||||||||||||||||||||||   ||||||||||||||| ||||||    
T  20000903 tcttgatcccttgattcacactcaccccaaa---cttagcaataaaagtgatgatt 20000851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 20040479 - 20040615
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    ||||||||||||||||| |||||||||| | | |||||||||||||| ||||||||||| || ||||||||||||||||||||  ||||||   || |||    
T  20040479 tgtacctgtgggttagtgccaacataaacctagttttctaccacctctggattagtaatatctgaattaggtagaataatcaagaaattagtagtattga 20040578  T
Q  119 ttctccattcatattggtaattgtgagtagggtcatg 155  Q
     |||||| ||||||||||||||||||| |||| ||||    
T  20040579 ctctccactcatattggtaattgtgagaagggccatg 20040615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 21855186 - 21855323
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    ||||||||| ||||||| ||||||||||   | ||||||||||||| |||||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  21855186 tgtacctgtaggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 21855282  T
Q  119 ttctccattcatattggtaattgtgagtagggtcatgggtt 159  Q
     |||||| ||||||||||||||||||| ||||| |||||||    
T  21855283 ctctccactcatattggtaattgtgagaagggttatgggtt 21855323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 17619545 - 17619412
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    ||||||||||||||||| ||||||||||   | ||||||||||||| |||||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  17619545 tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 17619449  T
Q  119 ttctccattcatattggtaattgtgagtagggtcatg 155  Q
     |||||| ||||||||| ||||||||| |||| ||||    
T  17619448 ctctccactcatattggaaattgtgagaagggccatg 17619412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 51962 - 52217
Alignment:
Q  18 ttgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||     
T  51962 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaata 52061  T
Q  118 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 211  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||      |||||| ||||||||||||||||| || |||||||    
T  52062 attctccattcatattggtaattgtgagtagggtcatgggttataaggaaggacaaagtagtaagagtatataagtttagataatagttttcctctatcc 52161  T
Q  212 tcttgatcccttgattcacactcaccccaaacatcttagcaataaaagtaatgatt 267  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||    
T  52162 tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgatt 52217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 165; Significance: 3e-88; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 23712116 - 23712371
Alignment:
Q  18 ttgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 117  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||     
T  23712116 ttgtacctgtgggttaggaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaaaaattagttctaata 23712215  T
Q  118 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 211  Q
    || ||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||      |||||| |||||| ||||||| || ||||||||||    
T  23712216 atcctccattcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcc 23712315  T
Q  212 tcttgatcccttgattcacactcaccccaaacatcttagcaataaaagtaatgatt 267  Q
    ||||||||||||||||||||||||||| |||| ||||||||| |||||| ||||||    
T  23712316 tcttgatcccttgattcacactcaccctaaacctcttagcaacaaaagtgatgatt 23712371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 150
Target Start/End: Original strand, 20446255 - 20446386
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||| |||||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  20446255 tgtacctgtgggttagtgccaacataaaccaagttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 20446354  T
Q  119 ttctccattcatattggtaattgtgagtaggg 150  Q
     |||||| ||||||||||||||||||| ||||    
T  20446355 ctctccactcatattggtaattgtgagaaggg 20446386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 156
Target Start/End: Original strand, 21282320 - 21282458
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaa-ttagctctaatg 117  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||| | |||||| |||||||||||||| ||| |||||  || ||    
T  21282320 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatattcgaatttggtagaataatcaagcaatttagcgttattg 21282419  T
Q  118 attctccattcatattggtaattgtgagtagggtcatgg 156  Q
    | |||||| ||||||||||||||||||| ||||| ||||    
T  21282420 actctccactcatattggtaattgtgagaagggttatgg 21282458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 18487473 - 18487596
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||| |||||| |||| || ||||||||||||||||||||  |||||||  || |||    
T  18487473 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctcaggattaataatatctgaattaggtagaataatcaagaaattagcattattga 18487572  T
Q  119 ttctccattcatattggtaattgt 142  Q
     |||||| ||||||||||||||||    
T  18487573 ctctccactcatattggtaattgt 18487596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 145
Target Start/End: Original strand, 23602050 - 23602173
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    ||||||||||||||||| ||||||||||   | ||||||||||||| |||||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  23602050 tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 23602146  T
Q  119 ttctccattcatattggtaattgtgag 145  Q
     || ||| ||||||||| |||||||||    
T  23602147 ctcgccactcatattgggaattgtgag 23602173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 24939334 - 24939200
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    ||||||||||||||||| ||||||||||   | ||||||||||||| || ||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  24939334 tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcgaattagtaatatctgaattaggtagaataatcaagaaattagcattattga 24939238  T
Q  119 ttctccattcatattggtaattgtgagtagggtcatgg 156  Q
     || ||| ||||||||| ||||||||| |||| |||||    
T  24939237 ctcgccactcatattgggaattgtgagaagggccatgg 24939200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 24218633 - 24218516
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    ||||| ||||||||||| |||||||||    | |||||||||| ||||||||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  24218633 tgtacatgtgggttagtgccaacataat---agttttctaccatctccggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 24218537  T
Q  119 ttctccattcatattggtaat 139  Q
     |||||| |||||||||||||    
T  24218536 ctctccactcatattggtaat 24218516  T

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Target: scaffold0485 (Bit Score: 154; Significance: 9e-82; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 11313 - 11569
Alignment:
Q  18 ttgtacctgtgggttagtaccaacataaagcaaatttt-ctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaat 116  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  11313 ttgtacctgtgggttagtaccaacataaagcaaatttttccaccacctccagattagttatgtccggattaggtagaataatcaaacaattagctctaat 11412  T
Q  117 gattctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtag------tataaaagtttagataatagttctcatctatc 210  Q
     |||||||| ||||||||||||||||||||| ||||||||||| ||||||| ||||||||||      |||| |||| ||||||||||||| | ||||||    
T  11413 aattctccactcatattggtaattgtgagtatggtcatgggttctaaggaaggacaaagtagtgagattatataagtctagataatagttcccctctatc 11512  T
Q  211 ctcttgatcccttgattcacactcaccccaaacatcttagcaataaaagtaatgatt 267  Q
    ||||||||||||||||||||||||||||||||| |  |||||||||| || ||||||    
T  11513 ctcttgatcccttgattcacactcaccccaaactttctagcaataaaggtgatgatt 11569  T

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Target: chr2 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 24501134 - 24500997
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  || |||    
T  24501134 tgtacctgtgggttagtgccaacataaatcaagttttctaccacctccggattagtaatgtccgaattaggtagaataatcaagcaattagcattattga 24501035  T
Q  119 ttctccattcatattggtaattgtgagtagggtcatgg 156  Q
     |||||| | ||||||||||||||||| |||| |||||    
T  24501034 ctctccactaatattggtaattgtgagaagggccatgg 24500997  T

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Target: chr2; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 164
Target Start/End: Original strand, 25339516 - 25339661
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    ||||| |||| |||||| ||||||||||| |||||||| ||||||||| ||||||| ||||||| ||||||||||||||||||||||||||| ||| |||    
T  25339516 tgtacatgtgagttagtgccaacataaagaaaattttccaccacctccagattagttatgtccggattaggtagaataatcaaacaattagccctattga 25339615  T
Q  119 ttctccattcatattggtaattgtgagtagggtcatgggttttaag 164  Q
       |||| |||||||||||||||||||| ||| |||| ||| ||||    
T  25339616 ccttccactcatattggtaattgtgagttgggccatgagttctaag 25339661  T

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Target: scaffold0222 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 18632 - 18509
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  18632 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 18533  T
Q  119 ttctccattcatattggtaattgt 142  Q
     |||||| ||||||||||||||||    
T  18532 ctctccactcatattggtaattgt 18509  T

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Target: scaffold0220 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 37 - 156
Target Start/End: Original strand, 11741 - 11860
Alignment:
Q  37 ccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattggt 136  Q
    |||||||||| ||| ||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||  || ||| |||||| ||||||||||    
T  11741 ccaacataaaccaagttttctaccacctccagattagtaatatccgaattaggtagaataatcaagcaattagcattattgactctccactcatattggt 11840  T
Q  137 aattgtgagtagggtcatgg 156  Q
    ||||||||| ||||||||||    
T  11841 aattgtgagaagggtcatgg 11860  T

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Target: scaffold0566 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0566
Description:

Target: scaffold0566; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 1411 - 1275
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||| |||||||||| || ||||||||||||||||||||  |||||||   | |||    
T  1411 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccagattagtaatatctgaattaggtagaataatcaagaaattagcataattga 1312  T
Q  119 ttctccattcatattggtaattgtgagtagggtcatg 155  Q
     |||||| |||||||||||||||| || |||||||||    
T  1311 ctctccactcatattggtaattgttagaagggtcatg 1275  T

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Target: scaffold0026 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 52 - 156
Target Start/End: Complemental strand, 17138 - 17034
Alignment:
Q  52 ttttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattggtaattgtgagtagggt 151  Q
    |||||||||||||| | ||||||||| ||||||||||||||||||||||| ||||||||  || ||| |||||| ||||||||||||||||||| |||||    
T  17138 ttttctaccacctctgtattagtaatatccgaattaggtagaataatcaagcaattagcattattgactctccactcatattggtaattgtgagaagggt 17039  T
Q  152 catgg 156  Q
    |||||    
T  17038 catgg 17034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 156
Target Start/End: Original strand, 38043 - 38177
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    ||||||||||||||||| ||||||||||   | |||||||||||||  | ||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  38043 tgtacctgtgggttagtgccaacataaa---agttttctaccaccttagaattagtaatatctgaattaggtagaataatcaagaaattagcattattga 38139  T
Q  119 ttctccattcatattggtaattgtgagtagggtcatgg 156  Q
     || ||| ||||||||| ||||||||| |||| |||||    
T  38140 ctcgccactcatattggaaattgtgagaagggccatgg 38177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 145
Target Start/End: Original strand, 12854 - 12977
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    ||||||||||||||||| ||||||||||   | ||||||||||||||| |||||||||| ||  | |||||||||||||| |   |||||||  || |||    
T  12854 tgtacctgtgggttagtgccaacataaa---agttttctaccacctccagattagtaatatctaatttaggtagaataataaggaaattagcattattga 12950  T
Q  119 ttctccattcatattggtaattgtgag 145  Q
     |||| | |||||||||||| ||||||    
T  12951 ctctctactcatattggtaactgtgag 12977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 145
Target Start/End: Original strand, 8745 - 8868
Alignment:
Q  19 tgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 118  Q
    ||||| ||||||||||| ||||||||||   | ||||||||||||||| |||||||||| ||  | |||||||||||||| |   |||||||  || |||    
T  8745 tgtacatgtgggttagtgccaacataaa---agttttctaccacctccagattagtaatatctaatttaggtagaataataaggaaattagcattattga 8841  T
Q  119 ttctccattcatattggtaattgtgag 145  Q
     |||| | |||||||||||| ||||||    
T  8842 ctctctactcatattggtaactgtgag 8868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1184 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1184
Description:

Target: scaffold1184; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 56
Target Start/End: Original strand, 537 - 567
Alignment:
Q  26 gtgggttagtaccaacataaagcaaattttc 56  Q
    |||||||||||||||||||||||||||||||    
T  537 gtgggttagtaccaacataaagcaaattttc 567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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