View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1505_low_16 (Length: 373)

Name: NF1505_low_16
Description: NF1505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1505_low_16
NF1505_low_16
[»] chr7 (3 HSPs)
chr7 (1-360)||(11240843-11241199)
chr7 (123-362)||(14999437-14999674)
chr7 (133-362)||(24070789-24071015)
[»] chr5 (4 HSPs)
chr5 (102-362)||(19410367-19410626)
chr5 (195-294)||(19568257-19568356)
chr5 (144-231)||(14492096-14492181)
chr5 (210-279)||(25011001-25011071)
[»] chr2 (4 HSPs)
chr2 (207-351)||(43937239-43937384)
chr2 (176-362)||(9959837-9960021)
chr2 (238-301)||(4111326-4111389)
chr2 (249-294)||(15781368-15781413)
[»] chr1 (2 HSPs)
chr1 (141-362)||(3255316-3255541)
chr1 (254-284)||(15889158-15889188)
[»] scaffold0002 (1 HSPs)
scaffold0002 (177-294)||(368641-368759)
[»] chr3 (2 HSPs)
chr3 (190-283)||(2286736-2286833)
chr3 (238-298)||(5699375-5699435)
[»] scaffold0300 (1 HSPs)
scaffold0300 (207-284)||(14695-14773)
[»] chr4 (4 HSPs)
chr4 (1-79)||(20879726-20879803)
chr4 (190-298)||(20880209-20880316)
chr4 (244-283)||(34645327-34645366)
chr4 (90-195)||(20879857-20879961)
[»] chr8 (2 HSPs)
chr8 (176-283)||(29318542-29318653)
chr8 (255-283)||(26837349-26837377)
[»] chr6 (1 HSPs)
chr6 (253-283)||(21933360-21933390)


Alignment Details
Target: chr7 (Bit Score: 248; Significance: 1e-137; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 1 - 360
Target Start/End: Complemental strand, 11241199 - 11240843
Alignment:
Q  1 taattcgtattatgatcaaggtgccacatcattaaaactataaacattcaaagtacatttttcatctaagtttctcaacttcatgatccaatctcctaat 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11241199 taattcgtattatgatcaaggtgccacatcattaaaactgtaaacattcaaagtacatttttcatctaagtttctcaacttcataatccaatctcctaat 11241100  T
Q  101 acattaaactaaaccaacaaggtctccatataaatccaacatagaatataaagaaaacaactcccgaaaagatcataatcagagcctagactagactcca 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||| |    
T  11241099 acattgaactaaaccaacaaggtctccatataaatccaacatagaatataaacaaaacaactccc-aaaagatcctaatcagagcctagactagactcaa 11241001  T
Q  201 aagcaaaagaaaatgaggaagcgtcaagctagttctcggtacacacgtcgtctcaagcgtcctcaacctgcacgtctacaccattttacaatggtgagac 300  Q
    |||| ||||||||||||||||| |||||||| | | || ||| |||| || |||||||||||||||| || ||||||||||||||||||||||| |||      
T  11241000 aagc-aaagaaaatgaggaagcctcaagctaatccccgatactcacgccgactcaagcgtcctcaacttggacgtctacaccattttacaatggcgaggt 11240902  T
Q  301 gaccaaaagtcattggagggtaagtttgcattcaacattaagaaattacgaattcaagta 360  Q
    || ||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||    
T  11240901 ga-caaaagtcactggagggtaagtttacattcaacattaagaaactacgaattcaagta 11240843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 123 - 362
Target Start/End: Original strand, 14999437 - 14999674
Alignment:
Q  123 tctccatataaatccaacatagaatataaagaaaacaactcccgaaaagatcataatcagagcctagactagactccaaagcaaaagaaaatgaggaagc 222  Q
    ||||||||||| || ||||||||||||||| |||| | ||| | ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  14999437 tctccatataattctaacatagaatataaataaaatatctctc-aaaagatcataatcagagcctagactaaactccaaagcaaaagaaaatggggaagc 14999535  T
Q  223 gtcaagctagttctcggtacacacgtcgtctcaagcgtcctcaacctgcacgtctacaccattttacaatggtgagacgaccaaaagtcattggagggta 322  Q
     |||||| | |  || |||| |||  ||||||||||||||||||||| |||||||||||||||||||||||  ||  ||| ||||| ||| | || ||||    
T  14999536 ctcaagcaaatcttcagtactcactccgtctcaagcgtcctcaacctacacgtctacaccattttacaatgacgaagcga-caaaaatcactagacggta 14999634  T
Q  323 agtttgcattcaacattaagaaattacgaattcaagtata 362  Q
    ||||| ||||||||||||||||| || |||||||||||||    
T  14999635 agtttacattcaacattaagaaactatgaattcaagtata 14999674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 133 - 362
Target Start/End: Complemental strand, 24071015 - 24070789
Alignment:
Q  133 aatccaacatagaatataaagaaaacaactcccgaaaagatcataatcagagcctagactagactccaaagcaaaagaaaatgaggaagcgtcaagctag 232  Q
    |||||||||||||||||||| |||| |||||  ||||||||| |||||||||| ||||||||||||||||||| | |||||||| ||| | ||||||||     
T  24071015 aatccaacatagaatataaataaaataactct-gaaaagatcctaatcagagcttagactagactccaaagcaca-gaaaatgaagaatcctcaagctaa 24070918  T
Q  233 ttctcggtacacacgtcgtctcaagcgtcctcaacctgcacgtctacaccattttacaatggtgagacgaccaaaagtcattggagggtaagtttgcatt 332  Q
    | ||||  || |||  |||||||||||||||| |||||||||||||||| |||||||||||| ||| ||  ||||| ||| | |||||||||||| ||||    
T  24070917 tcctcgaaactcactccgtctcaagcgtcctccacctgcacgtctacactattttacaatggcgaggcg-gcaaaactcactagagggtaagtttccatt 24070819  T
Q  333 caacattaagaaattacgaattcaagtata 362  Q
    ||||||||||||| || |||||||||||||    
T  24070818 caacattaagaaactaagaattcaagtata 24070789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 134; Significance: 1e-69; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 102 - 362
Target Start/End: Complemental strand, 19410626 - 19410367
Alignment:
Q  102 cattaaactaaaccaacaaggtctccatataaatccaacatagaatataaagaaaacaactcccgaaaagatcataatcagagcctagactagactccaa 201  Q
    |||||||||||| |||||||||||||||||||||||| ||||| ||||||| |||| ||||||| |||||||| |||||| ||||||||||||| |||||    
T  19410626 cattaaactaaagcaacaaggtctccatataaatccagcatagcatataaataaaataactccc-aaaagatcctaatcatagcctagactagaatccaa 19410528  T
Q  202 agcaaaagaaaatgaggaagcgtcaagctagttctcggtacacacgtcgtctcaagcgtcctcaacctgcacgtctacacca-ttttacaatggtgagac 300  Q
    |  ||||||||| |||||||| |||||||| | ||||  || |||  | ||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  19410527 aagaaaagaaaacgaggaagcctcaagctaatcctcgaaactcactccatctcaagcgtcctcaacctgcacgtctacaccatttttacaatggtgaggc 19410428  T
Q  301 gaccaaaagtcattggagggtaagtttgcattcaacattaagaaattacgaattcaagtata 362  Q
    || ||||||||| |||||||||| ||| ||||||||||||||||| ||| ||||||||||||    
T  19410427 ga-caaaagtcactggagggtaaatttacattcaacattaagaaactacaaattcaagtata 19410367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 195 - 294
Target Start/End: Complemental strand, 19568356 - 19568257
Alignment:
Q  195 actccaaagcaaaagaaaatgaggaagcgtcaagctagttctcggtacacacgtcgtctcaagcgtcctcaacctgcacgtctacaccattttacaatgg 294  Q
    ||||||||  ||||||||| |||||||| ||||||||   |||| ||| ||| |||||||||||  | |||||||||| |||||||||||||||||||||    
T  19568356 actccaaaagaaaagaaaaggaggaagcctcaagctatccctcgatactcacatcgtctcaagcaccttcaacctgcatgtctacaccattttacaatgg 19568257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 231
Target Start/End: Original strand, 14492096 - 14492181
Alignment:
Q  144 gaatataaagaaaacaactcccgaaaagatcataatcagagcctagactagactccaaagcaaaagaaaatgaggaagcgtcaagcta 231  Q
    ||||||||| |||| ||||||| |||||||| |||| |||||||||| ||||||||||| | ||||||||| ||||||  ||||||||    
T  14492096 gaatataaataaaataactccc-aaaagatcctaataagagcctagaatagactccaaaac-aaagaaaataaggaagtctcaagcta 14492181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 279
Target Start/End: Original strand, 25011001 - 25011071
Alignment:
Q  210 aaaatgaggaagcgtcaagctagttctc-ggtacacacgtcgtctcaagcgtcctcaacctgcacgtctac 279  Q
    |||||||||||| ||||||||| | | | ||||| |||| ||| |||||||||||||||||||| ||||||    
T  25011001 aaaatgaggaagtgtcaagctaatccacaggtactcacgccgtttcaagcgtcctcaacctgcaagtctac 25011071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 2e-31; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 207 - 351
Target Start/End: Original strand, 43937239 - 43937384
Alignment:
Q  207 aagaaaatgaggaagcgtcaagctagttctcggtacacacgtcgtctcaagcgtcctcaacctgcacgtctacaccattttacaatggtgagacgacc-a 305  Q
    ||||||||||||||||||||||||||| |||||||| ||||  | |||||||||||| ||||||||| ||||||||||||||||||||| || ||||| |    
T  43937239 aagaaaatgaggaagcgtcaagctagtcctcggtactcacgcggactcaagcgtccttaacctgcacctctacaccattttacaatggtaaggcgaccaa 43937338  T
Q  306 aaagtcattggagggtaagtttgcattcaacattaagaaattacga 351  Q
    |||  || |||| |||||| || |||||||||| |||||| |||||    
T  43937339 aaaaccactggatggtaagattacattcaacataaagaaactacga 43937384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 176 - 362
Target Start/End: Original strand, 9959837 - 9960021
Alignment:
Q  176 taatcagagcctagactagactccaaagcaaaagaaaatgaggaagcgtcaagctagttctcggtacacacgtcgtctcaagcgtcctcaacctgcacgt 275  Q
    |||| ||||||||||||| | ||||||   ||||||||||||||||| ||||||||      || || ||||||||||||||| ||||| ||||||||||    
T  9959837 taattagagcctagactataatccaaaagcaaagaaaatgaggaagcctcaagctaaactatggaactcacgtcgtctcaagcatcctctacctgcacgt 9959936  T
Q  276 ctacaccattttacaatggtgagacgaccaaaagtcattggagggtaagtttgcattcaacattaagaaattacgaattcaagtata 362  Q
    |||||| |||||||||||||||  | ||  ||||||| | |||| ||||||| ||||||||||||||||| || |||||||||||||    
T  9959937 ctacacaattttacaatggtgatgcaac--aaagtcacttgaggataagtttacattcaacattaagaaactatgaattcaagtata 9960021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 4111389 - 4111326
Alignment:
Q  238 ggtacacacgtcgtctcaagcgtcctcaacctgcacgtctacaccattttacaatggtgagacg 301  Q
    ||||| ||| |||| ||||||||||| | ||||||||||||||||||||| |||||||||||||    
T  4111389 ggtacgcacatcgtttcaagcgtcctgatcctgcacgtctacaccatttttcaatggtgagacg 4111326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 15781413 - 15781368
Alignment:
Q  249 cgtctcaagcgtcctcaacctgcacgtctacaccattttacaatgg 294  Q
    |||||||||||| |||||||||||| | ||||||||||| ||||||    
T  15781413 cgtctcaagcgtactcaacctgcacatttacaccattttgcaatgg 15781368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 141 - 362
Target Start/End: Original strand, 3255316 - 3255541
Alignment:
Q  141 atagaatataaagaaaacaactcccgaaaagatcataatcagagcctagactagactccaaagcaaaagaaaatgaggaagcgtcaagctagttctcggt 240  Q
    |||||||| ||| ||| |||||||||||||| || |||||||||||||||||||||||||||   |||| |||||||||||| ||||||||   |||| |    
T  3255316 atagaata-aaataaagcaactcccgaaaaggtcttaatcagagcctagactagactccaaaaacaaaggaaatgaggaagcctcaagctaaacctcgat 3255414  T
Q  241 acacacgtcgtctcaagcgtcctcaacctgcacgtctacaccattttacaatggtgagacg----accaaa-agtcattggagggtaagtttgcattcaa 335  Q
    || ||| | |||||||||||||||||  ||||||||| |||||||||| ||   |||| ||    |||||| |  ||  | ||||||||||| |||||||    
T  3255415 actcacattgtctcaagcgtcctcaatatgcacgtcttcaccattttaaaacaatgaggcggtcaaccaaacaaccaccgaagggtaagtttacattcaa 3255514  T
Q  336 cattaagaaattacgaattcaagtata 362  Q
    ||||||||||||| |||||||||||||    
T  3255515 cattaagaaattatgaattcaagtata 3255541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 284
Target Start/End: Complemental strand, 15889188 - 15889158
Alignment:
Q  254 caagcgtcctcaacctgcacgtctacaccat 284  Q
    |||||||||||||||||||||||||||||||    
T  15889188 caagcgtcctcaacctgcacgtctacaccat 15889158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 177 - 294
Target Start/End: Complemental strand, 368759 - 368641
Alignment:
Q  177 aatcagagcc-tagactagactccaaagcaaaagaaaatgaggaagcgtcaagctagttctcggtacacacgtcgtctcaagcgtcctcaacctgcacgt 275  Q
    |||||||||| ||||||||||||||||   ||| |||||| |||||| |||||||| | |||  ||| ||| ||||||||||||||||    ||||||||    
T  368759 aatcagagccctagactagactccaaaatcaaataaaatggggaagcctcaagctaatcctcattactcacatcgtctcaagcgtccttgggctgcacgt 368660  T
Q  276 ctacaccattttacaatgg 294  Q
    |||||||||||||||||||    
T  368659 ctacaccattttacaatgg 368641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 283
Target Start/End: Complemental strand, 2286833 - 2286736
Alignment:
Q  190 actagactccaaa--gcaa-aagaaaatgaggaagcgtcaagctagttctcggtacacacgtcgtctcaagcgtcctcaa-cctgcacgtctacacca 283  Q
    |||||||||||||  |||| ||||||||||||||||||||||||| | || ||||| |||| ||||||||||||| |||| | |||||||||||||||    
T  2286833 actagactccaaaatgcaataagaaaatgaggaagcgtcaagctaatccttggtactcacgccgtctcaagcgtcttcaatcatgcacgtctacacca 2286736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 298
Target Start/End: Complemental strand, 5699435 - 5699375
Alignment:
Q  238 ggtacacacgtcgtctcaagcgtcctcaacctgcacgtctacaccattttacaatggtgag 298  Q
    ||||| ||||||||| |||||||||| | ||| || |||||||||||||| ||||||||||    
T  5699435 ggtactcacgtcgtcacaagcgtcctgatcctacaagtctacaccatttttcaatggtgag 5699375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 207 - 284
Target Start/End: Complemental strand, 14773 - 14695
Alignment:
Q  207 aagaaaatgaggaagcgtcaagctagttctcggtacacacgtcgtctcaagcgtcctcaa-cctgcacgtctacaccat 284  Q
    ||||||||||||||||||||||||||| ||| |||| |||| ||||||||||||  |||| |||| |||| ||||||||    
T  14773 aagaaaatgaggaagcgtcaagctagtcctctgtactcacgccgtctcaagcgttgtcaatcctgtacgtttacaccat 14695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000001; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 20879726 - 20879803
Alignment:
Q  1 taattcgtattatgatcaaggtgccacatcattaaaactataaacattcaaagtacatttttcatctaagtttctcaac 79  Q
    |||||| ||||||||||||||||| |||||||| |||||  |||||| |||  ||||||||||||| ||||||| ||||    
T  20879726 taattcatattatgatcaaggtgctacatcatt-aaactcaaaacatgcaagatacatttttcatcaaagtttcacaac 20879803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 298
Target Start/End: Original strand, 20880209 - 20880316
Alignment:
Q  190 actagactccaaagcaaaagaaaatgaggaagcgtcaagctagttctcggtacacacgtcgtctcaagcgtcctcaacctgcacgtctacacca-tttta 288  Q
    ||||||||||||||| ||||||||||||||||| | |||||| | |||| ||| ||   | |||||||||| ||| || || |||||||||||| |||||    
T  20880209 actagactccaaagc-aaagaaaatgaggaagccttaagctaatcctcgatactcataccatctcaagcgt-ctccacatgtacgtctacaccattttta 20880306  T
Q  289 caatggtgag 298  Q
    ||||||||||    
T  20880307 caatggtgag 20880316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 283
Target Start/End: Complemental strand, 34645366 - 34645327
Alignment:
Q  244 cacgtcgtctcaagcgtcctcaacctgcacgtctacacca 283  Q
    ||||||| ||||| ||||||||||||||||||||||||||    
T  34645366 cacgtcgactcaaacgtcctcaacctgcacgtctacacca 34645327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 195
Target Start/End: Original strand, 20879857 - 20879961
Alignment:
Q  90 aatctcctaatacattaaactaaaccaacaaggtctccatataaatccaacatagaatataaagaaaacaactcccgaaaagatcataatcagagcctag 189  Q
    |||||| |||||||| |||  ||| ||| | ||||||||||||| |||||||||| ||||||| |||| || | |  |||| ||| ||||||||| ||||    
T  20879857 aatctcataatacatcaaataaaaacaatagggtctccatataattccaacatagcatataaataaaataa-tactcaaaatatcctaatcagagtctag 20879955  T
Q  190 actaga 195  Q
    ||||||    
T  20879956 actaga 20879961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 283
Target Start/End: Original strand, 29318542 - 29318653
Alignment:
Q  176 taatcagagcctagact-agactccaaa-gcaa-aagaaaatgaggaagcgtcaagctagttctcggtacacacgtcgtctcaagcgtcctcaa-cctgc 271  Q
    ||||||||||||| | | |||||||||| |||| |||||||||||||||||||||| || | ||| |||| || | ||||||||||||| |||| | |||    
T  29318542 taatcagagcctacaattagactccaaaagcaacaagaaaatgaggaagcgtcaagttaatcctcagtactcatgccgtctcaagcgtcatcaatcttgc 29318641  T
Q  272 acgtctacacca 283  Q
    ||||||| ||||    
T  29318642 acgtctatacca 29318653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 26837377 - 26837349
Alignment:
Q  255 aagcgtcctcaacctgcacgtctacacca 283  Q
    |||||||||||||||||||||||||||||    
T  26837377 aagcgtcctcaacctgcacgtctacacca 26837349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 283
Target Start/End: Complemental strand, 21933390 - 21933360
Alignment:
Q  253 tcaagcgtcctcaacctgcacgtctacacca 283  Q
    |||||||||||||||||||||||||||||||    
T  21933390 tcaagcgtcctcaacctgcacgtctacacca 21933360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University