View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1505_low_41 (Length: 246)
Name: NF1505_low_41
Description: NF1505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1505_low_41 |
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Alignment Details
Target: chr3 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 39526819 - 39526583
Alignment:
| Q |
1 |
ttggtttatgttctgtttgaatattataaaggtaggacagagtctctccttttattgcctaaaaactgaattggttaaataataatttcgttaaaagtgt |
100 |
Q |
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| T |
39526819 |
ttggtttatgttctgtttgaatattataaatgtaggacagtgtctctccttttattgcctaaaaactgaattggttaaataataatttcgttaaaagtgt |
39526720 |
T |
|
| Q |
101 |
ttgattatgattgttttgctaataaatagattaagtaatactgaaaattcgtactggtttaccaaaattgccataccttgaagttgttatttcaaaacca |
200 |
Q |
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| T |
39526719 |
ttgattatgattgttttgctaataaatagattaagtaatactgaaaattcgtactggtttaccaaaattgccataccttgaagttgttatttcaaaacca |
39526620 |
T |
|
| Q |
201 |
tatttagaaggtaaatgtataggttcatgatgatatt |
237 |
Q |
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|||||||||||||||| |||||||||||||||||||| |
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| T |
39526619 |
tatttagaaggtaaatttataggttcatgatgatatt |
39526583 |
T |
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