View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15056_high_7 (Length: 338)

Name: NF15056_high_7
Description: NF15056
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15056_high_7
NF15056_high_7
[»] chr3 (72 HSPs)
chr3 (2-245)||(45710868-45711110)
chr3 (2-142)||(30190617-30190757)
chr3 (1-149)||(24569051-24569198)
chr3 (1-136)||(52290910-52291045)
chr3 (3-136)||(37695628-37695762)
chr3 (2-136)||(10366605-10366746)
chr3 (6-129)||(37311972-37312095)
chr3 (1-136)||(53560234-53560369)
chr3 (2-136)||(8679017-8679151)
chr3 (2-136)||(11905840-11905974)
chr3 (2-132)||(29023933-29024062)
chr3 (2-139)||(19823029-19823166)
chr3 (4-121)||(43253841-43253958)
chr3 (3-136)||(36476603-36476736)
chr3 (2-129)||(36460386-36460513)
chr3 (2-136)||(37497510-37497644)
chr3 (1-121)||(27471352-27471472)
chr3 (1-136)||(51837922-51838057)
chr3 (3-136)||(5322902-5323033)
chr3 (2-136)||(44301580-44301714)
chr3 (3-117)||(54726504-54726618)
chr3 (2-136)||(17652770-17652900)
chr3 (2-135)||(38795362-38795495)
chr3 (17-136)||(49830162-49830282)
chr3 (2-129)||(23004353-23004479)
chr3 (1-136)||(37772927-37773062)
chr3 (2-119)||(28690762-28690879)
chr3 (3-136)||(34957522-34957655)
chr3 (6-130)||(12736541-12736665)
chr3 (2-97)||(3901151-3901246)
chr3 (1-91)||(54477467-54477557)
chr3 (3-136)||(19609318-19609451)
chr3 (3-128)||(19611928-19612052)
chr3 (2-130)||(14194574-14194701)
chr3 (2-97)||(30682068-30682163)
chr3 (2-129)||(3313272-3313395)
chr3 (1-78)||(39043775-39043855)
chr3 (6-91)||(34750518-34750603)
chr3 (6-138)||(43719289-43719420)
chr3 (1-97)||(48541002-48541098)
chr3 (2-129)||(1778661-1778787)
chr3 (2-129)||(11632099-11632225)
chr3 (2-94)||(12904882-12904975)
chr3 (4-72)||(43870836-43870904)
chr3 (17-100)||(50035216-50035299)
chr3 (19-101)||(30711108-30711190)
chr3 (6-84)||(24245109-24245186)
chr3 (2-44)||(41038448-41038490)
chr3 (7-100)||(10973559-10973652)
chr3 (1-42)||(37804802-37804843)
chr3 (11-104)||(39931656-39931749)
chr3 (25-130)||(45811697-45811801)
chr3 (29-129)||(31158492-31158591)
chr3 (57-129)||(33491053-33491125)
chr3 (2-50)||(33491408-33491456)
chr3 (53-129)||(51064788-51064864)
chr3 (25-97)||(52206849-52206921)
chr3 (2-101)||(36462944-36463043)
chr3 (3-73)||(38705194-38705266)
chr3 (3-126)||(26467128-26467252)
chr3 (11-97)||(29595729-29595815)
chr3 (16-73)||(42278697-42278754)
chr3 (17-124)||(49447769-49447873)
chr3 (37-97)||(44684988-44685048)
chr3 (26-100)||(25090053-25090127)
chr3 (2-44)||(40194521-40194563)
chr3 (19-76)||(48893775-48893832)
chr3 (14-42)||(37804765-37804793)
chr3 (3-47)||(37804854-37804898)
chr3 (6-73)||(38137469-38137539)
chr3 (3-135)||(38512044-38512176)
chr3 (26-102)||(47825101-47825177)
[»] chr7 (78 HSPs)
chr7 (2-135)||(27921013-27921146)
chr7 (16-136)||(42935700-42935820)
chr7 (1-136)||(26974050-26974188)
chr7 (2-129)||(41506043-41506169)
chr7 (2-136)||(34947525-34947659)
chr7 (3-136)||(83411-83544)
chr7 (2-136)||(9786013-9786147)
chr7 (2-155)||(24516241-24516393)
chr7 (2-136)||(28202279-28202413)
chr7 (18-135)||(40076356-40076473)
chr7 (2-122)||(28103758-28103878)
chr7 (2-137)||(759060-759195)
chr7 (2-129)||(7463238-7463365)
chr7 (1-124)||(32346034-32346157)
chr7 (2-136)||(16560540-16560674)
chr7 (2-136)||(16604988-16605122)
chr7 (2-124)||(43873948-43874070)
chr7 (3-120)||(30865993-30866110)
chr7 (2-134)||(13961984-13962116)
chr7 (3-136)||(21390321-21390456)
chr7 (40-136)||(44180268-44180364)
chr7 (2-129)||(11373405-11373532)
chr7 (2-129)||(22738726-22738853)
chr7 (2-121)||(38391773-38391892)
chr7 (1-119)||(33819238-33819356)
chr7 (2-100)||(34100553-34100651)
chr7 (2-122)||(5524405-5524525)
chr7 (2-137)||(16904404-16904539)
chr7 (2-124)||(21759966-21760088)
chr7 (16-136)||(2850851-2850971)
chr7 (4-130)||(2459498-2459622)
chr7 (2-129)||(46478270-46478397)
chr7 (2-124)||(19271715-19271837)
chr7 (19-121)||(29835399-29835501)
chr7 (2-136)||(44424169-44424294)
chr7 (2-100)||(3178210-3178308)
chr7 (18-100)||(7457427-7457509)
chr7 (1-118)||(49101687-49101807)
chr7 (2-99)||(17828358-17828455)
chr7 (2-129)||(21350605-21350729)
chr7 (2-130)||(32018688-32018816)
chr7 (3-86)||(23670512-23670595)
chr7 (3-129)||(8592417-8592543)
chr7 (2-96)||(37245715-37245808)
chr7 (21-136)||(46211472-46211590)
chr7 (6-97)||(21937796-21937887)
chr7 (2-91)||(32018930-32019020)
chr7 (7-104)||(7930083-7930180)
chr7 (11-135)||(31930468-31930592)
chr7 (23-135)||(39452390-39452501)
chr7 (2-126)||(48608891-48609011)
chr7 (21-91)||(47045469-47045538)
chr7 (2-67)||(6494973-6495038)
chr7 (83-136)||(36790852-36790905)
chr7 (6-73)||(17610571-17610638)
chr7 (17-68)||(39005461-39005512)
chr7 (2-56)||(25571444-25571498)
chr7 (3-85)||(35333069-35333151)
chr7 (27-100)||(27556975-27557048)
chr7 (17-124)||(12631345-12631452)
chr7 (7-66)||(24167021-24167080)
chr7 (8-63)||(42796039-42796094)
chr7 (19-89)||(15464720-15464790)
chr7 (16-58)||(27903314-27903356)
chr7 (26-94)||(31327482-31327550)
chr7 (4-67)||(10042308-10042371)
chr7 (26-92)||(25531004-25531070)
chr7 (59-92)||(7004441-7004474)
chr7 (59-92)||(7019799-7019832)
chr7 (59-92)||(7050312-7050345)
chr7 (7-104)||(7348154-7348251)
chr7 (40-101)||(27167896-27167957)
chr7 (7-104)||(29121533-29121630)
chr7 (19-92)||(47254958-47255031)
chr7 (2-50)||(17610927-17610975)
chr7 (21-97)||(30107160-30107236)
chr7 (4-96)||(30546365-30546457)
chr7 (4-44)||(38032765-38032805)
[»] chr1 (86 HSPs)
chr1 (2-136)||(49223952-49224086)
chr1 (2-136)||(39864129-39864263)
chr1 (2-136)||(15699140-15699275)
chr1 (2-136)||(20209806-20209940)
chr1 (2-135)||(40144814-40144947)
chr1 (3-135)||(26093413-26093545)
chr1 (1-136)||(37506141-37506279)
chr1 (19-135)||(45331376-45331492)
chr1 (2-134)||(917042-917174)
chr1 (1-137)||(6160424-6160560)
chr1 (3-126)||(16395023-16395145)
chr1 (17-136)||(42410027-42410146)
chr1 (2-129)||(12039100-12039227)
chr1 (1-136)||(31978618-31978753)
chr1 (2-135)||(32970534-32970667)
chr1 (1-129)||(31042814-31042942)
chr1 (1-136)||(2572486-2572620)
chr1 (1-100)||(7759232-7759331)
chr1 (16-131)||(32825963-32826077)
chr1 (3-97)||(36701940-36702034)
chr1 (3-97)||(36718044-36718138)
chr1 (7-100)||(24880899-24880992)
chr1 (2-122)||(12151194-12151314)
chr1 (6-136)||(38787363-38787493)
chr1 (2-119)||(10495857-10495973)
chr1 (4-129)||(23168966-23169091)
chr1 (3-140)||(30754903-30755040)
chr1 (8-136)||(41121788-41121919)
chr1 (2-97)||(8896337-8896432)
chr1 (2-129)||(9307645-9307772)
chr1 (3-86)||(14757610-14757693)
chr1 (17-136)||(33733229-33733347)
chr1 (16-136)||(34031492-34031613)
chr1 (17-100)||(28749024-28749107)
chr1 (2-129)||(44707733-44707860)
chr1 (1-136)||(52429361-52429496)
chr1 (8-103)||(17988557-17988654)
chr1 (1-135)||(44761498-44761632)
chr1 (10-135)||(5179366-5179491)
chr1 (2-129)||(6023622-6023749)
chr1 (2-129)||(24991626-24991753)
chr1 (19-136)||(11449920-11450035)
chr1 (6-100)||(37276483-37276577)
chr1 (8-104)||(22181360-22181456)
chr1 (17-75)||(29778423-29778481)
chr1 (19-105)||(49176952-49177038)
chr1 (5-130)||(22856216-22856334)
chr1 (3-121)||(21909987-21910104)
chr1 (2-68)||(32219695-32219761)
chr1 (10-91)||(3312137-3312218)
chr1 (3-136)||(13579587-13579720)
chr1 (3-91)||(6365650-6365738)
chr1 (40-124)||(43500762-43500846)
chr1 (5-136)||(6267822-6267953)
chr1 (19-122)||(35538678-35538781)
chr1 (6-68)||(52837302-52837364)
chr1 (4-53)||(16783256-16783305)
chr1 (1-74)||(24903988-24904061)
chr1 (16-137)||(41080630-41080751)
chr1 (41-136)||(27687298-27687394)
chr1 (53-124)||(35367622-35367694)
chr1 (3-51)||(35367821-35367869)
chr1 (37-97)||(43614450-43614510)
chr1 (10-97)||(45615557-45615644)
chr1 (6-100)||(4441605-4441699)
chr1 (54-136)||(7439881-7439963)
chr1 (4-50)||(15904771-15904817)
chr1 (16-97)||(978862-978943)
chr1 (2-83)||(7351654-7351735)
chr1 (3-91)||(9379250-9379339)
chr1 (20-97)||(31154164-31154241)
chr1 (2-34)||(25089154-25089186)
chr1 (2-78)||(27896973-27897049)
chr1 (2-118)||(29074902-29075017)
chr1 (29-92)||(7460438-7460501)
chr1 (4-91)||(34688858-34688945)
chr1 (4-91)||(34693386-34693473)
chr1 (10-52)||(13365999-13366041)
chr1 (4-86)||(15057450-15057531)
chr1 (40-102)||(15444481-15444543)
chr1 (17-91)||(26257951-26258025)
chr1 (58-99)||(4659831-4659872)
chr1 (19-68)||(9412837-9412886)
chr1 (3-52)||(37539146-37539195)
chr1 (58-102)||(11642239-11642283)
chr1 (19-87)||(51028508-51028576)
[»] chr5 (58 HSPs)
chr5 (2-127)||(6753629-6753753)
chr5 (2-139)||(21060648-21060785)
chr5 (1-136)||(1248565-1248700)
chr5 (2-136)||(7827887-7828021)
chr5 (3-135)||(40899937-40900069)
chr5 (2-149)||(27542813-27542959)
chr5 (2-136)||(6315738-6315872)
chr5 (1-129)||(29374359-29374487)
chr5 (2-122)||(40530199-40530319)
chr5 (1-147)||(27580617-27580762)
chr5 (18-136)||(38508148-38508266)
chr5 (2-136)||(30512646-30512781)
chr5 (2-136)||(30552986-30553121)
chr5 (1-119)||(8724987-8725105)
chr5 (3-97)||(15439319-15439413)
chr5 (1-129)||(31655070-31655198)
chr5 (2-96)||(6754047-6754140)
chr5 (2-124)||(2232046-2232164)
chr5 (11-136)||(32440168-32440293)
chr5 (17-136)||(41062124-41062240)
chr5 (3-122)||(4818570-4818689)
chr5 (22-129)||(9515784-9515891)
chr5 (16-136)||(2588029-2588142)
chr5 (2-119)||(8698327-8698444)
chr5 (2-100)||(19929964-19930062)
chr5 (6-124)||(15818453-15818573)
chr5 (38-135)||(41478881-41478978)
chr5 (3-95)||(11796169-11796261)
chr5 (1-73)||(29856064-29856136)
chr5 (12-129)||(843469-843582)
chr5 (14-97)||(18841509-18841592)
chr5 (3-130)||(5282361-5282488)
chr5 (6-129)||(41496102-41496225)
chr5 (2-132)||(3348088-3348225)
chr5 (6-92)||(4441043-4441129)
chr5 (2-100)||(6615877-6615975)
chr5 (6-127)||(11904227-11904349)
chr5 (38-131)||(41492356-41492449)
chr5 (2-119)||(42803598-42803715)
chr5 (2-69)||(38161440-38161507)
chr5 (19-97)||(37184079-37184157)
chr5 (4-77)||(8493858-8493931)
chr5 (2-83)||(11761313-11761393)
chr5 (2-65)||(26285510-26285573)
chr5 (2-129)||(29570410-29570537)
chr5 (14-100)||(5731806-5731892)
chr5 (7-100)||(22848381-22848474)
chr5 (5-97)||(18890555-18890647)
chr5 (17-104)||(7580999-7581090)
chr5 (7-104)||(39213369-39213469)
chr5 (18-91)||(14339337-14339410)
chr5 (1-68)||(5129261-5129328)
chr5 (6-64)||(7330529-7330587)
chr5 (53-91)||(40616077-40616115)
chr5 (52-97)||(3076658-3076703)
chr5 (38-99)||(9637873-9637934)
chr5 (16-52)||(32490489-32490525)
chr5 (70-134)||(42922830-42922894)
[»] chr4 (89 HSPs)
chr4 (2-136)||(47772988-47773122)
chr4 (6-136)||(17114462-17114592)
chr4 (2-136)||(25233199-25233333)
chr4 (2-136)||(33790700-33790834)
chr4 (1-136)||(52247397-52247532)
chr4 (2-136)||(11907568-11907702)
chr4 (2-136)||(38405071-38405205)
chr4 (2-129)||(32884819-32884946)
chr4 (1-136)||(52859768-52859903)
chr4 (2-136)||(38502451-38502585)
chr4 (2-136)||(49428311-49428445)
chr4 (2-135)||(11288600-11288732)
chr4 (3-131)||(3689581-3689709)
chr4 (2-129)||(47464341-47464468)
chr4 (2-129)||(43237261-43237388)
chr4 (2-120)||(35311208-35311326)
chr4 (1-121)||(34360672-34360792)
chr4 (2-130)||(49175909-49176037)
chr4 (3-131)||(54506807-54506935)
chr4 (1-139)||(7061630-7061768)
chr4 (3-131)||(2066808-2066936)
chr4 (8-136)||(5841396-5841524)
chr4 (12-136)||(28500860-28500984)
chr4 (6-136)||(2653442-2653570)
chr4 (2-129)||(17237272-17237399)
chr4 (17-136)||(36985819-36985938)
chr4 (2-100)||(35380338-35380436)
chr4 (14-100)||(42517643-42517729)
chr4 (40-138)||(51625139-51625237)
chr4 (4-133)||(42616875-42617004)
chr4 (2-130)||(53412126-53412254)
chr4 (2-136)||(6609779-6609914)
chr4 (1-124)||(16821312-16821435)
chr4 (2-129)||(22130061-22130192)
chr4 (3-129)||(53346778-53346904)
chr4 (19-120)||(46396868-46396969)
chr4 (1-129)||(2942621-2942748)
chr4 (1-125)||(30682176-30682300)
chr4 (1-104)||(19265825-19265928)
chr4 (2-100)||(6643665-6643763)
chr4 (3-129)||(40122830-40122956)
chr4 (1-83)||(50264102-50264184)
chr4 (19-96)||(29575143-29575220)
chr4 (1-97)||(461975-462071)
chr4 (23-139)||(27880208-27880323)
chr4 (3-119)||(44536182-44536298)
chr4 (2-85)||(26147635-26147718)
chr4 (2-129)||(38663424-38663550)
chr4 (2-100)||(21240709-21240807)
chr4 (26-139)||(8175546-8175659)
chr4 (17-97)||(30192238-30192318)
chr4 (19-95)||(32469958-32470034)
chr4 (3-130)||(48914118-48914250)
chr4 (1-96)||(47358958-47359053)
chr4 (19-129)||(4972595-4972705)
chr4 (7-98)||(11024897-11024988)
chr4 (2-85)||(18741494-18741577)
chr4 (6-100)||(39157878-39157973)
chr4 (6-136)||(18532201-18532331)
chr4 (19-97)||(39397379-39397457)
chr4 (2-92)||(49746979-49747069)
chr4 (2-107)||(35998829-35998934)
chr4 (19-124)||(52869107-52869212)
chr4 (19-101)||(10215168-10215250)
chr4 (23-92)||(3098757-3098826)
chr4 (4-97)||(20612179-20612272)
chr4 (45-98)||(21325171-21325224)
chr4 (3-78)||(7986993-7987068)
chr4 (37-95)||(35251942-35252000)
chr4 (6-91)||(16506248-16506332)
chr4 (38-91)||(41711470-41711523)
chr4 (2-90)||(43902269-43902360)
chr4 (20-92)||(17512352-17512424)
chr4 (82-130)||(25141889-25141937)
chr4 (23-67)||(29295253-29295296)
chr4 (15-63)||(37868640-37868688)
chr4 (7-101)||(23915434-23915528)
chr4 (52-98)||(31370312-31370358)
chr4 (58-100)||(34321716-34321758)
chr4 (2-91)||(49579192-49579281)
chr4 (12-73)||(12567214-12567275)
chr4 (7-92)||(21761010-21761095)
chr4 (84-133)||(50263904-50263953)
chr4 (4-96)||(2400798-2400890)
chr4 (24-100)||(5618582-5618658)
chr4 (26-62)||(16411435-16411471)
chr4 (2-54)||(25142430-25142482)
chr4 (59-103)||(43373653-43373697)
chr4 (55-91)||(45789157-45789193)
[»] chr6 (50 HSPs)
chr6 (2-135)||(6801949-6802082)
chr6 (2-139)||(15058135-15058272)
chr6 (2-136)||(11655908-11656042)
chr6 (10-136)||(1955941-1956067)
chr6 (2-136)||(3291730-3291864)
chr6 (2-136)||(13087548-13087682)
chr6 (2-136)||(32440607-32440741)
chr6 (3-139)||(1063562-1063698)
chr6 (1-121)||(1781820-1781939)
chr6 (2-134)||(30716918-30717050)
chr6 (2-136)||(29363324-29363458)
chr6 (2-121)||(31894187-31894306)
chr6 (19-133)||(21010212-21010326)
chr6 (3-100)||(13909443-13909540)
chr6 (5-118)||(23142688-23142801)
chr6 (2-117)||(5302369-5302484)
chr6 (2-97)||(24983450-24983545)
chr6 (2-136)||(17828958-17829091)
chr6 (1-138)||(7920256-7920392)
chr6 (1-129)||(3720210-3720338)
chr6 (2-91)||(1225065-1225154)
chr6 (16-91)||(21804536-21804610)
chr6 (3-90)||(15582302-15582389)
chr6 (2-73)||(34300013-34300084)
chr6 (2-87)||(11143597-11143683)
chr6 (7-68)||(8115068-8115129)
chr6 (23-136)||(27448118-27448231)
chr6 (17-133)||(6834334-6834450)
chr6 (9-140)||(28101317-28101448)
chr6 (2-129)||(181574-181700)
chr6 (51-130)||(8114980-8115059)
chr6 (2-65)||(16431038-16431101)
chr6 (2-56)||(4367295-4367349)
chr6 (37-123)||(7072213-7072299)
chr6 (14-100)||(26592352-26592438)
chr6 (6-63)||(8695067-8695124)
chr6 (28-100)||(2423662-2423734)
chr6 (2-130)||(17835402-17835529)
chr6 (6-97)||(25417966-25418057)
chr6 (7-105)||(12605456-12605554)
chr6 (26-107)||(4581972-4582053)
chr6 (26-86)||(4590610-4590670)
chr6 (2-50)||(34657610-34657658)
chr6 (3-38)||(22398432-22398467)
chr6 (1-91)||(7764246-7764335)
chr6 (19-97)||(27823338-27823416)
chr6 (1-46)||(13206884-13206929)
chr6 (7-100)||(32251887-32251980)
chr6 (2-63)||(33510158-33510218)
chr6 (19-52)||(34436271-34436304)
[»] chr2 (58 HSPs)
chr2 (3-136)||(16463708-16463841)
chr2 (2-136)||(39785603-39785740)
chr2 (2-136)||(15359048-15359182)
chr2 (1-136)||(39691507-39691642)
chr2 (3-136)||(37322447-37322581)
chr2 (3-136)||(45235600-45235733)
chr2 (2-136)||(36794302-36794436)
chr2 (3-136)||(14523333-14523466)
chr2 (2-136)||(36354404-36354538)
chr2 (1-126)||(43115773-43115898)
chr2 (2-126)||(16805899-16806023)
chr2 (2-126)||(16845180-16845304)
chr2 (24-135)||(32783404-32783515)
chr2 (1-136)||(43410443-43410578)
chr2 (2-136)||(17695348-17695482)
chr2 (2-136)||(25637499-25637632)
chr2 (2-129)||(5789616-5789743)
chr2 (2-125)||(31448665-31448788)
chr2 (2-136)||(34120400-34120532)
chr2 (37-130)||(19937730-19937823)
chr2 (3-111)||(35313906-35314014)
chr2 (4-108)||(41220935-41221039)
chr2 (6-121)||(16377632-16377747)
chr2 (2-100)||(8947049-8947147)
chr2 (1-119)||(34225607-34225725)
chr2 (19-92)||(1206708-1206781)
chr2 (2-86)||(17346373-17346457)
chr2 (26-100)||(43699596-43699670)
chr2 (1-62)||(26608178-26608239)
chr2 (49-122)||(27501513-27501586)
chr2 (46-129)||(3323254-3323337)
chr2 (6-101)||(31976370-31976465)
chr2 (17-104)||(34437994-34438081)
chr2 (57-135)||(26607930-26608008)
chr2 (7-104)||(38763571-38763668)
chr2 (6-96)||(39329663-39329754)
chr2 (24-139)||(10005083-10005197)
chr2 (6-97)||(32831175-32831266)
chr2 (2-85)||(35242309-35242392)
chr2 (2-91)||(19426473-19426563)
chr2 (2-92)||(34451340-34451430)
chr2 (17-130)||(18853167-18853281)
chr2 (1-41)||(19937402-19937442)
chr2 (4-91)||(43730635-43730720)
chr2 (3-129)||(11742497-11742622)
chr2 (19-97)||(27866527-27866604)
chr2 (43-92)||(28170588-28170637)
chr2 (60-129)||(39443789-39443858)
chr2 (1-97)||(28186231-28186326)
chr2 (80-135)||(5272155-5272210)
chr2 (17-68)||(38187912-38187963)
chr2 (9-63)||(2053283-2053337)
chr2 (4-50)||(26863405-26863451)
chr2 (15-64)||(3601415-3601464)
chr2 (31-88)||(36173351-36173408)
chr2 (14-55)||(38449159-38449200)
chr2 (2-34)||(3323335-3323367)
chr2 (2-38)||(18202123-18202159)
[»] chr8 (66 HSPs)
chr8 (2-134)||(31271039-31271171)
chr8 (2-133)||(10097958-10098089)
chr8 (1-136)||(10179911-10180046)
chr8 (3-136)||(32476306-32476439)
chr8 (7-124)||(1875568-1875685)
chr8 (2-136)||(31231748-31231883)
chr8 (19-136)||(34393918-34394035)
chr8 (3-135)||(4428317-4428448)
chr8 (7-101)||(396610-396704)
chr8 (2-136)||(17719222-17719356)
chr8 (3-148)||(13335235-13335379)
chr8 (2-123)||(21216078-21216199)
chr8 (2-91)||(44761503-44761592)
chr8 (1-129)||(39405779-39405907)
chr8 (2-129)||(45425637-45425764)
chr8 (1-135)||(7172931-7173065)
chr8 (1-119)||(9300094-9300212)
chr8 (2-136)||(22771799-22771933)
chr8 (2-136)||(40996329-40996463)
chr8 (3-136)||(51132-51264)
chr8 (4-129)||(39482635-39482760)
chr8 (16-136)||(2767255-2767375)
chr8 (26-128)||(7703128-7703230)
chr8 (3-129)||(11976907-11977033)
chr8 (16-118)||(42972490-42972592)
chr8 (9-124)||(26626088-26626203)
chr8 (40-131)||(36967417-36967508)
chr8 (2-100)||(34948687-34948785)
chr8 (23-129)||(39300912-39301018)
chr8 (2-88)||(42887018-42887104)
chr8 (18-87)||(41092028-41092097)
chr8 (2-78)||(17823939-17824015)
chr8 (6-97)||(5053156-5053247)
chr8 (2-97)||(31331426-31331521)
chr8 (14-97)||(33765690-33765773)
chr8 (1-97)||(4924070-4924166)
chr8 (2-98)||(31082637-31082733)
chr8 (3-92)||(40028531-40028624)
chr8 (2-136)||(27294023-27294157)
chr8 (2-92)||(34057626-34057716)
chr8 (11-92)||(44648540-44648621)
chr8 (53-129)||(1739709-1739785)
chr8 (54-129)||(6611767-6611842)
chr8 (30-97)||(39329065-39329132)
chr8 (17-135)||(9839791-9839909)
chr8 (2-56)||(32678421-32678475)
chr8 (53-135)||(32678787-32678869)
chr8 (7-100)||(14854934-14855027)
chr8 (6-54)||(1739565-1739613)
chr8 (3-55)||(35732140-35732192)
chr8 (6-74)||(39466063-39466131)
chr8 (3-50)||(29226578-29226625)
chr8 (7-91)||(3117029-3117111)
chr8 (2-91)||(5356618-5356706)
chr8 (53-100)||(29226231-29226278)
chr8 (46-136)||(6796009-6796099)
chr8 (17-99)||(7672342-7672424)
chr8 (1-35)||(39301021-39301055)
chr8 (26-91)||(12559635-12559700)
chr8 (53-130)||(21649308-21649385)
chr8 (16-96)||(5878993-5879073)
chr8 (16-100)||(6323335-6323418)
chr8 (40-104)||(8741083-8741147)
chr8 (3-43)||(12559582-12559622)
chr8 (17-97)||(15809985-15810063)
chr8 (40-104)||(40109790-40109854)
[»] scaffold0110 (1 HSPs)
scaffold0110 (2-135)||(1722-1855)
[»] scaffold0328 (1 HSPs)
scaffold0328 (2-136)||(7944-8078)
[»] scaffold0583 (1 HSPs)
scaffold0583 (16-136)||(2057-2177)
[»] scaffold0018 (1 HSPs)
scaffold0018 (3-129)||(136007-136133)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-100)||(105701-105800)
[»] scaffold0330 (1 HSPs)
scaffold0330 (2-135)||(5408-5541)
[»] scaffold0095 (2 HSPs)
scaffold0095 (1-129)||(50221-50349)
scaffold0095 (6-74)||(22370-22438)
[»] scaffold0182 (1 HSPs)
scaffold0182 (2-135)||(20317-20450)
[»] scaffold0159 (1 HSPs)
scaffold0159 (2-129)||(33989-34116)
[»] scaffold0294 (1 HSPs)
scaffold0294 (19-129)||(17070-17180)
[»] scaffold0302 (1 HSPs)
scaffold0302 (5-100)||(16119-16214)
[»] scaffold0003 (2 HSPs)
scaffold0003 (23-136)||(39127-39240)
scaffold0003 (53-136)||(252492-252575)
[»] scaffold1391 (1 HSPs)
scaffold1391 (19-133)||(1783-1897)
[»] scaffold0470 (1 HSPs)
scaffold0470 (54-129)||(1055-1130)
[»] scaffold1809 (1 HSPs)
scaffold1809 (16-86)||(697-767)
[»] scaffold0188 (1 HSPs)
scaffold0188 (39-97)||(6792-6850)
[»] scaffold0279 (1 HSPs)
scaffold0279 (27-100)||(12041-12114)
[»] scaffold0021 (1 HSPs)
scaffold0021 (7-100)||(126194-126287)
[»] scaffold2146 (1 HSPs)
scaffold2146 (16-73)||(437-494)
[»] scaffold0015 (1 HSPs)
scaffold0015 (4-76)||(42897-42969)


Alignment Details
Target: chr3 (Bit Score: 196; Significance: 1e-106; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 2 - 245
Target Start/End: Original strand, 45710868 - 45711110
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||  |||| ||||||||||||||||||||||| |||    
T  45710868 caacttaactactccactaactacaattaataaaagtgttttagtaaatgatattaattttaccatcaaaatcaacataattaatcattttcttaacaac 45710967  T
Q  102 cgtacatcaaccttaaacgactattatttagagacagaaaggagtataagtaaacaaagtgtgaggtgcacaatttcgaattggattggttgttctcttt 201  Q
    ||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45710968 cgtgcatcaaccttaaacgactattatttagagaccgaa-ggagtataagtaaacaaagtgtgaggtgcacaatttcgaattggattggttgttctcttt 45711066  T
Q  202 ttaatcacacgttacataaaaggacaacctatttggtttgccag 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  45711067 ttaatcacacgttacataaaaggacaacctatttggtttgccag 45711110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 30190757 - 30190617
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||| |||||    
T  30190757 caacttaactactccactaactacaattaataagggtattttagtaaatgatactaattttaccattgaaatcaacacaattaatcatttccttcataac 30190658  T
Q  102 cgtacatcaaccttaaacgactattatttagagacagaaag 142  Q
    ||| ||  ||||||||||||||||| ||||||||| |||||    
T  30190657 cgtgcacaaaccttaaacgactattttttagagacggaaag 30190617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 24569198 - 24569051
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| |||| |||||||||||||||||||||    
T  24569198 tcaacttaactactccactaactacaattaataagggtattttagtaaataatattaattttaccattgaaatcaacacaattaatcattttcttaataa 24569099  T
Q  101 ccgtacatcaaccttaaacgactattatttagagacagaaaggagtata 149  Q
     ||| ||| || ||||| ||||||| |||||||||| |||||| |||||    
T  24569098 tcgtgcataaatcttaagcgactataatttagagac-gaaaggtgtata 24569051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 52290910 - 52291045
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| ||||||||| ||||||||||  | ||||| |||||| |||||||||||||||  |||| || | |||||||||||||||||||||    
T  52290910 tcaacttaactactccactaactataattaataaggctgttttaataaatggtactaattttaccatcaaaatcaatacaattaatcattttcttaataa 52291009  T
Q  101 ccgtacatcaaccttaaacgactattatttagagac 136  Q
    ||||||||||||||||||||| ||||||||||||||    
T  52291010 ccgtacatcaaccttaaacgattattatttagagac 52291045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 37695762 - 37695628
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    |||||||||||| |||||||||||||||||||| || ||||||||||||||| |||||||||||||||||| |||| |||||||||||| |||||||| |    
T  37695762 aacttaactactccactaactacaattaataagggtgttttagtaaatgatattaattttaccattgaaatcaacacaattaatcatttccttaataatc 37695663  T
Q  103 gtaca-tcaaccttaaacgactattatttagagac 136  Q
    || ||   |||||||||||||||||||||||||||    
T  37695662 gtgcacaaaaccttaaacgactattatttagagac 37695628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 10366746 - 10366605
Alignment:
Q  2 caacttaactacttcactaactacaattaataa-------gagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttct 94  Q
    |||||||||||||||||||||||||||||||||       |||| ||||| |||||||||||||||||||||||||||| |||| |||||||||||||||    
T  10366746 caacttaactacttcactaactacaattaataattaataagagtgttttaataaatgatactaattttaccattgaaatcaacacaattaatcattttct 10366647  T
Q  95 taataaccgtacatcaaccttaaacgactattatttagagac 136  Q
    |||||| ||| ||  |||||||||||||| ||||||||||||    
T  10366646 taataatcgtgcacaaaccttaaacgactgttatttagagac 10366605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 129
Target Start/End: Original strand, 37311972 - 37312095
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgta 105  Q
    ||||||||| |||||||||||||||||||| || |||||||||||| ||||||||||||||||||||| |||| |||||||||||| |||||||| |||     
T  37311972 ttaactactccactaactacaattaataagggttttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtg 37312071  T
Q  106 catcaaccttaaacgactattatt 129  Q
    ||| ||||||||||||||| ||||    
T  37312072 cataaaccttaaacgactaatatt 37312095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 53560234 - 53560369
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||||||  |||||||| | |||||||| || |||||||||||||||| |||||||||||  |||| ||||||||||||||||| |||||| |    
T  53560234 tcaacttaactactctactaactatatttaataagggtgttttagtaaatgatacaaattttaccatcaaaatcaacataattaatcatttccttaatca 53560333  T
Q  101 ccgtacatcaaccttaaacgactattatttagagac 136  Q
     ||| |||||||||||||| ||||||||||||||||    
T  53560334 tcgtgcatcaaccttaaacaactattatttagagac 53560369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 8679151 - 8679017
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||| || ||||||||||| ||||||||||  | |||||||||||| ||||||||||||||||||||| |||| |||||||||||| ||||||||     
T  8679151 caacttaattaattcactaactataattaataaggatcttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataat 8679052  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    ||| ||| || ||||||||||||| ||||||||||    
T  8679051 cgtgcataaatcttaaacgactataatttagagac 8679017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 11905840 - 11905974
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||| ||| || ||||||||||||||||| ||  ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||     
T  11905840 caacttaacaactccattaactacaattaataagggtgctttagtaaatgatactaattttatcatcaaaattaacacaattaatcattttcttaataat 11905939  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    ||| ||| ||| |||||||| ||||||||||||||    
T  11905940 cgtgcataaactttaaacgagtattatttagagac 11905974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 132
Target Start/End: Complemental strand, 29024062 - 29023933
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||| |||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||  |||| |||| ||||||||||||| |||||||     
T  29024062 caacttaattactccactaactacaattaataaga-tgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatttttttaataat 29023964  T
Q  102 cgtacatcaaccttaaacgactattatttag 132  Q
    ||| ||| |||||||||||||||||| ||||    
T  29023963 cgtgcataaaccttaaacgactattaattag 29023933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 19823029 - 19823166
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||| | |||||||||||||||||||| || ||||||||||||||||||||| ||||||  |||| |||| |||||||||||| ||||||||     
T  19823029 caacttaactattccactaactacaattaataagggtgttttagtaaatgatactaattctaccatcaaaatcaacacaattaatcatttccttaataat 19823128  T
Q  102 cgtacatcaaccttaaacgactattatttagagacaga 139  Q
    ||| ||  |||||||||| ||||| |||||||||||||    
T  19823129 cgtgcacaaaccttaaacaactataatttagagacaga 19823166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 43253958 - 43253841
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccg 103  Q
    ||||||||||| |||||||||||||||||||| || |||||||||||| ||||||||||||||||||||| |||| |||||||||||| |||||||| ||    
T  43253958 acttaactactccactaactacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataatcg 43253859  T
Q  104 tacatcaaccttaaacga 121  Q
    | ||  ||||||||||||    
T  43253858 tgcacaaaccttaaacga 43253841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 36476603 - 36476736
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    ||||||||||||  ||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||| |||| ||| ||| |||||||||||||||    
T  36476603 aacttaactactctactaactacaattaataagggtattttagtaaatgatattaattttaccattgcaatcaacacaatcaattattttcttaataacc 36476702  T
Q  103 gtacatcaaccttaaacgactattatttagagac 136  Q
    ||  |  |||||||||| || || ||||||||||    
T  36476703 gtgaacaaaccttaaacaacaataatttagagac 36476736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 36460513 - 36460386
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||| |||| || |||||||||||||||||| ||||||| |||||| |||||||||||| ||||||||||||| ||||||| |||||||||||||     
T  36460513 caacttaattactccattaactacaattaataagaatattttaataaatgttactaattttactattgaaattaacacaattaataattttcttaataat 36460414  T
Q  102 cgtacatcaaccttaaacgactattatt 129  Q
    ||| ||  ||| ||||||||||| ||||    
T  36460413 cgtgcacaaactttaaacgactaatatt 36460386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 37497510 - 37497644
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| ||||||||||| |||| ||  || ||||||||||||||||||||||||||||  |||| |||| ||| |||||||| ||||||||     
T  37497510 caacttaactactccactaactacagttaacaacggtgttttagtaaatgatactaattttaccatcaaaatcaacacaataaatcatttccttaataat 37497609  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    ||| ||| || ||||||||| ||||||||||||||    
T  37497610 cgtgcataaatcttaaacgattattatttagagac 37497644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 27471352 - 27471472
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| |||||  || ||||||||||||| ||||||||||||  |||||||| ||||||||||| ||||||||||||||||||||||||||    
T  27471352 tcaacttaactactccactacttataattaataagagtgttttagtaaatgcaactaatttcaccattgaaatcaacataattaatcattttcttaataa 27471451  T
Q  101 ccgtacatcaaccttaaacga 121  Q
     ||| ||  || |||||||||    
T  27471452 tcgtgcacaaatcttaaacga 27471472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 51838057 - 51837922
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||| |||||||| ||||| |||||| ||||||| |||||||||||||||||| |||||||| ||||||||| |||| |||||||||||| |||||||     
T  51838057 tcaacgtaactactccactagctacaactaataagggtattttagtaaatgatattaattttatcattgaaatcaacacaattaatcatttacttaatac 51837958  T
Q  101 ccgtacatcaaccttaaacgactattatttagagac 136  Q
     | | ||  ||||||||| |||||| ||||||||||    
T  51837957 tcatgcacaaaccttaaatgactataatttagagac 51837922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 5323033 - 5322902
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    ||||||||||||| ||||| || |||||||||| |||||||||||||||||| |||||||| || |||||| |||||||||||||||||  ||||||| |    
T  5323033 aacttaactactttactaattataattaataagtgtattttagtaaatgatattaattttatcactgaaatcaacataattaatcattt--ttaataatc 5322936  T
Q  103 gtacatcaaccttaaacgactattatttagagac 136  Q
    || ||  |||||||||| ||||| ||||| ||||    
T  5322935 gtgcacaaaccttaaacaactataatttaaagac 5322902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 44301580 - 44301714
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| |||||| ||||||| ||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||  |||| ||||| |      
T  44301580 caacttaactactccactaattacaattgataagggtattttagtaaatgatactaattttatcattgaaatcaacataattaaatatttccttaaaagt 44301679  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    ||  ||  ||||||||||||| ||||||| |||||    
T  44301680 cgggcacaaaccttaaacgaccattattttgagac 44301714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 54726504 - 54726618
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    |||||||||||| || ||||||||||||||||   | ||||||||||||||| ||||||||||||  |||| |||| | |||||||||||||||||||||    
T  54726504 aacttaactactccattaactacaattaataaagatgttttagtaaatgatattaattttaccatcaaaatcaacacatttaatcattttcttaataacc 54726603  T
Q  103 gtacatcaaccttaa 117  Q
    || ||||||||||||    
T  54726604 gtgcatcaaccttaa 54726618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 17652770 - 17652900
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||||||| |||||||||||||||||||||  | |||||||||    ||||| |||||||||  |||| |||| |||||||||||| ||||||||     
T  17652770 caacttaactacctcactaactacaattaataaggatgttttagtaa----tactagttttaccatcaaaatcaacacaattaatcatttccttaataat 17652865  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    ||| ||| ||||| |||||||||||||||||||||    
T  17652866 cgtgcataaacctcaaacgactattatttagagac 17652900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 38795362 - 38795495
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||||||||||||||||||||| |||| |||||||||||| |||||  |     
T  38795362 caacttaacaactccaccaactacaattaataagggcatttgggtaaatgatactaattttaccattgaaataaacacaattaatcatttccttaaatat 38795461  T
Q  102 cgtacatcaaccttaaacgactattatttagaga 135  Q
    ||| ||  ||| ||||||||||||||||| ||||    
T  38795462 cgtgcacaaacattaaacgactattattttgaga 38795495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 49830162 - 49830282
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatca-ttttcttaataaccgtacatcaacctt 115  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||| |||||||| |||| ||||||||| |||| ||||||| ||| ||  ||| ||    
T  49830162 actaactacaattaataatggtattttagtaaatgatattaattttactattgaaatcaacacaattaatcattttttttaataatcgtgcacaaacgtt 49830261  T
Q  116 aaacgactattatttagagac 136  Q
    |||||||||| ||||||||||    
T  49830262 aaacgactataatttagagac 49830282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 23004479 - 23004353
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| |||||||||||||||||||| || |||||||| ||  |||||||||||||||||||||  ||| |||||||||||| ||||||||     
T  23004479 caacttaactactccactaactacaattaataagggtgttttagtatatactactaattttaccattgaaatcgacacaattaatcatttccttaataat 23004380  T
Q  102 cgtacatcaaccttaaacgactattatt 129  Q
     ||| |  ||||||||||||||| ||||    
T  23004379 agta-acaaaccttaaacgactaatatt 23004353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 37773062 - 37772927
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||| | |||| |||| |||||||||| |||||||||||||||||| |||||||||||||| ||| || | |||||||||||| ||||||||    
T  37773062 tcaacttaactattccactgactataattaataagggtattttagtaaatgatattaattttaccattgtaatcaatacaattaatcatttccttaataa 37772963  T
Q  101 ccgtacatcaaccttaaacgactattatttagagac 136  Q
     | | ||  ||||||||||| |||| || |||||||    
T  37772962 tcatgcacaaaccttaaacggctataatatagagac 37772927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 28690879 - 28690762
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||||||  ||||||||||||||||||||   ||||||||||||||||| |||||||||| ||||||| |||| ||||||||||||  |||||||     
T  28690879 caacttaactatctcactaactacaattaataaagatattttagtaaatgatattaattttaccgttgaaatcaacacaattaatcatttctttaataat 28690780  T
Q  102 cgtacatcaaccttaaac 119  Q
    ||| ||  ||||||||||    
T  28690779 cgtgcacaaaccttaaac 28690762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 34957522 - 34957655
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    |||| ||||||| ||||||||| ||||||||||  ||||| ||||||| |||| |||||||||||  || | |||| |||||||||||| |||| |||      
T  34957522 aactgaactactccactaactataattaataaggatatttaagtaaattatacaaattttaccatcaaattcaacacaattaatcatttccttagtaatt 34957621  T
Q  103 gtacatcaaccttaaacgactattatttagagac 136  Q
    || ||| |||||||||||||||||||||||||||    
T  34957622 gtccataaaccttaaacgactattatttagagac 34957655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 12736665 - 12736541
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgta 105  Q
    ||||||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| ||||  ||| |||| |||||||||||| ||||| || |||     
T  12736665 ttaactactacactaagtacaattaataagggtattgtagtaaatgatactaattttatcattagaatcaacacaattaatcatttccttaaaaatcgtg 12736566  T
Q  106 catcaaccttaaacgactattattt 130  Q
    ||  ||| |||||| ||||||||||    
T  12736565 cacaaactttaaacaactattattt 12736541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 3901246 - 3901151
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||| |||  |||||||||||| |||||||| | ||||||||||||||| |||||||| |||||||||||| | ||||||||||||||||||    
T  3901246 caacttaagtaccccactaactacaactaataagaatgttttagtaaatgatattaattttatcattgaaattaatacaattaatcattttcttaa 3901151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 54477557 - 54477467
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    |||||||||||||| || |||||||||||||||| | ||||||||||||||||| ||||||||||||| |||| |||| |||||| |||||    
T  54477557 tcaacttaactactccattaactacaattaataaaaatattttagtaaatgatattaattttaccattaaaatcaacacaattaaccattt 54477467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 19609318 - 19609451
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    |||||| ||||| ||||||| |||| |||||||| |||||| |||||||||| ||||||||| |||||||| |||| || ||||||||||||||| |  |    
T  19609318 aacttatctactccactaacaacaagtaataagaatatttttgtaaatgatattaattttacgattgaaatcaacacaaataatcattttcttaaaattc 19609417  T
Q  103 gtacatcaaccttaaacgactattatttagagac 136  Q
     ||||  || ||||||||| |||||||| |||||    
T  19609418 atacacaaatcttaaacgattattattttgagac 19609451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 19611928 - 19612052
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    |||||||||||| ||||||| ||||||||||||  ||||||||||||| ||| |||||||| ||||||||| |||| ||||||||| |||||||| || |    
T  19611928 aacttaactactccactaacaacaattaataaggatattttagtaaattata-taattttaacattgaaatcaacacaattaatcactttcttaaaaatc 19612026  T
Q  103 gtacatcaaccttaaacgactattat 128  Q
    |||||  ||| |||||| | ||||||    
T  19612027 gtacacaaactttaaacaattattat 19612052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 14194574 - 14194701
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||| |||| ||||||| |||||| |||| |||||||||||||||| ||||||||||| ||||||||| |||| |||| |||||||  |||| ||     
T  14194574 caacttaattactccactaac-acaattcataaaagtattttagtaaatggtactaattttatcattgaaatcaacacaattgatcatttctttaaaaat 14194672  T
Q  102 cgtacatcaaccttaaacgactattattt 130  Q
    ||| ||  |||||||||||||| ||||||    
T  14194673 cgtgcacaaaccttaaacgactgttattt 14194701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 30682163 - 30682068
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||| || | || |||||||||||||||||| ||||||||||||||||||| |||||| |||| ||||||| | |||||||||||| |||||    
T  30682163 caacttaattattccattaactacaattaataagattattttagtaaatgatactcattttaacattaaaattaaaacaattaatcatttccttaa 30682068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 3313272 - 3313395
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||| |||| || ||||||||||||||||| || ||||||| |||  |||||||||||||||||||||  |||    ||||||||||||||||||     
T  3313272 caacttaaatactccattaactacaattaataagggtgttttagttaattctactaattttaccattgaaatcgaca----taatcattttcttaataat 3313367  T
Q  102 cgtacatcaaccttaaacgactattatt 129  Q
    ||| ||  ||||||||||||||| ||||    
T  3313368 cgtgcacaaaccttaaacgactaatatt 3313395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 39043855 - 39043775
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatac---taattttaccattgaaattaaca 78  Q
    |||||||||||||| |||||||||||||||||||  |||||||||||||||||||   |||||||||||||||||| ||||    
T  39043855 tcaacttaactactccactaactacaattaataaaggtattttagtaaatgatactattaattttaccattgaaatcaaca 39043775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 34750518 - 34750603
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    ||||||||| ||| ||||||||||||||||  | ||||||||||||||||||||||||||||| |||| |||| ||| ||||||||    
T  34750518 ttaactactccaccaactacaattaataaggatgttttagtaaatgatactaattttaccattaaaatcaacacaatcaatcattt 34750603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 138
Target Start/End: Original strand, 43719289 - 43719420
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgta 105  Q
    ||||||||| ||||||||||||||||||||  | ||| ||| ||||||| ||||||||||||| |||| |||| ||||||||||||| ||||| | |||     
T  43719289 ttaactactccactaactacaattaataaggatgtttcagtgaatgata-taattttaccattaaaatcaacacaattaatcattttattaatgatcgtg 43719387  T
Q  106 catcaaccttaaacgactattatttagagacag 138  Q
     |  ||| |||| ||||||||||||||| ||||    
T  43719388 tacaaactttaaccgactattatttagacacag 43719420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 48541098 - 48541002
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    ||||||||||||||  ||||| |||||||||||||| ||||||| ||||||||| ||||||||  || |||||| ||||||||| |||||| |||||    
T  48541098 tcaacttaactactcaactaattacaattaataagaatattttaataaatgatattaattttattatagaaattgacataattagtcatttccttaa 48541002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 1778661 - 1778787
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||| ||||| ||||||||||||| ||||||  | ||||||||||||  | |||||||| ||||||||| |||| |||||||||||| ||||||||     
T  1778661 caacttatctactccactaactacaat-aataaggatgttttagtaaatgtcattaattttatcattgaaatcaacacaattaatcatttccttaataat 1778759  T
Q  102 cgtacatcaaccttaaacgactattatt 129  Q
    | | ||  ||||||||||||||| ||||    
T  1778760 catgcacaaaccttaaacgactaatatt 1778787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 11632099 - 11632225
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||  | |||||||||||||||||||  || |||||||||||  ||||||||||||| ||||||| |||| ||||||||||||| |||||||     
T  11632099 caacttaacttttccactaactacaattaataaaggtgttttagtaaatactactaattttaccgttgaaatcaacacaattaatcatttt-ttaataat 11632197  T
Q  102 cgtacatcaaccttaaacgactattatt 129  Q
    ||| ||  || |||||| ||||| ||||    
T  11632198 cgtgcacaaatcttaaatgactaatatt 11632225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 12904882 - 12904975
Alignment:
Q  2 caacttaactacttcactaactacaattaataagag-tattttagtaaatgatactaattttaccattgaaattaacataattaatcattttct 94  Q
    |||||||| |||| ||||||||||||||||||| || ||||||  ||||| ||||||||||||  |||||||| |||||||||||| |||||||    
T  12904882 caacttaattactccactaactacaattaataaaagatattttgataaatcatactaattttataattgaaatcaacataattaattattttct 12904975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 43870904 - 43870836
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaa 72  Q
    |||||||||||||||||||||| ||||| ||||||| |||||||||||| |||||||||| ||| ||||    
T  43870904 acttaactacttcactaactactattaaaaagagtactttagtaaatgaaactaattttatcatagaaa 43870836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 50035299 - 50035216
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||||||| ||  || |||| ||||||| |||||||||||  |||||||| |||||||||| |||||||||||||||    
T  50035299 actaactacaattaacaacggtgttttggtaaatgctactaattttattattgaaatcaacataattattcattttcttaataa 50035216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 30711108 - 30711190
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||||||  || ||||||||||||||| |||||||| |||| |||| |||||||||||| ||||  ||||||||    
T  30711108 taactacaattaataatggtgttttagtaaatgatattaattttatcattaaaatcaacataattaattatttctttaataac 30711190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 24245186 - 24245109
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataatta 84  Q
    |||||||||| ||||| |||||||||||| | | ||||||||||| ||||||||||||  |||||||| ||||||||||    
T  24245186 ttaactactttactaagtacaattaataata-tgttttagtaaataatactaattttattattgaaatcaacataatta 24245109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 41038490 - 41038448
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtatttta 44  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  41038490 caacttaactacttcattaactacaattaataagagtatttta 41038448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 10973559 - 10973652
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||| ||||||||||| |||||| ||  || | ||||||||||||||  |||||  |||| |||| ||||| ||||||||||||||||||||    
T  10973559 taactatttcactaactataattaacaacggtctattagtaaatgatacacattttgtcattaaaataaacattattaatcattttcttaataa 10973652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 37804802 - 37804843
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattt 42  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  37804802 tcaacttaactacttcactaactacaattaatgagagtattt 37804843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 39931656 - 39931749
Alignment:
Q  11 tacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgt 104  Q
    |||||||||||||| |||||||||| || ||||| ||||||||||  ||||| ||||| |||| ||||  |||||| ||||  |||||||||||    
T  39931656 tacttcactaactataattaataagtgtgttttaataaatgatacatattttgccattaaaatcaacactattaataatttctttaataaccgt 39931749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 130
Target Start/End: Original strand, 45811697 - 45811801
Alignment:
Q  25 caattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgacta 124  Q
    |||||||||| | ||||||| ||||| ||  ||||||||||||| |||| |||||||||||||||||||||||  | |  |||  |||||||||| ||||    
T  45811697 caattaataa-attattttattaaattatgttaattttaccattaaaatcaacataattaatcattttcttaaatatcacacacaaaccttaaacaacta 45811795  T
Q  125 ttattt 130  Q
    ||||||    
T  45811796 ttattt 45811801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 31158591 - 31158492
Alignment:
Q  29 taataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgactattat 128  Q
    ||||| |||| |||||||||||| || ||||||||| || ||||| | || ||||||||||||| ||||||| ||| ||  ||||||||||||||| |||    
T  31158591 taataggagtgttttagtaaatgttattaattttactatcgaaatcagcacaattaatcatttt-ttaataatcgtgcacaaaccttaaacgactaatat 31158493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 33491125 - 33491053
Alignment:
Q  57 aattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgactattatt 129  Q
    |||||||| |||||||| |||| |||||||||||| |||||||| ||| ||  ||||||||||||||| ||||    
T  33491125 aattttactattgaaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgactaatatt 33491053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 33491456 - 33491408
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaat 50  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||||||||    
T  33491456 caacttaactactccactaactataattaataagagtgttttagtaaat 33491408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 51064864 - 51064788
Alignment:
Q  53 tactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgactattatt 129  Q
    ||||||||||||||||||||  |||| ||||||||||||| ||||||  ||| ||| ||| ||||||||||| ||||    
T  51064864 tactaattttaccattgaaagcaacacaattaatcatttttttaatattcgtgcataaactttaaacgactaatatt 51064788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 52206921 - 52206849
Alignment:
Q  25 caattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    ||||||||||   ||||||||||||||||| |||||||||||||||||| ||  ||| ||||||||| |||||    
T  52206921 caattaataaatatattttagtaaatgatattaattttaccattgaaatcaatttaactaatcatttccttaa 52206849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 36463043 - 36462944
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||| |||| ||| ||| ||||||||||||  |||||||||||||| ||| ||||||| |||| |||| || |  || ||||||||| ||||||||    
T  36463043 caacttaattactccacaaacaacaattaataaggttattttagtaaatgctaccaattttaacattaaaatcaatactatcaatcatttttttaataac 36462944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 38705194 - 38705266
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatga---tactaattttaccattgaaat 73  Q
    ||||||| ||||  |||||||||||||||||||| || ||||||||||||   |||||||||||||||||||||    
T  38705194 aacttaattactcaactaactacaattaataagaata-tttagtaaatgatagtactaattttaccattgaaat 38705266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 26467128 - 26467252
Alignment:
Q  3 aacttaactacttcacta--actacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||||||| ||  ||||||||||||||   ||||||| ||||||||| ||| || | |||| |||| |||| ||| |||||||||||||  ||    
T  26467128 aacttaactacttcattataactacaattaataaacatattttaataaatgatattaactt-atcattaaaatcaacacaatcaatcattttcttacgaa 26467226  T
Q  101 ccgtacatcaaccttaaacgactatt 126  Q
      ||| || |||||||||||||||||    
T  26467227 ttgtatataaaccttaaacgactatt 26467252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 29595815 - 29595729
Alignment:
Q  11 tacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    ||||| ||||| || ||||||||| | ||||||| ||||| ||| ||||||||| ||| |||| || |||||||| |||||||||||    
T  29595815 tactttactaattataattaataaaaatattttaataaataatattaattttactattaaaatcaatataattaaccattttcttaa 29595729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 42278697 - 42278754
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaat 73  Q
    ||||||||| |||||||| |||| ||||||||||||||  ||||||||| ||||||||    
T  42278697 cactaactataattaatatgagtgttttagtaaatgatgttaattttacgattgaaat 42278754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 124
Target Start/End: Complemental strand, 49447873 - 49447769
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaacctta 116  Q
    ||||||||||||||||||| ||||||| |||||| ||| || |||   | ||||||| |||| ||||||||||||  ||||| | ||||||  ||| |||    
T  49447873 actaactacaattaataagggtattttggtaaataatattatttt---cgttgaaatcaacacaattaatcatttcgttaattatcgtacacaaacatta 49447777  T
Q  117 aacgacta 124  Q
    ||||||||    
T  49447776 aacgacta 49447769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 44685048 - 44684988
Alignment:
Q  37 gtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||| ||||||||| |||| ||| |||| |||| ||||||||||||||| |||||||    
T  44685048 gtattttaataaatgatattaatattatcattaaaatcaacataattaatcatcttcttaa 44684988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 25090127 - 25090053
Alignment:
Q  26 aattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||||| |||||| || ||| ||  ||||||| ||| |||||||||  | ||||||||||||||||||    
T  25090127 aattaataagagtgttttagaaattgaaacatattttacaattaaaattaacactactaatcattttcttaataa 25090053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 40194521 - 40194563
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtatttta 44  Q
    ||||| ||||||  |||||||||||||||||||||||||||||    
T  40194521 caactcaactacgccactaactacaattaataagagtatttta 40194563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 48893775 - 48893832
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaa 76  Q
    |||||| ||||||||||||| |||||| ||||||||   ||||||||||| |||||||    
T  48893775 taactataattaataagagtgttttagcaaatgatatatattttaccattaaaattaa 48893832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 42
Target Start/End: Original strand, 37804765 - 37804793
Alignment:
Q  14 ttcactaactacaattaataagagtattt 42  Q
    |||||||||||||||||||||||||||||    
T  37804765 ttcactaactacaattaataagagtattt 37804793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 37804854 - 37804898
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagta 47  Q
    |||||||||||| ||||||| | |||||||||| |||||||||||    
T  37804854 aacttaactactccactaaccataattaataagggtattttagta 37804898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 38137539 - 38137469
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatg---atactaattttaccattgaaat 73  Q
    ||||||||  ||||||||||| ||||||||| |||||||||| |||    |||||||||||| ||||||||    
T  38137539 ttaactaccccactaactacagttaataagaatattttagtagatgtcagtactaattttactattgaaat 38137469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 38512044 - 38512176
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    |||||||||||| || ||| |||||| |||||   ||||||| |||||||||  ||||||| |||| |||| || | ||||||| |||||   || || |    
T  38512044 aacttaactactccaataattacaatcaataaatatattttaataaatgatatcaattttatcattaaaatcaataaaattaattatttttaaaaaaatc 38512143  T
Q  103 gtacatcaaccttaaacgactattatttagaga 135  Q
     ||||  ||| ||||||||||||||||| ||||    
T  38512144 atacacaaactttaaacgactattattttgaga 38512176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 47825101 - 47825177
Alignment:
Q  26 aattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    |||| ||||| |||||||||||||||| ||  ||||||||||  |||||||||  |  ||||||||| |||||||||    
T  47825101 aattcataagggtattttagtaaatgaaacatattttaccatcaaaattaacactaccaatcatttttttaataacc 47825177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 98; Significance: 3e-48; HSPs: 78)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 27921013 - 27921146
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||| | ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  27921013 caacttaactaatgcactaactacaattaataagagtgttttaataaatgatactaattttaccattaaaatcaacataattaatcattttcttaataac 27921112  T
Q  102 cgtacatcaaccttaaacgactattatttagaga 135  Q
     || |||||||||||||| |||||||||||||||    
T  27921113 tgtgcatcaaccttaaacaactattatttagaga 27921146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 42935700 - 42935820
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaacctt 115  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||||||||  |||| |||| ||||||||||||||||||||||||| ||||||||||    
T  42935700 cactaactacaattaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacacaattaatcattttcttaataaccgtgcatcaacctt 42935799  T
Q  116 aaacgactattatttagagac 136  Q
    |||||||||||||||||||||    
T  42935800 aaacgactattatttagagac 42935820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 26974050 - 26974188
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgat---actaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||   | |||||||||||||||||| |||| |||||||||||| |||||    
T  26974050 tcaacttaactactccactaactacaattaataagagtattttagtaaatgatgatattaattttaccattgaaatcaacacaattaatcatttccttaa 26974149  T
Q  98 taaccgtacatcaaccttaaacgactattatttagagac 136  Q
    ||| ||| ||  |||||||||||||||| ||||||||||    
T  26974150 taatcgtgcacaaaccttaaacgactataatttagagac 26974188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 41506169 - 41506043
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||| |||||||||||| ||||||||     
T  41506169 caacttaactactccactaactacaattaataagagtgttttagtaaatgctactaattttaccattaaaattaacacaattaatcatttccttaataat 41506070  T
Q  102 cgtacatcaaccttaaacgactattatt 129  Q
    ||| ||| |||||| |||||||||||||    
T  41506069 cgtgcataaacctt-aacgactattatt 41506043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 34947525 - 34947659
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| |||||||||||||||||||| || ||||||||||||||| |||||||||||||||||| |||| ||||||||||||  |||||||     
T  34947525 caacttaactactccactaactacaattaataagggtgttttagtaaatgataataattttaccattgaaatcaacacaattaatcatttctttaataaa 34947624  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    | | ||  |||||||||||||||||||||||||||    
T  34947625 catgcacaaaccttaaacgactattatttagagac 34947659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 83411 - 83544
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    |||||||||||| | ||||||||||||||||||| | ||||||||||||||||||||||||||||  |||| |||| |||||||||||| ||||||||      
T  83411 aacttaactactccgctaactacaattaataagaatgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatttccttaataatt 83510  T
Q  103 gtacatcaaccttaaacgactattatttagagac 136  Q
    || ||| |||||||||||||||||||||||||||    
T  83511 gtgcataaaccttaaacgactattatttagagac 83544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 9786013 - 9786147
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||| | ||||||||||||  |||| |||| |||||||||||| ||||||||     
T  9786013 caacttaactacttcactaactacaattaataagcgtgttttagtaaatgaaattaattttaccatcaaaatcaacacaattaatcatttccttaataat 9786112  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    ||| ||   ||||||||||||||||||||||||||    
T  9786113 cgtgcacagaccttaaacgactattatttagagac 9786147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 2 - 155
Target Start/End: Complemental strand, 24516393 - 24516241
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| ||||||||||||||||||||  | |||||||||||| ||||||||||||||||||||| |||| ||||||||||||| |||||||     
T  24516393 caacttaactactccactaactacaattaataaggtttttttagtaaatgttactaattttaccattgaaatcaacacaattaatcattttattaataat 24516294  T
Q  102 cgtacatcaaccttaaacgactattatttagagacagaaaggagtataagtaaa 155  Q
    |||  || |||||||||||||||  |||  ||||||| | ||||||||||||||    
T  24516293 cgtgtataaaccttaaacgactaaaattatgagacag-agggagtataagtaaa 24516241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 28202413 - 28202279
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||| |||||| ||||||||||||||||||||  | ||||||||||||| | ||||||||||||  |||| |||| ||||||| ||||||||||||||    
T  28202413 caactttactactccactaactacaattaataaggatgttttagtaaatgacattaattttaccatcaaaatcaacacaattaattattttcttaataac 28202314  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    ||| ||| |||||||||| ||||||||||||||||    
T  28202313 cgtgcataaaccttaaacaactattatttagagac 28202279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 40076356 - 40076473
Alignment:
Q  18 ctaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaa 117  Q
    |||| |||||||||||| ||| ||||||||||||||||||||||||||||  ||||||||| ||||||||||||  ||||||| ||| ||| ||||||||    
T  40076356 ctaagtacaattaataatagtgttttagtaaatgatactaattttaccatcaaaattaacacaattaatcatttctttaataatcgtgcataaaccttaa 40076455  T
Q  118 acgactattatttagaga 135  Q
    ||||||||||||||||||    
T  40076456 acgactattatttagaga 40076473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 28103758 - 28103878
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||| |||||||||||||||||||||||| || |||| ||||||| | ||||||||||||||||||| |||| |||||||||||||||||||||     
T  28103758 caacttaaccacttcactaactacaattaataagggtgttttggtaaatgctgctaattttaccattgaaatcaacacaattaatcattttcttaataat 28103857  T
Q  102 cgtacatcaaccttaaacgac 122  Q
    ||| ||  |||||||||||||    
T  28103858 cgtgcacaaaccttaaacgac 28103878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 759195 - 759060
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| | ||||||||||||||||||  | |||||||||||||||||| |||||||||  |||| |||| |||||||||||| ||||||||     
T  759195 caacttaactactccgctaactacaattaataaggatgttttagtaaatgatactagttttaccatcaaaatcaacacaattaatcatttccttaataat 759096  T
Q  102 cgtacatcaaccttaaacgactattatttagagaca 137  Q
     || ||| ||||||||| ||||||||||||||||||    
T  759095 tgtgcataaaccttaaatgactattatttagagaca 759060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 7463238 - 7463365
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| ||||||||||||||||| || |||||| |||||||| ||||||||||| ||||||||| |||| |||||||||||| |||||||||    
T  7463238 caacttaactactccactaactacaattaatgagggtatttaagtaaatgctactaattttatcattgaaatcaacacaattaatcatttccttaataac 7463337  T
Q  102 cgtacatcaaccttaaacgactattatt 129  Q
    ||| ||  | ||||||||||||| ||||    
T  7463338 cgtgcacaatccttaaacgactaatatt 7463365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 32346157 - 32346034
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| |||||| || |||||||||||||||||||||| |||||| |||||||||||||||||| |||| ||| ||| |||| ||||||||    
T  32346157 tcaacttaactactccactaattataattaataagagtattttagtagatgatattaattttaccattgaaatcaacacaatcaattatttccttaataa 32346058  T
Q  101 ccgtacatcaaccttaaacgacta 124  Q
    |||||||  |||||||||| ||||    
T  32346057 ccgtacacaaaccttaaacaacta 32346034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 16560674 - 16560540
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||  ||||||||||||||||||||  | |||||||||||||||||| |||||||||  |||| |||| |||||||||||| ||||||||     
T  16560674 caacttaactaccccactaactacaattaataaggatgttttagtaaatgatactagttttaccatcaaaataaacacaattaatcatttccttaataat 16560575  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    ||| ||| || |||||| |||||||||||||||||    
T  16560574 cgtgcataaatcttaaatgactattatttagagac 16560540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 16604988 - 16605122
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||  ||||||||||||||||||||  | |||||||||||||||||| |||||||||  |||| |||| |||||||||||| ||||||||     
T  16604988 caacttaactaccccactaactacaattaataaggatgttttagtaaatgatactagttttaccatcaaaataaacacaattaatcatttccttaataat 16605087  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    ||| ||| || |||||| |||||||||||||||||    
T  16605088 cgtgcataaatcttaaatgactattatttagagac 16605122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 43873948 - 43874070
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| ||||||||||| |||||||| || ||||||||||||||| ||||||||||||  |||| |||| ||||||||||||  ||||||||    
T  43873948 caacttaactactccactaactacatttaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacacaattaatcatttctttaataac 43874047  T
Q  102 cgtacatcaaccttaaacgacta 124  Q
    | | |||||||||||||||||||    
T  43874048 catgcatcaaccttaaacgacta 43874070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 30865993 - 30866110
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    |||||||||||| |||||| || ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||  ||||||| |    
T  30865993 aacttaactactccactaattataattaataagagtattttagtaaatgatattaattataccattgaaattaacacaattaatcatttctttaataatc 30866092  T
Q  103 gtacatcaaccttaaacg 120  Q
    || ||  |||||||||||    
T  30866093 gtgcacaaaccttaaacg 30866110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 13961984 - 13962116
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| ||||||||||| ||||||||  ||||||| ||| ||||| |||||||| |||| |||| |||| |||||||||||| ||||||||     
T  13961984 caacttaactactccactaactacacttaataaggatattttattaagtgatattaattttatcattaaaatcaacacaattaatcatttccttaataaa 13962083  T
Q  102 cgtacatcaaccttaaacgactattatttagag 134  Q
    ||| ||| ||||||||| |||||||||||||||    
T  13962084 cgtgcataaaccttaaatgactattatttagag 13962116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 21390321 - 21390456
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    |||||||||||| ||||||||||||| ||||||  | ||||||||||||||| || |||||||||  ||||||||| |||||||||||| |||||||| |    
T  21390321 aacttaactactccactaactacaatcaataaggatgttttagtaaatgatattagttttaccatcaaaattaacacaattaatcatttccttaataatc 21390420  T
Q  103 gtacatcaaccttaaacgac--tattatttagagac 136  Q
    || ||| |||||||||||||  ||||||||||||||    
T  21390421 gtgcataaaccttaaacgactgtattatttagagac 21390456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 40 - 136
Target Start/End: Original strand, 44180268 - 44180364
Alignment:
Q  40 ttttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgactattatttagagac 136  Q
    ||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||| |||  || |||||||||||||||||||||||||||    
T  44180268 ttttagtaaattatactaattttaccattgaaatcaacacaattaatcattttcttaataatcgtgtataaaccttaaacgactattatttagagac 44180364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 11373532 - 11373405
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| |||||||||||||||||||| || |||||||||||| ||||||||||||||| ||||| |||| |||||| ||||| ||||||||     
T  11373532 caacttaactactccactaactacaattaataagggtgttttagtaaatgctactaattttaccatcgaaatcaacacaattaaacatttccttaataat 11373433  T
Q  102 cgtacatcaaccttaaacgactattatt 129  Q
    ||| ||  | ||||||||||||| ||||    
T  11373432 cgtgcacaatccttaaacgactaatatt 11373405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 22738726 - 22738853
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||| |  |||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||  ||| ||||||||||||  |||||||     
T  22738726 caacttaactaatctactaactacaattaatgaggatattttagtaaatgatactaattttaccattgaaatctacacaattaatcatttctttaataat 22738825  T
Q  102 cgtacatcaaccttaaacgactattatt 129  Q
    ||| ||| ||||||||||||||| ||||    
T  22738826 cgtgcataaaccttaaacgactaatatt 22738853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 38391773 - 38391892
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||| || | |||||||||||||||| |||||| ||||||||||||||||||||||||||||  |||| |||| |||||||||||||||||||||     
T  38391773 caacttaattattccactaactacaattaacaagagtgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcattttcttaataat 38391872  T
Q  102 cgtacatcaaccttaaacga 121  Q
     || ||| ||||||||||||    
T  38391873 tgtgcataaaccttaaacga 38391892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 33819238 - 33819356
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||| |||||| ||| ||| |||||||||||||||  ||| ||||||| ||||||||||||||||||||| |||| |||||||||||| ||||||||    
T  33819238 tcaacttcactactccacaaacaacaattaataagagtgattttgtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataa 33819337  T
Q  101 ccgtacatcaaccttaaac 119  Q
     ||||||| ||||||||||    
T  33819338 tcgtacattaaccttaaac 33819356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 34100651 - 34100553
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||||| ||||||||||||||||   |||||||||||||| |||||||||||| |||||||| |||| |||||||||||||||||||||    
T  34100651 caacttaactacttcagtaactacaattaataaagatattttagtaaatgctactaattttactattgaaatcaacacaattaatcattttcttaataa 34100553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 5524405 - 5524525
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||||||||  |||||||| ||||||||| ||| ||||| |||||| ||||||||||||||||||||| |||| |||||||||||||||||||||     
T  5524405 caacttaactactcaactaactataattaataaaagtgttttattaaatgttactaattttaccattgaaatcaacacaattaatcattttcttaataat 5524504  T
Q  102 cgtacatcaaccttaaacgac 122  Q
    ||| ||  ||| |||||||||    
T  5524505 cgtgcacaaactttaaacgac 5524525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 16904404 - 16904539
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||| || ||||||||||| |||||||| ||||||||||| || ||||| ||||||||| |||||||| |||| |||||||||||||||||| ||     
T  16904404 caacttaattatttcactaactataattaatacgagtattttagaaagtgataataattttactattgaaatcaacacaattaatcattttcttaaaaat 16904503  T
Q  102 cgtacatcaaccttaaacgactattatttagagaca 137  Q
      | ||  ||||||||||||||||||||| ||||||    
T  16904504 tttgcacaaaccttaaacgactattattttgagaca 16904539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 21760088 - 21759966
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| || |||||||||||| |||| || ||||| ||||||||||||||||||||||  |||| |||| |||||||||||||||||||||     
T  21760088 caacttaactactccattaactacaattagtaagggtgttttattaaatgatactaattttaccatcaaaatcaacacaattaatcattttcttaataat 21759989  T
Q  102 cgtacatcaaccttaaacgacta 124  Q
    | | ||  |||||||||||||||    
T  21759988 catgcacaaaccttaaacgacta 21759966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 2850971 - 2850851
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaacctt 115  Q
    ||||||||| ||||||| || |||||||||||||| ||| |||||||| ||||||||| ||||||||||||||||| |||||||| | | ||  |||| |    
T  2850971 cactaactataattaatgagggtattttagtaaataatattaattttatcattgaaatcaacataattaatcatttccttaataatcatgcacaaaccat 2850872  T
Q  116 aaacgactattatttagagac 136  Q
    |||||||||| ||||||||||    
T  2850871 aaacgactataatttagagac 2850851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 2459498 - 2459622
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccg 103  Q
    ||||||||||| |||||||||||||||||||| || || ||||||||||  ||||||||||| ||||||| |||| |||||||||||| |||||||| ||    
T  2459498 acttaactactccactaactacaattaataagggtgttgtagtaaatga--ctaattttaccgttgaaatcaacacaattaatcatttccttaataatcg 2459595  T
Q  104 tacatcaaccttaaacgactattattt 130  Q
    | ||  ||| ||||||||||| |||||    
T  2459596 tgcacaaacattaaacgactaatattt 2459622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 46478397 - 46478270
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||||||||  | ||||||||||||||||| ||||||||||||||| |||||| ||||| ||| ||||||||| ||||||||||||  |||||||     
T  46478397 caacttaactactcaattaactacaattaataagggtattttagtaaatgctactaactttactattaaaattaacacaattaatcatttaattaataat 46478298  T
Q  102 cgtacatcaaccttaaacgactattatt 129  Q
    |||  || ||| ||||||||||| ||||    
T  46478297 cgtgtatgaactttaaacgactaatatt 46478270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 19271837 - 19271715
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||| ||||  |||||||| | ||||||||| |||| ||||||||||||| |||||||     
T  19271837 caacttaactactccactaactacaattaataaaagtattttagtcaatgccactaatttgatcattgaaatcaacacaattaatcatttttttaataat 19271738  T
Q  102 cgtacatcaaccttaaacgacta 124  Q
    ||| ||  | | |||||||||||    
T  19271737 cgtgcacaagcattaaacgacta 19271715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 29835501 - 29835399
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaa 118  Q
    ||||| |||||||||||||| |||||||||||| |||||||||||||||| |||| ||||||||||||||||| |||||||| ||  ||  |||||||||    
T  29835501 taactgcaattaataagagtgttttagtaaatgctactaattttaccatttaaatcaacataattaatcatttccttaataagcgcgcacaaaccttaaa 29835402  T
Q  119 cga 121  Q
    |||    
T  29835401 cga 29835399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 44424169 - 44424294
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||| |||| ||||||||||| |||||||| ||      ||||||||||   ||||||||||  |||| |||| |||||||||||| |||||||||    
T  44424169 caacttaattactccactaactacatttaataagggt------gtaaatgata---attttaccatcaaaatcaacacaattaatcatttccttaataac 44424259  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    ||| |||||||||||||||||||||||||||||||    
T  44424260 cgtgcatcaaccttaaacgactattatttagagac 44424294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 3178308 - 3178210
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||||| |||||||||||||||||||  || ||||||||||||||| ||||||||||||  |||| |||| ||| |||||||| ||||||||    
T  3178308 caacttaactactccactaactacaattaataaaggtgttttagtaaatgatattaattttaccatcaaaatcaacacaatcaatcatttacttaataa 3178210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 7457509 - 7457427
Alignment:
Q  18 ctaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||| |||||||| || ||||||||||||  |||||||||||||||||||| |||||||||||||||||| |||||||    
T  7457509 ctaactacatttaataagggtcttttagtaaatgtaactaattttaccattgaaatcaacataattaatcatttttttaataa 7457427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 49101687 - 49101807
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattt---tagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||||||||| |||||||||||||||||| ||||||||   |||||||||||| |||||||| | || |||| |||| ||||||||||||||||||    
T  49101687 tcaacttaactactccactaactacaattaatatgagtattttaatagtaaatgatattaattttatccttaaaataaacacaattaatcattttcttaa 49101786  T
Q  98 taaccgtacatcaaccttaaa 118  Q
     || |||| |  |||||||||    
T  49101787 aaatcgtaaacaaaccttaaa 49101807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 17828455 - 17828358
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaata 99  Q
    |||||||| |||| |||||||||||||| ||||||||| ||| |||||||||| |||||||||||||||||| |||| || ||||| ||| |||||||    
T  17828455 caacttaattactccactaactacaattgataagagtaattttgtaaatgatattaattttaccattgaaatcaacaaaaataatcgtttccttaata 17828358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 21350729 - 21350605
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| |||||||||||||||||||| || |||||||||||   |||| ||||||||||||||| |||| |||||   |||| ||||||||     
T  21350729 caacttaactactccactaactacaattaataagggtgttttagtaaatacaactatttttaccattgaaatcaacacaatta---atttccttaataat 21350633  T
Q  102 cgtacatcaaccttaaacgactattatt 129  Q
    ||| ||  ||||||||||||||| ||||    
T  21350632 cgtgcacaaaccttaaacgactaatatt 21350605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 32018816 - 32018688
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||| ||||  |||||| |||||||||||||||||||||||||||||||  |||||||| |||||||| |||| ||||| ||||||  |||| ||     
T  32018816 caacttaattactctactaacgacaattaataagagtattttagtaaatgatagaaattttactattgaaatcaacacaattattcatttcattaaaaat 32018717  T
Q  102 cgtacatcaaccttaaacgactattattt 130  Q
    ||||||  ||  ||||| |||||||||||    
T  32018716 cgtacaaaaattttaaatgactattattt 32018688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 23670512 - 23670595
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaat 86  Q
    |||||||||||| |||||||||| |||||||||||| |||||||||||| || |||||||||||| ||||| |||| |||||||    
T  23670512 aacttaactactccactaactaccattaataagagtgttttagtaaatgctattaattttaccatggaaatcaacacaattaat 23670595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 8592543 - 8592417
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    ||||| |||||| |||||||||||||||||||| || ||||| |||||  ||||||||| ||||||||||| |||| ||||||||||||  ||||||| |    
T  8592543 aactttactactccactaactacaattaataagggtgttttattaaatactactaatttaaccattgaaatcaacacaattaatcatttctttaataatc 8592444  T
Q  103 gtacatcaaccttaaacgactattatt 129  Q
     | ||  ||||||||||| ||| ||||    
T  8592443 atgcacaaaccttaaacggctaatatt 8592417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 37245715 - 37245808
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttctta 96  Q
    ||||||||| ||| |||| | |||||||||||||||| |||||||||||| |||||| |||||||||||||| |||| |||||||| ||||||||    
T  37245715 caacttaaccactccacttattacaattaataagagtgttttagtaaatgctactaa-tttaccattgaaatcaacagaattaatctttttctta 37245808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 136
Target Start/End: Original strand, 46211472 - 46211590
Alignment:
Q  21 actacaattaataagagtattttagtaaatgata---ctaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaa 117  Q
    |||||||||||||||  | |||||||||||||||   ||| |||||||||  |||| |||| |||||||||||| ||||||||  || ||| ||||||||    
T  46211472 actacaattaataaggatgttttagtaaatgatagtactagttttaccatcaaaatcaacacaattaatcatttccttaataattgtgcataaaccttaa 46211571  T
Q  118 acgactattatttagagac 136  Q
    |||||||||||||| ||||    
T  46211572 acgactattatttaaagac 46211590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 97
Target Start/End: Complemental strand, 21937887 - 21937796
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    ||||||||| |||||||||||||||||||||||  |||||||||||| |||||||||| |||| |||| ||  ||| ||||||||| |||||    
T  21937887 ttaactactccactaactacaattaataagagtgctttagtaaatgacactaattttatcattaaaataaagttaactaatcatttccttaa 21937796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 2 - 91
Target Start/End: Complemental strand, 32019020 - 32018930
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccatt-gaaattaacataattaatcattt 91  Q
    |||||||| |||| ||||||| |||||||||||||||||||||||||||||||  |||||||| |||  |||| |||| ||||||||||||    
T  32019020 caacttaattactccactaacaacaattaataagagtattttagtaaatgatagaaattttactattcaaaatcaacacaattaatcattt 32018930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 104
Target Start/End: Original strand, 7930083 - 7930180
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgt 104  Q
    |||||| ||||||||||| |||||||||| || |||||||||||||  |  ||||| |||||||||| ||||  | ||||||||||||||||||||||    
T  7930083 taactatttcactaactataattaataagggtgttttagtaaatgaaccatatttttccattgaaatcaacactactaatcattttcttaataaccgt 7930180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 31930592 - 31930468
Alignment:
Q  11 tacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatca 110  Q
    |||| |||||||||||||||||||| ||||||||  |||| | | || |||||||||| |||| |||| | | ||||||||  ||||||| ||| ||| |    
T  31930592 tactccactaactacaattaataagggtattttaaaaaattagattagttttaccattaaaatcaacacagtcaatcatttctttaataatcgtgcataa 31930493  T
Q  111 accttaaacgactattatttagaga 135  Q
    || |||||||||||| |||||||||    
T  31930492 actttaaacgactataatttagaga 31930468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 135
Target Start/End: Original strand, 39452390 - 39452501
Alignment:
Q  23 tacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgac 122  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||| |||| ||||| |||||| ||||| ||||  |  ||     |||||||||||||    
T  39452390 tacaattaataagggtattttagtaaatgatattaattttaccattaaaatcaacat-attaattatttttttaaagattgtgtccaaaccttaaacgac 39452488  T
Q  123 tattatttagaga 135  Q
    |||||||||||||    
T  39452489 tattatttagaga 39452501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 48608891 - 48609011
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||||||| ||||||||||| |||||||||  | |||||||||    ||||| |||||||||  |||| |||| |||||||||||| ||||||||     
T  48608891 caacttaactacatcactaactacgattaataaggatgttttagtaa----tactagttttaccatcaaaatcaacacaattaatcatttccttaataat 48608986  T
Q  102 cgtacatcaaccttaaacgactatt 126  Q
    | | ||| ||||| |||||||||||    
T  48608987 catgcataaacctcaaacgactatt 48609011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 47045538 - 47045469
Alignment:
Q  21 actacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    ||||||||||||||| ||||||||| ||||||||||||||||| ||||||||| |||  ||||||||||||    
T  47045538 actacaattaataagggtattttaggaaatgatactaatttta-cattgaaatcaactcaattaatcattt 47045469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 6495038 - 6494973
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccat 67  Q
    |||||| |||||| ||||||||||||||||||| ||| ||||||||||| | ||||||||||||||    
T  6495038 caactttactactccactaactacaattaataaaagtgttttagtaaataacactaattttaccat 6494973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 36790852 - 36790905
Alignment:
Q  83 taatcattttcttaataaccgtacatcaaccttaaacgactattatttagagac 136  Q
    ||||||||| |||||||||||| ||| |||||||||||||||||||||||||||    
T  36790852 taatcatttccttaataaccgtgcataaaccttaaacgactattatttagagac 36790905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 17610638 - 17610571
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaat 73  Q
    ||||||| |||||||| || ||||||||||| ||||||| ||||| ||||||||||||||||| ||||    
T  17610638 ttaactatttcactaattaaaattaataagaatattttaataaattatactaattttaccattaaaat 17610571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 39005461 - 39005512
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccatt 68  Q
    |||||||||||||| |||  ||||||||||||||||||||||||||||||||    
T  39005461 actaactacaattattaaaggtattttagtaaatgatactaattttaccatt 39005512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 25571444 - 25571498
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatact 56  Q
    ||||||||||| | |||||||||||| ||||||| ||||||||||||||||||||    
T  25571444 caacttaactattccactaactacaactaataagggtattttagtaaatgatact 25571498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 35333069 - 35333151
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaa 85  Q
    |||||||||||| ||||||||||||||||||| | ||||||| ||||| ||| ||||| ||  |||||||| |||| ||||||    
T  35333069 aacttaactactccactaactacaattaataataatattttaataaataatattaattatataattgaaatcaacacaattaa 35333151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 27557048 - 27556975
Alignment:
Q  27 attaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||| ||||||||||||||||  ||||| ||||| |||| ||||| | ||||||||| ||||||||    
T  27557048 attaataagagtgttttagtaaatgatacacattttgccattaaaatcaacatcagtaatcatttccttaataa 27556975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 12631345 - 12631452
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaacctta 116  Q
    |||||||||||||||||||  | ||||  |||||  |||||||||||| |||||||| || | ||||||| |||| |||||||| ||| ||  |||||||    
T  12631345 actaactacaattaataaggatgttttgataaatactactaattttactattgaaatcaatacaattaattatttccttaataatcgtgcacaaacctta 12631444  T
Q  117 aacgacta 124  Q
    || |||||    
T  12631445 aatgacta 12631452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 24167021 - 24167080
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttacca 66  Q
    |||||||| |||||||||| ||||||||| |||||||||||||| | | |||||||||||    
T  24167021 taactactgcactaactactattaataagggtattttagtaaataacattaattttacca 24167080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 42796039 - 42796094
Alignment:
Q  8 aactacttcactaactacaattaataagagtattttagtaaatgatactaatttta 63  Q
    ||||||| |||||||||||||||||||| || ||||| |||||| |||||||||||    
T  42796039 aactactccactaactacaattaataagggtgttttaataaatgttactaatttta 42796094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 15464720 - 15464790
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcat 89  Q
    |||||| |||||| ||||||| |||||||||||||||  ||||||||||| |||| ||||  |||||||||    
T  15464720 taactataattaacaagagtactttagtaaatgatacacattttaccattaaaatcaacactattaatcat 15464790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 27903314 - 27903356
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaa 58  Q
    |||||||||||||||||| ||||||||| ||||||||||||||    
T  27903314 cactaactacaattaatacgagtattttggtaaatgatactaa 27903356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 31327482 - 31327550
Alignment:
Q  26 aattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttct 94  Q
    ||||||||||||| ||| ||||||||||||  |||||| |||| |||| ||||| ||| ||||||||||    
T  31327482 aattaataagagtgtttcagtaaatgatacatattttatcattaaaatcaacattattcatcattttct 31327550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 10042308 - 10042371
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccat 67  Q
    ||||||||||| || ||| || ||||||||||| ||||||| ||||||||| ||| ||||||||    
T  10042308 acttaactactccaataattataattaataagaatattttaataaatgatattaagtttaccat 10042371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 25531070 - 25531004
Alignment:
Q  26 aattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcatttt 92  Q
    ||||||||||||| |||||||||||||| |  ||||| ||||| |||| ||||  ||||||||||||    
T  25531070 aattaataagagtgttttagtaaatgatgcacattttgccattaaaatcaacactattaatcatttt 25531004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 7004441 - 7004474
Alignment:
Q  59 ttttaccattgaaattaacataattaatcatttt 92  Q
    |||||||||||||||| |||||||||||||||||    
T  7004441 ttttaccattgaaattgacataattaatcatttt 7004474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 7019799 - 7019832
Alignment:
Q  59 ttttaccattgaaattaacataattaatcatttt 92  Q
    |||||||||||||||| |||||||||||||||||    
T  7019799 ttttaccattgaaattgacataattaatcatttt 7019832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 7050312 - 7050345
Alignment:
Q  59 ttttaccattgaaattaacataattaatcatttt 92  Q
    |||||||||||||||| |||||||||||||||||    
T  7050312 ttttaccattgaaattgacataattaatcatttt 7050345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 104
Target Start/End: Complemental strand, 7348251 - 7348154
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgt 104  Q
    ||||||||||| |||||| ||||||||||||| ||||| | ||||||||  |||||  |||| |||| || |  |||||| ||||| || ||||||||    
T  7348251 taactacttcagtaactataattaataagagtgttttaattaatgatacatattttgtcattaaaatcaaaactattaatgatttttttcataaccgt 7348154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 101
Target Start/End: Complemental strand, 27167957 - 27167896
Alignment:
Q  40 ttttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||| ||||||  ||||||||||| |||| ||||| |||||||||||| || |||||    
T  27167957 ttttagtaattgatacacattttaccattaaaataaacattattaatcatttttttgataac 27167896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 104
Target Start/End: Original strand, 29121533 - 29121630
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgt 104  Q
    |||||||| ||||||| | ||||||| || || ||||||||||| | ||  ||||||||||| |||| ||||  ||| ||||||| |||| |||||||    
T  29121533 taactactccactaacaataattaatgagggtgttttagtaaattagacatattttaccattaaaatcaacaatattgatcatttccttagtaaccgt 29121630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 47254958 - 47255031
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcatttt 92  Q
    |||||| ||||||||||||| ||||||||||||| |   ||||||||| |||| | || || ||||||||||||    
T  47254958 taactataattaataagagtgttttagtaaatgaaatatattttaccaatgaagtcaatattattaatcatttt 47255031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 17610927 - 17610975
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaat 50  Q
    ||||||||||| |||| |||||||||||||||  | |||||||||||||    
T  17610927 caacttaactatttcaataactacaattaatacaaatattttagtaaat 17610975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 30107160 - 30107236
Alignment:
Q  21 actacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||| |||| ||||| |||||| ||||||| ||| ||||||||||||| |||| |||  || |||| ||||||||||    
T  30107160 actataattcataagggtatttaagtaaataatattaattttaccattaaaatcaactaaactaattattttcttaa 30107236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 30546457 - 30546365
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttctta 96  Q
    ||||||||||| || ||||||||||||||||  || ||||||||| ||| |  |||||| |||||||| | |||  |  ||||||||||||||    
T  30546457 acttaactactccaataactacaattaataaaggtgttttagtaagtgaaatcaatttttccattgaactcaaccaatctaatcattttctta 30546365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 38032765 - 38032805
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtatttta 44  Q
    ||||||||| | ||||||||||||||||||||| |||||||    
T  38032765 acttaactaatacactaactacaattaataagaatatttta 38032805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 2e-46; HSPs: 86)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 49224086 - 49223952
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||  |||| |||| ||||||||||||||||| ||||    
T  49224086 caacttaactactccactaactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcattttcttagtaac 49223987  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    ||| |||||| ||||||||||||||||||||||||    
T  49223986 cgtgcatcaatcttaaacgactattatttagagac 49223952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 39864129 - 39864263
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||| ||||||||     
T  39864129 caacttaactactccactaactacaattaataagagtattttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataat 39864228  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    ||| ||  ||| |||||||||||| ||||||||||    
T  39864229 cgtgcacaaactttaaacgactataatttagagac 39864263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 15699140 - 15699275
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatca-ttttcttaataa 100  Q
    ||||||||||||| |||||||||||||||||||| || ||||||||||||||| ||||||||||||  |||| |||| ||||||||| ||||||||||||    
T  15699140 caacttaactactccactaactacaattaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacacaattaatcatttttcttaataa 15699239  T
Q  101 ccgtacatcaaccttaaacgactattatttagagac 136  Q
    | || |||||||||||||||||||||||||||||||    
T  15699240 ctgtgcatcaaccttaaacgactattatttagagac 15699275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 20209940 - 20209806
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| ||||||||||||||||||||  | ||||||||||||||||||||||||| ||  |||| |||||||||||||||||||||||||||    
T  20209940 caacttaactactccactaactacaattaataaggatgttttagtaaatgatactaattttactatcaaaatcaacataattaatcattttcttaataac 20209841  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
     || ||||| | |||||||||||||||||||||||    
T  20209840 ggtgcatcacctttaaacgactattatttagagac 20209806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 40144947 - 40144814
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| || ||||||||||||||||| || ||||||||||||||| ||||||||||||  |||| |||| ||||||||||||||||||||||    
T  40144947 caacttaactactccattaactacaattaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacacaattaatcattttcttaataac 40144848  T
Q  102 cgtacatcaaccttaaacgactattatttagaga 135  Q
     || |||||| ||| |||||||||||||||||||    
T  40144847 tgtgcatcaatcttgaacgactattatttagaga 40144814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 26093413 - 26093545
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    ||||||| |||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||||||||| |||| ||||||||||||||||||||| |    
T  26093413 aacttaattacttcactaactacaattaataaggatattttaataaatgatattaattttaccattgaaatcaacacaattaatcattttcttaataatc 26093512  T
Q  103 gtacatcaaccttaaacgactattatttagaga 135  Q
    || ||  || |||||||||| ||||||||||||    
T  26093513 gtgcacaaatcttaaacgaccattatttagaga 26093545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 37506141 - 37506279
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgata---ctaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||||||||| ||||||||||||||||||| ||| |||||||||||||||   ||||||||| |||  |||| |||| |||||||||||| |||||    
T  37506141 tcaacttaactactccactaactacaattaataaaagtgttttagtaaatgatagtactaattttatcatcaaaatcaacacaattaatcatttccttaa 37506240  T
Q  98 taaccgtacatcaaccttaaacgactattatttagagac 136  Q
    ||||||| |||||||||||||||| ||||||||||||||    
T  37506241 taaccgtgcatcaaccttaaacgattattatttagagac 37506279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 45331376 - 45331492
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaa 118  Q
    ||||||||||||||||| || ||||||||||||||| ||||||||||||  |||| |||||||||||| ||||||||||||||||| | |||||||||||    
T  45331376 taactacaattaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacataattaattattttcttaataaccgtgcgtcaaccttaaa 45331475  T
Q  119 cgactattatttagaga 135  Q
    |||||||||||||||||    
T  45331476 cgactattatttagaga 45331492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 917042 - 917174
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||| |  ||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||| |||||||||||||||||  |||||||     
T  917042 caacttaactaatctactaactacaattaataagggtattttagtaaatgatattaattttaccatttaaatcaacataattaatcatttatttaataat 917141  T
Q  102 cgtacatcaaccttaaacgactattatttagag 134  Q
    ||| ||  |||||||||||||||| ||||||||    
T  917142 cgtgcacaaaccttaaacgactataatttagag 917174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 6160560 - 6160424
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||| | || |||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||| |||||||||||||||||| ||    
T  6160560 tcaacttaactattccattaactacaattaataagagtattttagtaaataatactaattttatcattgaaatcaacacaattaatcattttcttaaaaa 6160461  T
Q  101 ccgtacatcaaccttaaacgactattatttagagaca 137  Q
     ||||||  |  | |||||||||||||||| ||||||    
T  6160460 tcgtacacaagtcgtaaacgactattattttgagaca 6160424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 16395145 - 16395023
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    |||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||| ||  |||| |||| ||||||||||||||||||||| |    
T  16395145 aacttaactactccactaactacaattaaaaag-gtattttagtaaatgatactaattttactatcaaaatcaacacaattaatcattttcttaataatc 16395047  T
Q  103 gtacatcaaccttaaacgactatt 126  Q
    || ||| |||||||||||||||||    
T  16395046 gtgcataaaccttaaacgactatt 16395023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 42410027 - 42410146
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaacctta 116  Q
    ||||||||||||||||||| ||  |||||||||||||| ||||||||||||  |||| |||| ||||||||||||| ||||||||||| |||||||||||    
T  42410027 actaactacaattaataagggtgctttagtaaatgatattaattttaccatcaaaatcaacacaattaatcatttttttaataaccgtgcatcaacctta 42410126  T
Q  117 aacgactattatttagagac 136  Q
    ||| ||||||||||||||||    
T  42410127 aacaactattatttagagac 42410146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 12039100 - 12039227
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||| |||| || |||||||||||||||||||| | |||||||||| ||||||||||||||||||||| |||| |||||||||||| ||||||||     
T  12039100 caacttaaatactccattaactacaattaataagagtgtattagtaaatgttactaattttaccattgaaatcaacacaattaatcatttccttaataat 12039199  T
Q  102 cgtacatcaaccttaaacgactattatt 129  Q
    ||| ||  ||||||||||||||| ||||    
T  12039200 cgtgcacaaaccttaaacgactaatatt 12039227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 31978753 - 31978618
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| || |||||| ||||||||||| || |||||||| ||||| |||||||||||||||||| |||| |||||||| ||||||||||||    
T  31978753 tcaacttaactactccattaactataattaataagaatagtttagtaagtgatattaattttaccattgaaatcaacacaattaatctttttcttaataa 31978654  T
Q  101 ccgtacatcaaccttaaacgactattatttagagac 136  Q
     ||| ||  ||| |||||||||||| ||||||||||    
T  31978653 tcgtgcacaaactttaaacgactataatttagagac 31978618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 32970667 - 32970534
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||| || || |||||| |||||||||| |||||||||||||||| ||| |||||||| ||||||||| |||| |||||||||||||||||||||     
T  32970667 caacttaattattttactaacaacaattaatacgagtattttagtaaataatattaattttatcattgaaatcaacacaattaatcattttcttaataat 32970568  T
Q  102 cgtacatcaaccttaaacgactattatttagaga 135  Q
    |||| |  |||||||||||| |||||||| ||||    
T  32970567 cgtatacgaaccttaaacgaatattattttgaga 32970534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 31042814 - 31042942
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||| |||||||||| |||||||||||||| |||||  |||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||    
T  31042814 tcaacttaattacttcactacctacaattaataagggtattacagtaaatgatactaattttaccattgaaatcaacacaattaatcatttccttaataa 31042913  T
Q  101 ccgtacatcaaccttaaacgactattatt 129  Q
     | | ||  ||||||||| ||||| ||||    
T  31042914 tcatgcacaaaccttaaatgactaatatt 31042942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 2572486 - 2572620
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| |||||||||||||||||||  |||||| ||||||||||| |||||||||||||||||| || | ||||||||||| | |||||||    
T  2572486 tcaacttaactactccactaactacaattaataattgtattt-agtaaatgatattaattttaccattgaaatcaatacaattaatcattattttaataa 2572584  T
Q  101 ccgtacatcaaccttaaacgactattatttagagac 136  Q
     ||||||  ||| |||||||||||| ||||| ||||    
T  2572585 tcgtacacaaactttaaacgactataatttaaagac 2572620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 7759232 - 7759331
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||| ||||||| ||||| |||||||    
T  7759232 tcaacttaactattccactaactacaattaataagagtattttagtaaatgatattaatttcaccattgaaatcaacacaattaattatttttttaataa 7759331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 32826077 - 32825963
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaacctt 115  Q
    |||||| ||||||||||||  || ||||||||||||||||||||||||||||  |||| |||| | |||||||||| |||||||||||| ||||||||||    
T  32826077 cactaattacaattaataaaggtgttttagtaaatgatactaattttaccatcaaaatcaacaca-ttaatcatttccttaataaccgtgcatcaacctt 32825979  T
Q  116 aaacgactattattta 131  Q
    ||||||||||||||||    
T  32825978 aaacgactattattta 32825963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 36701940 - 36702034
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||| | | |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  36701940 aacttaacgattccactaactacaattaataagggcattttagtaaatgatactaattttaccattgaaatcaacataattaatcatttccttaa 36702034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 36718044 - 36718138
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||| | | |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  36718044 aacttaacgattccactaactacaattaataagggcattttagtaaatgatactaattttaccattgaaatcaacataattaatcatttccttaa 36718138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 24880899 - 24880992
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||| |||||||| | ||||||    
T  24880899 taactactccactaactacaattaataaaagtattttagtaaatgatattaattttaccattgaaatcaacataatcaatcatttccgtaataa 24880992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 12151194 - 12151314
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||||| || ||||||||||||||||| | | |||||||||||||||||||||||||| ||||||||| |||||||||||| || | ||||||||     
T  12151194 caacttaactgctccactaactacaattaattacaatattttagtaaatgatactaattttatcattgaaatcaacataattaataatctccttaataat 12151293  T
Q  102 cgtacatcaaccttaaacgac 122  Q
    | ||||  |||||||||||||    
T  12151294 catacacaaaccttaaacgac 12151314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 38787363 - 38787493
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgta 105  Q
    ||||||||| ||||||||| ||||||||||  | |||| | ||||||||||| |||||||||  |||| |||| ||| |||||||| |||||||| |||     
T  38787363 ttaactactccactaactataattaataaggatgttttggcaaatgatactagttttaccatcaaaatcaacacaatcaatcatttccttaataatcgtg 38787462  T
Q  106 catcaaccttaaacgactattatttagagac 136  Q
    ||| |||||||||||||||||||||||||||    
T  38787463 cataaaccttaaacgactattatttagagac 38787493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 10495857 - 10495973
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| |||||| |||||||||||| ||| ||||||||||||||||||||||||||||  |||| |||| ||||||| ||||| |||||||     
T  10495857 caacttaactactccactaattacaattaataa-agtgttttagtaaatgatactaattttaccatcaaaatcaacaaaattaataatttttttaataat 10495955  T
Q  102 cgtacatcaaccttaaac 119  Q
    | ||||| ||||||||||    
T  10495956 cttacataaaccttaaac 10495973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 23169091 - 23168966
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccg 103  Q
    ||||||||| || |||||||| ||||||||||  | |||||||||||| ||||||||||||||||||||| |||| ||||||| ||||||||||||| ||    
T  23169091 acttaactatttaactaactataattaataaggatgttttagtaaatgctactaattttaccattgaaatcaacacaattaattattttcttaataatcg 23168992  T
Q  104 tacatcaaccttaaacgactattatt 129  Q
    | ||  ||| ||||||||||| ||||    
T  23168991 tgcacaaactttaaacgactaatatt 23168966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 30755040 - 30754903
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    |||||||||| ||||||||||| |||||||||   ||||||||||||| |||  ||||||||| || |||| |||| |||||||||||| |||||||| |    
T  30755040 aacttaactatttcactaactataattaataatgatattttagtaaataatataaattttacccttaaaatcaacacaattaatcatttccttaataatc 30754941  T
Q  103 gtacatcaaccttaaacgactattatttagagacagaa 140  Q
    || ||| || ||||||||||||| ||||| ||||||||    
T  30754940 gtgcataaatcttaaacgactataatttaaagacagaa 30754903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 8 - 136
Target Start/End: Complemental strand, 41121919 - 41121788
Alignment:
Q  8 aactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttc---ttaataaccgt 104  Q
    ||||||| |||||||||||||||||||| |||||||||||||| || |||||||||||||  |||| |||| |||||||||||| |   |||||||  ||    
T  41121919 aactactccactaactacaattaataagggtattttagtaaattatgctaattttaccatcaaaatcaacacaattaatcatttcctaattaataaatgt 41121820  T
Q  105 acatcaaccttaaacgactattatttagagac 136  Q
     ||| |||||||||| ||||||||||||||||    
T  41121819 gcataaaccttaaacaactattatttagagac 41121788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 8896432 - 8896337
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    ||||||||| ||| |||||||||||||||||||   ||||||||||||||||| |||||||||||||||||| |||| ||| ||||||||||||||    
T  8896432 caacttaaccactccactaactacaattaataaatatattttagtaaatgatattaattttaccattgaaatcaacacaatcaatcattttcttaa 8896337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 9307645 - 9307772
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| |||||||||||||||| ||| || |||||||||||| || |||||||| ||||||||| |||| | |||||||||| ||||||||     
T  9307645 caacttaactactccactaactacaattaacaagggtgttttagtaaatgctattaattttatcattgaaatcaacacagttaatcatttccttaataat 9307744  T
Q  102 cgtacatcaaccttaaacgactattatt 129  Q
    |||  |  ||||||||||||||| ||||    
T  9307745 cgtgtacaaaccttaaacgactaatatt 9307772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 14757693 - 14757610
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaat 86  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| | ||||||| |||| |||||||    
T  14757693 aacttaactacttcactaactacaattaataagagtgttttagtaaatgttactaattttatcgttgaaatcaacacaattaat 14757610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 33733347 - 33733229
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaacctta 116  Q
    |||||||||||||||||| |||||||||||||||| || |||||||||||||||||| |||| || ||||||||| |||||||| ||| ||  ||| |||    
T  33733347 actaactacaattaataaaagtattttagtaaatgttaataattttaccattgaaatcaacacaa-taatcatttccttaataatcgtgcacaaacttta 33733249  T
Q  117 aacgactattatttagagac 136  Q
    ||||||||| |||| |||||    
T  33733248 aacgactataatttggagac 33733229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 34031613 - 34031492
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaacctt 115  Q
    |||||||||||||||||||  |||||||||||||||||| |||||||||||||| ||| |||| || ||||||||| |||||||| | | ||  ||||||    
T  34031613 cactaactacaattaataacggtattttagtaaatgatattaattttaccattggaatcaacacaagtaatcatttccttaataatcatgcacaaacctt 34031514  T
Q  116 aaac-gactattatttagagac 136  Q
    |||| |||||| ||||||||||    
T  34031513 aaacagactataatttagagac 34031492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 28749024 - 28749107
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||| ||||||||||||| || |||||||||||| ||||||||||||||||||||| |||| |||||||||||| ||||||||    
T  28749024 actaattacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataa 28749107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 44707860 - 44707733
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||||| ||||||||||||||||||||||  || |||||||||||  ||||||||||| ||||||||| || ||||||||||||||   ||||||     
T  44707860 caacttaactgcttcactaactacaattaataaatgtgttttagtaaatactactaattttatcattgaaatcaatataattaatcatttctataataat 44707761  T
Q  102 cgtacatcaaccttaaacgactattatt 129  Q
    ||| ||  ||| ||||||||||| ||||    
T  44707760 cgtgcaaaaactttaaacgactaatatt 44707733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 52429361 - 52429496
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| |||||||||||||||||||| |||||||| ||||||| | ||| |||||||| | ||| |||  |||||||||||| ||| ||||    
T  52429361 tcaacttaactactccactaactacaattaataagggtattttaataaatgacattaaatttaccatcgtaatcaaccaaattaatcatttccttcataa 52429460  T
Q  101 ccgtacatcaaccttaaacgactattatttagagac 136  Q
     ||| ||  ||||||||||||  || ||||||||||    
T  52429461 tcgtgcacaaaccttaaacgataataatttagagac 52429496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 17988654 - 17988557
Alignment:
Q  8 aactacttcactaactacaattaataagagtattttagtaaat--gatactaattttaccattgaaattaacataattaatcattttcttaataaccg 103  Q
    |||||||||| ||||||||||||||||||||||||||||||||   |||||||||||| ||||||||| |||| |||||||||  ||||||| |||||    
T  17988654 aactacttcattaactacaattaataagagtattttagtaaataatatactaattttaacattgaaatcaacacaattaatcacattcttaaaaaccg 17988557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 44761632 - 44761498
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||| | | ||||||||| |||||||||   ||||||||||||||||| |||||||| |||| ||||||||||||||||||||||| ||| |||    
T  44761632 tcaacttaaccattccactaactataattaataaagatattttagtaaatgatattaattttatcattaaaattaacataattaatcatttttttattaa 44761533  T
Q  101 ccgtacatcaaccttaaacgactattatttagaga 135  Q
     | ||||  |||  ||||||| ||| |||||||||    
T  44761532 tcatacacaaactctaaacgattataatttagaga 44761498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 135
Target Start/End: Complemental strand, 5179491 - 5179366
Alignment:
Q  10 ctacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatc 109  Q
    ||||| |||||||||||||||||| ||  | |||||||||||||||| ||||| | |||||||| |||| ||||||||||||| |||| || |||  |      
T  5179491 ctactccactaactacaattaatatgaaaactttagtaaatgatactcattttgctattgaaatcaacacaattaatcattttgttaagaatcgtgtaca 5179392  T
Q  110 aaccttaaacgactattatttagaga 135  Q
    |||||||||||||| |||||||||||    
T  5179391 aaccttaaacgactgttatttagaga 5179366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 6023749 - 6023622
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| || ||||||||||||||||  ||||||||||||| | |||||| |||||||||||||| |||| |||||| ||||| | ||||||     
T  6023749 caacttaactactccaataactacaattaataaaggtattttagtaaaagctactaaatttaccattgaaatcaacacaattaaacatttccgtaataat 6023650  T
Q  102 cgtacatcaaccttaaacgactattatt 129  Q
    ||  ||  ||| ||||||||||| ||||    
T  6023649 cgcgcacaaacattaaacgactaatatt 6023622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 24991753 - 24991626
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||| | |||||||||||||||||||  || || ||||||||  || |||||||||| ||||||| |||| |||||||||||| ||||||||     
T  24991753 caacttaactattccactaactacaattaataaaggtgttgtagtaaatactattaattttaccgttgaaatcaacacaattaatcatttccttaataat 24991654  T
Q  102 cgtacatcaaccttaaacgactattatt 129  Q
    |||  |  ||||||||||||||| ||||    
T  24991653 cgtgtacaaaccttaaacgactaatatt 24991626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 11449920 - 11450035
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaa 118  Q
    ||||||||||||||||  || || ||| |||| ||  |||||||||||||||||| ||||||||||| ||||| |||||||| ||| ||  |||||||||    
T  11449920 taactacaattaataaatgtgttatagaaaattat--taattttaccattgaaatcaacataattaaccatttccttaataatcgtgcacaaaccttaaa 11450017  T
Q  119 cgactattatttagagac 136  Q
    | ||||||||||||||||    
T  11450018 caactattatttagagac 11450035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 37276483 - 37276577
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||| | |||||||||||||||||||| || |||||||||| |||||||||||||||||  |||| |||| | |||||||||| ||||||||    
T  37276483 ttaactattccactaactacaattaataagggtgttttagtaaacgatactaattttaccatcaaaatcaacacagttaatcatttccttaataa 37276577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 22181360 - 22181456
Alignment:
Q  8 aactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgt 104  Q
    |||||| ||| |||||||||| | |||| || ||||||||||||||| |||||||||||||||||| |||  || ||||||||| ||||||||||||    
T  22181360 aactacctcattaactacaataactaagggtgttttagtaaatgatattaattttaccattgaaatgaactcaactaatcatttccttaataaccgt 22181456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 29778481 - 29778423
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaatta 75  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  29778481 actaactacaattaataatgatattttagtaaatgatactaattttaccattgaaatta 29778423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 49176952 - 49177038
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgta 105  Q
    |||||| ||||||||||||||||||||||||||| ||  |||||||| ||||||| ||||| |||||| |||| ||||||| |||||    
T  49176952 taactataattaataagagtattttagtaaatgacacatattttacctttgaaatcaacattattaattatttccttaatacccgta 49177038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 22856334 - 22856216
Alignment:
Q  5 cttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgt 104  Q
    |||||||||| ||||||||||||||||| || ||||||||||||||| || ||||||||  |||||||       |||||||||||| ||||| ||  ||    
T  22856334 cttaactactccactaactacaattaattagggtattttagtaaatggtattaattttatgattgaaa-------aattaatcatttccttaaaaaatgt 22856242  T
Q  105 acatcaaccttaaacgactattattt 130  Q
    |||  ||| |||||||||||||||||    
T  22856241 acacaaacattaaacgactattattt 22856216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 21910104 - 21909987
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    |||||||||||| | | ||||| | |||||||| || |||||| ||| |||||||||||||||||  |||| |||| |||||||||||| ||||||||      
T  21910104 aacttaactactcctcaaactatagttaataag-gtgttttagcaaacgatactaattttaccatcaaaatcaacacaattaatcatttccttaataatt 21910006  T
Q  103 gtacatcaaccttaaacga 121  Q
    || ||| ||||||||||||    
T  21910005 gtgcataaaccttaaacga 21909987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 32219761 - 32219695
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccatt 68  Q
    ||||||||| ||| ||| ||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  32219761 caacttaaccactccacaaactataattaataagagtattttaataaatgatattaattttaccatt 32219695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 3312137 - 3312218
Alignment:
Q  10 ctacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    ||||| ||||||||||||||||||  | |||| ||||||||||||||||||| | |||| |||| |||| ||||||||||||    
T  3312137 ctactccactaactacaattaatatcaatattatagtaaatgatactaatttaatcattaaaatcaacacaattaatcattt 3312218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 13579720 - 13579587
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    ||||||| |||| |||||||||||||||||| | || |||| |||||||||| |||| ||  |||  |||| |||| ||||||||||||  ||||||| |    
T  13579720 aacttaaatactccactaactacaattaatatgggtgtttttgtaaatgatattaatattgtcatcaaaatcaacacaattaatcatttctttaataatc 13579621  T
Q  103 gtacatcaaccttaaacgactattatttagagac 136  Q
     | ||| ||||||||| || ||||| ||||||||    
T  13579620 atgcataaaccttaaatgattattacttagagac 13579587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 6365650 - 6365738
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    |||||||||| |||||||||||||||||| ||   ||||||| ||||| |||||||||| |  |||||||| |||| ||||||||||||    
T  6365650 aacttaactaattcactaactacaattaacaatgatattttaataaataatactaatttgattattgaaatcaacacaattaatcattt 6365738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 43500846 - 43500762
Alignment:
Q  40 ttttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgacta 124  Q
    ||||||||||||| ||||||| ||||||  |||| |||| ||||||| |||| |||||||| ||| ||| |||||||||||||||    
T  43500846 ttttagtaaatgaaactaattataccatcaaaatcaacacaattaataatttccttaataatcgtgcataaaccttaaacgacta 43500762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 6267953 - 6267822
Alignment:
Q  5 cttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgt 104  Q
    |||||||||| || | |||||||  | ||| | |||||||||| ||||||||| ||||| |||| |||| |||| ||||||||||||  |||| ||  ||    
T  6267953 cttaactactccattgactacaaccattaaaaatattttagtacatgatactagttttatcattaaaatcaacacaattaatcatttctttaaaaatagt 6267854  T
Q  105 acatcaaccttaaacgactattatttagagac 136  Q
     ||  ||||||||||||||||||||| |||||    
T  6267853 gcacaaaccttaaacgactattattttgagac 6267822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 35538678 - 35538781
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaa 118  Q
    |||||||||||||||||  ||||||||||||| |||   |||||| ||||||||| |||| ||||||| |||||||||| ||  ||| || || ||||||    
T  35538678 taactacaattaataaggatattttagtaaataatatccattttatcattgaaatcaacacaattaataattttcttaaaaattgtaaataaatcttaaa 35538777  T
Q  119 cgac 122  Q
    ||||    
T  35538778 cgac 35538781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 52837302 - 52837364
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccatt 68  Q
    ||||||||| ||||| ||||||||||||||||||||||||||  ||| | |||||||||||||    
T  52837302 ttaactactccactagctacaattaataagagtattttagtagttgaaattaattttaccatt 52837364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 16783256 - 16783305
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgat 53  Q
    |||||||||||| | |||||||||||||||||||||| ||||||||||||    
T  16783256 acttaactactttaataactacaattaataagagtatattagtaaatgat 16783305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 24903988 - 24904061
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaatt 74  Q
    ||||||||||||| | ||||| || ||||||||| | |||||||||||||||||| ||||||  ||||||||||    
T  24903988 tcaacttaactacctaactaattataattaataaaaatattttagtaaatgatacaaattttctcattgaaatt 24904061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 41080630 - 41080751
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaacctt 115  Q
    |||||| ||||||||||||   ||||| | |||||||||  |||||||| ||| |||| |||| ||||||||||||| |||| |  | | ||| ||||||    
T  41080630 cactaattacaattaataaagatatttcaataaatgatataaattttactattaaaatcaacacaattaatcatttttttaaaattcatgcataaacctt 41080729  T
Q  116 aaacgactattatttagagaca 137  Q
    || |||||||||||| ||||||    
T  41080730 aatcgactattattttgagaca 41080751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 136
Target Start/End: Original strand, 27687298 - 27687394
Alignment:
Q  41 tttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgac-tattatttagagac 136  Q
    |||||||||| ||| |||||||||||||||||| |||| || |||||||||| |||||||  || ||  ||||||||| ||| ||| ||||||||||    
T  27687298 tttagtaaataatattaattttaccattgaaatcaacacaactaatcatttttttaataattgtgcacaaaccttaaaagacttataatttagagac 27687394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 35367694 - 35367622
Alignment:
Q  53 tactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaac-cttaaacgacta 124  Q
    |||||||||||||||  |||| |||| ||||||||||||||||||||| ||| ||| ||| ||||||||||||    
T  35367694 tactaattttaccatcaaaatcaacacaattaatcattttcttaataatcgtgcataaacgcttaaacgacta 35367622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 35367821 - 35367869
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatg 51  Q
    |||||||||||| |||||||||||||||||||| || ||||||||||||    
T  35367821 aacttaactactccactaactacaattaataagggtgttttagtaaatg 35367869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 43614450 - 43614510
Alignment:
Q  37 gtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||||| ||||||||||||||||||||| |||| |||| | |||||||||| |||||    
T  43614450 gtattttagtcaatgatactaattttaccattaaaatcaacacacttaatcatttccttaa 43614510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 45615557 - 45615644
Alignment:
Q  10 ctacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    ||||| |||||||||| ||||||||| | |||||||||||||| |||  |||||  ||| ||||||||| |  |||||||||||||||    
T  45615557 ctactccactaactactattaataagggaattttagtaaatgaaactccttttataattaaaattaacacagctaatcattttcttaa 45615644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 4441699 - 4441605
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||| |||| |||||||||||||||| ||| || ||||||||||    | ||||||||||||| |||| | || ||||||| |||||||||||||    
T  4441699 ttaattactccactaactacaattaacaagggtgttttagtaaagacgattaattttaccattaaaatcaccacaattaattattttcttaataa 4441605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 136
Target Start/End: Complemental strand, 7439963 - 7439881
Alignment:
Q  54 actaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgactattatttagagac 136  Q
    ||||||||||||||||||||| |||   |||||||||||  ||| || ||| ||  ||||||||||||||||||||| |||||    
T  7439963 actaattttaccattgaaattgacacggttaatcatttttctaaaaatcgtgcaaaaaccttaaacgactattattttgagac 7439881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 15904771 - 15904817
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaat 50  Q
    ||||||||||||||||||||||||||||||||  ||||||| |||||    
T  15904771 acttaactacttcactaactacaattaataaggatattttaataaat 15904817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 978943 - 978862
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||||| |||||||||  ||||| | ||||||| ||  |||||| ||||||||| |||| || |||||||||||||||    
T  978943 cactaactactattaataaggatatttcattaaatgaaacacattttatcattgaaatcaacacaactaatcattttcttaa 978862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 7351654 - 7351735
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataatt 83  Q
    |||||||| || | ||||||||| ||||||||||  ||||||||||||| ||| |||||||| |||| |||| |||| ||||    
T  7351654 caacttaattattccactaactagaattaataaggttattttagtaaataatattaattttatcattaaaatcaacacaatt 7351735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 9379250 - 9379339
Alignment:
Q  3 aacttaactacttc-actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    |||||||||||| | ||||||||||||||||||   ||||||| ||||||||| |||||||| |||| |||| |  | ||||||||||||    
T  9379250 aacttaactactcccactaactacaattaataaatatattttaataaatgatattaattttatcattaaaatcattacaattaatcattt 9379339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 31154164 - 31154241
Alignment:
Q  20 aactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||||||||||  | | ||||||| || |||||||||||| |||| |||| |||| ||||||||||||| ||||    
T  31154164 aactacaattaataaatgcaatttagtagataatactaattttatcattaaaatcaacacaattaatcattttattaa 31154241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 25089186 - 25089154
Alignment:
Q  2 caacttaactacttcactaactacaattaataa 34  Q
    |||||||||||||||||||||||||||||||||    
T  25089186 caacttaactacttcactaactacaattaataa 25089154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 27896973 - 27897049
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaaca 78  Q
    ||||| || |||| ||||||||| ||||||||||| ||||||  ||||| |||||||||||| |||| |||| ||||    
T  27896973 caactaaattactccactaactataattaataagaatattttgataaattatactaattttatcattaaaatcaaca 27897049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 29074902 - 29075017
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||| | |  |||| |||||||||| |  | ||||| ||||||||| ||||||||||||| |||| |||| || |||||||||| |||| | |    
T  29074902 caacttaactattacgttaacaacaattaatatggatgttttaataaatgatattaattttaccattaaaatcaacacaactaatcatttttttaaaacc 29075001  T
Q  102 cgtacatcaaccttaaa 118  Q
    |||| | ||||||||||    
T  29075002 cgta-aacaaccttaaa 29075017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 7460438 - 7460501
Alignment:
Q  29 taataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcatttt 92  Q
    |||||| ||| ||||||||||||| ||| || ||| ||||| |||||||| |||||||||||||    
T  7460438 taataaaagtgttttagtaaatgaaactcatattatcattgcaattaacacaattaatcatttt 7460501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 34688945 - 34688858
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    ||||||||| |  |||||||| ||||||||||  |  ||||||||| ||||||||||||| |||| |||| |||  ||||||||||||    
T  34688945 acttaactattcaactaactaaaattaataagcctggtttagtaaacgatactaattttatcatttaaatcaaccaaattaatcattt 34688858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 34693473 - 34693386
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    ||||||||| |  |||||||| ||||||||||  |  ||||||||| ||||||||||||| |||| |||| |||  ||||||||||||    
T  34693473 acttaactattcaactaactaaaattaataagcctggtttagtaaacgatactaattttatcatttaaatcaaccaaattaatcattt 34693386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 13366041 - 13365999
Alignment:
Q  10 ctacttcactaactacaattaataagagtattttagtaaatga 52  Q
    ||||| |||||||||| ||||||||| ||||||||||||||||    
T  13366041 ctactccactaactactattaataagggtattttagtaaatga 13365999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 15057450 - 15057531
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaat 86  Q
    ||||||||||| || |||||| ||||||||| | | ||||| || |||||||||||||||| ||| |||| ||| ||||||||    
T  15057450 acttaactactcca-taactataattaataaaaatgttttaatatatgatactaattttactattaaaatcaacttaattaat 15057531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 102
Target Start/End: Complemental strand, 15444543 - 15444481
Alignment:
Q  40 ttttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    ||||||||||| ||||  ||||||||||| |||| ||||  ||||||||||| ||||||||||    
T  15444543 ttttagtaaataatacatattttaccattaaaatcaacactattaatcatttccttaataacc 15444481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 26258025 - 26257951
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    |||||| || ||||||||  |||||||||||||||||| | ||||| | |||||||| || | ||||||||||||    
T  26258025 actaaccacgattaataaaggtattttagtaaatgataatcattttgctattgaaatcaatacaattaatcattt 26257951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 4659831 - 4659872
Alignment:
Q  58 attttaccattgaaattaacataattaatcattttcttaata 99  Q
    |||||| ||||||||| |||| ||||||||||||||||||||    
T  4659831 attttagcattgaaatcaacacaattaatcattttcttaata 4659872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 9412886 - 9412837
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccatt 68  Q
    |||||||||||||| ||| ||||||| |||||| | ||||||||||||||    
T  9412886 taactacaattaatcagaatattttattaaatgcttctaattttaccatt 9412837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 37539146 - 37539195
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatga 52  Q
    ||||||||||||  ||||||||||||||| |||||| || ||||||||||    
T  37539146 aacttaactactctactaactacaattaacaagagtgttgtagtaaatga 37539195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 11642239 - 11642283
Alignment:
Q  58 attttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    ||||||||||| |||| ||||  ||||||||||||||||||||||    
T  11642239 attttaccattaaaatcaacaatattaatcattttcttaataacc 11642283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 51028576 - 51028508
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatc 87  Q
    |||||||||||||||| | ||||||| |||||| |||||| ||||  ||| |||| |||| ||||||||    
T  51028576 taactacaattaataaaaatattttaataaatgctactaactttattattaaaatcaacacaattaatc 51028508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 8e-46; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 6753753 - 6753629
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||     
T  6753753 caacttaactactccactaactacaattaataagggtattttagtaaatgatactaattttaccattgaaattaata-aattaatcattttcttaataat 6753655  T
Q  102 cgtacatcaaccttaaacgactatta 127  Q
    ||| ||| ||||||||||||||||||    
T  6753654 cgtgcataaaccttaaacgactatta 6753629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 21060648 - 21060785
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||| |||| |||||||||||| | |||||||    
T  21060648 caacttaactactccactaactacaattaataagagtattttagtaaataatactaattttaccatcaaaataaacacaattaatcatttccctaataac 21060747  T
Q  102 cgtacatcaaccttaaacgactattatttagagacaga 139  Q
    ||| ||| |||||||||||||||||||||||| |||||    
T  21060748 cgtgcataaaccttaaacgactattatttagaaacaga 21060785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 1248700 - 1248565
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||| |||| ||||||||    
T  1248700 tcaacttaactacttcactaactacaattaataagggtattttagtaaatgatattaattttaccattgaaatcaacataattaataatttccttaataa 1248601  T
Q  101 ccgtacatcaaccttaaacgactattatttagagac 136  Q
    |||| ||  || |||||||||||||| |||| ||||    
T  1248600 ccgtgcacaaatcttaaacgactattttttaaagac 1248565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 7828021 - 7827887
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||| ||||||| |||||||||||||     
T  7828021 caacttaactactccactaactacaattaataagggtattttaataaatgatactaattttaccattgaaatcaacacaattaattattttcttaataat 7827922  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    |||  |  |||||||||||| ||||||||||||||    
T  7827921 cgtgtacaaaccttaaacgattattatttagagac 7827887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 40899937 - 40900069
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    |||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||| ||||  |||| |||| |||||||||||| ||||||||||    
T  40899937 aacttaactactccactaactacaattaataagggtgttttagtaaatgatactaattttgccatcaaaatcaacacaattaatcatttccttaataacc 40900036  T
Q  103 gtacatcaaccttaaacgactattatttagaga 135  Q
    || ||| ||||||||| ||||||||||||||||    
T  40900037 gtgcataaaccttaaatgactattatttagaga 40900069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 2 - 149
Target Start/End: Original strand, 27542813 - 27542959
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||| ||| |||||||| ||||||||     
T  27542813 caacttaactactccactaactacaattaataagagtattttagtaaatggtattaattttaccattgaaatcaacacaatcaatcatttccttaataat 27542912  T
Q  102 cgtacatcaaccttaaacgactattatttagagacagaaaggagtata 149  Q
    ||| ||  ||||||||||||| || |||||||||| ||| ||||||||    
T  27542913 cgtgcacaaaccttaaacgacaataatttagagac-gaatggagtata 27542959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 6315872 - 6315738
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||| ||| |||||||| ||||||||     
T  6315872 caacttaactacttcactaactacaattaataagggtattttagtaaatgatattaattttatcattgaaattaacacaatcaatcatttccttaataat 6315773  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    ||   |  | |||||||||||||| ||||||||||    
T  6315772 cgagtacaacccttaaacgactataatttagagac 6315738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 29374359 - 29374487
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||| ||||||||| |||||||||||||||||||  || |||||||||||| || |||||||| ||||||||| ||||||||||||||||||||||||||    
T  29374359 tcaatttaactactccactaactacaattaataaaggtcttttagtaaatgctattaattttatcattgaaatcaacataattaatcattttcttaataa 29374458  T
Q  101 ccgtacatcaaccttaaacgactattatt 129  Q
    || || || ||||||||||||||| ||||    
T  29374459 ccttaaataaaccttaaacgactaatatt 29374487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 40530319 - 40530199
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||| ||| |||||||||||||||||||| || |||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||     
T  40530319 caacttaaccactccactaactacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcattttcttaataat 40530220  T
Q  102 cgtacatcaaccttaaacgac 122  Q
    ||| ||   ||||||||||||    
T  40530219 cgtgcacagaccttaaacgac 40530199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 27580617 - 27580762
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa-ta 99  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||| |||||||||||| || || ||    
T  27580617 tcaacttaactactccactaactacaattaataagggtattttagtaaatgatattaattttaccattgaaatcaacacaattaatcatttcctaaatta 27580716  T
Q  100 accgtacatcaaccttaaacgactattatttagagacagaaaggagta 147  Q
    | ||| ||  ||||||||| |||||| ||||||| || ||||||||||    
T  27580717 atcgtgcagaaaccttaaa-gactataatttagaaac-gaaaggagta 27580762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 38508266 - 38508148
Alignment:
Q  18 ctaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaa 117  Q
    ||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||| |||||||||||||||||| || ||  ||  || |||||    
T  38508266 ctaactacaattaataagagtattttaatgagtgatactaattttaccattgaaattaacacaattaatcattttcttaaaaatcgagcacaaatcttaa 38508167  T
Q  118 acgactattatttagagac 136  Q
    ||||||||||||| |||||    
T  38508166 acgactattattttgagac 38508148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 30512781 - 30512646
Alignment:
Q  2 caacttaactacttcactaactacaa-ttaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||| |||||||||||||  ||||||||||||| ||||||||||||  |||||||||||||||||| || | |||||||||||| ||||||||    
T  30512781 caacttaactatttcactaactacatgttaataagagtatcttagtaaatgatgttaattttaccattgaaatcaatacaattaatcatttccttaataa 30512682  T
Q  101 ccgtacatcaaccttaaacgactattatttagagac 136  Q
     ||| ||| ||| ||| |||||||| ||||||||||    
T  30512681 tcgtgcataaactttatacgactataatttagagac 30512646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 30553121 - 30552986
Alignment:
Q  2 caacttaactacttcactaactacaa-ttaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||| |||||||||||||  ||||||||||||| ||||||||||||  |||||||||||||||||| || | |||||||||||| ||||||||    
T  30553121 caacttaactatttcactaactacatgttaataagagtatcttagtaaatgatgttaattttaccattgaaatcaatacaattaatcatttccttaataa 30553022  T
Q  101 ccgtacatcaaccttaaacgactattatttagagac 136  Q
     ||| ||| ||| ||| |||||||| ||||||||||    
T  30553021 tcgtgcataaactttatacgactataatttagagac 30552986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 8725105 - 8724987
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||| ||||||||| |||||||||||||||||||| || ||||||||||||||| |||||||||||||||||| |||| ||||||||||||  |||||||    
T  8725105 tcaagttaactactccactaactacaattaataagtgtgttttagtaaatgatattaattttaccattgaaatcaacacaattaatcatttctttaataa 8725006  T
Q  101 ccgtacatcaaccttaaac 119  Q
     ||| ||  ||||||||||    
T  8725005 tcgtgcacaaaccttaaac 8724987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 15439413 - 15439319
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||||||| | |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||    
T  15439413 aacttaactactactctaaatacaattaataaaagtattttagtaaatgatactaattttaccattgaaattaatacaattaatcatttccttaa 15439319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 31655070 - 31655198
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||| ||| |||| ||||||||||||||||||||  |||| |||||||||||| |||||||||||||||||| |||| ||||||||||||  |||||||    
T  31655070 tcaacataattactccactaactacaattaataaggatattatagtaaatgatattaattttaccattgaaatcaacacaattaatcatttctttaataa 31655169  T
Q  101 ccgtacatcaaccttaaacgactattatt 129  Q
     ||||||  ||| ||||||||||| ||||    
T  31655170 tcgtacacaaactttaaacgactaatatt 31655198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 6754047 - 6754140
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttctta 96  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||| | ||||||||| |||||||| |||| |||||||||||||||||    
T  6754047 caacttaactactccactaactacaattaataagagtgttttagtaaatgacattaattttactattgaaatcaaca-aattaatcattttctta 6754140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 2232164 - 2232046
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| ||||||    ||||||||||||| ||||| |||||| ||||||||||||||||||||| |||| ||||| |||||||||||||||     
T  2232164 caacttaactactccactaa----aattaataagagttttttaataaatgctactaattttaccattgaaatcaacacaattattcattttcttaataat 2232069  T
Q  102 cgtacatcaaccttaaacgacta 124  Q
    ||| ||  |||||||||||||||    
T  2232068 cgtgcacaaaccttaaacgacta 2232046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 11 - 136
Target Start/End: Original strand, 32440168 - 32440293
Alignment:
Q  11 tacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatca 110  Q
    ||||| ||||| ||||||||||||| |||||||||||||||||| |||||||| |||||||||||||| ||||||||||||  |||| || | | ||  |    
T  32440168 tactttactaagtacaattaataagggtattttagtaaatgatattaattttatcattgaaattaacacaattaatcatttctttaaaaatcatgcacaa 32440267  T
Q  111 accttaaacgactattatttagagac 136  Q
    ||||| |||||||||||||| |||||    
T  32440268 acctttaacgactattattttgagac 32440293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 41062240 - 41062124
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaacctta 116  Q
    ||||||||||||||||||| || |||||||||||||||||||||||| |||  |||| |||||||||||| |||||||   || |||| |||||||||||    
T  41062240 actaactacaattaataagggtgttttagtaaatgatactaattttatcatcaaaatcaacataattaattattttct---tatccgtgcatcaacctta 41062144  T
Q  117 aacgactattatttagagac 136  Q
    || |||||||||||| ||||    
T  41062143 aaagactattatttaaagac 41062124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 122
Target Start/End: Original strand, 4818570 - 4818689
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    |||||||  ||| |||||||||||||||||||| || |||||||||||| |||||||||||| |||||||| |||| ||||||| |||| |||||||| |    
T  4818570 aacttaatcactccactaactacaattaataagggtgttttagtaaatgctactaattttacaattgaaatcaacacaattaattatttccttaataatc 4818669  T
Q  103 gtacatcaaccttaaacgac 122  Q
    || ||  |||||||||||||    
T  4818670 gtgcacaaaccttaaacgac 4818689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 9515784 - 9515891
Alignment:
Q  22 ctacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacga 121  Q
    |||| |||||||||  | |||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||| ||| ||  ||||||||||||    
T  9515784 ctactattaataaggatgttttagtaaatgatactaattttaccattgaaatcaacacaattaatcattatcttaataatcgtgcacaaaccttaaacga 9515883  T
Q  122 ctattatt 129  Q
    ||| ||||    
T  9515884 ctaatatt 9515891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 2588142 - 2588029
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaacctt 115  Q
    |||||||||||||||||||| || ||||||||       |||||||||||||  |||| |||| |||||||||||| ||||||||| || ||||||||||    
T  2588142 cactaactacaattaataagggtgttttagta-------ctaattttaccatcaaaatcaacacaattaatcatttccttaataactgtgcatcaacctt 2588050  T
Q  116 aaacgactattatttagagac 136  Q
    |||||||||||||||||||||    
T  2588049 aaacgactattatttagagac 2588029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 8698327 - 8698444
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||| ||| |||||||||||||||||||| || |||| |||||||  |||||||||||||||||||| |||| ||||||||||||  |||||||     
T  8698327 caacttaaccactccactaactacaattaataagggtgttttggtaaatgcaactaattttaccattgaaatcaacacaattaatcatttctttaataat 8698426  T
Q  102 cgtacatcaaccttaaac 119  Q
    ||| ||  ||||||||||    
T  8698427 cgtgcacaaaccttaaac 8698444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 19929964 - 19930062
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||| ||||||||||||||||||||||  | |||||||||||||  ||| |||||||||  |||| |||| |||||||||||||||||||||    
T  19929964 caacttaactatttcactaactacaattaataaggatgttttagtaaatgacgctagttttaccatcaaaatcaacaaaattaatcattttcttaataa 19930062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 124
Target Start/End: Complemental strand, 15818573 - 15818453
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaat--gatactaattttaccattgaaattaacataattaatcattttcttaataaccg 103  Q
    ||||||||| |||| | ||||||||||||  || |||||||||||  | ||||||||||||||||||||| |||| |||||| ||||| |||||||| ||    
T  15818573 ttaactactccactgattacaattaataaaggtgttttagtaaatatgctactaattttaccattgaaatcaacacaattaaacatttccttaataatcg 15818474  T
Q  104 tacatcaaccttaaacgacta 124  Q
    | ||| |||||||||||||||    
T  15818473 tgcataaaccttaaacgacta 15818453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 38 - 135
Target Start/End: Original strand, 41478881 - 41478978
Alignment:
Q  38 tattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgactattatttagaga 135  Q
    ||||||||||||||| |||||||||||||||||||| | || |||||||||||||||||| || ||  ||  ||||||| ||||||||||||||||||    
T  41478881 tattttagtaaatgacactaattttaccattgaaataagcacaattaatcattttcttaaaaatcgcgcacaaaccttagacgactattatttagaga 41478978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 11796261 - 11796169
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttctt 95  Q
    |||||||||||| ||||||||||||||||||| | ||||||||||||| ||| |||||||| |||| |||| |||| |||||| |||||||||    
T  11796261 aacttaactactacactaactacaattaataataatattttagtaaataatattaattttatcattaaaatcaacacaattaaccattttctt 11796169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 29856064 - 29856136
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaat 73  Q
    |||||||||||||| |||||||||||||||||||||||||||||| || ||||| |||||||| |||||||||    
T  29856064 tcaacttaactactccactaactacaattaataagagtattttagcaagtgatattaattttatcattgaaat 29856136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 12 - 129
Target Start/End: Original strand, 843469 - 843582
Alignment:
Q  12 acttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaa 111  Q
    ||||||||||| |||||||||||||| || |||||||||||||   |||||| ||||||||| |||| ||||||||||||||||||||| ||| ||  ||    
T  843469 acttcactaac-acaattaataagagcatgttagtaaatgata---attttatcattgaaatcaacaaaattaatcattttcttaataatcgtgcacaaa 843564  T
Q  112 ccttaaacgactattatt 129  Q
    |||||||| | |||||||    
T  843565 ccttaaacaattattatt 843582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 18841509 - 18841592
Alignment:
Q  14 ttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||||||||||||||||  |||||||| ||||||||| ||||||||||||| |||| || ||||||||||||||| ||||    
T  18841509 ttcactaactacaattaataacggtattttattaaatgatattaattttaccatttaaatcaatataattaatcatttttttaa 18841592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 5282361 - 5282488
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    ||||||||| ||| ||||| || |||||||||    |||||||||||| ||| | |||||| |||| |||||| || |||||||||||||||||| |||     
T  5282361 aacttaacttcttaactaattataattaataaagaaattttagtaaattatatttattttatcattaaaattagcacaattaatcattttcttaaaaact 5282460  T
Q  103 gtacatcaaccttaaacgactattattt 130  Q
    |||||  |||||||||| ||||||||||    
T  5282461 gtacagaaaccttaaacaactattattt 5282488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 129
Target Start/End: Original strand, 41496102 - 41496225
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgta 105  Q
    ||||||||| |||||||||||||||||||   | ||||| ||||||  |||||||||||||||||||| |||| ||||||| ||||| ||||||| |||     
T  41496102 ttaactactccactaactacaattaataatgatgttttactaaatgcaactaattttaccattgaaatcaacacaattaattatttttttaataatcgtg 41496201  T
Q  106 catcaaccttaaacgactattatt 129  Q
     |  |||||||| |||||| ||||    
T  41496202 tacaaaccttaatcgactaatatt 41496225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 2 - 132
Target Start/End: Complemental strand, 3348225 - 3348088
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgat-----actaattttaccattgaaattaacataattaatcattttctta 96  Q
    |||||||| |||||||| ||||||| |||||||| || ||||| ||||| ||     ||||||||||||||  |||| |||||||||||| |||| ||||    
T  3348225 caacttaattacttcaccaactacatttaataagggtgttttaataaataatggggtactaattttaccatcaaaatcaacataattaataatttcctta 3348126  T
Q  97 ataaccgt--acatcaaccttaaacgactattatttag 132  Q
    ||||||||   |||||  ||||||||||||||||||||    
T  3348125 ataaccgtgcccatcagacttaaacgactattatttag 3348088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 4441043 - 4441129
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcatttt 92  Q
    ||||||||| ||||||||||||||||||| | ||||||||||||| ||| |||||||| |||| |||| |||| ||||||| |||||    
T  4441043 ttaactactccactaactacaattaataaaaatattttagtaaataatattaattttatcattaaaatcaacacaattaattatttt 4441129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 6615975 - 6615877
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||| ||| ||||||||| ||||||||||  | |||| ||||||| ||||||||||||||||||||| |||| ||||||| ||||  |||||||    
T  6615975 caacttaaccactccactaactaaaattaataaggatgttttggtaaatgctactaattttaccattgaaatcaacacaattaattatttatttaataa 6615877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 11904227 - 11904349
Alignment:
Q  6 ttaactacttcactaactacaattaa-taagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgt 104  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||||||| ||||||||  |||||| | || | ||||||||| ||||||||  | |||    
T  11904227 ttaactactccaccaactacaattaaataagagtattttagtaaatgatattaattttattattgaactcaatacaattaatcactttcttaaagatcgt 11904326  T
Q  105 acatcaaccttaaacgactatta 127  Q
     ||  ||| ||||||||||||||    
T  11904327 gcacaaacattaaacgactatta 11904349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 38 - 131
Target Start/End: Original strand, 41492356 - 41492449
Alignment:
Q  38 tattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgactattattta 131  Q
    ||||||||||||||  |||||||||||||||||||| | || |||||||||||||||||| || ||  ||  ||||||| ||||||||||||||    
T  41492356 tattttagtaaatgtcactaattttaccattgaaataagcacaattaatcattttcttaaaaatcgcgcacaaaccttagacgactattattta 41492449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 42803715 - 42803598
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||| ||| || ||||||||||||||||  || |||||||||||  |||||||||||| |||||||| |||| ||||||| ||||  || ||||     
T  42803715 caacttaaccactccattaactacaattaataatggtgttttagtaaatactactaattttacaattgaaatgaacacaattaattatttctttgataat 42803616  T
Q  102 cgtacatcaaccttaaac 119  Q
    ||| ||| ||||||||||    
T  42803615 cgtgcataaaccttaaac 42803598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 38161507 - 38161440
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattg 69  Q
    ||||||||||||| |||||||||| |||||||||  |||||||||||||||||  |||||||||||||    
T  38161507 caacttaactactccactaactacgattaataaggatattttagtaaatgatatgaattttaccattg 38161440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 37184157 - 37184079
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||||| |||||   ||||||||||||||||| |||||||||||||||||| |||  ||||||||||||| ||||    
T  37184157 taactacaatgaataaagatattttagtaaatgatattaattttaccattgaaatcaactcaattaatcatttttttaa 37184079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 8493931 - 8493858
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaac 77  Q
    |||||||||||  | |||||| ||||||||||||||| ||| ||||| ||||||||||||| ||||||||||||    
T  8493931 acttaactactctattaactaaaattaataagagtatattaataaatcatactaattttacgattgaaattaac 8493858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 11761393 - 11761313
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataatt 83  Q
    ||||||||||| |||||| | || |||| |||||||||||||||| ||||||||||||||||||||| |||| |||| ||||    
T  11761393 caacttaactatttcacttagtataatttataagagtattttagt-aatgatactaattttaccattaaaatcaacacaatt 11761313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 26285573 - 26285510
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttacc 65  Q
    |||||||||||||||| ||||||||||||||| | || ||||  ||||||||||||||||||||    
T  26285573 caacttaactacttcattaactacaattaatacgtgtgttttcataaatgatactaattttacc 26285510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 29570410 - 29570537
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||| | || ||||||||||||||||  || |||||| ||||  || |||||||| |||| |||| |||| ||||||||||||  |||||||     
T  29570410 caacttaactattccattaactacaattaataaaggtgttttagcaaatactaataattttaacattaaaatcaacacaattaatcatttctttaataat 29570509  T
Q  102 cgtacatcaaccttaaacgactattatt 129  Q
    ||| ||  || |||||||||||| ||||    
T  29570510 cgtgcacaaatcttaaacgactaatatt 29570537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 5731806 - 5731892
Alignment:
Q  14 ttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||| |||||||||  | ||||||||||||||||  |||||   ||| |||| |||| |||||||||||||||||||||    
T  5731806 ttcactaactacgattaataaggatgttttagtaaatgatacacattttgttattaaaatgaacacaattaatcattttcttaataa 5731892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 22848474 - 22848381
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||| || ||||||||||||||||| || ||||| |||||  || ||||||||| |||||||| |||| ||||||||  || ||||||||    
T  22848474 taactactccattaactacaattaataagggtgttttaataaatactattaattttactattgaaatcaacacaattaatcgcttccttaataa 22848381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 18890647 - 18890555
Alignment:
Q  5 cttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||||| ||  || || ||||||||| | ||||||| ||||||||||||||||||||||| |||  |||  || |||||||||||||||    
T  18890647 cttaactactccaacaattaaaattaataaaaatattttaataaatgatactaattttaccattaaaaacaactcaactaatcattttcttaa 18890555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 7580999 - 7581090
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgat----actaattttaccattgaaattaacataattaatcattttcttaataaccgt 104  Q
    |||||||| |||||| || ||| ||||||||||||||    || ||||||  |||| |||||||||| |||||||||||| |||||||||||    
T  7580999 actaactataattaacaaaagtgttttagtaaatgatgaatacaaattttgtcattaaaattaacattattaatcattttattaataaccgt 7581090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 104
Target Start/End: Original strand, 39213369 - 39213469
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaaca---taattaatcattttcttaataaccg 103  Q
    |||||||| ||||||||| ||||||||||||| ||||| |||| |||||  ||||| ||||| |||| | ||   | ||||||||||| |||||||||||    
T  39213369 taactactccactaactataattaataagagtgttttattaaaggatacatattttgccattaaaatcatcaacgttattaatcatttccttaataaccg 39213468  T
Q  104 t 104  Q
    |    
T  39213469 t 39213469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 14339337 - 14339410
Alignment:
Q  18 ctaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    ||||||||||||||||| | ||||||||||||| | | |||||||| ||| |||||||||  || |||||||||    
T  14339337 ctaactacaattaataaaaatattttagtaaataaaattaattttaacatagaaattaactcaactaatcattt 14339410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 5129328 - 5129261
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccatt 68  Q
    |||| |||||||||  | |||||||||||||||||| | || |||||||| ||| |||||||||||||    
T  5129328 tcaatttaactactctaataactacaattaataagaatgttatagtaaattatattaattttaccatt 5129261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 7330529 - 7330587
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttac 64  Q
    ||||||||| |||||| || ||||||||||||| ||||| | ||||||| |||||||||    
T  7330529 ttaactactccactaattagaattaataagagtgttttactgaatgatattaattttac 7330587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 91
Target Start/End: Complemental strand, 40616115 - 40616077
Alignment:
Q  53 tactaattttaccattgaaattaacataattaatcattt 91  Q
    ||||||||||||||||| ||| |||||||||||||||||    
T  40616115 tactaattttaccattgcaatcaacataattaatcattt 40616077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 3076658 - 3076703
Alignment:
Q  52 atactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||||||| ||||||||| |||| ||||||||||||| ||||    
T  3076658 atactaattttatcattgaaatcaacacaattaatcattttgttaa 3076703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 9637873 - 9637934
Alignment:
Q  38 tattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaata 99  Q
    ||||||||||||||| ||  |||||| |||| |||| ||||| ||||||||||| |||||||    
T  9637873 tattttagtaaatgacacatattttatcattaaaatcaacattattaatcatttccttaata 9637934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 32490525 - 32490489
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatga 52  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  32490525 cactaactactattaataagagtagtttagtaaatga 32490489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 42922894 - 42922830
Alignment:
Q  70 aaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgactattatttagag 134  Q
    |||| |||| ||||||||||||||||||||| | | ||  || ||||||||||||| ||||||||    
T  42922894 aaatcaacacaattaatcattttcttaataatcatgcacaaatcttaaacgactataatttagag 42922830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 5e-44; HSPs: 89)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 47773122 - 47772988
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||  |||| |||| ||||||| |||| |||||||||    
T  47773122 caacttaactactccactaactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacacaattaattatttccttaataac 47773023  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
     || |||||||||||||||||||||||||||||||    
T  47773022 tgtgcatcaaccttaaacgactattatttagagac 47772988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 17114462 - 17114592
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgta 105  Q
    ||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||  |||| |||| |||||||||||| ||||||||| ||     
T  17114462 ttaactactccactaactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatttccttaataactgtg 17114561  T
Q  106 catcaaccttaaacgactattatttagagac 136  Q
    |||||||||||||||||||||||||| ||||    
T  17114562 catcaaccttaaacgactattatttaaagac 17114592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 25233199 - 25233333
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||||||||||||| ||||||||  ||| ||||||||||||||||||||||||||||  ||||||||| ||||||| ||||  ||||||||    
T  25233199 caacttaactacttcactaactataattaatactagtgttttagtaaatgatactaattttaccatcaaaattaacacaattaattatttctttaataac 25233298  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
     ||||||||||||||||||| ||||||||||||||    
T  25233299 tgtacatcaaccttaaacgaatattatttagagac 25233333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 33790834 - 33790700
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| |||||||||||||||||||| || |||||| |||||| ||||||||||||||  |||| |||| |||||||||||||||||||||     
T  33790834 caacttaactactccactaactacaattaataagggtgttttagcaaatgaaactaattttaccatcaaaatcaacacaattaatcattttcttaataat 33790735  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    ||| ||| |||||||||||||||||||||||||||    
T  33790734 cgtgcataaaccttaaacgactattatttagagac 33790700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 52247532 - 52247397
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| ||||||||||||||||||||  |||||||||||||  || ||||||||||||||||||||||| |||||||||||||||||||||    
T  52247532 tcaacttaactactccactaactacaattaataaggatattttagtaaattgtattaattttaccattgaaattaacacaattaatcattttcttaataa 52247433  T
Q  101 ccgtacatcaaccttaaacgactattatttagagac 136  Q
     ||| ||  | |||||||||||||| ||||||||||    
T  52247432 tcgtgcacaatccttaaacgactataatttagagac 52247397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 11907702 - 11907568
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| || ||||||||||||||||| || ||||||||||||||||||||||||||||  |||| |||| |||||||||||| ||||||||     
T  11907702 caacttaactactccaataactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatttccttaataat 11907603  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    ||| ||| ||||||||| |||||||||||||||||    
T  11907602 cgtgcattaaccttaaatgactattatttagagac 11907568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 38405205 - 38405071
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||  |||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||| |||| |||||||||||| ||||||||     
T  38405205 caacttaactacaccactaactacaattaataagggtattttagtaaatgatattaattttaccatttaaatcaacagaattaatcatttccttaataat 38405106  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    ||| ||  |||||||||||||||| ||||||||||    
T  38405105 cgtgcacaaaccttaaacgactataatttagagac 38405071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 32884819 - 32884946
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| ||||||||||||||||||||||| ||||| |||||| |||||||| |||||||||||| |||| |||||||||||||||||||||     
T  32884819 caacttaactactccactaactacaattaataagagtgttttactaaatgctactaattctaccattgaaatcaacacaattaatcattttcttaataat 32884918  T
Q  102 cgtacatcaaccttaaacgactattatt 129  Q
    ||| ||  ||||||||||||||| ||||    
T  32884919 cgtgcacaaaccttaaacgactaatatt 32884946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 52859903 - 52859768
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| ||||||||||||||||||||  | ||||||||||||||||||||||||||||  |||| |||| |||||||||||| ||||||||    
T  52859903 tcaacttaactactccactaactacaattaataaggatgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatttccttaataa 52859804  T
Q  101 ccgtacatcaaccttaaacgactattatttagagac 136  Q
     ||| ||| | |||||| ||||||||||||||||||    
T  52859803 tcgtgcataagccttaagcgactattatttagagac 52859768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 38502585 - 38502451
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| || |||||| ||||||||| ||||||||| ||||||||||||||||||||||  |||| |||| ||||||| |||| |||||||||    
T  38502585 caacttaactactacattaactataattaataaaagtattttaataaatgatactaattttaccatcaaaatcaacacaattaattatttccttaataac 38502486  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
      | |||||||||||||||||||||||||||||||    
T  38502485 tatgcatcaaccttaaacgactattatttagagac 38502451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 49428445 - 49428311
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||| |||| |||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| |||| || ||||||||| ||||||||     
T  49428445 caacttaattactccactaactacaattaataagggtattttagtaaattatattaattttaccattgaaatcaacacaaataatcatttccttaataat 49428346  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    ||| ||  |||||||||||||||| ||||||||||    
T  49428345 cgtgcaaaaaccttaaacgactataatttagagac 49428311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 11288732 - 11288600
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| ||| ||||||||||||||||| ||||||||||||||||| ||||||| |||||||||| || | |||||||||||||||||||||     
T  11288732 caacttaactactccaccaactacaattaataaga-tattttagtaaatgatattaattttgccattgaaatcaatacaattaatcattttcttaataat 11288634  T
Q  102 cgtacatcaaccttaaacgactattatttagaga 135  Q
    ||||||| |||||||||||| ||| ||| |||||    
T  11288633 cgtacataaaccttaaacgattataattcagaga 11288600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 3689581 - 3689709
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    |||||||| |||  |||||||| ||||||||||||| ||||||||||||||||||||||||||||  |||| || | ||||||||||||  |||||||||    
T  3689581 aacttaacaactcaactaactataattaataagagtgttttagtaaatgatactaattttaccatcaaaatcaatacaattaatcatttctttaataacc 3689680  T
Q  103 gtacatcaaccttaaacgactattattta 131  Q
    |||||| ||||||||||||||||||||||    
T  3689681 gtacataaaccttaaacgactattattta 3689709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 47464468 - 47464341
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| ||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||| |||||||||||| ||||||||     
T  47464468 caacttaactactccaccaactacaattaataagagttttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataat 47464369  T
Q  102 cgtacatcaaccttaaacgactattatt 129  Q
    ||| |   ||||||||||||||| ||||    
T  47464368 cgtgctcaaaccttaaacgactaatatt 47464341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 43237261 - 43237388
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||||||||||||| |||||||||   | |||||||||||  ||||||||||||||||||||| |||| |||||||||||| ||||||||     
T  43237261 caacttaactacttcactaactataattaataatgattttttagtaaatattactaattttaccattgaaataaacacaattaatcatttccttaataat 43237360  T
Q  102 cgtacatcaaccttaaacgactattatt 129  Q
    ||| ||| ||||||||||||||| ||||    
T  43237361 cgtgcataaaccttaaacgactaatatt 43237388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 35311326 - 35311208
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||| |||| ||||||||||||||||||||||| || |||||||||  | |||||||||||||||||||||||||||||||||||| ||||||||     
T  35311326 caacttaattactccactaactacaattaataagagtgttctagtaaatgcaattaattttaccattgaaattaacataattaatcatttccttaataat 35311227  T
Q  102 cgtacatcaaccttaaacg 120  Q
    ||| ||  |||||||||||    
T  35311226 cgtgcacaaaccttaaacg 35311208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 34360672 - 34360792
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| || | ||||||||||||  |||||||    
T  34360672 tcaacttaactactccactaactacaattaataagagtgttttagtaaatgctactaattttaccattgaaatcaatacaattaatcatttctttaataa 34360771  T
Q  101 ccgtacatcaaccttaaacga 121  Q
     ||| ||  ||| ||||||||    
T  34360772 tcgtgcacaaactttaaacga 34360792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 49176037 - 49175909
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| | ||||||||||||||||||  |||||||||||||||||||||||||| |||||||||   || |||||||||||||||||| ||     
T  49176037 caacttaactactccgctaactacaattaataaggttattttagtaaatgatactaattttatcattgaaatctccacaattaatcattttcttaaaaat 49175938  T
Q  102 cgtacatcaaccttaaacgactattattt 130  Q
    | | ||  |||||||||||||||||||||    
T  49175937 catgcacaaaccttaaacgactattattt 49175909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 54506807 - 54506935
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    |||||||||||| |||||||||||||| ||||   ||||||| ||||||||| |||||||||||||||||| |||| | |||||||||||||||||||||    
T  54506807 aacttaactactccactaactacaattgataatgatattttaataaatgatattaattttaccattgaaatcaacacagttaatcattttcttaataacc 54506906  T
Q  103 gtacatcaaccttaaacgactattattta 131  Q
    ||| |  || |||||||||||||| ||||    
T  54506907 gtaaacaaatcttaaacgactatttttta 54506935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 7061768 - 7061630
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||| || | |||||||||||||||||||   |||| ||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||    
T  7061768 tcaacttaattaatccactaactacaattaataaagatattatagtaaatgatactaattttaccattgaaatcaacacaattaatcatttccttaataa 7061669  T
Q  101 ccgtacatcaaccttaaacgactattatttagagacaga 139  Q
     |||  |  ||||||||||||||| ||||  ||||||||    
T  7061668 tcgtgtacaaaccttaaacgactaatattgtgagacaga 7061630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 2066808 - 2066936
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    |||||||||||  ||||||||| |||||||||| || ||||| ||||| ||||||| ||||||||  |||| |||| |||||||||||| |||||||| |    
T  2066808 aacttaactaccccactaactaaaattaataagggtgttttaataaataatactaactttaccatcaaaatcaacacaattaatcatttccttaataatc 2066907  T
Q  103 gtacatcaaccttaaacgactattattta 131  Q
    || ||| ||||||||||||||||||||||    
T  2066908 gtgcataaaccttaaacgactattattta 2066936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 8 - 136
Target Start/End: Complemental strand, 5841524 - 5841396
Alignment:
Q  8 aactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtaca 107  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||| |||  ||| |||||||| |||||||   || ||    
T  5841524 aactactccactaactacaattaataagggtattttagtaaatgatattaattttaccattaaaatcaacgcaatcaatcatttccttaatagttgtgca 5841425  T
Q  108 tcaaccttaaacgactattatttagagac 136  Q
      |||||||||||||||| ||||||||||    
T  5841424 caaaccttaaacgactataatttagagac 5841396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 28500984 - 28500860
Alignment:
Q  12 acttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaa 111  Q
    |||| ||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||| |||| ||| |||||||| |||||||| ||| ||  ||    
T  28500984 acttaactaactgcaattaataagggtattttagtaaatgatattaattttaccattgaaatcaacacaatcaatcatttccttaataatcgtgcacaaa 28500885  T
Q  112 ccttaaacgactattatttagagac 136  Q
    | ||||||| |||| ||||||||||    
T  28500884 cattaaacggctataatttagagac 28500860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 2653442 - 2653570
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgta 105  Q
    ||||||||| |  |||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||| ||||||||||||  ||||||| | |     
T  2653442 ttaactactcctttaactacaattaataagagtattttaataaatgatactaattttacaattgaaatcaacacaattaatcattt--ttaataatcatg 2653539  T
Q  106 catcaaccttaaacgactattatttagagac 136  Q
    ||  || ||||||| ||||||||||||||||    
T  2653540 cacaaatcttaaacaactattatttagagac 2653570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 17237399 - 17237272
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| ||||||||||||||||||||  | |||||||||||| ||||||||||||||||| ||| |||| ||||||| |||||||||||||     
T  17237399 caacttaactactccactaactacaattaataaggttgttttagtaaatgttactaattttaccattgcaatcaacacaattaattattttcttaataat 17237300  T
Q  102 cgtacatcaaccttaaacgactattatt 129  Q
    | | ||  ||||||||| ||||| ||||    
T  17237299 catgcacaaaccttaaatgactagtatt 17237272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 36985819 - 36985938
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaacctta 116  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||| |||||||||||| || || || |||| |  || ||||    
T  36985819 actaactacaattaatacgggtattttagtaaatgatactaattttaccattgaaatcaacacaattaatcatttcctgaaaaatcgtataaaaatctta 36985918  T
Q  117 aacgactattatttagagac 136  Q
    ||||| |||||||| |||||    
T  36985919 aacgagtattattttgagac 36985938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 35380436 - 35380338
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||| ||| |||||||||||||||||||   | |||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||    
T  35380436 caacttaaccactccactaactacaattaataatgatgttttagtaaatgctactaattttaccattaaaatcaacataattaatcattttcttaataa 35380338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 42517729 - 42517643
Alignment:
Q  14 ttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||| |||||||||| |||||||||||||||||  |||||||||||||||||| |||| |||||||||||||||||||||    
T  42517729 ttcactaactataattaataagggtattttagtaaatgatcttaattttaccattgaaatcaacacaattaatcattttcttaataa 42517643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 138
Target Start/End: Original strand, 51625139 - 51625237
Alignment:
Q  40 ttttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgactattatttagagacag 138  Q
    |||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||| ||| ||  ||| |||||||||||| ||||||||||||    
T  51625139 ttttagtaaatgttactaattttaccattgaaatcaacacaattaatcattttcttaataatcgtgcacaaactttaaacgactataatttagagacag 51625237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 4 - 133
Target Start/End: Complemental strand, 42617004 - 42616875
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccg 103  Q
    ||||||||||| |||| |||||||||||||| | ||||||||||||||||| |||||||||||||||||| |||| | ||||||||||  ||||||| |     
T  42617004 acttaactactccacttactacaattaataaaaatattttagtaaatgatattaattttaccattgaaatcaacacagttaatcatttctttaataatca 42616905  T
Q  104 tacatcaaccttaaacgactattatttaga 133  Q
    | ||  || ||||||||||||| |||||||    
T  42616904 tgcacaaaacttaaacgactataatttaga 42616875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 53412126 - 53412254
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||| | ||| ||||| ||||||||| | |||||||||||||||||||||||||||||||||||| || | |||||||| ||||||||| ||     
T  53412126 caacttaactattccacaaactataattaataaaaatattttagtaaatgatactaattttaccattgaaatcaataaaattaatcgttttcttaaaaat 53412225  T
Q  102 cgtacatcaaccttaaacgactattattt 130  Q
    ||||| | || | ||||| ||||||||||    
T  53412226 cgtacgtaaatcgtaaacaactattattt 53412254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 6609779 - 6609914
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| || ||| ||||||||||||   | |||| |||||||||||||||||||||||  |||| |||| |||||||||||| ||||||||     
T  6609779 caacttaactactccaataattacaattaataaagatgtttttgtaaatgatactaattttaccatcaaaatcaacacaattaatcatttccttaataat 6609878  T
Q  102 cgtacatcaaccttaaacg-actattatttagagac 136  Q
    ||| ||| ||| ||||||| ||||||||||||||||    
T  6609879 cgtgcataaactttaaacgaactattatttagagac 6609914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 16821435 - 16821312
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||| |||| ||||||||| ||||||||||  |||| ||||||||||||||||||||| ||||||||| |||| |||||||||||   |||||||    
T  16821435 tcaacttaaatactccactaactataattaataaggatattatagtaaatgatactaattttatcattgaaatcaacacaattaatcattgcattaataa 16821336  T
Q  101 ccgtacatcaaccttaaacgacta 124  Q
     ||| ||  |||||||||||||||    
T  16821335 tcgtgcacaaaccttaaacgacta 16821312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 22130061 - 22130192
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaac----ataattaatcattttcttaa 97  Q
    |||||||| |||| ||||||||||||||||||||  | |||| |||||||||||||||| |||||||||||| |||    | |||||||||||| |||||    
T  22130061 caacttaattactccactaactacaattaataaggatgtttttgtaaatgatactaattataccattgaaatcaacacatacaattaatcatttccttaa 22130160  T
Q  98 taaccgtacatcaaccttaaacgactattatt 129  Q
    ||||||| ||  ||||||||||||||| ||||    
T  22130161 taaccgtgcacaaaccttaaacgactaatatt 22130192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 53346778 - 53346904
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    |||||||||||| ||||||||| |||||||||| || |||||||||||| || ||||||||||||||||| ||||| ||| ||| ||||||||||||| |    
T  53346778 aacttaactactccactaactaaaattaataagggtgttttagtaaatgctattaattttaccattgaaactaacacaatcaattattttcttaataatc 53346877  T
Q  103 gtacatcaaccttaaacgactattatt 129  Q
    || ||  ||  ||||||||||| ||||    
T  53346878 gtgcacaaattttaaacgactaatatt 53346904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 46396969 - 46396868
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaa 118  Q
    |||||||||||||||||||| |||||||||||| || |||||||||||||||||| |||| |||||||||||| |||||| | ||| ||  |||||||||    
T  46396969 taactacaattaataagagtgttttagtaaatgctattaattttaccattgaaatcaacacaattaatcatttacttaatgatcgtgcacaaaccttaaa 46396870  T
Q  119 cg 120  Q
    ||    
T  46396869 cg 46396868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 2942748 - 2942621
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||| ||| |||||||||||||||||||| || |||||||||||| ||||||||||| ||| ||||| |||| ||||||||||||  |||||||    
T  2942748 tcaacttaaccactccactaactacaattaataag-gtgttttagtaaatgctactaattttatcatcgaaatcaacacaattaatcatttctttaataa 2942650  T
Q  101 ccgtacatcaaccttaaacgactattatt 129  Q
     | || |  ||||||||||||||| ||||    
T  2942649 tcttatacaaaccttaaacgactaatatt 2942621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 30682300 - 30682176
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||| |||||||||  ||||||||||| |||||||  |||| |||||||||||| ||||||||||| | ||||||||| ||||||||||||| ||||||     
T  30682300 tcaaattaactactctactaactacaactaataaggatattatagtaaatgatattaattttaccaataaaattaacacaattaatcatttttttaatag 30682201  T
Q  101 ccgtacatcaaccttaaacgactat 125  Q
     ||| ||  ||||||||||||||||    
T  30682200 tcgtgcaaaaaccttaaacgactat 30682176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 19265825 - 19265928
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| ||||||||| ||||||||||  ||||||| ||||| | | ||||||||  |||||||| || |||||||||||||||||||||||    
T  19265825 tcaacttaactactccactaactataattaataaggttattttaataaataacattaattttattattgaaataaatataattaatcattttcttaataa 19265924  T
Q  101 ccgt 104  Q
    ||||    
T  19265925 ccgt 19265928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 6643763 - 6643665
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||   |||||||||||||||||||   | |||||||||||| ||||||||||||||||||||| |||| |||||||||||| ||||||||    
T  6643763 caacttaactataccactaactacaattaataaagatgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataa 6643665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 40122956 - 40122830
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    ||||||||| || ||||||||||||| |||||| || |||||||||||| ||||||||||| |||| |||| |||  |||||||||||| |||||||| |    
T  40122956 aacttaactgctccactaactacaatcaataagggtgttttagtaaatgctactaattttaacattaaaatcaacgcaattaatcatttccttaataatc 40122857  T
Q  103 gtacatcaaccttaaacgactattatt 129  Q
    || ||  || |||||||||||| ||||    
T  40122856 gtgcacaaagcttaaacgactaatatt 40122830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 50264184 - 50264102
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataatt 83  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||| |||| ||||    
T  50264184 tcaacttaaatatttcactaactacaattaataagagtattttagtaaatgatgttaattttaacattgaaatcaacacaatt 50264102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 29575143 - 29575220
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttctta 96  Q
    ||||||||||||| |||||||||||| |||||| || |||||||| |||| |||||||||||||||||||||||||||    
T  29575143 taactacaattaacaagagtattttaataaatgttattaattttatcatttaaattaacataattaatcattttctta 29575220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 461975 - 462071
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||||||||| | |||| |||||||||||||  ||||||||||||| ||| || ||||||||||||||| || | ||||||||||||||||||    
T  461975 tcaacttaactactccgctaattacaattaataaggatattttagtaaataatattacttttaccattgaaatcaatacaattaatcattttcttaa 462071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 27880323 - 27880208
Alignment:
Q  23 tacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgac 122  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||| || |||||||||  |||| || | || |  |||||||||||||    
T  27880323 tacaattgataagagtattctagtaaatgatactaattttaccattgaaatcaacacaa-taatcatttatttaaaaatcatatacaaaccttaaacgac 27880225  T
Q  123 tattatttagagacaga 139  Q
    |||||||| || |||||    
T  27880224 tattattttgaaacaga 27880208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 44536298 - 44536182
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    |||||| ||||| |||||||||||||||||||| || ||||| |||||  | |||||||||||||| |||| |||| |||||||||||| |||||||| |    
T  44536298 aacttagctactccactaactacaattaataagggtgttttaataaatcctgctaattttaccattaaaatcaacacaattaatcatttccttaataatc 44536199  T
Q  103 gtacatcaaccttaaac 119  Q
    || ||| ||| ||||||    
T  44536198 gtgcataaactttaaac 44536182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 26147718 - 26147635
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaa 85  Q
    |||||||| |||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||  |||| |||| ||||||    
T  26147718 caacttaattactccactaactacaattaataagaatgttttagtaaatgatactaattttaccatcaaaatcaacacaattaa 26147635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 38663550 - 38663424
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||||||||| ||||||||| |||||||| ||| |||||||||||| ||||||||||||||||||||  |||  |||||| | ||||  ||||||     
T  38663550 caacttaactactttactaactacgattaataaaagtgttttagtaaatgctactaattttaccattgaaaacaacggaattaaccgtttttgtaataat 38663451  T
Q  102 cgtacatcaaccttaaacgactattatt 129  Q
    ||| ||  ||||||||||||||| ||||    
T  38663450 cgttca-aaaccttaaacgactaatatt 38663424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 21240807 - 21240709
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||  |||||||||||||||||||  | | ||||||||||||||||||||||||||  |||| |||| | |||||||||| ||||||||    
T  21240807 caacttaactactcaactaactacaattaataaggatgtgttagtaaatgatactaattttaccatcaaaatcaacacagttaatcatttccttaataa 21240709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 139
Target Start/End: Complemental strand, 8175659 - 8175546
Alignment:
Q  26 aattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgactat 125  Q
    |||||| |||||||||||| ||||||||| |||||||||||||||||| |||| ||||| ||||||| ||||||| | | ||  | || ||||| |||||    
T  8175659 aattaacaagagtattttaataaatgatattaattttaccattgaaatcaacacaattattcatttttttaataatcatgcacaagccataaacaactat 8175560  T
Q  126 tatttagagacaga 139  Q
    ||||| ||||||||    
T  8175559 tattttgagacaga 8175546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 30192238 - 30192318
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||||||||||||||| |||||||| |||||| | ||||||||  |||||||| |||| ||||||||||||||||||    
T  30192238 actaactacaattaataagaatattttagcaaatgacattaattttataattgaaatcaacacaattaatcattttcttaa 30192318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 32470034 - 32469958
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttctt 95  Q
    |||||||| ||||||||| | ||||| ||||||||||||||||||||||| |||| |||| ||||||||||||||||    
T  32470034 taactacagttaataagaatgttttaataaatgatactaattttaccattaaaatcaacacaattaatcattttctt 32469958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 48914250 - 48914118
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgat-----actaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    ||||||| ||||||||||||||||| |||||||  |||||||||| |||||     |||||||||||||||||||| |||| ||||||| |||| |||||    
T  48914250 aacttaattacttcactaactacaaataataaggatattttagtatatgatggagtactaattttaccattgaaatgaacacaattaattatttccttaa 48914151  T
Q  98 taaccgtacatcaaccttaaacgactattattt 130  Q
     ||| || ||| |||||||| ||  ||||||||    
T  48914150 aaactgtgcataaaccttaaccgcatattattt 48914118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 47359053 - 47358958
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttctta 96  Q
    ||||||||| |||| |||| |||||||||||||| |||||||||| |||| || ||||||||| ||||||||| |||| ||| ||| |||||||||    
T  47359053 tcaacttaattactccactgactacaattaataaaagtattttagaaaattattctaattttatcattgaaatcaacacaatcaataattttctta 47358958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 4972595 - 4972705
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaa 118  Q
    |||||||||||||||||||| ||||||||||||  || |||||| | |||||||| |||| ||||||||||||  ||||||| ||| ||  || ||||||    
T  4972595 taactacaattaataagagtgttttagtaaatgtcaccaatttttcaattgaaatcaacacaattaatcatttcattaataatcgtgcacaaatcttaaa 4972694  T
Q  119 cgactattatt 129  Q
    |||||| ||||    
T  4972695 cgactaatatt 4972705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 11024988 - 11024897
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaat 98  Q
    ||||||||||||||| || ||||||||| | ||||||||||||||| ||  ||| ||||||| |||| ||||  ||||||||||||||||||    
T  11024988 taactacttcactaattataattaataaaaatattttagtaaatgaaacatattataccattaaaatcaacactattaatcattttcttaat 11024897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 18741577 - 18741494
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaa 85  Q
    ||||||||||||| || ||||||||||||||||   ||||||| ||||||| |||||||||||| ||||||| || ||||||||    
T  18741577 caacttaactactccattaactacaattaataaagatattttaataaatgacactaattttaccgttgaaatcaatataattaa 18741494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 39157973 - 39157878
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaatt-aacataattaatcattttcttaataa 100  Q
    |||||||||  |||| ||| |||||||||| |||||||||||||||| || |||||||||||  ||||| |||| || ||||||||||||||||||    
T  39157973 ttaactactctactagctataattaataagtgtattttagtaaatgaaacaaattttaccatcaaaattaaacacaactaatcattttcttaataa 39157878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 18532201 - 18532331
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgta 105  Q
    ||||| ||| |||| |||| ||||||||| | ||||||| ||||| ||||||||||||||||| ||||| | ||||||||||||||   ||| || | |     
T  18532201 ttaaccactccacttactataattaataaaactattttaataaatcatactaattttaccattaaaatttatataattaatcatttatgtaaaaatcatg 18532300  T
Q  106 catcaaccttaaacgactattatttagagac 136  Q
    ||  |||||||||| |||||||||| |||||    
T  18532301 cacaaaccttaaacaactattattttgagac 18532331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 39397379 - 39397457
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    ||||||||||||||| | | |||||||||||||| | ||| ||||||| |||||| ||||||||||||||||| |||||    
T  39397379 taactacaattaatatggggattttagtaaatgacattaaatttaccaatgaaatcaacataattaatcatttccttaa 39397457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 49746979 - 49747069
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcatttt 92  Q
    |||||||||||||  |||||||| ||||||| |  ||||||||||||||  ||||||||||| ||||||||| |||| ||||||| |||||    
T  49746979 caacttaactactcaactaactataattaatgaaggtattttagtaaatactactaattttatcattgaaatcaacacaattaattatttt 49747069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 35998829 - 35998934
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| ||  |||||||||||||||   ||||||| |||||| ||||||||||||  || |||| ||||||| |||| ||||| |||||||     
T  35998829 caacttaactactccatcaactacaattaataatgatattttaataaatgttactaattttactgttaaaatcaacataaataataatttttttaataat 35998928  T
Q  102 cgtaca 107  Q
    ||||||    
T  35998929 cgtaca 35998934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 52869107 - 52869212
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaa 118  Q
    ||||||||||||||||  |||||||| |||| |||| |||| |||| |||||||| |||| ||||||| |||| ||||||||  || ||  |||||||||    
T  52869107 taactacaattaataaaggtattttaataaacgatattaatcttactattgaaatcaacacaattaattatttccttaataattgtgcacaaaccttaaa 52869206  T
Q  119 cgacta 124  Q
    ||||||    
T  52869207 cgacta 52869212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 10215250 - 10215168
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||| ||||||||||||||||||| | ||||| ||  ||||||||||| ||||||| |  |||||||||||| ||||||||    
T  10215250 taactataattaataagagtattttaattaatgaaacatattttaccattaaaattaaaaatattaatcatttttttaataac 10215168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 3098757 - 3098826
Alignment:
Q  23 tacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcatttt 92  Q
    ||||||||||||   |||||||||||||||||  ||||||| ||||||||| || |||||||||||||||    
T  3098757 tacaattaataaagatattttagtaaatgatatcaattttatcattgaaatcaatataattaatcatttt 3098826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 20612272 - 20612179
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||||||||| || |||||||||||||  || ||||||||||| ||||||| |||| || |||||| |||  || |||||||||| ||||    
T  20612272 acttaactacttcattatctacaattaataatggtgttttagtaaattatactaactttagcaatgaaatcaactcaactaatcatttttttaa 20612179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 21325224 - 21325171
Alignment:
Q  45 gtaaatgatactaattttaccattgaaattaacataattaatcattttcttaat 98  Q
    ||||||||||||||||||||||||||||| |||| |||| ||||||| ||||||    
T  21325224 gtaaatgatactaattttaccattgaaataaacacaatttatcatttccttaat 21325171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 7986993 - 7987068
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaaca 78  Q
    ||||||||||||  |||||| | ||||||||| | |||||||||| ||||||||||||||| |||| |||| ||||    
T  7986993 aacttaactactctactaacaataattaataataatattttagtagatgatactaattttatcattaaaatcaaca 7987068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 35251942 - 35252000
Alignment:
Q  37 gtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttctt 95  Q
    |||||||||||||||||| |||||||| ||||||||| | || ||||||| ||||||||    
T  35251942 gtattttagtaaatgatattaattttatcattgaaataaccacaattaattattttctt 35252000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 16506332 - 16506248
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    |||| |||| || ||||||||||||||||  || |||||||||||| |||| |||  | |||||||||||||||||||||| ||||    
T  16506332 ttaattactccattaactacaattaataaatgtgttttagtaaatgttact-attgcatcattgaaattaacataattaataattt 16506248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 41711523 - 41711470
Alignment:
Q  38 tattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    |||||||  |||||||| ||||||||||||| |||| |||||||||||||||||    
T  41711523 tattttaaaaaatgatattaattttaccattaaaatcaacataattaatcattt 41711470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 43902269 - 43902360
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatacta---attttaccattgaaattaacataattaatcatt 90  Q
    |||||||| |||| |||||||||  |||||||||| ||||||| ||||| ||| ||   |||||| |||| |||| ||||||||||||||||    
T  43902269 caacttaattactccactaactatgattaataagaatattttaataaataataatattaattttatcattaaaatcaacataattaatcatt 43902360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 17512424 - 17512352
Alignment:
Q  20 aactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcatttt 92  Q
    |||||||||||||||  |||||||||||||| ||| |||||||||| || |||| |||  || ||||||||||    
T  17512424 aactacaattaataatggtattttagtaaattatattaattttacctttaaaatcaactcaactaatcatttt 17512352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 130
Target Start/End: Complemental strand, 25141937 - 25141889
Alignment:
Q  82 ttaatcattttcttaataaccgtacatcaaccttaaacgactattattt 130  Q
    |||||||||||||||| || |||| || |||||||||||||||||||||    
T  25141937 ttaatcattttcttaaaaatcgtatataaaccttaaacgactattattt 25141889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 29295253 - 29295296
Alignment:
Q  23 tacaattaataagagtattttagtaaatgatactaattttaccat 67  Q
    |||||||||||||| | ||||||||||||||||||||||||||||    
T  29295253 tacaattaataaga-tgttttagtaaatgatactaattttaccat 29295296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 37868688 - 37868640
Alignment:
Q  15 tcactaactacaattaataagagtattttagtaaatgatactaatttta 63  Q
    ||||||| |||||||||||| | ||||||||||||||||| ||||||||    
T  37868688 tcactaattacaattaataaaaatattttagtaaatgatattaatttta 37868640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 101
Target Start/End: Complemental strand, 23915528 - 23915434
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||| ||||||||| |||||||||   | ||||||||||| | ||  ||||||||||| |||| ||||  | ||||||||| |||||||||    
T  23915528 taactactccactaactataattaataatgatgttttagtaaattaaacatattttaccattaaaatcaacactactaatcatttccttaataac 23915434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 31370358 - 31370312
Alignment:
Q  52 atactaattttaccattgaaattaacataattaatcattttcttaat 98  Q
    |||||||||||||||  ||||| |||||||||||||||||| |||||    
T  31370358 atactaattttaccaacgaaatcaacataattaatcatttttttaat 31370312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 34321758 - 34321716
Alignment:
Q  58 attttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||| |||| |||| |||||||||||||||||||||    
T  34321758 attttaccattaaaatcaacacaattaatcattttcttaataa 34321716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 91
Target Start/End: Complemental strand, 49579281 - 49579192
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccatt-gaaattaacataattaatcattt 91  Q
    ||||||||| | |||| |||||||||||||||| ||| ||||||| ||| ||| |||||||| ||||  |||| |||| ||||||||||||    
T  49579281 caacttaacaatttcaataactacaattaataaaagtgttttagt-aataataataattttatcattaaaaatcaacacaattaatcattt 49579192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 12567275 - 12567214
Alignment:
Q  12 acttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaat 73  Q
    |||||| |||||||||| |||| || | ||||| ||||||||| ||||||||||||| ||||    
T  12567275 acttcattaactacaatcaatatgactgttttattaaatgatattaattttaccattaaaat 12567214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 21761095 - 21761010
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcatttt 92  Q
    ||||||| ||| |||||| |||| |||| ||||||||| ||||||| | | ||||||||||| ||||||  || | ||||||||||    
T  21761095 taactacatcattaactataatttataaaagtattttaataaatgaaattcattttaccattaaaattagtattactaatcatttt 21761010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 50263953 - 50263904
Alignment:
Q  84 aatcattttcttaataaccgtacatcaaccttaaacgactattatttaga 133  Q
    ||||||||||||||||| ||| ||  |||||||||||||||| |||||||    
T  50263953 aatcattttcttaataatcgtgcacaaaccttaaacgactataatttaga 50263904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 2400798 - 2400890
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttctta 96  Q
    ||||||||||| ||| ||||||||| ||| || || ||||||||||| ||  ||||| |||||||  |||||| | || | ||||||||||||    
T  2400798 acttaactactccacaaactacaatcaatgagggtgttttagtaaataatgttaattgtaccattataattaatacaactgatcattttctta 2400890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 5618582 - 5618658
Alignment:
Q  24 acaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||||  ||||||| ||||| ||  ||||||||||||| |||| |||| || | |||||||| |||||||    
T  5618582 acaattaataaggatattttaataaataattttaattttaccattaaaatcaacacaactcatcatttttttaataa 5618658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 16411471 - 16411435
Alignment:
Q  26 aattaataagagtattttagtaaatgatactaatttt 62  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  16411471 aattaataagagtattttaataaatgataccaatttt 16411435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 25142482 - 25142430
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgata 54  Q
    |||||||||||| ||||||||| |||| ||||||  |||||||||| ||||||    
T  25142482 caacttaactacatcactaactgcaatcaataaggatattttagtacatgata 25142430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 43373697 - 43373653
Alignment:
Q  59 ttttaccattgaaattaacataattaatcattttcttaataaccg 103  Q
    |||||||||| |||| ||||| |||||||||||| ||||||||||    
T  43373697 ttttaccattaaaatcaacattattaatcattttattaataaccg 43373653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 91
Target Start/End: Complemental strand, 45789193 - 45789157
Alignment:
Q  55 ctaattttaccattgaaattaacataattaatcattt 91  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  45789193 ctaattttatcattgaaattaatataattaatcattt 45789157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 2e-43; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 6801949 - 6802082
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| |||||||||||||||||||| |  ||||||||||||||| ||||||||||||  |||| |||||||||||||||||||||||||||    
T  6801949 caacttaactactccactaactacaattaataagggcgttttagtaaatgatattaattttaccatcaaaatcaacataattaatcattttcttaataac 6802048  T
Q  102 cgtacatcaaccttaaacgactattatttagaga 135  Q
    | | |||||| |||||||||||||||||||||||    
T  6802049 catgcatcaatcttaaacgactattatttagaga 6802082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 15058135 - 15058272
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||     
T  15058135 caacttaaatacttcactaactacaattaataagggtattttagtaaatgccactaattttaccattgaaattaacttaattaatcattttcttaataat 15058234  T
Q  102 cgtacatcaaccttaaacgactattatttagagacaga 139  Q
    ||| ||  ||||||||||||||| ||||  ||||||||    
T  15058235 cgtgcacaaaccttaaacgactaatattgcgagacaga 15058272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 11656042 - 11655908
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||| |||||| |||||||||||||||||||| || ||||||||||||| ||||||||||||||  |||| |||| ||||||||||||||||||||||    
T  11656042 caactttactactccactaactacaattaataagggtgttttagtaaatgacactaattttaccatcaaaatcaacacaattaatcattttcttaataac 11655943  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    ||| ||| |||||||||||||| ||||||||||||    
T  11655942 cgtgcataaaccttaaacgactcttatttagagac 11655908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 1956067 - 1955941
Alignment:
Q  10 ctacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatc 109  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || | |||||||| |||||||||| || ||  ||     
T  1956067 ctacttcactaactacaattaataagagtatattagtaaatgatactaattttaccattgaaatcaatacaattaatctttttcttaattactgtgtata 1955968  T
Q  110 aaccttaaacgactattatttagagac 136  Q
    ||||||||||||||||||||| |||||    
T  1955967 aaccttaaacgactattattttgagac 1955941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 3291864 - 3291730
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||| |||||||| |||||||| ||||  | | |||||||||||| ||||||||     
T  3291864 caacttaactacttcactaactacaattaataaaggtattttagtaaataatactaatattaccattaaaatcgatacaattaatcatttccttaataat 3291765  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    ||| ||  |||||||||||||||||||||||||||    
T  3291764 cgtgcaaaaaccttaaacgactattatttagagac 3291730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 13087548 - 13087682
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||| |||||||||||||| ||||||||||  | ||||||||||||||| |||||||||||||||||| |||| ||||||||| |||||||||||     
T  13087548 caacttaattacttcactaactataattaataaggatgttttagtaaatgatattaattttaccattgaaatcaacacaattaatcactttcttaataat 13087647  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    |||  || |||||||||||||| ||||||||||||    
T  13087648 cgtttatgaaccttaaacgacttttatttagagac 13087682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 32440741 - 32440607
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||||||||  ||||| ||||||||||||| || ||||||||||| ||||||||||||||||  |||| |||| |||||||||||| || ||||||    
T  32440741 caacttaactactctactaattacaattaataagggtgttttagtaaataatactaattttaccatcaaaatcaacacaattaatcatttcctaaataac 32440642  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    ||| ||| || ||||||||||||||||||||||||    
T  32440641 cgtgcataaatcttaaacgactattatttagagac 32440607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 1063698 - 1063562
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    |||||||||||| ||||||||||||||| | ||||||||||||||||| |||||||||||| ||||||||| |||| |||||||||||||||||| ||      
T  1063698 aacttaactactccactaactacaattactcagagtattttagtaaataatactaattttatcattgaaatcaacacaattaatcattttcttaaaaatt 1063599  T
Q  103 gtacatcaaccttaaacgactattatttagagacaga 139  Q
     ||||| ||| ||||||||||| ||||| || |||||    
T  1063598 atacataaactttaaacgactactattttgatacaga 1063562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 1781820 - 1781939
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||| ||| |||||||||||||||||||| || |||||||||||| |||||||||||||||||| || ||||||||||||||||||||||| ||    
T  1781820 tcaacttaac-actccactaactacaattaataagggtgttttagtaaatgctactaattttaccattgagatcaacataattaatcattttcttaacaa 1781918  T
Q  101 ccgtacatcaaccttaaacga 121  Q
     ||| ||| ||||||||||||    
T  1781919 tcgtgcataaaccttaaacga 1781939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 30716918 - 30717050
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||| |||||| |||||||||||||||||||| || ||| ||||||||||||||||||||||||  || | || | |||||||||||| |||||||||    
T  30716918 caactttactactccactaactacaattaataagggtgtttaagtaaatgatactaattttaccatcaaagtcaataaaattaatcatttccttaataac 30717017  T
Q  102 cgtacatcaaccttaaacgactattatttagag 134  Q
     || |||||| ||||||||||||||||||||||    
T  30717018 tgtgcatcaatcttaaacgactattatttagag 30717050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 29363324 - 29363458
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||| | | ||||||||||||||||||  | |||||||||||||||||| |||||||||  |||| |||| |||||||||||||||||||||     
T  29363324 caacttaactaatccgctaactacaattaataaggatgttttagtaaatgatactagttttaccatcaaaatcaacacaattaatcattttcttaataat 29363423  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
     || ||| |||||||||||||||||||||| ||||    
T  29363424 tgtgcataaaccttaaacgactattatttaaagac 29363458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 31894306 - 31894187
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||||||||||||||||||||||||||||     |||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||     
T  31894306 caacttaactacttcactaactacaattaataatgacgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcattttcttaataat 31894207  T
Q  102 cgtacatcaaccttaaacga 121  Q
    | ||||  || |||||||||    
T  31894206 catacacaaatcttaaacga 31894187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 21010212 - 21010326
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaa 118  Q
    ||||||||||| ||||| || ||||||||||||||||||||||| ||||  ||||||||| |||||||||||||||||||||  || ||| |||||||||    
T  21010212 taactacaatttataagggtgttttagtaaatgatactaatttttccatcaaaattaacacaattaatcattttcttaataattgtgcataaaccttaaa 21010311  T
Q  119 cgactattatttaga 133  Q
    | |||||||||||||    
T  21010312 caactattatttaga 21010326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 13909443 - 13909540
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||| |||| |||||||||||||||||||| |||||||||||||||  |||||||||||||||||||| |||| | |||||||||| ||||||||    
T  13909443 aacttaattactccactaactacaattaataagggtattttagtaaatgtcactaattttaccattgaaatcaacacatttaatcatttccttaataa 13909540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 23142688 - 23142801
Alignment:
Q  5 cttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgt 104  Q
    |||||||||| ||||| |||||||||||||| || ||||||||||||  |||| ||||||||||||||| |||| ||||||||||||||||||||| |||    
T  23142688 cttaactactccactacctacaattaataagggtgttttagtaaatgccactatttttaccattgaaatcaacacaattaatcattttcttaataatcgt 23142787  T
Q  105 acatcaaccttaaa 118  Q
      || |||||||||    
T  23142788 ggataaaccttaaa 23142801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 5302369 - 5302484
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| || |||||||||||||||||  | |||| |||||| ||| ||||||||||||  |||| |||| | ||||||||||||||||||||    
T  5302369 caacttaactactccattaactacaattaataaggatgttttggtaaattatattaattttaccatcaaaatcaacacatttaatcattttcttaataac 5302468  T
Q  102 cgtacatcaaccttaa 117  Q
    ||| ||||||||||||    
T  5302469 cgtgcatcaaccttaa 5302484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 24983545 - 24983450
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    ||||||||||||| |||||||||||||||||||| || ||||||||||||| |||||||||||||||||||| |||  || ||||||||| |||||    
T  24983545 caacttaactactccactaactacaattaataagggtgttttagtaaatgacactaattttaccattgaaatcaactcaactaatcatttccttaa 24983450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 17828958 - 17829091
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||| ||||||||||||||||||||||||   ||||||||||||||||| |||||||||  ||||||||||||  |||||| |||| ||||| |||    
T  17828958 caacttaattacttcactaactacaattaataaagatattttagtaaatgatattaattttactgttgaaattaacactattaataatttccttaa-aac 17829056  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
      ||||  ||||||||| ||||||||||| |||||    
T  17829057 tatacacaaaccttaaaagactattattttgagac 17829091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 7920256 - 7920392
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||| |||| |||||||||||||||||||||||||| |||||||||||||| |  |||||||||||||||||| |||| ||||||||||||  |||| ||    
T  7920256 tcaaattaaatacttcactaactacaattaataaga-tattttagtaaatggttttaattttaccattgaaatcaacaaaattaatcatttctttaaaaa 7920354  T
Q  101 ccgtacatcaaccttaaacgactattatttagagacag 138  Q
     ||| ||  || ||||||||  |||||||| |||||||    
T  7920355 tcgtgcacaaatcttaaacggatattattttgagacag 7920392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 3720338 - 3720210
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||| | ||||||||||||||||||||||| |||| ||||||  ||| |||||||  |||||||| |||| ||||||||||||  |||||||    
T  3720338 tcaacttaactattccactaactacaattaataagagtgtttttgtaaatactacaaattttataattgaaatcaacacaattaatcatttcattaataa 3720239  T
Q  101 ccgtacatcaaccttaaacgactattatt 129  Q
     ||| ||  ||||||||||||||| ||||    
T  3720238 tcgtgcacaaaccttaaacgactaatatt 3720210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 1225065 - 1225154
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    |||||||||| |||||||||||| ||||||||||| ||||||||||||| ||| ||||||||| ||| |||| |||| ||||||||||||    
T  1225065 caacttaacttcttcactaactaaaattaataagaatattttagtaaataatattaattttactatttaaatcaacacaattaatcattt 1225154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 21804610 - 21804536
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||| | ||||||||||||    
T  21804610 cactaactacaattaataaga-tatttaagtaaatgatactaattttacaattgaaattaatacaattaatcattt 21804536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 15582302 - 15582389
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcatt 90  Q
    |||||||| ||||||||||||||||  | |||  |||||||| ||||||||||| |||||||||||||||| |||| |||||||||||    
T  15582302 aacttaaccacttcactaactacaacaagtaaatgtattttaataaatgatactgattttaccattgaaatcaacacaattaatcatt 15582389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 34300013 - 34300084
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaat 73  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||||| |||||||||||| |||| ||||    
T  34300013 caacttaactacttcactaaccacaattaataaggatattttagtaaataatactaattttatcattcaaat 34300084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 11143683 - 11143597
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacat-aattaatc 87  Q
    ||||||||||||||||||||||| |||||||||| ||  ||||||||||||||||||||||| |||  |||| ||||| ||||||||    
T  11143683 caacttaactacttcactaactataattaataagggtgatttagtaaatgatactaattttatcatcaaaatcaacatcaattaatc 11143597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 8115129 - 8115068
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccatt 68  Q
    |||||| | ||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  8115129 taactaatccactaactaaaattaataagagtattttagtaaatgatactaattttatcatt 8115068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 136
Target Start/End: Complemental strand, 27448231 - 27448118
Alignment:
Q  23 tacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgac 122  Q
    ||||||||||||   | |||||||||||||||||||||| | |||  |||| |||| |||||||||||| ||||||||  || ||  ||||||||||||     
T  27448231 tacaattaataatgatgttttagtaaatgatactaatttcatcatcaaaatcaacacaattaatcatttccttaataattgtgcaaaaaccttaaacgat 27448132  T
Q  123 tattatttagagac 136  Q
    ||||||||||||||    
T  27448131 tattatttagagac 27448118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 6834450 - 6834334
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaacctta 116  Q
    |||||||| |||||||||  || ||||||||||||||| |||||| || ||  |||| |||| ||||||| ||||||||||||| ||| ||| ||| |||    
T  6834450 actaactataattaataaaggtgttttagtaaatgatattaatttgactatcaaaatcaacacaattaattattttcttaataatcgtgcataaacttta 6834351  T
Q  117 aacgactattatttaga 133  Q
    ||  |||||||||||||    
T  6834350 aagaactattatttaga 6834334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 28101448 - 28101317
Alignment:
Q  9 actacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacat 108  Q
    |||||| |||||||||||||||  ||  | ||||||||||||||||||||||||| ||||||||| |||||||| |||  || |||||| ||   |  ||    
T  28101448 actactacactaactacaattatcaaatgaattttagtaaatgatactaattttatcattgaaatcaacataataaatacttctcttaaaaattatgtat 28101349  T
Q  109 caaccttaaacgactattatttagagacagaa 140  Q
     ||  |||||||||||||||||| ||||||||    
T  28101348 aaattttaaacgactattatttaaagacagaa 28101317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 181574 - 181700
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| ||||||||| |||||||||   | |||||||||||  |||||||||||| |||||||| || | ||||||| ||||| |||||||     
T  181574 caacttaactactccactaactataattaataatgatgttttagtaaatactactaattttactattgaaatcaatacaattaat-atttttttaataat 181672  T
Q  102 cgtacatcaaccttaaacgactattatt 129  Q
    ||| |   ||||||| ||||||| ||||    
T  181673 cgtgctcaaaccttagacgactaatatt 181700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 130
Target Start/End: Complemental strand, 8115059 - 8114980
Alignment:
Q  51 gatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgactattattt 130  Q
    ||||| |||||||| ||||||||| |||||||||||||||||||||| ||  |||||  ||| |||||||| ||||||||    
T  8115059 gataccaattttacaattgaaattgacataattaatcattttcttaaaaattgtacacaaactttaaacgaatattattt 8114980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 16431038 - 16431101
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttacc 65  Q
    |||||||| |||||||  |||||||| |||||||||||||||||||||||| || |||||||||    
T  16431038 caacttaattacttcataaactacaagtaataagagtattttagtaaatgacacaaattttacc 16431101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 4367349 - 4367295
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatact 56  Q
    ||||||||||||||||||||||||| ||||||||  |||||||| ||||||||||    
T  4367349 caacttaactacttcactaactacagttaataaggatattttagaaaatgatact 4367295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 37 - 123
Target Start/End: Original strand, 7072213 - 7072299
Alignment:
Q  37 gtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgact 123  Q
    |||||| ||||||||| ||||||||||||||| |||| |||| ||||||| |||||||||| ||   ||||  ||||||||||||||    
T  7072213 gtatttcagtaaatgacactaattttaccattaaaatcaacacaattaattattttcttaaaaattatacacaaaccttaaacgact 7072299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 26592352 - 26592438
Alignment:
Q  14 ttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||| ||| || ||| |||| ||||||||||||||  ||||||||||| |||| || || ||||||||||| ||||||||    
T  26592352 ttcactaactataataaacaagggtatattagtaaatgatacacattttaccattaaaatcaatattattaatcatttccttaataa 26592438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 8695067 - 8695124
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaatttta 63  Q
    ||||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||    
T  8695067 ttaaccacttcactaactacaattaataagaatgttttagtaaatgctattaatttta 8695124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 2423662 - 2423734
Alignment:
Q  28 ttaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||| ||||| ||||||||||  ||||||||||| |||| ||||  |||||||||||||| |||||    
T  2423662 ttaataagagtgttttaataaatgatacatattttaccattaaaatcaacaatattaatcattttctgaataa 2423734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 17835402 - 17835529
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||||||||  || |||||||||||||||  |||||||||||||||| | ||||||||  ||| |||| || | ||||||| ||||| | || ||     
T  17835402 caacttaactactaaacaaactacaattaataaatgtattttagtaaatgagattaattttattattaaaatcaatacaattaattatttt-tcaaaaaa 17835500  T
Q  102 cgtacatcaaccttaaacgactattattt 130  Q
    | ||||  ||| |||||||||||||||||    
T  17835501 cttacacaaactttaaacgactattattt 17835529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 97
Target Start/End: Complemental strand, 25418057 - 25417966
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||||||| |||| || |||||||| | ||||||| ||||| ||| |||||||| ||||||||| ||  ||  |||||||||||||||    
T  25418057 ttaactacttcattaacaacgattaataaaaatattttactaaataatattaattttaacattgaaatcaatctacctaatcattttcttaa 25417966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 105
Target Start/End: Complemental strand, 12605554 - 12605456
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgta 105  Q
    ||||||||  |||||||| |||||||||  || ||||| |||||||||  |||||| ||||| |||| ||  | |||||||||||| ||||||||||||    
T  12605554 taactactctactaactaaaattaataaaggtgttttaataaatgatataaattttgccattaaaatcaatcttattaatcattttgttaataaccgta 12605456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 4582053 - 4581972
Alignment:
Q  26 aattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtaca 107  Q
    |||||||| || ||||||||||||||||| ||||||||||||| |||| |||| |  |||| |||||| ||| || ||||||    
T  4582053 aattaatatgaatattttagtaaatgatattaattttaccattaaaatcaacacagctaattattttcataagaatcgtaca 4581972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 4590670 - 4590610
Alignment:
Q  26 aattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaat 86  Q
    |||||||| || |||||||||||| |||| ||||||||| |||||||| |||| |||||||    
T  4590670 aattaatatgaatattttagtaaacgatattaattttactattgaaatcaacacaattaat 4590610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 34657658 - 34657610
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaat 50  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||| |||||    
T  34657658 caacttaactactccactaactacaattaataaaagtgttttaataaat 34657610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 22398432 - 22398467
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagt 38  Q
    ||||||||||||||| ||||||||||||||||||||    
T  22398432 aacttaactacttcaataactacaattaataagagt 22398467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 7764335 - 7764246
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    ||||||| ||| | ||| |||||| ||||||||   |||||||| ||||| ||| ||||||||||||| |||| |||||||||||| ||||    
T  7764335 tcaacttgactgcctcaataactataattaatagaggtattttaataaat-atattaattttaccattaaaatcaacataattaataattt 7764246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 27823338 - 27823416
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||||||||||| ||| ||||| ||||||| ||| ||||||  ||||| ||||||  || |||| ||||||||||    
T  27823338 taactacaattaataaaagtgttttaataaatgaaactcattttattattgagattaactcaactaattattttcttaa 27823416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 13206929 - 13206884
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagt 46  Q
    |||| ||||| ||| ||||||||||||||||||| |||||||||||    
T  13206929 tcaatttaacaactccactaactacaattaataaaagtattttagt 13206884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 32251887 - 32251980
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||| ||| ||||||| ||| |||||  || |||||||| ||||  |  ||||| |||||||||| ||||| |||||||||||| |||||||    
T  32251887 taactatttcgctaactaaaatgaataatggtgttttagtacatgaaccatatttttccattgaaatcaacattattaatcatttttttaataa 32251980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 33510158 - 33510218
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaatttta 63  Q
    |||||||||||||  | ||| |||||||||||| | ||||||||||||| ||||||||||||    
T  33510158 caacttaactactcaattaattacaattaataaaaatattttagtaaat-atactaatttta 33510218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 34436304 - 34436271
Alignment:
Q  19 taactacaattaataagagtattttagtaaatga 52  Q
    |||||| |||||||||||||||||||||||||||    
T  34436304 taactataattaataagagtattttagtaaatga 34436271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 2e-43; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 16463708 - 16463841
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    ||||| |||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||  |||| |||| |||||||||||| ||||||||||    
T  16463708 aactttactactccactaactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatttccttaataacc 16463807  T
Q  103 gtacatcaaccttaaacgactattatttagagac 136  Q
    || ||| |||||||||||||||||||||||||||    
T  16463808 gtgcataaaccttaaacgactattatttagagac 16463841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 39785603 - 39785740
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgata---ctaattttaccattgaaattaacataattaatcattttcttaat 98  Q
    ||||||||||||| || |||||||||||||||||||| |||||||||||||||   |||||||||||||  |||| |||| |||||||||||| ||||||    
T  39785603 caacttaactactccattaactacaattaataagagtgttttagtaaatgatagtactaattttaccatcaaaatcaacacaattaatcatttccttaat 39785702  T
Q  99 aaccgtacatcaaccttaaacgactattatttagagac 136  Q
    |||||| |||||||||||||||||||||||||||||||    
T  39785703 aaccgtgcatcaaccttaaacgactattatttagagac 39785740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 15359182 - 15359048
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| |||||||||||||||||||| || ||||||||||||||| |||||||| |||  |||| |||| |||||||||| |||||||||||    
T  15359182 caacttaactactccactaactacaattaataagggtgttttagtaaatgatattaattttatcatcaaaatcaacacaattaatcatcttcttaataac 15359083  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    ||| |||||||||||||||||||||||||| ||||    
T  15359082 cgtgcatcaaccttaaacgactattatttaaagac 15359048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 39691507 - 39691642
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||| |||||| |||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||| |||| |||||||||||||||||||||    
T  39691507 tcaactttactactccactaactgcaattaataagagtattttagtaaatgatattaattttatcattgaaatcaacacaattaatcattttcttaataa 39691606  T
Q  101 ccgtacatcaaccttaaacgactattatttagagac 136  Q
     ||| ||  |||||||||||| ||| ||||||||||    
T  39691607 tcgtgcacaaaccttaaacgattataatttagagac 39691642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 37322447 - 37322581
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcatttt-cttaataac 101  Q
    |||||||||||| |||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||| |||| ||| ||||||||| ||||||||     
T  37322447 aacttaactactccactaactacaattaataagggtattttaataaatgatattaattttaccattgaaatcaacacaatcaatcattttccttaataat 37322546  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    ||| ||| |||||||||||||||| ||||||||||    
T  37322547 cgtgcataaaccttaaacgactataatttagagac 37322581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 45235600 - 45235733
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    |||||||||| |||| ||||||||||||||||| || ||||||||||||||| |||||||||||||||||| |||| ||| |||||||| |||||||| |    
T  45235600 aacttaactatttcattaactacaattaataagggtgttttagtaaatgatattaattttaccattgaaatcaacacaatcaatcatttccttaataatc 45235699  T
Q  103 gtacatcaaccttaaacgactattatttagagac 136  Q
    || ||  |||||||||||||||||||||||||||    
T  45235700 gtgcacaaaccttaaacgactattatttagagac 45235733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 36794302 - 36794436
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| ||||||||||| |||||||| |  |||||||||| |||||||||||||||||  |||| |||| |||||||||||| |||||||||    
T  36794302 caacttaactactccactaactacagttaataagggcgttttagtaaaagatactaattttaccatcaaaatcaacacaattaatcatttccttaataac 36794401  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    | | |||||| ||||||||||||||||||||||||    
T  36794402 catgcatcaatcttaaacgactattatttagagac 36794436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 14523466 - 14523333
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    |||||||||||| ||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||| |||| ||  |||||||| ||||||||||    
T  14523466 aacttaactactccactaactacaattaataaggatattttagtaaatgatattaattttaccattgaaatcaacacaaaaaatcatttccttaataacc 14523367  T
Q  103 gtacatcaaccttaaacgactattatttagagac 136  Q
     | ||| ||| ||||||||||||| |||||||||    
T  14523366 ttgcataaactttaaacgactattttttagagac 14523333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 36354538 - 36354404
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| ||||||||||||||||||||||| ||| | ||||| ||||||||||||||||  |||| |||| || || |||||| ||||||||     
T  36354538 caacttaactactccactaactacaattaataagagtgtttcaataaataatactaattttaccatcaaaatcaacacaactagtcatttccttaataat 36354439  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    ||||||| ||||||||| |||||||||||||||||    
T  36354438 cgtacataaaccttaaatgactattatttagagac 36354404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 43115898 - 43115773
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||| |||| ||||||||| |||| ||||||||||||  |||||||    
T  43115898 tcaacttaactactccactaactacaataaataagagtattttagtaaatgctactaactttatcattgaaatcaacacaattaatcatttctttaataa 43115799  T
Q  101 ccgtacatcaaccttaaacgactatt 126  Q
     ||  ||  ||| |||||||||||||    
T  43115798 tcgcgcacaaactttaaacgactatt 43115773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 16805899 - 16806023
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||| ||| ||||||||||||||||||||  ||||||||||||||||||||||||||| ||| |||| |||| ||||||||||||  |||||||     
T  16805899 caacttaacaactccactaactacaattaataaggatattttagtaaatgatactaattttactattaaaatcaacacaattaatcatttctttaataat 16805998  T
Q  102 cgtacatcaaccttaaacgactatt 126  Q
    ||| ||  |||||||||| ||||||    
T  16805999 cgtgcacaaaccttaaactactatt 16806023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 16845180 - 16845304
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||| ||| ||||||||||||||||||||  ||||||||||||||||||||||||||| ||| |||| |||| ||||||||||||  |||||||     
T  16845180 caacttaacaactccactaactacaattaataaggatattttagtaaatgatactaattttactattaaaatcaacacaattaatcatttctttaataat 16845279  T
Q  102 cgtacatcaaccttaaacgactatt 126  Q
    ||| ||  |||||||||| ||||||    
T  16845280 cgtgcacaaaccttaaactactatt 16845304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 32783404 - 32783515
Alignment:
Q  24 acaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgact 123  Q
    |||||||||||  || ||||||||||||||| ||||||||| ||  |||| |||| ||||||||||||||||||||||||| ||||||||||||| || |    
T  32783404 acaattaataaaggtgttttagtaaatgatattaattttactatcaaaataaacacaattaatcattttcttaataaccgtgcatcaaccttaaatgatt 32783503  T
Q  124 attatttagaga 135  Q
    ||||||||||||    
T  32783504 attatttagaga 32783515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 43410443 - 43410578
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| || |||||||||||||||||  ||||||||||||||||| |||||||| |||||| || |||| ||||||| |||| ||||||||    
T  43410443 tcaacttaactactccattaactacaattaataaggatattttagtaaatgatattaattttatcattgatatcaacacaattaataatttccttaataa 43410542  T
Q  101 ccgtacatcaaccttaaacgactattatttagagac 136  Q
     ||| ||  ||| ||||| |||||| ||||||||||    
T  43410543 tcgtgcacaaacattaaaggactataatttagagac 43410578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 17695348 - 17695482
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||||||||  |||||||| ||||||||||| |||||| ||||||||||  ||||||||||||||||| || | |||||||||||| ||||||||     
T  17695348 caacttaactactctactaactataattaataagaatatttttgtaaatgatatcaattttaccattgaaatcaatacaattaatcatttccttaataat 17695447  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    ||| ||  |||||||||||| ||| |||| |||||    
T  17695448 cgtgcacaaaccttaaacgattataattttgagac 17695482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 25637499 - 25637632
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| |  ||||||||||||||||  || ||||||||||||| ||||||||||||||  |||| |||| |||||||||||| ||| ||||     
T  25637499 caacttaactactcctataactacaattaataaaggtgttttagtaaatgacactaattttaccatcaaaatcaacacaattaatcatttcctt-ataat 25637597  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    ||| ||| |||||||||| ||||||||||||||||    
T  25637598 cgtgcataaaccttaaacaactattatttagagac 25637632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 5789743 - 5789616
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||| |||||||||||||||||||||| || ||||||||||||  ||||||||||| |||||| | || | |||||||||||| ||||||||     
T  5789743 caacttaactatttcactaactacaattaataagggtgttttagtaaatgccactaattttactattgaattcaatacaattaatcatttccttaataat 5789644  T
Q  102 cgtacatcaaccttaaacgactattatt 129  Q
    ||| ||  ||||||||| ||||| ||||    
T  5789643 cgtgcacaaaccttaaatgactaatatt 5789616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 125
Target Start/End: Complemental strand, 31448788 - 31448665
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||| |||||||||| |||||| |||| || |||||||||||||  |||||||||||||  |||| |||| |||||||||||| ||||||||     
T  31448788 caacttaactatttcactaactgcaattagtaagggtgttttagtaaatgactctaattttaccatcaaaatcaacacaattaatcatttccttaataat 31448689  T
Q  102 cgtacatcaaccttaaacgactat 125  Q
    ||| ||  ||||||||||||||||    
T  31448688 cgtgcacaaaccttaaacgactat 31448665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 34120532 - 34120400
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||| | |||||||||||||||||||   ||||||||||||| |||||| |||||||||  |||| |||| |||||||||||||||||||||     
T  34120532 caacttaactattccactaactacaattaataaa--tattttagtaaataatactagttttaccatcaaaatcaacacaattaatcattttcttaataat 34120435  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    | | ||| ||| |||||||  ||||||||||||||    
T  34120434 catgcataaactttaaacggttattatttagagac 34120400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 130
Target Start/End: Original strand, 19937730 - 19937823
Alignment:
Q  37 gtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgactattattt 130  Q
    |||||||||||||||||| |||||||||||||||||| |||| |||||||||||| |||||||| ||| ||  |||||||||||||||| ||||    
T  19937730 gtattttagtaaatgatattaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgactataattt 19937823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 35313906 - 35314014
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    |||||||||||| ||||||||||||||||||||  |  |||| |||||  ||||||||||||||||||||| |||| |||||||||||| |||||||| |    
T  35313906 aacttaactactccactaactacaattaataaggttgctttaataaatactactaattttaccattgaaatcaacacaattaatcatttccttaataatc 35314005  T
Q  103 gtacatcaa 111  Q
    || ||||||    
T  35314006 gtgcatcaa 35314014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 41221039 - 41220935
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccg 103  Q
    |||||||||||||| |||||||||||||||| | ||||||| ||||||||||||||||||  |||||||| |||| |||||||||| || |||| || ||    
T  41221039 acttaactacttcattaactacaattaataaaaatattttaataaatgatactaattttataattgaaatcaacacaattaatcatgtttttaaaaatcg 41220940  T
Q  104 tacat 108  Q
    |||||    
T  41220939 tacat 41220935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 16377747 - 16377632
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgta 105  Q
    ||||||||| ||||||||||||||||||||  |||||| |||||||||| |||||||||||||| ||| |||| ||||||||||||  ||||||| |||     
T  16377747 ttaactactccactaactacaattaataaggttattttggtaaatgatattaattttaccattgtaatcaacacaattaatcatttctttaataatcgtg 16377648  T
Q  106 catcaaccttaaacga 121  Q
    ||  || |||||||||    
T  16377647 cacaaatcttaaacga 16377632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 8947147 - 8947049
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||||| ||||||||| ||||||||||  | |||||||||||  ||||||||||| ||||||||| |||| |||||||||||| ||||||||    
T  8947147 caacttaactactccactaactataattaataaggatgttttagtaaatattactaattttatcattgaaatcaacacaattaatcatttccttaataa 8947049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 34225607 - 34225725
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||| |||| || ||||||||||||||||| || ||||||||||| ||||||| ||||||||| |||| || ||||||| |||||| ||||||||    
T  34225607 tcaacttaaatactccattaactacaattaataagggtgttttagtaaataatactaagtttaccattaaaatcaatataattattcatttccttaataa 34225706  T
Q  101 ccgtacatcaaccttaaac 119  Q
     ||| ||  ||||||||||    
T  34225707 tcgtgcacaaaccttaaac 34225725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 1206781 - 1206708
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcatttt 92  Q
    |||||||||||||||||  |||||||||||||| |||||||||||||| |||||| ||||||||||||||||||    
T  1206781 taactacaattaataaggatattttagtaaatgttactaattttaccactgaaatcaacataattaatcatttt 1206708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 17346457 - 17346373
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaat 86  Q
    ||||||||||||| ||||||||||||||||||| | ||||||| ||||||||| |||||||||  ||||||| || |||||||||    
T  17346457 caacttaactactccactaactacaattaataaaaatattttaataaatgatattaattttacttttgaaatcaaaataattaat 17346373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 43699670 - 43699596
Alignment:
Q  26 aattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||| | |||||||| ||||||||||||||||||| |||||||| |||| | |||||||||||||||||||    
T  43699670 aattaataggtgtattttaataaatgatactaattttactattgaaatcaacacagttaatcattttcttaataa 43699596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 26608239 - 26608178
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaatttt 62  Q
    |||||||||||| | ||||||||| ||||||||||||||||||||||||||||| |||||||    
T  26608239 tcaacttaactaatccactaactataattaataagagtattttagtaaatgatattaatttt 26608178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 27501586 - 27501513
Alignment:
Q  49 atgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgac 122  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| |||||||| | ||||  |||||||||||||    
T  27501586 atgatactaattttaccattgaaatcaacataatttatcatttccttaataatcatacacaaaccttaaacgac 27501513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 3323337 - 3323254
Alignment:
Q  46 taaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgactattatt 129  Q
    |||||| ||||||||||||||||||||| |||| |||||||||||||  |||||| ||| ||  ||||||||||||||| ||||    
T  3323337 taaatgttactaattttaccattgaaatcaacacaattaatcatttttataataatcgtgcacaaaccttaaacgactaatatt 3323254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 101
Target Start/End: Original strand, 31976370 - 31976465
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||| ||||||||| ||||| ||||||| ||||||||||||| ||  ||||||| |||||||| ||||  | ||||||||| |||||||||    
T  31976370 ttaactactccactaactataattattaagagtgttttagtaaatgaaacatattttactattgaaatcaacactactaatcatttccttaataac 31976465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 34438081 - 34437994
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgt 104  Q
    |||| ||| ||||||||||| ||||||||||||||||||  |||||  |||| |||| ||||| |||||||||||| |||||||||||    
T  34438081 actatctataattaataagaatattttagtaaatgatacatattttgtcattaaaatcaacattattaatcatttttttaataaccgt 34437994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 26608008 - 26607930
Alignment:
Q  57 aattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgactattatttagaga 135  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| ||| ||  |||||||||| | ||| |||||||||    
T  26608008 aattttaccattgaaatcaacacaattaatcattttcttaataatcgtgcacaaaccttaaactattataatttagaga 26607930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 7 - 104
Target Start/End: Original strand, 38763571 - 38763668
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgt 104  Q
    ||||||||| || ||||| |||||||| |||||||||||||||||| ||  ||||||||||| |||| ||||  | ||| ||||| ||||||||||||    
T  38763571 taactacttgacaaactataattaatatgagtattttagtaaatgaaacacattttaccattaaaatcaacactactaaccatttccttaataaccgt 38763668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 39329754 - 39329663
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaatta--acataattaatcattttctta 96  Q
    ||||||||| || |||||||||||||||||||| |||||||||||| || |||||||| ||||||||| |  ||| |||| ||||||||||||    
T  39329754 ttaactactcca-taactacaattaataagagtgttttagtaaatgctattaattttatcattgaaatcaatacacaattgatcattttctta 39329663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 10005197 - 10005083
Alignment:
Q  24 acaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgact 123  Q
    |||||||||||   ||||||||||||||||||||||||||    |||||| |||| |||| ||||||||||| ||||  || ||  ||||||||||||||    
T  10005197 acaattaataaagatattttagtaaatgatactaattttattgctgaaatcaacacaattgatcattttctt-ataaatgtgcacaaaccttaaacgact 10005099  T
Q  124 attatttagagacaga 139  Q
     |||||| ||||||||    
T  10005098 gttattttgagacaga 10005083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 97
Target Start/End: Complemental strand, 32831266 - 32831175
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    ||||||||| || ||||||||||||||||   | ||||||||||||||| |||||||||||||| |||||||  |  ||| |||||||||||    
T  32831266 ttaactactccaataactacaattaataaagatgttttagtaaatgatattaattttaccattgtaattaactaagctaaacattttcttaa 32831175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 35242392 - 35242309
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaa 85  Q
    |||||||||||||  ||||||||||||||||||   |||| ||||||||||| ||||||||| |||| |||| |||| ||||||    
T  35242392 caacttaactactcaactaactacaattaataaatatattctagtaaatgattctaattttaacattaaaatcaacacaattaa 35242309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 19426473 - 19426563
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattg-aaattaacataattaatcattt 91  Q
    |||||||||||||  ||| ||||||||||||||   |||||||||||||| | ||||||||| ||||| |||| |||| ||||||||||||    
T  19426473 caacttaactactcgacttactacaattaataatgatattttagtaaatgttgctaattttatcattgaaaatcaacacaattaatcattt 19426563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 34451430 - 34451340
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcatttt 92  Q
    ||||| ||||| |||| |||||| ||||||| | | ||||||||||||| |||||||||||  ||| ||||| |||||||||||| |||||    
T  34451430 caactaaactatttcaataactagaattaatgaaaatattttagtaaataatactaattttctcatcgaaatcaacataattaataatttt 34451340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 18853281 - 18853167
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaatt--ttaccattgaaattaacataattaatcattttcttaataaccgtacatcaacct 114  Q
    ||||||||||| ||||||||||||||| ||||||||||| ||||  ||| ||||||||| |||| ||||||| |||| |||||  | ||| ||  ||  |    
T  18853281 actaactacaactaataagagtattttggtaaatgatac-aattaattatcattgaaatcaacacaattaattatttccttaaagatcgtgcacaaattt 18853183  T
Q  115 taaacgactattattt 130  Q
    ||||||||||||||||    
T  18853182 taaacgactattattt 18853167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 19937402 - 19937442
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtatt 41  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  19937402 tcaacttaactactccactaactacaattaataagagtatt 19937442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 43730635 - 43730720
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    |||||||||||  | ||||||||||||||||| || ||||||||||||||| ||||||||||||| |||| |||| |  |||||||||    
T  43730635 acttaactactctagtaactacaattaataag-gt-ttttagtaaatgatattaattttaccattaaaatcaacacacctaatcattt 43730720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 11742622 - 11742497
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    |||||||||||| || ||||||||||||||||| || ||||| ||||| ||| | | ||||||||  |||| || | ||||||  | ||||||||||| |    
T  11742622 aacttaactactccattaactacaattaataagggtgttttaataaataatattga-tttaccatcaaaatcaatacaattaaaaaatttcttaataatc 11742524  T
Q  103 gtacatcaaccttaaacgactattatt 129  Q
    || ||| ||| ||||||||||| ||||    
T  11742523 gtgcataaacgttaaacgactaatatt 11742497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 27866527 - 27866604
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||||||||||||  ||||||| |||| |||| |||||||| |||| |||| ||||| ||||||||||| |||||    
T  27866527 taactacaattaataaggatattttactaaa-gatattaattttatcattaaaatcaacattattaatcatttccttaa 27866604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 28170637 - 28170588
Alignment:
Q  43 tagtaaatgatactaattttaccattgaaattaacataattaatcatttt 92  Q
    |||||||||  |||||||||||| ||||||| ||||||||||||||||||    
T  28170637 tagtaaatgcaactaattttacccttgaaatcaacataattaatcatttt 28170588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 129
Target Start/End: Original strand, 39443789 - 39443858
Alignment:
Q  60 tttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgactattatt 129  Q
    ||||| |||||||| |||| |||||||||||||||||||||  || ||  ||||||||||||||| ||||    
T  39443789 tttactattgaaatcaacaaaattaatcattttcttaataattgtgcacaaaccttaaacgactaatatt 39443858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 28186231 - 28186326
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    ||||||||||||||   ||||||| ||| ||||||  ||||||| ||||||||  ||||||||||||| | || ||||| |||||| ||||||||||    
T  28186231 tcaacttaactactctgctaactaaaatgaataaggatattttaataaatgattataattttaccattaatatcaacat-attaattattttcttaa 28186326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 5272210 - 5272155
Alignment:
Q  80 aattaatcattttcttaataaccgtacatcaaccttaaacgactattatttagaga 135  Q
    ||||||| |||| |||||||| ||| | | ||||||||||||||||||||||||||    
T  5272210 aattaattatttccttaataatcgtgcgtaaaccttaaacgactattatttagaga 5272155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 38187963 - 38187912
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccatt 68  Q
    ||||||||||||||||| | || ||||||||||| | |||||||||||||||    
T  38187963 actaactacaattaataggggtgttttagtaaattaaactaattttaccatt 38187912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 2053283 - 2053337
Alignment:
Q  9 actacttcactaactacaattaataagagtattttagtaaatgatactaatttta 63  Q
    |||||| |||| |||| |||||||| | |||||||||| ||||||||||||||||    
T  2053283 actactccactgactataattaatatgcgtattttagtgaatgatactaatttta 2053337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 26863451 - 26863405
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaat 50  Q
    ||||||||||| ||||||||||||||||||| ||| ||||| |||||    
T  26863451 acttaactactccactaactacaattaataaaagtgttttaataaat 26863405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 3601415 - 3601464
Alignment:
Q  15 tcactaactacaattaataagagtattttagtaaatgatactaattttac 64  Q
    ||||||||||||||||||||| || ||||||||||||  |||| ||||||    
T  3601415 tcactaactacaattaataagggtgttttagtaaatgcaactatttttac 3601464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 36173408 - 36173351
Alignment:
Q  31 ataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatca 88  Q
    |||||||||||||| ||||||||| |||||||| || | |||| |||| |||||||||    
T  36173408 ataagagtattttaataaatgatattaattttatcactaaaatcaacaaaattaatca 36173351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 38449200 - 38449159
Alignment:
Q  14 ttcactaactacaattaataagagtattttagtaaatgatac 55  Q
    ||||||||| | ||||||||||||| ||||||||||||||||    
T  38449200 ttcactaaccataattaataagagtgttttagtaaatgatac 38449159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 3323367 - 3323335
Alignment:
Q  2 caacttaactacttcactaactacaattaataa 34  Q
    ||||||||||||| |||||||||||||||||||    
T  3323367 caacttaactactccactaactacaattaataa 3323335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 18202123 - 18202159
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagt 38  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  18202123 caacttaactacttcactaactacatttaacaagagt 18202159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 2e-40; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 31271039 - 31271171
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||| |||||| ||||||||||||| |||| |||| ||| |||||||||||||||||     
T  31271039 caacttaactactccactaactataattaataagagtattttagtatatgatattaattttaccattaaaatcaacacaatcaatcattttcttaataat 31271138  T
Q  102 cgtacatcaaccttaaacgactattatttagag 134  Q
    ||||||  |||||||||||||||| ||||||||    
T  31271139 cgtacacaaaccttaaacgactataatttagag 31271171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 10098089 - 10097958
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| |||||||||||||||||||| || || |||||||||||| ||||||||||||  |||| || | ||||||||||||||||||||||    
T  10098089 caacttaactactccactaactacaattaataagggtgttatagtaaatgatattaattttaccatcaaaatcaatacaattaatcattttcttaataac 10097990  T
Q  102 cgtacatcaaccttaaacgactattatttaga 133  Q
    | | ||||||||||||||||||||||||||||    
T  10097989 catgcatcaaccttaaacgactattatttaga 10097958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 10180046 - 10179911
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| || | || || |||||||||||||||    
T  10180046 tcaacttaactactccactaactacaattaataagtgtattttagtaaattatactaattttaccattgaaatcaatacaactactcattttcttaataa 10179947  T
Q  101 ccgtacatcaaccttaaacgactattatttagagac 136  Q
     ||| ||  ||||||||||||||||| |||||||||    
T  10179946 tcgtgcacaaaccttaaacgactattttttagagac 10179911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 32476306 - 32476439
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    ||||||||||||||| ||||||||||||||||| |||||||| ||||||||| |||||||| ||||||||| |||| ||| |||||||||||||||||||    
T  32476306 aacttaactacttcattaactacaattaataagggtattttaataaatgatattaattttatcattgaaatcaacagaatcaatcattttcttaataacc 32476405  T
Q  103 gtacatcaaccttaaacgactattatttagagac 136  Q
    || ||  |||||||||||||| | ||||||||||    
T  32476406 gtgcacaaaccttaaacgactttaatttagagac 32476439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 1875685 - 1875568
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtac 106  Q
    |||||| |||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||| |||| |||||||||||| |||||||| ||| |    
T  1875685 taactatttcactaactacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgc 1875586  T
Q  107 atcaaccttaaacgacta 124  Q
    |  |||||||||||||||    
T  1875585 acaaaccttaaacgacta 1875568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 31231748 - 31231883
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| |||||||||||||||||||| || ||| ||||||||||| ||||||||||||  ||||  ||| |||| ||||||| |||||||||    
T  31231748 caacttaactactccactaactacaattaataagggtgtttcagtaaatgatattaattttaccatcaaaatcgacacaattcatcatttccttaataac 31231847  T
Q  102 cgtacatcaacc-ttaaacgactattatttagagac 136  Q
    ||| |||||||| ||||| |||||||||||||||||    
T  31231848 cgtgcatcaacctttaaaagactattatttagagac 31231883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 34394035 - 34393918
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaa 118  Q
    |||||| |||||||||  || ||||||||||| ||||||||||||||||  |||| |||| |||||||||||| |||||||||||| ||||||| |||||    
T  34394035 taactataattaataaaggtgttttagtaaattatactaattttaccatcaaaatcaacacaattaatcatttccttaataaccgtgcatcaactttaaa 34393936  T
Q  119 cgactattatttagagac 136  Q
    ||||||||||||||||||    
T  34393935 cgactattatttagagac 34393918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 4428448 - 4428317
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    |||||||||| |||||||||||||||||||||  |||||||||||||||||| |||||||| |||| |||| |||| || ||||||||||||||| ||      
T  4428448 aacttaactaattcactaactacaattaataattgtattttagtaaatgataataattttatcattaaaatcaacacaaataatcattttcttaa-aaat 4428350  T
Q  103 gtacatcaaccttaaacgactattatttagaga 135  Q
     ||||| ||||||||||||||||||||| ||||    
T  4428349 atacataaaccttaaacgactattattttgaga 4428317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 7 - 101
Target Start/End: Complemental strand, 396704 - 396610
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||| |||||||||||||||||  |||| ||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  396704 taactacttcattaactacaattaataaggatattgtagtaaatgatactaattttaccgttgaaatcaacataattaatcatttccttaataac 396610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 17719356 - 17719222
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| ||||||||| ||||||||||  ||||||||||||| ||||||| ||||||||| |||| |  | ||||||||||||| |||||||     
T  17719356 caacttaactactccactaactataattaataaggatattttagtaaataatactaactttaccattaaaatcattacaattaatcatttttttaataat 17719257  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    ||| ||  || ||||||||||||||||||||||||    
T  17719256 cgtgcacaaatcttaaacgactattatttagagac 17719222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 13335235 - 13335379
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    ||||||||||||  ||||||| ||||||||||  || ||||| ||||||||||||||||||||||  |||| |||| |||||| ||||| |||||||| |    
T  13335235 aacttaactactctactaactgcaattaataaatgtgttttactaaatgatactaattttaccatcaaaatcaacacaattaaccatttccttaataatc 13335334  T
Q  103 gtacatcaaccttaaacgactattatttagagacagaaaggagtat 148  Q
    || ||| |||||||||||| ||||||||||||| |||| |||||||    
T  13335335 gtgcataaaccttaaacgattattatttagaga-agaatggagtat 13335379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 21216199 - 21216078
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| ||||||||||||||||||||  | ||||||||||||  |||||||||||||||||||| |||| |||||||||||| ||||||||     
T  21216199 caacttaactactccactaactacaattaataaggatgttttagtaaatgcaactaattttaccattgaaatcaacacaattaatcatttccttaataat 21216100  T
Q  102 cgtacatcaaccttaaacgact 123  Q
    | | ||  ||||||||||||||    
T  21216099 catgcacaaaccttaaacgact 21216078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 91
Target Start/End: Complemental strand, 44761592 - 44761503
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    ||||||||||||| |||||||||||||||||||| || |||||||||||| ||||||||||||||||||||| |||| ||||||||||||    
T  44761592 caacttaactactccactaactacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcattt 44761503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 39405779 - 39405907
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||| |||| ||||||||  |||||||||   |||| ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||    
T  39405779 tcaacttaattactccactaactgtaattaataaagatattatagtaaatgatactaattttatcattgaaattaacacaattaatcatttccttaataa 39405878  T
Q  101 ccgtacatcaaccttaaacgactattatt 129  Q
     ||| ||  ||||||||||||||| ||||    
T  39405879 tcgtgcacaaaccttaaacgactaatatt 39405907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 45425764 - 45425637
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||| |||| ||||||||||||||||||||| | ||||| |||||| || ||||||||||||| |||| |||| |||||||||||||||||||||     
T  45425764 caacttaattactccactaactacaattaataagaatgttttaataaatgttattaattttaccattaaaatcaacacaattaatcattttcttaataat 45425665  T
Q  102 cgtacatcaaccttaaacgactattatt 129  Q
    | | ||| || |||||||||||| ||||    
T  45425664 catgcataaaacttaaacgactaatatt 45425637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 7172931 - 7173065
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||||||||| ||||||||||||||||   | |||||||||||| ||||||||||| ||||||||| |||| ||||||||||||  |||||||    
T  7172931 tcaacttaactacttcattaactacaattaataaatatgttttagtaaatgctactaattttatcattgaaatcaacacaattaatcatttctttaataa 7173030  T
Q  101 ccgtacatcaaccttaaacgactattatttagaga 135  Q
       ||||  |||||||||| ||||| |||||||||    
T  7173031 tgatacacaaaccttaaacaactataatttagaga 7173065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 9300212 - 9300094
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| ||||||||| |||||||||| || |||||||||||| || ||||||||||||| |||| |||| ||  |||||||||||||||||    
T  9300212 tcaacttaactactccactaactaaaattaataagggtgttttagtaaatgctattaattttaccattaaaatcaacacaaacaatcattttcttaataa 9300113  T
Q  101 ccgtacatcaaccttaaac 119  Q
     ||| ||| ||||||||||    
T  9300112 tcgtgcataaaccttaaac 9300094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 22771933 - 22771799
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||| ||| ||||||||||||||||||||||||| || ||||| ||||||| ||||||||||||||  |||| |||  ||||||||| || |||||||||    
T  22771933 caacataattacttcactaactacaattaataagggtgttttaataaatgacactaattttaccatcaaaatcaacccaattaatcaattccttaataac 22771834  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
     || ||| ||||||||||||  |||||||||||||    
T  22771833 tgtgcataaaccttaaacgataattatttagagac 22771799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 40996463 - 40996329
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||| | |||||||||||||||||||||| || ||||||||||||| |||||||||||  |  |||| |||| |||||||||||| ||||| ||     
T  40996463 caacttaaccatttcactaactacaattaataagggtgttttagtaaatgaaactaattttacattcaaaatcaacacaattaatcatttccttaacaat 40996364  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
     || ||| |||||||||||| ||||||||||||||    
T  40996363 tgtgcataaaccttaaacgattattatttagagac 40996329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 51132 - 51264
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    ||||||| || | |||||||||||||||||||  || |||| |||||||||||| ||||||| ||| |||| |||| ||||||||||||||||||||| |    
T  51132 aacttaattaatccactaactacaattaataaatgtgtttttgtaaatgatacttattttac-attaaaatcaacacaattaatcattttcttaataatc 51230  T
Q  103 gtacatcaaccttaaacgactattatttagagac 136  Q
    || ||  |||||||||| ||||||||||||||||    
T  51231 gtgcacaaaccttaaacaactattatttagagac 51264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 39482635 - 39482760
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccg 103  Q
    ||||||||| | ||||||||| |||||||||| || |||||||||||  ||||||||||||| ||||||| |||| ||||||||||||||||||||| ||    
T  39482635 acttaactagtccactaactataattaataagggtgttttagtaaattctactaattttacccttgaaatcaacacaattaatcattttcttaataatcg 39482734  T
Q  104 tacatcaaccttaaacgactattatt 129  Q
    | ||  || |||||||||||| ||||    
T  39482735 tgcacaaatcttaaacgactaatatt 39482760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 2767375 - 2767255
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaacctt 115  Q
    |||||||||||| |||||||  | ||||| ||||||||||||||||||||||  |||| |||| ||||||| |||| |||||||||||| |||||||||     
T  2767375 cactaactacaaataataaggatgttttaataaatgatactaattttaccatcaaaatcaacacaattaattatttccttaataaccgtgcatcaacctc 2767276  T
Q  116 aaacgactattatttagagac 136  Q
    |||| |||| |||||||||||    
T  2767275 aaacaactactatttagagac 2767255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 26 - 128
Target Start/End: Complemental strand, 7703230 - 7703128
Alignment:
Q  26 aattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgactat 125  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||| |||| ||||||| |||| |||||||| | ||||  ||| ||||||||||||    
T  7703230 aattaataagggtattttagtaaatgatattaattttaccattgaaatcaacacaattaattatttccttaataatcttacacaaactttaaacgactat 7703131  T
Q  126 tat 128  Q
    |||    
T  7703130 tat 7703128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 11977033 - 11976907
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    ||||||||||||  ||||||||||||||||||| ||||||||||||||| |||| ||| |||||||||||| |||| ||||||| |||| | |||||| |    
T  11977033 aacttaactactctactaactacaattaataagggtattttagtaaatgctactgattataccattgaaatcaacacaattaatgatttccataataatc 11976934  T
Q  103 gtacatcaaccttaaacgactattatt 129  Q
     | ||  ||||||||||||||| ||||    
T  11976933 atgcacaaaccttaaacgactaatatt 11976907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 42972592 - 42972490
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaacctt 115  Q
    ||||||||| |||||||||| ||||||||||||| |||| |||||||||||||||||| || | ||||||||||||||||||||| ||| ||  ||||||    
T  42972592 cactaactataattaataagggtattttagtaaacgatattaattttaccattgaaatcaaaacaattaatcattttcttaataatcgtgcacaaacctt 42972493  T
Q  116 aaa 118  Q
    |||    
T  42972492 aaa 42972490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 26626203 - 26626088
Alignment:
Q  9 actacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacat 108  Q
    |||||| ||||||||||||||||||||  ||||||| ||||| |||| |||||||||||  || | |||| |||||||||||| |||||||| ||| |||    
T  26626203 actactccactaactacaattaataaggatattttaataaattatacaaattttaccatcaaattcaacacaattaatcatttccttaataatcgtgcat 26626104  T
Q  109 caaccttaaacgacta 124  Q
     |||||||||||||||    
T  26626103 aaaccttaaacgacta 26626088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 40 - 131
Target Start/End: Original strand, 36967417 - 36967508
Alignment:
Q  40 ttttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgactattattta 131  Q
    ||||||||||||||| ||||||||||||  |||| |||| |||||||||||| |||||||| ||| ||| ||||||||||||||||||||||    
T  36967417 ttttagtaaatgatattaattttaccatcaaaatcaacacaattaatcatttccttaataatcgtgcataaaccttaaacgactattattta 36967508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 34948785 - 34948687
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||||| |||||||||||||||||||  || |||  |||||||||||||||||||| ||| |||| |||| |||||||||||| ||||||||    
T  34948785 caacttaactactccactaactacaattaataaatgtgtttctgtaaatgatactaattttactatttaaatcaacacaattaatcatttccttaataa 34948687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 129
Target Start/End: Complemental strand, 39301018 - 39300912
Alignment:
Q  23 tacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgac 122  Q
    |||||||||| || || ||||||||||||||| |||||||||||| ||||| |||||||||||||||||  ||||||| ||||||  || ||||||||||    
T  39301018 tacaattaattagggttttttagtaaatgatattaattttaccatcgaaatcaacataattaatcatttctttaataatcgtacacaaatcttaaacgac 39300919  T
Q  123 tattatt 129  Q
    || ||||    
T  39300918 tactatt 39300912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 42887018 - 42887104
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatca 88  Q
    ||||||||||||  |||||||||||||||||||  |||||||||||||||||||||||||| | |||||||| |||| |||||||||    
T  42887018 caacttaactacgccactaactacaattaataaaggtattttagtaaatgatactaattttgctattgaaatcaacacaattaatca 42887104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 41092028 - 41092097
Alignment:
Q  18 ctaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatc 87  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||| ||||||||    
T  41092028 ctaactacaattaataagagtattttaataaatgatattaattttaccattgaaatcaacacaattaatc 41092097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 17823939 - 17824015
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaaca 78  Q
    |||||||||||||||||||||||||||||||||  ||||| ||||||| ||||||||||||| ||||||||| ||||    
T  17823939 caacttaactacttcactaactacaattaataaaggtattctagtaaaagatactaattttatcattgaaatcaaca 17824015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 6 - 97
Target Start/End: Complemental strand, 5053247 - 5053156
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    ||||||||| | ||||||||||||||||||| | ||||||||||||||| ||||||||||||  |||| |||| |||||||||||| |||||    
T  5053247 ttaactactccgctaactacaattaataagactgttttagtaaatgatattaattttaccatcaaaatcaacacaattaatcatttccttaa 5053156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 31331426 - 31331521
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||| ||||||||||||||||||||||||   ||||||||||||| ||| ||||||||  |||||||| || | |||||||||||| |||||    
T  31331426 caacttaattacttcactaactacaattaataatgatattttagtaaataataataattttataattgaaatcaatacaattaatcatttccttaa 31331521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 33765690 - 33765773
Alignment:
Q  14 ttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    ||||| ||||||||||||||| ||||| ||||||||||||| ||||||||  ||| |||| ||||||||||||||||| |||||    
T  33765690 ttcaccaactacaattaataaaagtatattagtaaatgatagtaattttagtattaaaatcaacataattaatcatttccttaa 33765773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 4924166 - 4924070
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    ||||||||||||||  | ||||||||||||||||   ||||||||||||| ||||||||||||||||| ||||  ||| || |||| ||||||||||    
T  4924166 tcaacttaactactctattaactacaattaataaagatattttagtaaataatactaattttaccattaaaatatacacaactaataattttcttaa 4924070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 31082637 - 31082733
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaat 98  Q
    ||||||||||||| ||||||||| |||||||||| || |||||||||||   |||||||||| |||| |||| || | |||||||||||| ||||||    
T  31082637 caacttaactactccactaactataattaataagggtgttttagtaaataccactaattttatcattaaaatcaagacaattaatcatttccttaat 31082733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 40028531 - 40028624
Alignment:
Q  3 aacttaactacttcactaacta----caattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcatttt 92  Q
    ||||||| ||||||||||||||    ||||||||||   ||||||| |||||| || |||||||||||||||||| ||||||||||||||||||    
T  40028531 aacttaattacttcactaactaaatacaattaataatgatattttaataaatgctattaattttaccattgaaatcaacataattaatcatttt 40028624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 27294157 - 27294023
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||| |||| |||||||| ||||||||||   |||||||||||| ||||||||||||| |||| |||| |||| ||||||| | ||  |||| ||     
T  27294157 caacttaattactccactaactgcaattaataaatatattttagtaaaagatactaattttatcattcaaatgaacacaattaataacttctttaaaaat 27294058  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    ||| ||  |||||||| | |||||||||| |||||    
T  27294057 cgtgcacaaaccttaaccaactattattttgagac 27294023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 34057716 - 34057626
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcatttt 92  Q
    ||||||||||| |||||||||||||| ||| ||   ||||||||||||| |||||| |||||  |||||||| |||||||||||| |||||    
T  34057716 caacttaactatttcactaactacaaataacaacgatattttagtaaataatactagttttattattgaaatcaacataattaattatttt 34057626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 44648621 - 44648540
Alignment:
Q  11 tacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcatttt 92  Q
    |||| |||||| |||||||| ||||  | |||||||||||||||||||||||||||||||||| |||  || ||||||||||    
T  44648621 tactccactaattacaattagtaagtatgttttagtaaatgatactaattttaccattgaaatcaactaaactaatcatttt 44648540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 1739709 - 1739785
Alignment:
Q  53 tactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgactattatt 129  Q
    ||||||||||||||||||||| |||| ||||||| |||| |||||||| ||||||  ||||||| ||||||| ||||    
T  1739709 tactaattttaccattgaaatcaacacaattaattatttccttaataatcgtacacaaaccttagacgactaatatt 1739785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 6611767 - 6611842
Alignment:
Q  54 actaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgactattatt 129  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| |||   | || |||||||||||| ||||    
T  6611767 actaattttaccattgaaatcaacataattaatcatttttttaataatcgtgtgtaaatcttaaacgactaatatt 6611842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 39329065 - 39329132
Alignment:
Q  30 aataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||| ||||||||  ||| ||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  39329065 aataagggtattttaaaaaacgatactaattttatcattaaaattaacacaattaatcattttcttaa 39329132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 9839909 - 9839791
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaacctta 116  Q
    |||||||| ||||||| |  |||||||| ||||| |||||||||||| | ||||||| || | | |||||||||| ||||| ||  ||| || ||| |||    
T  9839909 actaactataattaatgaatgtattttaataaataatactaattttatcgttgaaatcaaaacatttaatcatttccttaaaaattgtatataaacatta 9839810  T
Q  117 aacgactattatttagaga 135  Q
    |||||||||||||| ||||    
T  9839809 aacgactattattttgaga 9839791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 32678421 - 32678475
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatact 56  Q
    ||||||||||||| ||||||||||||||||||||  | |||||||||||||||||    
T  32678421 caacttaactactccactaactacaattaataaggatgttttagtaaatgatact 32678475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 53 - 135
Target Start/End: Original strand, 32678787 - 32678869
Alignment:
Q  53 tactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgactattatttagaga 135  Q
    ||||| |||||||||  |||| |||| |||||||||||| |||||||| |||  || ||| ||||||||||||||||||||||    
T  32678787 tactagttttaccatcaaaatcaacacaattaatcatttccttaataatcgtgtataaactttaaacgactattatttagaga 32678869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 14855027 - 14854934
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||| |||||||||||||||||||  || |||||| |||||  | ||||||||||||| |||| |||| ||| | |||||||||| ||||    
T  14855027 taactactccactaactacaattaataaaggtgttttagcaaatgcaattaattttaccattaaaatcaacacaatgattcattttcttgataa 14854934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 1739565 - 1739613
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgata 54  Q
    |||||||||| |||||||||||||||||||| |||||| ||||||||||    
T  1739565 ttaactacttaactaactacaattaataagaatattttggtaaatgata 1739613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 35732140 - 35732192
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatac 55  Q
    ||||| |||||| |||||| ||||||||||| |||||||||||||||||||||    
T  35732140 aactttactactccactaattacaattaataggagtattttagtaaatgatac 35732192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 39466131 - 39466063
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaatt 74  Q
    ||||||||| ||||||| || ||||||||   |||||||||||||||||||||||||| |||| |||||    
T  39466131 ttaactactgcactaaccacgattaataaagatattttagtaaatgatactaattttagcattaaaatt 39466063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 29226625 - 29226578
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaat 50  Q
    |||||||||||| ||||||||||||||||||||||| ||||| |||||    
T  29226625 aacttaactactccactaactacaattaataagagtgttttaataaat 29226578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 3117111 - 3117029
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    |||||||| || |||||| |||||| ||| || ||||||||||||| ||  |||||||||||||||| ||||  |||||||||||    
T  3117111 taactactccattaactataattaacaagggtgttttagtaaatgacac--attttaccattgaaatcaacactattaatcattt 3117029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 5356618 - 5356706
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    |||||||| || | || |||||||||||||||| ||||  ||||||||||||| |||||||| |||| |||| |||| || |||||||||    
T  5356618 caacttaattattccattaactacaattaataa-agtacattagtaaatgatattaattttatcattaaaatcaacacaactaatcattt 5356706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 29226278 - 29226231
Alignment:
Q  53 tactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||||  |||| |||| |||||||||||||||||||||    
T  29226278 tactaattttaccatcaaaatcaacacaattaatcattttcttaataa 29226231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 6796099 - 6796009
Alignment:
Q  46 taaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgactattatttagagac 136  Q
    ||||||||| ||||||||||||| |||| |||    ||||||||||| ||||||| ||| ||  ||| |||||||||||| ||||| ||||    
T  6796099 taaatgatattaattttaccattaaaatcaacgctgttaatcattttattaataatcgtgcacaaacattaaacgactataatttaaagac 6796009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 7672424 - 7672342
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaata 99  Q
    |||||||| ||||||||||  ||||||||||||| | ||  ||||||| ||| |||| |||||  ||||| ||||||||||||    
T  7672424 actaactataattaataaggatattttagtaaataaaacacattttactattaaaatcaacatttttaataattttcttaata 7672342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 39301055 - 39301021
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataag 35  Q
    |||||| ||||||||||||||||||||||||||||    
T  39301055 tcaactgaactacttcactaactacaattaataag 39301021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 12559635 - 12559700
Alignment:
Q  26 aattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    ||||||||| | |||||||||||||| || ||||||||  ||| |||| |||| ||||||||||||    
T  12559635 aattaataaaaatattttagtaaatggtattaattttattattaaaatcaacacaattaatcattt 12559700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 21649385 - 21649308
Alignment:
Q  53 tactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgactattattt 130  Q
    ||||| ||||| ||||| ||| ||||||||||| ||||||||||| ||  |||||  |||||||||| | ||||||||    
T  21649385 tactagttttatcattggaatcaacataattaaacattttcttaaaaattgtacacaaaccttaaacaattattattt 21649308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 5879073 - 5878993
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttctta 96  Q
    ||||||| | |||||||||  || ||||||| ||||||||  ||||||||||| |||| ||||  ||||||||||| ||||    
T  5879073 cactaaccataattaataaatgtgttttagtgaatgatacatattttaccattaaaatcaacaatattaatcatttcctta 5878993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 6323418 - 6323335
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||| || ||||||||| ||||| |||||||||||||| |  |||| |||| |||| || || |||||||||||| |||||||    
T  6323418 cactaattataattaataaaagtatgttagtaaatgatac-atatttatcattaaaatcaaaattattaatcatttttttaataa 6323335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 8741083 - 8741147
Alignment:
Q  40 ttttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgt 104  Q
    ||||||||||||| ||  ||||||||||  |||||| ||  | ||||||||||||||||||||||    
T  8741083 ttttagtaaatgaaacacattttaccatcaaaattagcaccactaatcattttcttaataaccgt 8741147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 12559582 - 12559622
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtatttt 43  Q
    ||||| |||| ||||||||||||||||||||||| ||||||    
T  12559582 aacttgactagttcactaactacaattaataagaatatttt 12559622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 15810063 - 15809985
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||||||| ||||| ||| ||||||||||| ||| ||||| ||||||| |||| |||  || |||||||||||||||    
T  15810063 actaactacaat-aataa-agtgttttagtaaataatattaattctaccattaaaatcaactgaactaatcattttcttaa 15809985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 40109790 - 40109854
Alignment:
Q  40 ttttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgt 104  Q
    ||||||||||| ||||||||||||| |||||||| ||   ||||||||||||  |||| ||||||    
T  40109790 ttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttaaaaaccgt 40109854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 1722 - 1855
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| |||| ||||||||||||| | || ||| ||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  1722 caacttaactactccactgactacaattaatacgggtgtttaagtaaatgatactaattttaccatcaaaatcaacataattaatcattttcttaataac 1821  T
Q  102 cgtacatcaaccttaaacgactattatttagaga 135  Q
    |||  || || |||||||||||||||||||||||    
T  1822 cgtgtataaatcttaaacgactattatttagaga 1855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 8078 - 7944
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||| |||| |||||||||||||||||||| || |||| |||||| ||| ||||||||||||  |||| |||| |||||||||||| |||||||||    
T  8078 caacttaattactccactaactacaattaataagggtgttttggtaaataatattaattttaccatccaaatcaacaaaattaatcatttccttaataac 7979  T
Q  102 cgtacatcaaccttaaacgactattatttagagac 136  Q
    ||| |||||||| ||||||||||||||||||||||    
T  7978 cgtgcatcaaccgtaaacgactattatttagagac 7944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 2057 - 2177
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaacctt 115  Q
    ||||||||||||||||||||  | ||||||||||||||| |||||||| |||||||||||||| ||||||||| || |||||||| ||| ||| ||||||    
T  2057 cactaactacaattaataaggatgttttagtaaatgatattaattttatcattgaaattaacacaattaatcacttccttaataatcgtgcatgaacctt 2156  T
Q  116 aaacgactattatttagagac 136  Q
    |||||||| ||||||||||||    
T  2157 aaacgacttttatttagagac 2177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 136133 - 136007
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataacc 102  Q
    |||||||||||||||||||||| |||||||||| || |||||||||||| || |||||||||||||||||| ||||| |||||||||||  ||||||| |    
T  136133 aacttaactacttcactaactataattaataagggtgttttagtaaatgctattaattttaccattgaaatcaacattattaatcatttatttaataatc 136034  T
Q  103 gtacatcaaccttaaacgactattatt 129  Q
    || ||| || |||||||||||| ||||    
T  136033 gtgcataaatcttaaacgactaatatt 136007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 105701 - 105800
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||| | || |||||||||||||||||| |||| |||||||||||| ||||||||    
T  105701 tcaacttaactacttcactaactacaattaataagggtgttttagtaaacgctattaattttaccattgaaataaacacaattaatcatttacttaataa 105800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 5408 - 5541
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||||| ||||||||| ||||||||||  ||||||||||||||||| |||||||||||||||| | |||| | |||||||||||||||||||     
T  5408 caacttaactactccactaactaaaattaataaggatattttagtaaatgatattaattttaccattgaattcaacacagttaatcattttcttaataat 5507  T
Q  102 cgtacatcaaccttaaacgactattatttagaga 135  Q
    | |  |  |||||||||||| ||| |||||||||    
T  5508 catgtacaaaccttaaacgattataatttagaga 5541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 50221 - 50349
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||| |||| ||||||||  |||||||||   |||| ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||    
T  50221 tcaacttaattactccactaactgtaattaataaagatattatagtaaatgatactaattttatcattgaaattaacacaattaatcatttccttaataa 50320  T
Q  101 ccgtacatcaaccttaaacgactattatt 129  Q
     ||| ||  ||||||||||||||| ||||    
T  50321 tcgtgcacaaaccttaaacgactaatatt 50349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 22370 - 22438
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaatt 74  Q
    ||||||||| ||||||| || ||||||||   |||||||||||||||||||||||||| |||| |||||    
T  22370 ttaactactgcactaaccacgattaataaagatattttagtaaatgatactaattttagcattaaaatt 22438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 20450 - 20317
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||| ||  |||| |||| ||||||||||||  |||||||     
T  20450 caacttaactacttcactaactgcaattaataagggtattttactaaatgatactaattttacaatcaaaatcaacacaattaatcatttaattaataat 20351  T
Q  102 cgtacatcaaccttaaacgactattatttagaga 135  Q
    | | ||  | |||||||  |||||||||||||||    
T  20350 cttgcacaacccttaaagtactattatttagaga 20317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 34116 - 33989
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataac 101  Q
    ||||||||||| |||||||||||||||||||||| || ||||||||||||  ||||||||||| |||||| | || | |||||||||||| ||||||||     
T  34116 caacttaactatttcactaactacaattaataagggtgttttagtaaatgccactaattttactattgaattcaatacaattaatcatttccttaataat 34017  T
Q  102 cgtacatcaaccttaaacgactattatt 129  Q
    ||| ||  ||||||||| ||||| ||||    
T  34016 cgtgcacaaaccttaaatgactaatatt 33989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 17070 - 17180
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaa 118  Q
    |||||| |||||||||| || || || |||||| ||||||||||||||||||||| |||| ||||||||||||||||||||| | | ||  |||||||||    
T  17070 taactataattaataagggtgttctaataaatgctactaattttaccattgaaatcaacacaattaatcattttcttaataatcatgcacaaaccttaaa 17169  T
Q  119 cgactattatt 129  Q
    |||||| ||||    
T  17170 cgactaatatt 17180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 16119 - 16214
Alignment:
Q  5 cttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||| ||||| ||||||||||||||||| || |||||||||||| || |||||||| |||| |||| |||| |||||||||||| ||||||||    
T  16119 cttaactgcttcattaactacaattaataagtgtgttttagtaaatgctattaattttatcattaaaatcaacacaattaatcatttccttaataa 16214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 136
Target Start/End: Original strand, 39127 - 39240
Alignment:
Q  23 tacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgac 122  Q
    ||||||||||||   | |||||||||||||||||||||| | |||  |||| |||| |||||||||||| ||||||||  || ||  ||||||||||||     
T  39127 tacaattaataatgatgttttagtaaatgatactaatttcatcatcaaaatcaacacaattaatcatttccttaataattgtgcaaaaaccttaaacgat 39226  T
Q  123 tattatttagagac 136  Q
    ||||||||||||||    
T  39227 tattatttagagac 39240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 252575 - 252492
Alignment:
Q  53 tactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgactattatttagagac 136  Q
    |||||||||||||||| |||| |||||||||||||||||  ||||||| | |||   |||||||||||||||| ||||||||||    
T  252575 tactaattttaccattaaaatcaacataattaatcatttctttaataatcatacgcaaaccttaaacgactataatttagagac 252492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1391 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1391
Description:

Target: scaffold1391; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 133
Target Start/End: Complemental strand, 1897 - 1783
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaa 118  Q
    |||||| |||||||||  || ||||||||||||||| |||||| || ||  |||| |||| ||||||| ||||||||||||| ||| ||| ||| |||||    
T  1897 taactataattaataaaggtgttttagtaaatgatattaatttgactatcaaaatcaacacaattaattattttcttaataatcgtgcataaactttaaa 1798  T
Q  119 cgactattatttaga 133  Q
      |||||||||||||    
T  1797 gaactattatttaga 1783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0470 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 1055 - 1130
Alignment:
Q  54 actaattttaccattgaaattaacataattaatcattttcttaataaccgtacatcaaccttaaacgactattatt 129  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| |||   | || |||||||||||| ||||    
T  1055 actaattttaccattgaaatcaacataattaatcatttttttaataatcgtgtgtaaatcttaaacgactaatatt 1130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 767 - 697
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaat 86  Q
    ||||||||||||| |||||  || |||||||||||| || |||||||||||||||||| |||| |||||||    
T  767 cactaactacaatcaataaaggtgttttagtaaatgctattaattttaccattgaaatcaacacaattaat 697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 6792 - 6850
Alignment:
Q  39 attttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||||||| |||||||||||| |||||||||||| | |||||||||||| |||||    
T  6792 attttagtaaataatactaattttatcattgaaattaaaacaattaatcatttccttaa 6850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 12041 - 12114
Alignment:
Q  27 attaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||| ||||||||||||||||  ||||| ||||| |||| ||||| | ||||||||| ||||||||    
T  12041 attaataagagtgttttagtaaatgatacacattttgccattaaaatcaacatcagtaatcatttccttaataa 12114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 126194 - 126287
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||| ||||||||||| |||||| || ||| ||||||||||||||||  |||||  |||| |||| ||||  ||||||||||| ||||||||    
T  126194 taactatttcactaactataattaacaacagtcttttagtaaatgatacacattttgtcattaaaataaacactattaatcatttccttaataa 126287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2146 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold2146
Description:

Target: scaffold2146; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 437 - 494
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaat 73  Q
    |||||||||| ||||||||| || ||||| | |||||||||||||||| |||| ||||    
T  437 cactaactactattaataagggtgttttattgaatgatactaattttaacattaaaat 494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 42897 - 42969
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaa 76  Q
    |||||| || |||||||| || ||||||||||| | |||||| |||  ||| ||||||||| |||||||||||    
T  42897 acttaattatttcactaattataattaataagaatgttttagcaaaatatattaattttactattgaaattaa 42969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University