View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1505_high_55 (Length: 201)
Name: NF1505_high_55
Description: NF1505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1505_high_55 |
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Alignment Details
Target: chr7 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 15 - 183
Target Start/End: Complemental strand, 13114921 - 13114753
Alignment:
| Q |
15 |
caaagggcttaggtttagaattggcggcattataaccttttgaagattactcgacctatggtccattttacttggcgcagttgacaagtatatggcgtgg |
114 |
Q |
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| T |
13114921 |
caaagggcttaggtttagaattggctgcattataaccttttgaagattactcgacctatggtccattttactcggcgcagttgacaagtatatggcgtgg |
13114822 |
T |
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| Q |
115 |
agtcatatgatatgggtcgagaaggatctggataaaaatggggctgggcccaaaaatccctcaccaaag |
183 |
Q |
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| T |
13114821 |
agtcatatgatatgggtcgagaaggatctggataaaaatggggctgggcccaaaaattcctcaccaaag |
13114753 |
T |
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