View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15057_high_5 (Length: 332)
Name: NF15057_high_5
Description: NF15057
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15057_high_5 |
 | |
|
| [»] scaffold0129 (1 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 295; Significance: 1e-166; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 9 - 323
Target Start/End: Original strand, 23717240 - 23717554
Alignment:
| Q |
9 |
acatcatcagacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
108 |
Q |
| |
|
|||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23717240 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
23717339 |
T |
|
| Q |
109 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcata |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
23717340 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
23717439 |
T |
|
| Q |
209 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgctta |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
23717440 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctcttcccttttctatttcagcagagagatagtcatttgaccgctta |
23717539 |
T |
|
| Q |
309 |
agtgtgtttgatatt |
323 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
23717540 |
agtgtgtttgatatt |
23717554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 9 - 323
Target Start/End: Original strand, 32742219 - 32742533
Alignment:
| Q |
9 |
acatcatcagacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
108 |
Q |
| |
|
|||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32742219 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
32742318 |
T |
|
| Q |
109 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcata |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
32742319 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
32742418 |
T |
|
| Q |
209 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgctta |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
32742419 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctcttcccttttctatttcagcagagagatagtcatttgaccgctta |
32742518 |
T |
|
| Q |
309 |
agtgtgtttgatatt |
323 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
32742519 |
agtgtgtttgatatt |
32742533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 9 - 323
Target Start/End: Complemental strand, 35216631 - 35216317
Alignment:
| Q |
9 |
acatcatcagacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
108 |
Q |
| |
|
|||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35216631 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
35216532 |
T |
|
| Q |
109 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcata |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
35216531 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
35216432 |
T |
|
| Q |
209 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgctta |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
35216431 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctcttcccttttctatttcagcagagagatagtcatttgaccgctta |
35216332 |
T |
|
| Q |
309 |
agtgtgtttgatatt |
323 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
35216331 |
agtgtgtttgatatt |
35216317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 9 - 323
Target Start/End: Complemental strand, 38223387 - 38223073
Alignment:
| Q |
9 |
acatcatcagacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
108 |
Q |
| |
|
|||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38223387 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
38223288 |
T |
|
| Q |
109 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcata |
208 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
38223287 |
catcatgagggtacaagagtttcgttgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
38223188 |
T |
|
| Q |
209 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgctta |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
38223187 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctcttcccttttctatttcagcagagagatagtcatttgaccgctta |
38223088 |
T |
|
| Q |
309 |
agtgtgtttgatatt |
323 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
38223087 |
agtgtgtttgatatt |
38223073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 9 - 323
Target Start/End: Original strand, 9313562 - 9313876
Alignment:
| Q |
9 |
acatcatcagacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
108 |
Q |
| |
|
|||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9313562 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcagtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
9313661 |
T |
|
| Q |
109 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcata |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
9313662 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctatgatattcacacgttcttgatgctgtagaaaccactcata |
9313761 |
T |
|
| Q |
209 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgctta |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
9313762 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctcttcccttttctatttcagcagagagatagtcatttgaccgctta |
9313861 |
T |
|
| Q |
309 |
agtgtgtttgatatt |
323 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
9313862 |
agtgtgtttgatatt |
9313876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 9 - 323
Target Start/End: Complemental strand, 42989167 - 42988853
Alignment:
| Q |
9 |
acatcatcagacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
108 |
Q |
| |
|
|||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42989167 |
acatcaacagactcactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
42989068 |
T |
|
| Q |
109 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcata |
208 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
42989067 |
catcatgagggtacagaagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
42988968 |
T |
|
| Q |
209 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgctta |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||| |
|
|
| T |
42988967 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctcttcccttttctatttcagcagagagatagtcatttgactgctta |
42988868 |
T |
|
| Q |
309 |
agtgtgtttgatatt |
323 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
42988867 |
agtgtgtttgatatt |
42988853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 295; Significance: 1e-166; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 9 - 323
Target Start/End: Complemental strand, 3522887 - 3522573
Alignment:
| Q |
9 |
acatcatcagacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
108 |
Q |
| |
|
|||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3522887 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
3522788 |
T |
|
| Q |
109 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcata |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
3522787 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
3522688 |
T |
|
| Q |
209 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgctta |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
3522687 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctcttcccttttctatttcagcagagagatagtcatttgaccgctta |
3522588 |
T |
|
| Q |
309 |
agtgtgtttgatatt |
323 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
3522587 |
agtgtgtttgatatt |
3522573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 9 - 323
Target Start/End: Original strand, 10269208 - 10269522
Alignment:
| Q |
9 |
acatcatcagacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
108 |
Q |
| |
|
|||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10269208 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
10269307 |
T |
|
| Q |
109 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcata |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
10269308 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
10269407 |
T |
|
| Q |
209 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgctta |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
10269408 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctcttcccttttctatttcagcagagagatagtcatttgaccgctta |
10269507 |
T |
|
| Q |
309 |
agtgtgtttgatatt |
323 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
10269508 |
agtgtgtttgatatt |
10269522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 9 - 323
Target Start/End: Complemental strand, 335776 - 335462
Alignment:
| Q |
9 |
acatcatcagacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
108 |
Q |
| |
|
|||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
335776 |
acatcaacatacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
335677 |
T |
|
| Q |
109 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcata |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
335676 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
335577 |
T |
|
| Q |
209 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgctta |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
335576 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctcttcccttttctatttcagcagagagatagtcatttgaccgctta |
335477 |
T |
|
| Q |
309 |
agtgtgtttgatatt |
323 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
335476 |
agtgtgtttgatatt |
335462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 295; Significance: 1e-166; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 9 - 323
Target Start/End: Complemental strand, 14219188 - 14218874
Alignment:
| Q |
9 |
acatcatcagacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
108 |
Q |
| |
|
|||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14219188 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
14219089 |
T |
|
| Q |
109 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcata |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
14219088 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
14218989 |
T |
|
| Q |
209 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgctta |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
14218988 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctcttcccttttctatttcagcagagagatagtcatttgaccgctta |
14218889 |
T |
|
| Q |
309 |
agtgtgtttgatatt |
323 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
14218888 |
agtgtgtttgatatt |
14218874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 9 - 323
Target Start/End: Original strand, 30704105 - 30704419
Alignment:
| Q |
9 |
acatcatcagacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
108 |
Q |
| |
|
|||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
30704105 |
acatcaacagacccactctcgccaaaacgatgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcatgtagagaagttaaaatctgaat |
30704204 |
T |
|
| Q |
109 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcata |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
30704205 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
30704304 |
T |
|
| Q |
209 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgctta |
308 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
30704305 |
aacaaccttctccatgtcaggatattttgttggtttgtgtcttttgatctccgctcttcccttttctatttcagcagagagatagtcatttgaccgctta |
30704404 |
T |
|
| Q |
309 |
agtgtgtttgatatt |
323 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
30704405 |
agtgtgtttgatatt |
30704419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 295; Significance: 1e-166; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 9 - 323
Target Start/End: Complemental strand, 14677355 - 14677041
Alignment:
| Q |
9 |
acatcatcagacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
108 |
Q |
| |
|
|||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14677355 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
14677256 |
T |
|
| Q |
109 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcata |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
14677255 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
14677156 |
T |
|
| Q |
209 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgctta |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
14677155 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctcttcccttttctatttcagcagagagatagtcatttgaccgctta |
14677056 |
T |
|
| Q |
309 |
agtgtgtttgatatt |
323 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
14677055 |
agtgtgtttgatatt |
14677041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 9 - 323
Target Start/End: Complemental strand, 45107114 - 45106800
Alignment:
| Q |
9 |
acatcatcagacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
108 |
Q |
| |
|
|||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45107114 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
45107015 |
T |
|
| Q |
109 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcata |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
45107014 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
45106915 |
T |
|
| Q |
209 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgctta |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
45106914 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctcttcccttttctatttcagcagagagatagtcatttgaccgctta |
45106815 |
T |
|
| Q |
309 |
agtgtgtttgatatt |
323 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
45106814 |
agtgtgtttgatatt |
45106800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 9 - 323
Target Start/End: Original strand, 1085593 - 1085907
Alignment:
| Q |
9 |
acatcatcagacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
108 |
Q |
| |
|
|||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1085593 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
1085692 |
T |
|
| Q |
109 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcata |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
1085693 |
catcatgagggtacaagagtttcattgtatctcttgccttctacaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
1085792 |
T |
|
| Q |
209 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgctta |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
1085793 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctcttcccttttctatttcagcagagagatagtcatttgaccgctta |
1085892 |
T |
|
| Q |
309 |
agtgtgtttgatatt |
323 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
1085893 |
agtgtgtttgatatt |
1085907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 20 - 323
Target Start/End: Complemental strand, 21395911 - 21395608
Alignment:
| Q |
20 |
cccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgaggg |
119 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21395911 |
cccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgaggg |
21395812 |
T |
|
| Q |
120 |
tacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcataaacaaccttct |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21395811 |
tacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttct |
21395712 |
T |
|
| Q |
220 |
ccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgcttaagtgtgtttga |
319 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21395711 |
ccatgtcaggatattttgctggtttgtgtcttttgatctccgctcttcccttttctatttcagcagagagatagtcatttgaccgcttaagtgtgtttga |
21395612 |
T |
|
| Q |
320 |
tatt |
323 |
Q |
| |
|
|||| |
|
|
| T |
21395611 |
tatt |
21395608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 9 - 323
Target Start/End: Original strand, 17195378 - 17195692
Alignment:
| Q |
9 |
acatcatcagacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
108 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
17195378 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtacagaagttaaaatctgaat |
17195477 |
T |
|
| Q |
109 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcata |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
17195478 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
17195577 |
T |
|
| Q |
209 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgctta |
308 |
Q |
| |
|
||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
17195578 |
aacaaccttctccatatcaggatattttgcttgtttgtgtcttttgatctccgctcttcccttttctatttcagcagagagatagtcatttgaccgctta |
17195677 |
T |
|
| Q |
309 |
agtgtgtttgatatt |
323 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
17195678 |
agtgtgtttgatatt |
17195692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 9 - 323
Target Start/End: Complemental strand, 10485669 - 10485355
Alignment:
| Q |
9 |
acatcatcagacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
108 |
Q |
| |
|
|||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
10485669 |
acatcaacagacccactctcgccaaaatgacgaaatgactttatgccatgtcggtgcttgaatttcccaagtcatcctgtagagaagttaaaatctgaat |
10485570 |
T |
|
| Q |
109 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcata |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |
|
|
| T |
10485569 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtaaaaaccactcata |
10485470 |
T |
|
| Q |
209 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgctta |
308 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||| |
|
|
| T |
10485469 |
aacaaccttctccacgtcaggatattttgctggtttgtgtcttttgatctccgctcttcccttttctatttcagcagagagatagtcatttaaccgctta |
10485370 |
T |
|
| Q |
309 |
agtgtgtttgatatt |
323 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
10485369 |
agtgtgtttgatatt |
10485355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 17 - 323
Target Start/End: Original strand, 49550103 - 49550409
Alignment:
| Q |
17 |
agacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatga |
116 |
Q |
| |
|
||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49550103 |
agacccactctcgccaaaaggatgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatga |
49550202 |
T |
|
| Q |
117 |
gggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcataaacaacct |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
49550203 |
gggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaacct |
49550302 |
T |
|
| Q |
217 |
tctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgcttaagtgtgtt |
316 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||| ||| ||||||||||||||||||| ||||||||||||| |
|
|
| T |
49550303 |
tctccatgtcaggatattttattggtttgtgtcttttgatctccgctcttcccttttctattccagtagagagatagtcatttgactgcttaagtgtgtt |
49550402 |
T |
|
| Q |
317 |
tgatatt |
323 |
Q |
| |
|
||||||| |
|
|
| T |
49550403 |
tgatatt |
49550409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 131 - 323
Target Start/End: Complemental strand, 5926651 - 5926459
Alignment:
| Q |
131 |
cattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcataaacaaccttctccatgtcagga |
230 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5926651 |
cattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttctccatgtcagga |
5926552 |
T |
|
| Q |
231 |
tattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgcttaagtgtgtttgatatt |
323 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5926551 |
tattttgctggtttgtgtcttttgatctccgctcttctcttttctatttcagcagagagatagtcatttgaccgcttaagtgtgtttgatatt |
5926459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 131 - 323
Target Start/End: Original strand, 27182471 - 27182663
Alignment:
| Q |
131 |
cattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcataaacaaccttctccatgtcagga |
230 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27182471 |
cattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttctccatgtcagga |
27182570 |
T |
|
| Q |
231 |
tattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgcttaagtgtgtttgatatt |
323 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27182571 |
tattttgctggtttgtgtcttttgatctccgctcttctcttttctatttcagcagagagatagtcatttgaccgcttaagtgtgtttgatatt |
27182663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 295; Significance: 1e-166; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 9 - 323
Target Start/End: Original strand, 44553301 - 44553615
Alignment:
| Q |
9 |
acatcatcagacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
108 |
Q |
| |
|
|||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44553301 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
44553400 |
T |
|
| Q |
109 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcata |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
44553401 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
44553500 |
T |
|
| Q |
209 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgctta |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
44553501 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctcttcccttttctatttcagcagagagatagtcatttgaccgctta |
44553600 |
T |
|
| Q |
309 |
agtgtgtttgatatt |
323 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
44553601 |
agtgtgtttgatatt |
44553615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 9 - 323
Target Start/End: Original strand, 38518163 - 38518477
Alignment:
| Q |
9 |
acatcatcagacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
108 |
Q |
| |
|
|||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38518163 |
acatcaacagacccactctcgccaaaatgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
38518262 |
T |
|
| Q |
109 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcata |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
38518263 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
38518362 |
T |
|
| Q |
209 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgctta |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
38518363 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctcttcccttttctatttcagtagagagatagtcatttgaccgctta |
38518462 |
T |
|
| Q |
309 |
agtgtgtttgatatt |
323 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
38518463 |
agtgtgtttgatatt |
38518477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 9 - 323
Target Start/End: Complemental strand, 34945789 - 34945475
Alignment:
| Q |
9 |
acatcatcagacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
108 |
Q |
| |
|
|||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34945789 |
acatcaacagacccactctcgccaaaatgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
34945690 |
T |
|
| Q |
109 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcata |
208 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
34945689 |
catcatgagggtgcaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgttgtagaaaccactcata |
34945590 |
T |
|
| Q |
209 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgctta |
308 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
34945589 |
aacaacattctccatgtcaggatattttgctggtttgtgtcttttgatctccgctcttcccttttctatttcagcagagagatagtcatttgaccgctta |
34945490 |
T |
|
| Q |
309 |
agtgtgtttgatatt |
323 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
34945489 |
agtgtgtttgatatt |
34945475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 114 - 323
Target Start/End: Original strand, 27644504 - 27644713
Alignment:
| Q |
114 |
tgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcataaacaa |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
27644504 |
tgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtaatattcacacgttcttgatgctgtagaaaccactcataaacaa |
27644603 |
T |
|
| Q |
214 |
ccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgcttaagtgt |
313 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
27644604 |
ccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctcttcccttttctatttcaacagagagatagtcatttgaccgcttaagtgt |
27644703 |
T |
|
| Q |
314 |
gtttgatatt |
323 |
Q |
| |
|
|||||||||| |
|
|
| T |
27644704 |
gtttgatatt |
27644713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 129 - 323
Target Start/End: Complemental strand, 20394982 - 20394788
Alignment:
| Q |
129 |
ttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcataaacaaccttctccatgtcag |
228 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20394982 |
ttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttctccatgtcag |
20394883 |
T |
|
| Q |
229 |
gatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgcttaagtgtgtttgatatt |
323 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
20394882 |
gatattttgctggtttgtgtcttttgatctccgctcttcccttttctatttcagcagagagatagtcatttgaccgcttaagtgtgtttgttatt |
20394788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 295; Significance: 1e-166; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 9 - 323
Target Start/End: Original strand, 16641825 - 16642139
Alignment:
| Q |
9 |
acatcatcagacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
108 |
Q |
| |
|
|||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16641825 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
16641924 |
T |
|
| Q |
109 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcata |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
16641925 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
16642024 |
T |
|
| Q |
209 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgctta |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
16642025 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctcttcccttttctatttcagcagagagatagtcatttgaccgctta |
16642124 |
T |
|
| Q |
309 |
agtgtgtttgatatt |
323 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
16642125 |
agtgtgtttgatatt |
16642139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 9 - 323
Target Start/End: Complemental strand, 41774128 - 41773814
Alignment:
| Q |
9 |
acatcatcagacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
108 |
Q |
| |
|
|||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41774128 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
41774029 |
T |
|
| Q |
109 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcata |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
41774028 |
catcatgagggtacaagagtttcattgtatctcttgccttctacaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
41773929 |
T |
|
| Q |
209 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgctta |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
41773928 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctcttcccttttctatttcagcagagagatagtcatttgaccgctta |
41773829 |
T |
|
| Q |
309 |
agtgtgtttgatatt |
323 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
41773828 |
agtgtgtttgatatt |
41773814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 291; Significance: 1e-163; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 9 - 323
Target Start/End: Complemental strand, 2026895 - 2026581
Alignment:
| Q |
9 |
acatcatcagacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
108 |
Q |
| |
|
|||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2026895 |
acatcaacagacccactctcgacaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
2026796 |
T |
|
| Q |
109 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcata |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
2026795 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
2026696 |
T |
|
| Q |
209 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgctta |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
2026695 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctcttcccttttctatttcagcagagagatagtcatttgaccgctta |
2026596 |
T |
|
| Q |
309 |
agtgtgtttgatatt |
323 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
2026595 |
agtgtgtttgatatt |
2026581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 9 - 323
Target Start/End: Original strand, 37038760 - 37039074
Alignment:
| Q |
9 |
acatcatcagacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
108 |
Q |
| |
|
|||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37038760 |
acatcaacagacccactctcgtcaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
37038859 |
T |
|
| Q |
109 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcata |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
37038860 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
37038959 |
T |
|
| Q |
209 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgctta |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
37038960 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctcttcccttttctatttcagcagagagatagtcatttgaccgctta |
37039059 |
T |
|
| Q |
309 |
agtgtgtttgatatt |
323 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
37039060 |
agtgtgtttgatatt |
37039074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 9 - 323
Target Start/End: Complemental strand, 43488288 - 43487974
Alignment:
| Q |
9 |
acatcatcagacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
108 |
Q |
| |
|
|||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43488288 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
43488189 |
T |
|
| Q |
109 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcata |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
43488188 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
43488089 |
T |
|
| Q |
209 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgctta |
308 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
43488088 |
aacaactttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctcttcccttttctatttcagcagagagatagtcatttgaccgctta |
43487989 |
T |
|
| Q |
309 |
agtgtgtttgatatt |
323 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
43487988 |
agtgtgtttgatatt |
43487974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 9 - 323
Target Start/End: Complemental strand, 3615504 - 3615190
Alignment:
| Q |
9 |
acatcatcagacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
108 |
Q |
| |
|
|||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3615504 |
acatcaacagacccactctcgtcaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
3615405 |
T |
|
| Q |
109 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcata |
208 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
3615404 |
catcatgagggtataagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgttgtagaaaccactcata |
3615305 |
T |
|
| Q |
209 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgctta |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
3615304 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctcttcccttttctatttcagcagagagatagtcatttgaccactta |
3615205 |
T |
|
| Q |
309 |
agtgtgtttgatatt |
323 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
3615204 |
agtgtgtttgatatt |
3615190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 9 - 323
Target Start/End: Complemental strand, 23415881 - 23415567
Alignment:
| Q |
9 |
acatcatcagacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
108 |
Q |
| |
|
|||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23415881 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
23415782 |
T |
|
| Q |
109 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcata |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |
|
|
| T |
23415781 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgaaattcacacgttcttgatgctgtagaaaccactcata |
23415682 |
T |
|
| Q |
209 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgctta |
308 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
23415681 |
aacaaccttctccatgtcaggatattttactggtttgtgtcttttgatctccgctcttcccatttctatttcagcagagagataatcatttgaccgctta |
23415582 |
T |
|
| Q |
309 |
agtgtgtttgatatt |
323 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
23415581 |
agtgtgtttgatatt |
23415567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 291; Significance: 1e-163; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 9 - 323
Target Start/End: Complemental strand, 2272800 - 2272486
Alignment:
| Q |
9 |
acatcatcagacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
108 |
Q |
| |
|
|||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2272800 |
acatcaacatacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
2272701 |
T |
|
| Q |
109 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcata |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
2272700 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
2272601 |
T |
|
| Q |
209 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgctta |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
2272600 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctcttcccttttctatttcagcagagagatagtcatttgaccgctta |
2272501 |
T |
|
| Q |
309 |
agtgtgtttgatatt |
323 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
2272500 |
agtgtgtttgatatt |
2272486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 9 - 323
Target Start/End: Complemental strand, 3535114 - 3534800
Alignment:
| Q |
9 |
acatcatcagacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
108 |
Q |
| |
|
|||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3535114 |
acatcaacagacccactctcgccaaaacgacgaaataactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
3535015 |
T |
|
| Q |
109 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcata |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
3535014 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
3534915 |
T |
|
| Q |
209 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgctta |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
3534914 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctcttcccctttctatttcagcagagagatagtcatttgaccgctta |
3534815 |
T |
|
| Q |
309 |
agtgtgtttgatatt |
323 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
3534814 |
agtgtgtttgatatt |
3534800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 9 - 323
Target Start/End: Complemental strand, 12533175 - 12532860
Alignment:
| Q |
9 |
acatcatcagacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
108 |
Q |
| |
|
|||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12533175 |
acatcaacagacccactctcgccaaaatgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
12533076 |
T |
|
| Q |
109 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcata |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
12533075 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
12532976 |
T |
|
| Q |
209 |
aacaaccttctccatgtcaggatattttgctgg-tttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgctt |
307 |
Q |
| |
|
|||||| |||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
12532975 |
aacaacattctccttgtcaggatattttgctggttttgtgtcttttgatctccgctcttcccttttctatttcagcagagagatagtcatttgaccgctt |
12532876 |
T |
|
| Q |
308 |
aagtgtgtttgatatt |
323 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
12532875 |
aagtgtgtttgatatt |
12532860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 9 - 323
Target Start/End: Original strand, 7356517 - 7356828
Alignment:
| Q |
9 |
acatcatcagacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
108 |
Q |
| |
|
|||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
7356517 |
acatcaacaaacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatt-cccaagccatcctgtagagaagttaaaatctgaat |
7356615 |
T |
|
| Q |
109 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcata |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |
|
|
| T |
7356616 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactc--a |
7356713 |
T |
|
| Q |
209 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgctta |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||| | |||| |
|
|
| T |
7356714 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctcttcccttttctatttccgcagagagatagtcatttgatcactta |
7356813 |
T |
|
| Q |
309 |
agtgtgtttgatatt |
323 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
7356814 |
agtgtgtttgatatt |
7356828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0129 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: scaffold0129
Description:
Target: scaffold0129; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 17 - 323
Target Start/End: Original strand, 39078 - 39384
Alignment:
| Q |
17 |
agacccactttcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatga |
116 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
39078 |
agacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcatgtagagaagttaaaatctgaatcatcatga |
39177 |
T |
|
| Q |
117 |
gggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacatgttcttgatgctgtagaaaccactcataaacaacct |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
39178 |
gggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaacct |
39277 |
T |
|
| Q |
217 |
tctccatgtcaggatattttgctggtttgtgtcttttgatctccgcgcttcccttttttatttcagcagagagatagtcatttgaccgcttaagtgtgtt |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39278 |
tctccatgtcaggatattttgctggtttgtgtcttttgatctccgctcttcccttttctatttcagcagagagatagtcatttgaccgcttaagtgtgtt |
39377 |
T |
|
| Q |
317 |
tgatatt |
323 |
Q |
| |
|
||||||| |
|
|
| T |
39378 |
tgatatt |
39384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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