View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1505_low_37 (Length: 250)
Name: NF1505_low_37
Description: NF1505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1505_low_37 |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 18717676 - 18717914
Alignment:
| Q |
1 |
ttgtaccacctcctttaaatacttttgtacgacattatatcttcatagtaattcataggatgtttggaattctgcagattcattcaacgtgttaattaat |
100 |
Q |
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| T |
18717676 |
ttgtaccacctcctttaaatacttttctatgacattatatcttcatagtaattcataggatgtttggaattctgcagattcattcaacgtgttaattaat |
18717775 |
T |
|
| Q |
101 |
aacggagcagctgctggtcaagtaatatttcatgtaagattctctgtattttctctactgttattattaattttgcggaatcatacatttaattcacaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18717776 |
aacggagcagctgctggtcaagtaatatttcatgtaagattctctgtattttctctactgttattattaattttgcggaatcatacatttaattcacaaa |
18717875 |
T |
|
| Q |
201 |
ttgtgaaatttaatttattttcctataaaacatgttcat |
239 |
Q |
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||||||||||||||||||||||||| ||||||||||||| |
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| T |
18717876 |
ttgtgaaatttaatttattttcctaaaaaacatgttcat |
18717914 |
T |
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