View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1505_low_59 (Length: 206)

Name: NF1505_low_59
Description: NF1505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1505_low_59
NF1505_low_59
[»] scaffold0390 (2 HSPs)
scaffold0390 (21-190)||(12787-12956)
scaffold0390 (61-190)||(5811-5940)
[»] chr3 (27 HSPs)
chr3 (18-190)||(15599744-15599915)
chr3 (18-190)||(15606289-15606460)
chr3 (19-190)||(10578193-10578363)
chr3 (18-190)||(8491560-8491731)
chr3 (20-190)||(10571427-10571597)
chr3 (18-190)||(13212476-13212647)
chr3 (18-190)||(16481318-16481489)
chr3 (17-190)||(13258721-13258893)
chr3 (18-190)||(6111276-6111446)
chr3 (18-177)||(13691871-13692029)
chr3 (18-190)||(13517985-13518156)
chr3 (17-190)||(17780024-17780194)
chr3 (17-190)||(19081325-19081495)
chr3 (17-178)||(18534825-18534985)
chr3 (17-190)||(18538171-18538343)
chr3 (18-190)||(15341077-15341250)
chr3 (27-190)||(1646363-1646527)
chr3 (18-190)||(15356444-15356617)
chr3 (17-177)||(32055273-32055433)
chr3 (27-176)||(23014210-23014360)
chr3 (17-190)||(16201395-16201567)
chr3 (17-117)||(12564395-12564494)
chr3 (85-132)||(17196702-17196749)
chr3 (123-182)||(25801377-25801436)
chr3 (23-129)||(6288184-6288288)
chr3 (10-79)||(25801447-25801516)
chr3 (22-119)||(47699511-47699607)
[»] chr6 (15 HSPs)
chr6 (18-190)||(17690300-17690471)
chr6 (18-190)||(27380087-27380258)
chr6 (18-190)||(27470470-27470641)
chr6 (18-190)||(27278543-27278714)
chr6 (18-190)||(27297835-27298006)
chr6 (18-190)||(27303434-27303605)
chr6 (18-190)||(29310066-29310237)
chr6 (18-190)||(29317025-29317196)
chr6 (18-190)||(11652874-11653045)
chr6 (132-190)||(17683430-17683488)
chr6 (124-190)||(18336765-18336831)
chr6 (18-122)||(16393339-16393442)
chr6 (27-173)||(28755124-28755271)
chr6 (86-161)||(2670013-2670091)
chr6 (85-119)||(19346305-19346339)
[»] chr4 (26 HSPs)
chr4 (18-190)||(10620168-10620339)
chr4 (18-190)||(8859368-8859540)
chr4 (18-190)||(18263388-18263560)
chr4 (18-190)||(28392002-28392173)
chr4 (18-190)||(55613884-55614055)
chr4 (21-184)||(20579275-20579437)
chr4 (18-190)||(5715149-5715319)
chr4 (18-190)||(26964747-26964916)
chr4 (18-190)||(26971641-26971810)
chr4 (20-190)||(18270249-18270419)
chr4 (18-190)||(10825189-10825358)
chr4 (18-190)||(869797-869968)
chr4 (27-190)||(19925604-19925766)
chr4 (27-190)||(19919375-19919537)
chr4 (18-190)||(5708513-5708685)
chr4 (18-179)||(10676422-10676584)
chr4 (18-179)||(10890062-10890224)
chr4 (45-182)||(5667054-5667192)
chr4 (18-179)||(47387788-47387950)
chr4 (18-190)||(4425468-4425646)
chr4 (18-178)||(35224740-35224903)
chr4 (91-190)||(10627327-10627421)
chr4 (21-116)||(49066009-49066103)
chr4 (123-157)||(27031782-27031816)
chr4 (18-73)||(10627274-10627327)
chr4 (45-98)||(55992914-55992967)
[»] scaffold0203 (1 HSPs)
scaffold0203 (18-190)||(29046-29215)
[»] chr1 (9 HSPs)
chr1 (17-190)||(27130256-27130428)
chr1 (18-190)||(18253206-18253377)
chr1 (14-190)||(18531369-18531544)
chr1 (18-190)||(27309412-27309584)
chr1 (27-184)||(16357900-16358058)
chr1 (17-190)||(21169282-21169440)
chr1 (57-182)||(22640744-22640874)
chr1 (18-182)||(9075751-9075900)
chr1 (82-117)||(25662281-25662316)
[»] chr7 (15 HSPs)
chr7 (22-190)||(2652852-2653019)
chr7 (18-190)||(11534921-11535093)
chr7 (18-190)||(11541840-11542011)
chr7 (18-190)||(29328964-29329135)
chr7 (18-190)||(12752035-12752206)
chr7 (18-177)||(15153656-15153815)
chr7 (20-190)||(12739718-12739886)
chr7 (21-182)||(9979012-9979174)
chr7 (17-182)||(18562217-18562386)
chr7 (20-177)||(18256679-18256836)
chr7 (18-143)||(11557075-11557199)
chr7 (85-182)||(30926279-30926378)
chr7 (82-117)||(7748213-7748248)
chr7 (94-138)||(22947653-22947697)
chr7 (82-116)||(30918034-30918068)
[»] scaffold0657 (1 HSPs)
scaffold0657 (18-190)||(3893-4064)
[»] scaffold0433 (1 HSPs)
scaffold0433 (18-190)||(8284-8455)
[»] scaffold0234 (2 HSPs)
scaffold0234 (18-190)||(10071-10243)
scaffold0234 (18-190)||(1178-1350)
[»] chr8 (11 HSPs)
chr8 (20-190)||(21941843-21942012)
chr8 (18-190)||(6095322-6095492)
chr8 (18-190)||(15327399-15327569)
chr8 (18-190)||(15507768-15507938)
chr8 (14-190)||(22172661-22172840)
chr8 (24-170)||(28549230-28549376)
chr8 (52-176)||(24644138-24644263)
chr8 (24-184)||(24795853-24796012)
chr8 (18-136)||(29230589-29230706)
chr8 (18-115)||(27660698-27660795)
chr8 (93-177)||(17089259-17089347)
[»] scaffold1199 (1 HSPs)
scaffold1199 (18-190)||(301-472)
[»] scaffold0220 (1 HSPs)
scaffold0220 (18-190)||(19489-19660)
[»] scaffold0026 (1 HSPs)
scaffold0026 (21-191)||(26388-26557)
[»] scaffold0213 (1 HSPs)
scaffold0213 (18-190)||(4416-4587)
[»] scaffold0061 (1 HSPs)
scaffold0061 (22-190)||(5060-5227)
[»] chr5 (10 HSPs)
chr5 (50-190)||(24694351-24694491)
chr5 (50-190)||(24701120-24701260)
chr5 (27-177)||(18565324-18565475)
chr5 (50-160)||(19713397-19713508)
chr5 (18-161)||(28718819-28718960)
chr5 (18-182)||(39539713-39539879)
chr5 (25-119)||(22546232-22546323)
chr5 (22-117)||(938385-938477)
chr5 (82-119)||(17297916-17297953)
chr5 (90-119)||(17314000-17314029)
[»] chr2 (5 HSPs)
chr2 (31-190)||(22790704-22790864)
chr2 (18-182)||(18621020-18621184)
chr2 (18-182)||(41664949-41665115)
chr2 (20-178)||(27353546-27353696)
chr2 (86-161)||(12298996-12299072)
[»] scaffold0705 (1 HSPs)
scaffold0705 (18-190)||(7497-7670)
[»] scaffold0032 (1 HSPs)
scaffold0032 (18-182)||(107107-107270)
[»] scaffold0063 (1 HSPs)
scaffold0063 (18-182)||(6712-6877)
[»] scaffold1303 (1 HSPs)
scaffold1303 (70-190)||(892-1012)
[»] scaffold0039 (1 HSPs)
scaffold0039 (18-177)||(87900-88059)
[»] scaffold0502 (1 HSPs)
scaffold0502 (45-190)||(222-367)
[»] scaffold0008 (1 HSPs)
scaffold0008 (18-176)||(229242-229404)


Alignment Details
Target: scaffold0390 (Bit Score: 158; Significance: 3e-84; HSPs: 2)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 21 - 190
Target Start/End: Original strand, 12787 - 12956
Alignment:
Q  21 agggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaacag 120  Q
    ||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12787 agggattttgagagaggtttttcaaaaattttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaacag 12886  T
Q  121 aaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12887 aaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 12956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 61 - 190
Target Start/End: Original strand, 5811 - 5940
Alignment:
Q  61 ttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaacagaaacttaaacactttaagattcatgtgtttacctcttgaa 160  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5811 ttgcggaagaaatcccattaaaacggatcttgattaaattattaatcacaaatcaaacagaaacttaaacactttaagattcatgtgtttacctcctgaa 5910  T
Q  161 gagcagaacctttgtagcagaaatctttct 190  Q
    ||||||||||||||||||||||||||||||    
T  5911 gagcagaacctttgtagcagaaatctttct 5940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 1e-83; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 15599744 - 15599915
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15599744 tgaagggattttaagaggggtttttcaaaat-tttaatcctctttgcggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaa 15599842  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15599843 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 15599915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 15606289 - 15606460
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15606289 tgaagggattttaagaggggtttttcaaaat-tttaatcctctttgcggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaa 15606387  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15606388 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 15606460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 19 - 190
Target Start/End: Original strand, 10578193 - 10578363
Alignment:
Q  19 gaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaac 118  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10578193 gaagggattttaagaggggtttttcaaaat-tttaatcctctttgcggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaac 10578291  T
Q  119 agaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10578292 agaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatttttct 10578363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 8491731 - 8491560
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8491731 tgaagggattttaagaggggtttttcaaaaa-tttaatcctctttgcggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaa 8491633  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  8491632 tagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagaagaaatatttct 8491560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 20 - 190
Target Start/End: Original strand, 10571427 - 10571597
Alignment:
Q  20 aagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaaca 119  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10571427 aagggattttaagaggggtttttcaaaat-tttaatcctctttgcggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaaca 10571525  T
Q  120 gaaacttaaacac-tttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10571526 gaaacttaaacacttttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 10571597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 13212647 - 13212476
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    |||||||||||||||||| |||||||||||  ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13212647 tgaagggattttaagaggagtttttcaaaat-tttaatcctctttacggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaa 13212549  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  13212548 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagaagaaatatttct 13212476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 16481318 - 16481489
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||||||||||||||||||||||  || |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16481318 tgaagggattttaagaggggtttttcaaaat-ttaaatcctctttacggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaa 16481416  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
     | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16481417 taaaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 16481489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 17 - 190
Target Start/End: Complemental strand, 13258893 - 13258721
Alignment:
Q  17 atgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaa 116  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13258893 atgaagggattttaagaggggtttttcaaaat-tttaatcctctttacggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaa 13258795  T
Q  117 acagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||    
T  13258794 acagaaacttaaacattttaagattcatgtgtttacctcttgaagagtagaacctttgtagaagaaatatttct 13258721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 6111446 - 6111276
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  6111446 tgaagggattttaagaggg-tttttcaaaat-tttaatcctctttgcggaagaaatcccattgaaacggatgttgattaaatcattaatcacaaatcaaa 6111349  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  6111348 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagaagaaatatttct 6111276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 13692029 - 13691871
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  13692029 tgaagggatttgaagaggggtttttcaaaat-tttaatcctctttgcggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcata 13691931  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtag 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13691930 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtag 13691871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 13518156 - 13517985
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||||||||||||||||||||||  |||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||     
T  13518156 tgaagggattttaagaggggtttttcaaaat-tttattcctctttgcagaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaat 13518058  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||    
T  13518057 cagaaacttaaacactttaagattcatgtgtttacctcttgaaaagcagaacctttgtagaagaaatatttct 13517985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 17 - 190
Target Start/End: Original strand, 17780024 - 17780194
Alignment:
Q  17 atgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaa 116  Q
    |||||||||||||||||||||||||   |||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  17780024 atgaagggattttaagaggggttttc--aaaattttaatcctctttgcggaagaaatcccatgaaa-cggatcttgattaaatcattaatcacaaatcaa 17780120  T
Q  117 acagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  17780121 acagaaacttaaacacttaaagattcatgtgtttacctcttgaagagcagaacctttgtagaagaaatatttct 17780194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 17 - 190
Target Start/End: Original strand, 19081325 - 19081495
Alignment:
Q  17 atgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaa 116  Q
    |||||||||||||||||||||||||   |||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  19081325 atgaagggattttaagaggggttttc--aaaattttaatcctctttgcggaagaaatcccatgaaa-cggatcttgattaaatcattaatcacaaatcaa 19081421  T
Q  117 acagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  19081422 acagaaacttaaacacttaaagattcatgtgtttacctcttgaagagcagaacctttgtagaagaaatatttct 19081495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 17 - 178
Target Start/End: Complemental strand, 18534985 - 18534825
Alignment:
Q  17 atgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaa 116  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||| | ||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  18534985 atgaagggattttaagagggatttttcaaaat-tttaatcctctttacagaagaaatctcattgaaacggatcttgattaaatcattaatcacaaatcaa 18534887  T
Q  117 acagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagc 178  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18534886 atagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagc 18534825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 17 - 190
Target Start/End: Complemental strand, 18538343 - 18538171
Alignment:
Q  17 atgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaa 116  Q
    |||||||||||||||||| | ||||||||||  ||||||||||||| | ||||||||| |||| ||||||||||||||||||||||||||||||||| ||    
T  18538343 atgaagggattttaagagagatttttcaaaat-tttaatcctctttacagaagaaatctcattgaaacggatcttgattaaatcattaatcacaaattaa 18538245  T
Q  117 acagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18538244 atagaaacttaaacactttaagattcatgtgtttatctcttgaagagcagaacctttgtagcagaaatctttct 18538171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 15341077 - 15341250
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatt-taatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaa 116  Q
    ||||||||||||||||| |||||||| |||  || |||||||||  |||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  15341077 tgaagggattttaagagaggtttttccaaattttataatcctctaagcggaacaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaa 15341176  T
Q  117 acagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||    
T  15341177 tcagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagaaaaaatatttct 15341250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 27 - 190
Target Start/End: Original strand, 1646363 - 1646527
Alignment:
Q  27 tttaagaggggtttttcaaaaaatt-taatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaacagaaact 125  Q
    |||||||| ||||||||||||  || |||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1646363 tttaagagaggtttttcaaaattttataatcctcttagcggaacaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaacagaaact 1646462  T
Q  126 taaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||| |||||    
T  1646463 taaacactttaagattaatgtgtttacctcttgaagagcagaacctttgtagaataaatatttct 1646527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 15356444 - 15356617
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatt-taatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaa 116  Q
    ||||||||||||||||| |||||||| |||  || |||||||||  |||||| ||||| |||| ||||||||||||||||||||||||||||||||||||    
T  15356444 tgaagggattttaagagaggtttttccaaattttataatcctctaagcggaacaaatctcattgaaacggatcttgattaaatcattaatcacaaatcaa 15356543  T
Q  117 acagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||    
T  15356544 tcagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagaaaaaatatttct 15356617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 17 - 177
Target Start/End: Original strand, 32055273 - 32055433
Alignment:
Q  17 atgaagggattttaagaggggtttttcaaaaaatt-taatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatca 115  Q
    |||||||||||| ||||| ||||||||||||  || |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  32055273 atgaagggattt-aagagaggtttttcaaaattttataatcctctttgcggaagaaattccattgaaacggatcttgattaaatcattaatcacaaatca 32055371  T
Q  116 aacagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtag 177  Q
    || ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32055372 aatagaaattgaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtag 32055433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 23014210 - 23014360
Alignment:
Q  27 tttaagaggggtttttcaaaaaatt-taatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaacagaaact 125  Q
    |||||||| ||||||||||||  || |||||||||| |||||| || ||||||| ||||  |||||||||||||||||||||||||||||||||||||||    
T  23014210 tttaagagaggtttttcaaaattttataatcctcttagcggaacaattcccattgaaacatatcttgattaaatcattaatcacaaatcaaacagaaact 23014309  T
Q  126 taaacactttaagattcatgtgtttacctcttgaagagcagaacctttgta 176  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  23014310 taaacactttaagattcatgtgtttacctcttgaagaacagaacctttgta 23014360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 17 - 190
Target Start/End: Complemental strand, 16201567 - 16201395
Alignment:
Q  17 atgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaa 116  Q
    ||||||||| |||||||  ||||||||||||  |||||||||||| ||| |||||||||||| |||||| |||||||||||||||||| |||||||||||    
T  16201567 atgaagggaatttaagaaaggtttttcaaaat-tttaatcctcttagcgaaagaaatcccatgaaaacgaatcttgattaaatcattactcacaaatcaa 16201469  T
Q  117 acagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    ||| ||||||||||| ||||||| | ||||||||||||| | ||||| ||||||||||||||| |||| |||||    
T  16201468 acaaaaacttaaacattttaagagtaatgtgtttacctcctaaagagtagaacctttgtagcataaatgtttct 16201395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 12564494 - 12564395
Alignment:
Q  17 atgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaa 116  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12564494 atgaagggattttaagaggggtttttcaaaat-tttaatcctctttacggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaa 12564396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 85 - 132
Target Start/End: Original strand, 17196702 - 17196749
Alignment:
Q  85 ggatcttgattaaatcattaatcacaaatcaaacagaaacttaaacac 132  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17196702 ggatcttgattaaatcattaatcacaaatcaaacaaaaacttaaacac 17196749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 25801436 - 25801377
Alignment:
Q  123 acttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaa 182  Q
    ||||||||| || |||||||||||||||||||||||||| ||| ||||||||||||||||    
T  25801436 acttaaacatttaaagattcatgtgtttacctcttgaagcgcataacctttgtagcagaa 25801377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 129
Target Start/End: Original strand, 6288184 - 6288288
Alignment:
Q  23 ggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaacagaa 122  Q
    ||||||||| |||||||||||||||  |||||||||||| |  ||| ||||| |  | || |||||||||||||||||||||||||||||| |||||  |    
T  6288184 ggattttaaaaggggtttttcaaaat-tttaatcctcttagtagaataaatctcgatgaa-cggatcttgattaaatcattaatcacaaattaaacaaca 6288281  T
Q  123 acttaaa 129  Q
    |||||||    
T  6288282 acttaaa 6288288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 25801516 - 25801447
Alignment:
Q  10 catcatcatgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccatt 79  Q
    ||||| ||||||||||||| |||||||||||||  |||| |||||||||||| | |||| ||||||||||    
T  25801516 catcaacatgaagggatttaaagaggggttttttcaaaattttaatcctcttagtggaacaaatcccatt 25801447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 47699511 - 47699607
Alignment:
Q  22 gggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaaca 119  Q
    ||||||| ||||||||| |||   ||| |||||||||||| | |||| |||| ||| | | |||| |||||||||| |||||||||| ||||||||||    
T  47699511 gggatttcaagaggggtattttccaaattttaatcctcttagaggaataaattccaat-agacgggtcttgattaagtcattaatcataaatcaaaca 47699607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 149; Significance: 7e-79; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 17690300 - 17690471
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17690300 tgaagggattttaagaggggtttttcaaaat-tttaatcctctttgcggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaa 17690398  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  17690399 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagaagaaatatttct 17690471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 27380087 - 27380258
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27380087 tgaagggattttaagaggggtttttcaaaa-atttaatcctctttgcggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaa 27380185  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  27380186 tagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagaagaaatatttct 27380258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 27470470 - 27470641
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27470470 tgaagggattttaagaggggtttttcaaaa-atttaatcctctttgcggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaa 27470568  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  27470569 tagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagaagaaatatttct 27470641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 27278714 - 27278543
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27278714 tgaagggattttaagaggggtttttcaaaatatt-aatcctctttgcggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaa 27278616  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||    
T  27278615 cagaaacttaaacactttaagattcacgtgtttacctcttgaagagcagaacctttgtagaagaaatatttct 27278543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 27298006 - 27297835
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27298006 tgaagggattttaagaggggtttttcaaaatatt-aatcctctttgcggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaa 27297908  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||    
T  27297907 cagaaacttaaacactttaagattcacgtgtttacctcttgaagagcagaacctttgtagaagaaatatttct 27297835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 27303605 - 27303434
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27303605 tgaagggattttaagaggggtttttcaaaatatt-aatcctctttgcggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaa 27303507  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||    
T  27303506 cagaaacttaaacactttaagattcacgtgtttacctcttgaagagcagaacctttgtagaagaaatatttct 27303434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 29310237 - 29310066
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  29310237 tgaagggattttaagaggggtttttcaaaat-tttaatcctctttgcggaagaaatcccaatgaaacggatcttgattaaatcattaatcacaaatcaaa 29310139  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  29310138 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagaagaaatatttct 29310066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 29317196 - 29317025
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  29317196 tgaagggattttaagaggggtttttcaaaat-tttaatcctctttgcggaagaaatcccaatgaaacggatcttgattaaatcattaatcacaaatcaaa 29317098  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  29317097 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagaagaaatatttct 29317025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 11653045 - 11652874
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  11653045 tgaagggattttaagagggttttttcaaaat-tttaatcctctttgcggaagaaatcccattgaaacgaatcttgattaaatcattaatcacaaatcaaa 11652947  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  11652946 tagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagaagaaatatttct 11652874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 132 - 190
Target Start/End: Original strand, 17683430 - 17683488
Alignment:
Q  132 ctttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17683430 ctttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatatttct 17683488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 124 - 190
Target Start/End: Complemental strand, 18336831 - 18336765
Alignment:
Q  124 cttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  18336831 cttaaacactttaaaattcatgtgtttacctcttgaagagcagaacctttgtagcataaatgtttct 18336765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 122
Target Start/End: Original strand, 16393339 - 16393442
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccatt-aaaacggatcttgattaaatcattaatcacaaatcaa 116  Q
    |||||||||||| ||||| |||||||||||| ||  |||||||| |||| | ||||| |||| |||||||||||| ||||||||||||||||||||||||    
T  16393339 tgaagggattttgagaggagtttttcaaaaattt--atcctcttagcggtacaaatctcattgaaaacggatctttattaaatcattaatcacaaatcaa 16393436  T
Q  117 acagaa 122  Q
     |||||    
T  16393437 ccagaa 16393442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 173
Target Start/End: Original strand, 28755124 - 28755271
Alignment:
Q  27 tttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaat-cacaaatcaaacagaaact 125  Q
    |||||||||| ||||||||||  ||||||| |||| |||||| |||| ||| | |||| |||||||||||||||| ||||  | |||| ||| | | | |    
T  28755124 tttaagagggatttttcaaaat-tttaatcatcttggcggaacaaattccactgaaacagatcttgattaaatcactaataaaaaaattaaatacataat 28755222  T
Q  126 taaacactttaa-gattcatgtgtttacctcttgaagagcagaaccttt 173  Q
    |||||| ||||| |||||| ||||||||||||||||  |||||||||||    
T  28755223 taaacattttaaggattcacgtgtttacctcttgaatcgcagaaccttt 28755271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 2670091 - 2670013
Alignment:
Q  86 gatcttgattaaatcattaatcacaaatcaa--acagaaacttaaacactttaa-gattcatgtgtttacctcttgaag 161  Q
    ||||||||||||||| ||||||| |||||||  ||| | ||||||||||||||| |||| | |||||||| ||||||||    
T  2670091 gatcttgattaaatcgttaatcaaaaatcaaacacatatacttaaacactttaaggatttacgtgtttacatcttgaag 2670013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 119
Target Start/End: Original strand, 19346305 - 19346339
Alignment:
Q  85 ggatcttgattaaatcattaatcacaaatcaaaca 119  Q
    |||||||||||||| ||||||||||||||||||||    
T  19346305 ggatcttgattaaaccattaatcacaaatcaaaca 19346339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 149; Significance: 7e-79; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 10620168 - 10620339
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  10620168 tgaagggattttaagaggggtttttcaaaat-tttaatcctctttgcggaagaaatcccattgaaacagatcttgattaaatcattaatcacaaatcaaa 10620266  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10620267 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctctgtagcagaaatctttct 10620339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 8859540 - 8859368
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    |||||||||||||||||||| ||||  |||| ||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8859540 tgaagggattttaagagggggtttttcaaaattttaatcctctttccgaaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaa 8859441  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8859440 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 8859368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 18263560 - 18263388
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    |||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18263560 tgaagggattttaagaggggttttttcaaaattttaatcctctttgcggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaa 18263461  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
     ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||    
T  18263460 tagaaacttaaacactttaagattcatgtgtttacctcttgacgagcagaacctttgtagaagaaatatttct 18263388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 28392002 - 28392173
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  28392002 tgaagggattttaagaggggtttttcaaaat-tttaatcctctttgcggaagaaatctcattgaaacggatcttgattaaatcattaatcacaaatcaaa 28392100  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||    
T  28392101 cagaaacttaaacactttaagattcatatgtttacctcttgaagagcagaacctttgtagaagaaatatttct 28392173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 55614055 - 55613884
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||||||||||||||||||||||  || |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  55614055 tgaagggattttaagaggggtttttcaaaat-ttaaatcctctttacggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaa 55613957  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
     | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55613956 taaaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 55613884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 20579275 - 20579437
Alignment:
Q  21 agggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaacag 120  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  20579275 agggattttaagaggggtttttcaaaa-atttaatcctctttgcggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaatag 20579373  T
Q  121 aaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaat 184  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  20579374 aaacttaaacactttaagattcatgtgtttacctcttgaagagtagaacctttgtagaagaaat 20579437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 5715319 - 5715149
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||||||||||||||||   |||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  5715319 tgaagggattttaagaggggttttc--aaaattttaatcctctttgcggaagaaatctcattgaaacggatcttgattaaatcattaatcacaaatcaaa 5715222  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  5715221 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagaagaaatatttct 5715149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 26964916 - 26964747
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||||||||||||||||||||||  |||||||||||  ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  26964916 tgaagggattttaagaggggtttttcaaaat-tttaatcctct--gcggaagaaatcccattgaaaccgatcttgattaaatcattaatcacaaatcaaa 26964820  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26964819 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcataaatctttct 26964747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 26971810 - 26971641
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||||||||||||||||||||||  |||||||||||  ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  26971810 tgaagggattttaagaggggtttttcaaaat-tttaatcctct--gcggaagaaatcccattgaaaccgatcttgattaaatcattaatcacaaatcaaa 26971714  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26971713 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcataaatctttct 26971641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 18270419 - 18270249
Alignment:
Q  20 aagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaaca 119  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  18270419 aagggattttaagaggggttttttcaaaattttaatcctctttgcggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaata 18270320  T
Q  120 gaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||| |||||    
T  18270319 gaaacttaaacactttaagattcatgtgtttacctcttgacgagcagaacctttatagaagaaatatttct 18270249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 10825189 - 10825358
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||    
T  10825189 tgaagggattttaagaggggtttttcaaaat-tttaatcctctttgcggaataaatcccattgaaacagatcttgattaaatcattaatcacaaatcaaa 10825287  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10825288 cagaaacttaaacacttta--attcatgtgtttacctcttgaagagcagaacctctgtagcagaaatctttct 10825358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 869968 - 869797
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  869968 tgaagggattttaagagggatttttcaaaaa-tttaattctctttgcggaagaaatcctattgaaacggatcttgattaaatcattaatcacaaatcaaa 869870  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||    
T  869869 tagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacatttgtagaagaaatatttct 869797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 27 - 190
Target Start/End: Original strand, 19925604 - 19925766
Alignment:
Q  27 tttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaacagaaactt 126  Q
    ||||| |||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19925604 tttaaaagggatttttcaaaa-atttaatcctctttgcggaagaaatcccaataaaacggatcttgattaaatcattaatcacaaatcaaacagaaactt 19925702  T
Q  127 aaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||    
T  19925703 aaacactttaagattcatgtgtttacctcttgaagagcacaacctttgtagaagaaatatttct 19925766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 27 - 190
Target Start/End: Original strand, 19919375 - 19919537
Alignment:
Q  27 tttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaacagaaactt 126  Q
    ||||| |||| |||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  19919375 tttaaaagggatttttcaaaa-atttaatcctctttgcggaagaaatcccaatgaaacggatcttgattaaatcattaatcacaaatcaaacagaaactt 19919473  T
Q  127 aaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||    
T  19919474 aaacactttaagattcatgtgtttacctcttgaagagcacaacctttgtagaagaaatatttct 19919537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 5708685 - 5708513
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctct--ttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatca 115  Q
    ||||||||||||||||||||||||   |||| |||||||||||  ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5708685 tgaagggattttaagaggggttttc--aaaattttaatcctctctttgtggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatca 5708588  T
Q  116 aacagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||| |||||    
T  5708587 aacagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaatctttgtataagaaatatttct 5708513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 18 - 179
Target Start/End: Original strand, 10676422 - 10676584
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccatt-aaaacgga-tcttgattaaatcattaatcacaaatca 115  Q
    ||||||||||| ||||||| |||||||||   |||||||||||| |||||| |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  10676422 tgaagggatttaaagagggttttttcaaatt-tttaatcctcttagcggaacaaatcccattgaaaacggaatcttgattaaatcattaatcacaaatca 10676520  T
Q  116 aacagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagca 179  Q
    |||| ||||||||||||||    ||||||||||||||||||||||||| |||||||||||||||    
T  10676521 aacacaaacttaaacacttacgaattcatgtgtttacctcttgaagagaagaacctttgtagca 10676584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 18 - 179
Target Start/End: Original strand, 10890062 - 10890224
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccatt-aaaacgga-tcttgattaaatcattaatcacaaatca 115  Q
    ||||||||||| ||||||| |||||||||   |||||||||||| |||||| |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  10890062 tgaagggatttaaagagggttttttcaaatt-tttaatcctcttagcggaacaaatcccattgaaaacggaatcttgattaaatcattaatcacaaatca 10890160  T
Q  116 aacagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagca 179  Q
    |||| ||||||||||||||    ||||||||||||||||||||||||| |||||||||||||||    
T  10890161 aacacaaacttaaacacttacgaattcatgtgtttacctcttgaagagaagaacctttgtagca 10890224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 45 - 182
Target Start/End: Original strand, 5667054 - 5667192
Alignment:
Q  45 aaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaacagaaacttaaacactttaa-gattca 143  Q
    |||| |||||| |||| |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||| ||||||    
T  5667054 aaaattttaatgctctctgcggaagaaatcttattgaaacggatcttgattaaatcattaatcacaaatcaaacacatacttaaacaatttaaggattca 5667153  T
Q  144 tgtgtttacctcttgaagagcagaacctttgtagcagaa 182  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  5667154 tgtgtttacctcttgaagagcagaacctttgtagtagaa 5667192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 179
Target Start/End: Original strand, 47387788 - 47387950
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||| ||    
T  47387788 tgaagggatttcaagaggggtttttcaaaat-tttaatcctctttgcggaagaaatctcattgaaacggatcttgattaaatcattaatcacacatctaa 47387886  T
Q  118 cagaaacttaaacactttaag-attcatgtgtttacc-tcttgaagagcagaacctttgtagca 179  Q
    || | | |||| || |||||| ||||||||||||||| |  |||||||||||||||||||||||    
T  47387887 cacatatttaagcaatttaagaattcatgtgtttaccttgatgaagagcagaacctttgtagca 47387950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 4425468 - 4425646
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||| ||||| |||||||||||   | |||||||||  |||||| ||||| |||| |||| ||||||||||||||||||||||||||||||||    
T  4425468 tgaagggattt-aagagaggtttttcaaattttataatcctctaagcggaacaaatctcattgaaacagatcttgattaaatcattaatcacaaatcaaa 4425566  T
Q  118 cagaaacttaaacactttaagat-------tcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||       |||||||||||||||||||||||| |||| ||||||| |||||| |||||    
T  4425567 cagaaacttaaacactttaagattatgtcatcatgtgtttacctcttgaagagctgaacttttgtagaagaaatatttct 4425646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 18 - 178
Target Start/End: Complemental strand, 35224903 - 35224740
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaa-----cggatcttgattaaatcattaatcacaaa 112  Q
    ||||||||||| |||||||| |||||||||  |||||||||||   ||||| ||||||||||||||     ||||||||||||||||||| |||||||||    
T  35224903 tgaagggatttcaagagggggttttcaaaat-tttaatcctctcaacggaataaatcccattaaaatgaaacggatcttgattaaatcatcaatcacaaa 35224805  T
Q  113 tcaaacagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagc 178  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||  ||||||||    
T  35224804 tcaaacacaaacttaaacactttaa-attcatgtgtttacctcttgaagcgcagaaattttgtagc 35224740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 91 - 190
Target Start/End: Original strand, 10627327 - 10627421
Alignment:
Q  91 tgattaaatcattaatcacaaatcaaacagaaa-cttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttc 189  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||      |||||||||||||||||||||||||||||| |||||||||||||||||    
T  10627327 tgattaaatcattaatcacaaatcaaacagaaaacttaaacacttt------catgtgtttacctcttgaagagcagaacctctgtagcagaaatctttc 10627420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 49066103 - 49066009
Alignment:
Q  21 agggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaa 116  Q
    |||||||| || ||||||| |||||||| |||||| |||||   |||||||||| | | ||| || ||||||||||||||||||||||||||||||    
T  49066103 agggatttcaacaggggttcttcaaaaattttaatactcttaatggaagaaatctcgtcaaa-cgaatcttgattaaatcattaatcacaaatcaa 49066009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 157
Target Start/End: Complemental strand, 27031816 - 27031782
Alignment:
Q  123 acttaaacactttaagattcatgtgtttacctctt 157  Q
    |||||||||||||||||||||||||||||||||||    
T  27031816 acttaaacactttaagattcatgtgtttacctctt 27031782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 10627274 - 10627327
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaat 73  Q
    |||||||||||||||||||||||||| |||| ||||||||| |||||| |||||||    
T  10627274 tgaagggattttaagaggggtttttc-aaaattttaatcct-tttgcgtaagaaat 10627327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 55992967 - 55992914
Alignment:
Q  45 aaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaa 98  Q
    |||| |||||||||||| ||  || ||||| |||||||||||||||||||||||    
T  55992967 aaaattttaatcctcttagcaaaacaaatctcattaaaacggatcttgattaaa 55992914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 146; Significance: 4e-77; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 29046 - 29215
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29046 tgaagggattttaagaggggtttttcaaaat-tttaatcctctttgcggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaa 29144  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  29145 cagaaacttaaacactttaagattc--gtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 29215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 146; Significance: 4e-77; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 17 - 190
Target Start/End: Original strand, 27130256 - 27130428
Alignment:
Q  17 atgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaa 116  Q
    ||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27130256 atgaaaggattttaagaggggtttttcaaaat-tttaatcctctttgcggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaa 27130354  T
Q  117 acagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  27130355 acagaaacttaaacactttaagattcatgtgattacctcttgaagagcagaacctttgtagcataaatctttct 27130428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 18253377 - 18253206
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  18253377 tgaagggattttaagaggggtttttcaaaat-tttaatcctctttgcagaagaaatcccattgaaacggatcttgattaaattattaatcacaaatcaaa 18253279  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  18253278 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagaagaaatatttct 18253206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 14 - 190
Target Start/End: Original strand, 18531369 - 18531544
Alignment:
Q  14 atcatgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaat 113  Q
    |||||| |||||||||||||||| ||||||||||  |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  18531369 atcatgtagggattttaagagggatttttcaaaat-tttaatcctctttgcggaagaaatcccaatgaaacggatcttgattaaatcattaatcacaaat 18531467  T
Q  114 caaacagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||    
T  18531468 caaacagaaacttaaacactttaagattcatgtgtttacctcttgaagagtagaacctttgtagaagaaatatttct 18531544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 27309412 - 27309584
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    |||||||||||||||||||| ||||  |||| |||||||||||||||||||||||||||||| ||||  || ||||||||||||||||||||||||||||    
T  27309412 tgaagggattttaagagggggtttttcaaaattttaatcctctttgcggaagaaatcccattgaaacaaatattgattaaatcattaatcacaaatcaaa 27309511  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||    
T  27309512 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcaaaacctttgtagaagaaatatttct 27309584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 27 - 184
Target Start/End: Original strand, 16357900 - 16358058
Alignment:
Q  27 tttaagaggggtttttcaaaaaatt-taatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaacagaaact 125  Q
    |||||||| ||||||||||||  || |||||||||| |||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  16357900 tttaagagaggtttttcaaaattttataatcctcttagcggaacaaatctcattgaaacggatcttgattaaatcattaatcacaaatcaaacagaaatt 16357999  T
Q  126 taaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaat 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16358000 taaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagaagaaat 16358058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 190
Target Start/End: Original strand, 21169282 - 21169440
Alignment:
Q  17 atgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaa 116  Q
    |||||||||||||||||||||  |||  |||| ||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  21169282 atgaagggattttaagaggggggttttcaaaattttgatcctctttgcggaagaaatcccattgaaaaggatcttgattaaatcattaatcacaaatcaa 21169381  T
Q  117 acagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||                |||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  21169382 acagaaa---------------tttcatgtgtttacctcttgaagagcagaacctttgtagaagaaatatttct 21169440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 57 - 182
Target Start/End: Original strand, 22640744 - 22640874
Alignment:
Q  57 ctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaacagaa-----acttaaacactttaagattcatgtgttta 151  Q
    ||||| |||||| |||||||||||||| |||||||||||||||||||||||| |||| || || ||     ||||||||||||||||  |||||||||||    
T  22640744 ctcttagcggaacaaatcccattaaaatggatcttgattaaatcattaatcataaattaatcaaaacacatacttaaacactttaaggatcatgtgttta 22640843  T
Q  152 cctcttgaagagcagaacctttgtagcagaa 182  Q
    ||||||||||  |||||||||||||||||||    
T  22640844 cctcttgaagcacagaacctttgtagcagaa 22640874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 9075751 - 9075900
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatt-taatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaa 116  Q
    ||||||||||| ||||||||||||||||||  || |||||||||| |||||| ||||| |||| |||||| |||||||||||  ||||||||||||||||    
T  9075751 tgaagggatttaaagaggggtttttcaaaattttataatcctcttagcggaacaaatctcattgaaacgggtcttgattaaagaattaatcacaaatcaa 9075850  T
Q  117 acagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaa 182  Q
    |                ||| ||||||||||||||||||||||||||||||| |||||||| ||||    
T  9075851 a----------------ttacgattcatgtgtttacctcttgaagagcagaatctttgtagaagaa 9075900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 82 - 117
Target Start/End: Complemental strand, 25662316 - 25662281
Alignment:
Q  82 aacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||| ||||||||||||||||||||||||||||    
T  25662316 aacggatattgattaaatcattaatcacaaatcaaa 25662281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 145; Significance: 2e-76; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 2652852 - 2653019
Alignment:
Q  22 gggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaacaga 121  Q
    ||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  2652852 gggattttaagaggggtttttcaaaat-tttaatcctctttacggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaataga 2652950  T
Q  122 aacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2652951 aacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 2653019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 11534921 - 11535093
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    |||||||||||||||||||||||||  |||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  11534921 tgaagggattttaagaggggttttttcaaaattttaatcctctttacggaagaaatcccattgaaacggatcttgattaaatcattaatcataaatcaaa 11535020  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11535021 tagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagtagaaatctttct 11535093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 11541840 - 11542011
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11541840 tgaagggattttaagagggttttttcaaaat-tttaatcctctttacggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaa 11541938  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11541939 tagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagtagaaatctttct 11542011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 29329135 - 29328964
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    |||||||||||||||||||| |||||||||  ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29329135 tgaagggattttaagaggggattttcaaaat-tttaatcctctttgcagaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaa 29329037  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  29329036 cagaaacttaaacattttaagattcatgtgtttacctcttgaagagcagaacctttgtagaagaaatatttct 29328964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 12752206 - 12752035
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    |||| |||||||||||||||||||||||||  ||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  12752206 tgaatggattttaagaggggtttttcaaaat-tttaatcctctttacggaagaaatcccattgaaacggatcttaattaaatcattaatcaaaaatcaaa 12752108  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  12752107 aagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagaagaaatatttct 12752035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 15153815 - 15153656
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  15153815 tgaagggattttaagaggggtttttcaaaat-tttaatcctctttgcggaagaaatcccattgaaacggatcttgattaaatcattactcacaaatcaaa 15153717  T
Q  118 cagaaacttaaacacttt-aagattcatgtgtttacctcttgaagagcagaacctttgtag 177  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15153716 cagaaatttaaacactttaaagattcatgtgtttacctcttgaagagcagaacctttgtag 15153656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 12739886 - 12739718
Alignment:
Q  20 aagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaaca 119  Q
    |||||||||||||||||||||||   ||| |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |    
T  12739886 aagggattttaagaggggttttttcgaaattttaattctctttgcggaagaaatcctattgaaacggatcttgattaaatcattaatcacaaatcaaata 12739787  T
Q  120 gaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||| |||||    
T  12739786 gaaacttaaacactttaagattc--gtgtttacctcttgaagagcagaacctttgtagaagaaatatttct 12739718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 21 - 182
Target Start/End: Complemental strand, 9979174 - 9979012
Alignment:
Q  21 agggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccatt-aaaacggatcttgattaaatcattaatcacaaatcaaaca 119  Q
    |||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9979174 agggattttaagaggggtttttgaaaat-tttaatcctctttgcggaagaaatcccattgaaaacggatcttgattaaatcattaatcacaaatcaaaca 9979076  T
Q  120 gaaacttaaacactttaa-gattcatgtgtttacctcttgaagagcagaacctttgtagcagaa 182  Q
     | ||||||| | ||||| ||||||||||||| |||||||||||||||||||||||||| ||||    
T  9979075 catacttaaataatttaaggattcatgtgttttcctcttgaagagcagaacctttgtagtagaa 9979012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 18562386 - 18562217
Alignment:
Q  17 atgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaa 116  Q
    |||||||||||||||||||||||||||||||  |||||| ||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  18562386 atgaagggattttaagaggggtttttcaaaat-tttaatactctttgaggaagaaatctcattgaaacggatcttgattaaatcattaatcacaaatcaa 18562288  T
Q  117 acagaaacttaaacactttaa-----gattcatgtgtttacctcttgaagagcagaacctttgtagcagaa 182  Q
    ||| | |||||||||||||||     ||||||| |||||||||||||||||||||||||||||||| ||||    
T  18562287 acacatacttaaacactttaattaaggattcatttgtttacctcttgaagagcagaacctttgtagtagaa 18562217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 20 - 177
Target Start/End: Original strand, 18256679 - 18256836
Alignment:
Q  20 aagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaaca 119  Q
    ||||||||| |||||||||||||||||| ||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  18256679 aagggatttaaagaggggtttttcaaaa-atttaatcctcttagcggaacaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaaca 18256777  T
Q  120 gaaacttaaacacttta-agattcatgtgtttacctcttgaagagcagaacctttgtag 177  Q
     | ||||||||| ||||  ||||||||||||| |||||||||||| ||||| |||||||    
T  18256778 catacttaaacaatttagggattcatgtgtttgcctcttgaagagaagaacttttgtag 18256836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 11557075 - 11557199
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    |||||||||||||||||||| |||| ||||  ||||| | ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  11557075 tgaagggattttaagagggggtttttaaaat-tttaaccgtctttgcggaagaaatctcattgaaacggatcttgattaaatcattaatcacaaatcaaa 11557173  T
Q  118 cagaaacttaaacactttaagattca 143  Q
    ||||||||||||||||||||||||||    
T  11557174 cagaaacttaaacactttaagattca 11557199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 85 - 182
Target Start/End: Complemental strand, 30926378 - 30926279
Alignment:
Q  85 ggatcttgattaaatcattaatcacaaatcaaacagaaacttaaacac-tttaag-attcatgtgtttacctcttgaagagcagaacctttgtagcagaa 182  Q
    ||||| ||||||||||||||||| ||||||||||| | | ||| |||| |||||| || |||||||||||||||| ||  ||| ||||||||||||||||    
T  30926378 ggatcatgattaaatcattaatcgcaaatcaaacacatatttatacacttttaagcatccatgtgtttacctcttaaatcgcaaaacctttgtagcagaa 30926279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 117
Target Start/End: Complemental strand, 7748248 - 7748213
Alignment:
Q  82 aacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||||||||||||||||||||||||||||    
T  7748248 aacggatcttgattaaatcattaatcacaaatcaaa 7748213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 22947653 - 22947697
Alignment:
Q  94 ttaaatcattaatcacaaatcaaacagaaacttaaacactttaag 138  Q
    |||||||||||||||||||||||||||| | |||||| |||||||    
T  22947653 ttaaatcattaatcacaaatcaaacagataattaaaccctttaag 22947697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 116
Target Start/End: Complemental strand, 30918068 - 30918034
Alignment:
Q  82 aacggatcttgattaaatcattaatcacaaatcaa 116  Q
    |||||||| ||||||||||||||||||||||||||    
T  30918068 aacggatcatgattaaatcattaatcacaaatcaa 30918034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 141; Significance: 4e-74; HSPs: 1)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 4064 - 3893
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    |||||||||||||||||| |||||||||||  ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4064 tgaagggattttaagaggagtttttcaaaat-tttaatcctctttacggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaa 3966  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  3965 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagaagaaatatttct 3893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 141; Significance: 4e-74; HSPs: 1)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 8455 - 8284
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||    
T  8455 tgaagggattttaagaggggtttttcaaaat-tttaatcctctttgcggaagaaatcccattgaaacgaatcttgattaaatcattaaacacaaatcaaa 8357  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  8356 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagaagaaatatttct 8284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 141; Significance: 4e-74; HSPs: 2)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 10071 - 10243
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    |||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10071 tgaagggattttaagaggggttttttcaaaattttaatcctctttgcggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaa 10170  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
     ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||    
T  10171 tagaaacttaaacactttaagattcatgtgtttacctcttgacgagcagaacctttgtagaagaaatatttct 10243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 1178 - 1350
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    |||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||     
T  1178 tgaagggattttaagaggggttttttcaaaattttaatcctctttgcggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaat 1277  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
     ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||    
T  1278 tagaaacttaaacactttaagattcatgtgtttacctcttgacgagcagaacctttgtagaagaaatatttct 1350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 139; Significance: 6e-73; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 21942012 - 21941843
Alignment:
Q  20 aagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaaca 119  Q
    ||||||||||||||||||||||||||||  ||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||| |    
T  21942012 aagggattttaagaggggtttttcaaaat-tttaatcctctatgcggaaaaaatctcattgaaacggatcttgattaaatcattaatcacaaatcaaata 21941914  T
Q  120 gaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21941913 gaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 21941843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 6095492 - 6095322
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  6095492 tgaagggattttaagaggg-tttttcaaaat-tttaatcctctttgcggaagaaatcccattgaaacggatcttgattaaatcattaatcactaatcaaa 6095395  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
     ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  6095394 tagaaatttaaatactttaagattcatgtgtttacctcttgaagagcagaacctttgtagaagaaatatttct 6095322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 15327569 - 15327399
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||| ||||| ||||||||||||  |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  15327569 tgaagggattt-aagagaggtttttcaaaat-tttaatcctctttgcggaagaaatcccattgaaacggatattgattaaatcattaatcacaaatcaaa 15327472  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
     |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||    
T  15327471 tagaaacttaaacactttaagattcatgtgtttacctcttgaagagctgaacctttgtagaagaaatatttct 15327399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 15507938 - 15507768
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||| ||||| ||||||||||||  |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  15507938 tgaagggattt-aagagaggtttttcaaaat-tttaatcctctttgcggaagaaatcccattgaaacggatattgattaaatcattaatcacaaatcaaa 15507841  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
     |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||    
T  15507840 tagaaacttaaacactttaagattcatgtgtttacctcttgaagagctgaacctttgtagaagaaatatttct 15507768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 14 - 190
Target Start/End: Complemental strand, 22172840 - 22172661
Alignment:
Q  14 atcatgaagggattttaagaggggtttttcaaaaaattt---aatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcaca 110  Q
    ||||||||||||||||||||| |||||||   |||||||   ||||| ||| |||||| |||||||||| |||||||||||||||||||||||||||| |    
T  22172840 atcatgaagggattttaagagaggtttttttcaaaattttataatccgcttagcggaacaaatcccattgaaacggatcttgattaaatcattaatcata 22172741  T
Q  111 aatcaaacagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  22172740 aatcaaacagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagaagaaatatttct 22172661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 24 - 170
Target Start/End: Complemental strand, 28549376 - 28549230
Alignment:
Q  24 gattttaagag-gggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaacagaa 122  Q
    ||||||||||| |||||||||| ||  ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  28549376 gattttaagagagggtttttcacaat-tttaatcctctttgcggaagaaatctcattgaaacggatcttgattaaatcattaatcacaaatcaaacagaa 28549278  T
Q  123 acttaaacactttaagattcatgtgtttacctcttgaagagcagaacc 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28549277 acttaaacactttaagattcatgtgtttacctcttgaagagcagaacc 28549230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 52 - 176
Target Start/End: Complemental strand, 24644263 - 24644138
Alignment:
Q  52 taatcctctttgcggaagaaatcccatt-aaaacggatcttgattaaatcattaatcacaaatcaaacagaaacttaaacactttaagattcatgtgttt 150  Q
    |||||||||| |||||| |||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24644263 taatcctcttagcggaacaaattccattgaaaacggatcttgattaaatcattaatcacaaatcaaatagaaacttaaacactttaagattcatgtgttt 24644164  T
Q  151 acctcttgaagagcagaacctttgta 176  Q
    ||||||||||||||||||||||||||    
T  24644163 acctcttgaagagcagaacctttgta 24644138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 24 - 184
Target Start/End: Original strand, 24795853 - 24796012
Alignment:
Q  24 gattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccatt-aaaacggatcttgattaaatcattaatcacaaatcaaacagaa 122  Q
    |||||||||||||||| |||||||  |||||||||||| |||||| ||||  |||| ||||||||| || ||||||||||||||||||||||||||| ||    
T  24795853 gattttaagaggggttattcaaaat-tttaatcctcttagcggaacaaatttcattgaaaacggattttcattaaatcattaatcacaaatcaaacacaa 24795951  T
Q  123 ac-ttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaat 184  Q
    || ||||||||||   ||||||||||||||| |||||||| ||| ||||||||||||| ||||    
T  24795952 actttaaacactt--ggattcatgtgtttacgtcttgaagcgcataacctttgtagcataaat 24796012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 29230706 - 29230589
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||| ||||||| ||||| ||||  ||||||| |||| |||||| ||||| |||| |||| ||||||||||||||||| ||||||||||||||    
T  29230706 tgaagggatttcaagagggtttttttaaaat-tttaatcatcttagcggaataaatctcattgaaacagatcttgattaaatcatcaatcacaaatcaaa 29230608  T
Q  118 cagaaacttaaacacttta 136  Q
    || ||||||||||| ||||    
T  29230607 cacaaacttaaacatttta 29230589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 27660698 - 27660795
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccatt-aaaacggatcttgattaaatcattaatcacaaatca 115  Q
    |||| |||||||||||| ||||||||||||  |||||||||||| ||||||||||||||||| |||| | ||||||||||||||||| |||||||||||    
T  27660698 tgaaaggattttaagagaggtttttcaaaat-tttaatcctcttagcggaagaaatcccattgaaaatgaatcttgattaaatcatttatcacaaatca 27660795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 177
Target Start/End: Complemental strand, 17089347 - 17089259
Alignment:
Q  93 attaaatcattaatcacaaat---caaacagaaacttaaacactttaa-gattcatgtgtttacctcttgaagagcagaacctttgtag 177  Q
    ||||||||| |||||||| ||   |||||| | ||||||| | ||||| |||||||||||||||||||||||| ||| ||| |||||||    
T  17089347 attaaatcaataatcacagattaacaaacacatacttaaatattttaaagattcatgtgtttacctcttgaagtgcataacatttgtag 17089259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1199 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold1199
Description:

Target: scaffold1199; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 472 - 301
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||||||||||||||||||||||  ||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  472 tgaagggattttaagaggggtttttcaaaat-tttaatcctcttttctgaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaa 374  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  373 tagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagaagaaatatttct 301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 133; Significance: 2e-69; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 19660 - 19489
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19660 tgaagggattttaagaggagtttttcaaaaa-tttaatcctctttgcggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaa 19562  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
     |||||||||||||||||||||||||||||||||||| |||||||||| || |||||||| |||||| |||||    
T  19561 tagaaacttaaacactttaagattcatgtgtttaccttttgaagagcacaatctttgtagaagaaatatttct 19489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 21 - 191
Target Start/End: Complemental strand, 26557 - 26388
Alignment:
Q  21 agggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaacag 120  Q
    |||| ||||||||||||||||||||||  ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  26557 aggggttttaagaggggtttttcaaaat-tttaatcctctttacggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaatag 26459  T
Q  121 aaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttctt 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||    
T  26458 aaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagtataaatttttctt 26388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 129; Significance: 6e-67; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 4587 - 4416
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    |||||||||||| |||||||||||||||||  |||||||||||||   ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  4587 tgaagggattttgagaggggtttttcaaaat-tttaatcctctttatagaataaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaa 4489  T
Q  118 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  4488 cagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagaagaaatatttct 4416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 129; Significance: 6e-67; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 5060 - 5227
Alignment:
Q  22 gggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaacaga 121  Q
    ||||| || |||||||||||| ||||  |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  5060 gggatatttagaggggttttttaaaat-tttaatcctctttgcggaagaaatcccaatgaaacggatcttgattaaatcattaatcacaaatcaaacaga 5158  T
Q  122 aacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  5159 aacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagaagaaatatttct 5227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 129; Significance: 6e-67; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 24694351 - 24694491
Alignment:
Q  50 tttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaacagaaacttaaacactttaagattcatgtgtt 149  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24694351 tttaatcctctttacggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaatagaaacttaaacactttaagattcatgtgtt 24694450  T
Q  150 tacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24694451 tacctcttgaagagcagaacctttgtagcagaaatctttct 24694491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 24701120 - 24701260
Alignment:
Q  50 tttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaacagaaacttaaacactttaagattcatgtgtt 149  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24701120 tttaatcctctttacggaagaaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaatagaaacttaaacactttaagattcatgtgtt 24701219  T
Q  150 tacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24701220 tacctcttgaagagcagaacctttgtagcagaaatctttct 24701260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 27 - 177
Target Start/End: Original strand, 18565324 - 18565475
Alignment:
Q  27 tttaagaggggtttttcaaaaaatt-taatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaacagaaact 125  Q
    |||||||| ||||||||||||  || |||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18565324 tttaagagaggtttttcaaaattttataatcctcttagcggaataaatcccattgaaacggatcttgattaaatcattaatcacaaatcaaacagaaact 18565423  T
Q  126 taaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtag 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18565424 taaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtag 18565475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 50 - 160
Target Start/End: Original strand, 19713397 - 19713508
Alignment:
Q  50 tttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaacagaaacttaaacactttaa-gattcatgtgt 148  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||| | ||||||||| ||||| |||||||||||    
T  19713397 tttaatcctctttgcggaagaaatctcattgaaacggatcttgattaaattattaatcacaaatcaaacacatacttaaacaatttaaggattcatgtgt 19713496  T
Q  149 ttacctcttgaa 160  Q
    ||||||||||||    
T  19713497 ttacctcttgaa 19713508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 28718819 - 28718960
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||| ||||||| ||||||||||  |||||| ||||| || ||| ||||||| || ||||| |||||||||||||||||||||||||||||||    
T  28718819 tgaagggatttaaagaggg-tttttcaaaa--tttaatactcttggcagaacaaatcccgttgaaacgaatcttgattaaatcattaatcacaaatcaaa 28718915  T
Q  118 cagaaacttaaacactttaa-gattcatgtgtttacctcttgaag 161  Q
       |||||||||| |||||| | ||||||||||||||||||||||    
T  28718916 accaaacttaaacgctttaagggttcatgtgtttacctcttgaag 28718960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 39539879 - 39539713
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatc--a 115  Q
    ||||||||||| ||||||||||| || |||| |||||||| |||   |||| ||||| ||| ||| |||||||||||||||| ||||||||||||||  |    
T  39539879 tgaagggatttcaagaggggtttatcgaaaattttaatccgcttaatggaacaaatctcatgaaa-cggatcttgattaaataattaatcacaaatcata 39539781  T
Q  116 aacagaaacttaaacactttaa-gattcatgtgtttacctcttgaagagcagaacctttgtagcagaa 182  Q
    | || | ||||||||||||||| ||||| || ||||| | ||||||| ||||||||||||||||||||    
T  39539780 agcacatacttaaacactttaaggattcctgagtttatcccttgaagtgcagaacctttgtagcagaa 39539713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 25 - 119
Target Start/End: Original strand, 22546232 - 22546323
Alignment:
Q  25 attttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaaca 119  Q
    |||||||||||||||||||||||  |||||||||||| || ||| |||||||   | ||| |||||||||||||| |||||||||||||||||||    
T  22546232 attttaagaggggtttttcaaaat-tttaatcctcttagcagaataaatcccg--agaacagatcttgattaaattattaatcacaaatcaaaca 22546323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 938385 - 938477
Alignment:
Q  22 gggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||| ||||||||||||||  ||||||  |||| |||||||||||| |||| ||||| || ||||| ||||||||||||||||||||||    
T  938385 gggattttaaggggggtttttcaaaat-tttaattttcttagcggaagaaatctcattgaaacgaat-ttgat-aaatcattaatcacaaatcaaa 938477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 119
Target Start/End: Original strand, 17297916 - 17297953
Alignment:
Q  82 aacggatcttgattaaatcattaatcacaaatcaaaca 119  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  17297916 aacggatattgattaaatcattaatcacaaatcaaaca 17297953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 119
Target Start/End: Original strand, 17314000 - 17314029
Alignment:
Q  90 ttgattaaatcattaatcacaaatcaaaca 119  Q
    ||||||||||||||||||||||||||||||    
T  17314000 ttgattaaatcattaatcacaaatcaaaca 17314029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 3e-62; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 31 - 190
Target Start/End: Original strand, 22790704 - 22790864
Alignment:
Q  31 agaggggtttttcaaaaaatt-taatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaacagaaacttaaa 129  Q
    |||||||||||||||||  || |||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||||    
T  22790704 agaggggtttttcaaaattttataatcctctttgcggaagaaatcccattgaaattgatcttgattaaatcattaatcacaaatcaaacaaaaacttaaa 22790803  T
Q  130 cactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  22790804 cactttaagattcatgtgtttacctcttgaagagcagaacctttgtagaagaaatatttct 22790864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 18621184 - 18621020
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    |||||||||||||||| |||||||||||||  ||||||||||||||||||| ||||| |||| ||||||||||||||||||| |||||||||||||||||    
T  18621184 tgaagggattttaagaagggtttttcaaaat-tttaatcctctttgcggaataaatctcattgaaacggatcttgattaaatgattaatcacaaatcaaa 18621086  T
Q  118 cagaaacttaaacactttaag-attcatgtgtttacctcttgaagagcagaacctttgtagcagaa 182  Q
    || | | ||||||| |||||| |||||||||||||||||||||| |||| ||||||| ||||||||    
T  18621085 cacatagttaaacaatttaagaattcatgtgtttacctcttgaaaagcataacctttatagcagaa 18621020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 41665115 - 41664949
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||| ||||||| ||||| ||||  |||||||||||| ||| || ||||  |||||||| |||||||||||||||||||||||||||||||||    
T  41665115 tgaagggatttaaagagggcttttttaaaat-tttaatcctcttagcgtaacaaatatcattaaaatggatcttgattaaatcattaatcacaaatcaaa 41665017  T
Q  118 cagaaacttaaacactttaa-gattc--atgtgtttacctcttgaagagcagaacctttgtagcagaa 182  Q
    || | ||||||||| ||||| |||||  ||||||||||||||||||||||||||| ||||||| ||||    
T  41665016 cacatacttaaacaatttaaggattcatatgtgtttacctcttgaagagcagaacatttgtagtagaa 41664949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 178
Target Start/End: Complemental strand, 27353696 - 27353546
Alignment:
Q  20 aagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacg-----gatcttgattaaatcattaatcacaaatc 114  Q
    |||| ||| |||||||||||||||||||  |||||| ||||| |||||| |||| ||||| |||||     |||||||||||||||||||||||||||      
T  27353696 aaggtattctaagaggggtttttcaaaat-tttaattctcttagcggaacaaattccattgaaacgaaacagatcttgattaaatcattaatcacaaa-- 27353600  T
Q  115 aaacagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagc 178  Q
             | |||||||||||||||| ||||||||||||||||||| |||||| |||||||||    
T  27353599 ---------cataaacactttaagatt-atgtgtttacctcttgaagcgcagaatctttgtagc 27353546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 12299072 - 12298996
Alignment:
Q  86 gatcttgattaaatcattaatcacaaatcaaacagaaacttaaacactttaa-gattcatgtgtttacctcttgaag 161  Q
    ||||||||||| ||||||||||| ||||  || | | |||||||||||||||  ||||||||||||||| |||||||    
T  12299072 gatcttgattatatcattaatcataaatataatacatacttaaacactttaatcattcatgtgtttaccccttgaag 12298996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0705 (Bit Score: 114; Significance: 5e-58; HSPs: 1)
Name: scaffold0705
Description:

Target: scaffold0705; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 7497 - 7670
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatt-taatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaa 116  Q
    ||||||||||||||||| |||||||| |||  || |||||||||  |||||| ||||| |||| ||||||||||||||||||||||||||||||||||||    
T  7497 tgaagggattttaagagaggtttttccaaattttataatcctctaagcggaacaaatcacattgaaacggatcttgattaaatcattaatcacaaatcaa 7596  T
Q  117 acagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||    
T  7597 aaagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaacctttgtagaaaaaatatttct 7670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 107107 - 107270
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    ||||||||||| ||||| ||||||||||||| ||||||| |||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  107107 tgaagggatttaaagagaggtttttcaaaaa-tttaatc-tcttagcgaaacaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 107204  T
Q  118 cagaaacttaaacactttaa-gattcatgtgtttacctcttgaagagcagaacctttgtagcagaa 182  Q
    || | ||||||||| ||||| ||||||||||||||||||| |||||||| ||||||||||| ||||    
T  107205 cacatacttaaacaatttaaggattcatgtgtttacctctggaagagcataacctttgtagaagaa 107270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 6877 - 6712
Alignment:
Q  18 tgaagggatttta-agaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaa 116  Q
    ||||||||||| | |||||||||||||||||  |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||    
T  6877 tgaagggatttaatagaggggtttttcaaaat-tttaatcctctttgcggaagaaatcccattgaaatggatcttgattaaatcattaatcaccaatcaa 6779  T
Q  117 acagaaacttaaacactttaa-gattcatgtgtttacctcttgaagagcagaacctttgtagcagaa 182  Q
    ||| | ||||||||| || || |||||||||||||||| ||  ||||||||||||||||||| ||||    
T  6778 acacatacttaaacaattaaaggattcatgtgtttaccactcaaagagcagaacctttgtagtagaa 6712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303 (Bit Score: 89; Significance: 4e-43; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 70 - 190
Target Start/End: Original strand, 892 - 1012
Alignment:
Q  70 aaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaacagaaacttaaacactttaagattcatgtgtttacctcttgaagagcagaac 169  Q
    |||||||||| ||| |||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  892 aaatcccattgaaatggatcttgcttaaatcattaatcacaaatcaaacaaaaacttaaacacttcaagattcatgtgtttacctcttgaagaacagaac 991  T
Q  170 ctttgtagcagaaatctttct 190  Q
    |||||||| |||||| |||||    
T  992 ctttgtagaagaaatatttct 1012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 88059 - 87900
Alignment:
Q  18 tgaagggattttaagaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaa 117  Q
    |||||||||||||||||||||||||| ||   ||||||||||| ||||||||||||  |||| ||||||||||||||||||| ||| ||||| |||||||    
T  88059 tgaagggattttaagaggggtttttccaatc-tttaatcctctatgcggaagaaatttcattgaaacggatcttgattaaattatttatcactaatcaaa 87961  T
Q  118 cagaaacttaaacacttt-aagattcatgtgtttacctcttgaagagcagaacctttgtag 177  Q
    || | || |||||| ||| |||||||||| |||||||||||||||||||||||||||||||    
T  87960 cacatacataaacaatttaaagattcatgagtttacctcttgaagagcagaacctttgtag 87900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 45 - 190
Target Start/End: Complemental strand, 367 - 222
Alignment:
Q  45 aaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaaatcattaatcacaaatcaaacagaaacttaaacactttaagattcat 144  Q
    |||| |||||||||||  || ||| |||||||||| || ||||||||||||||||||||||||| |||||||| |    |||||||||||||| ||||||    
T  367 aaaattttaatcctctcagcagaataaatcccattgaatcggatcttgattaaatcattaatcaaaaatcaaaaatgttcttaaacactttaaaattcat 268  T
Q  145 gtgtttacctcttgaagagcagaacctttgtagcagaaatctttct 190  Q
    ||||||| ||||||||||| ||||||||||||||| |||| |||||    
T  267 gtgtttatctcttgaagagtagaacctttgtagcaaaaatgtttct 222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 18 - 176
Target Start/End: Original strand, 229242 - 229404
Alignment:
Q  18 tgaagggatttta-agaggggtttttcaaaaaatttaatcctctttgcggaagaaatcccattaaaacggatcttgattaa---atcattaatcacaaat 113  Q
    ||||||||||| | |||||| |||||| |||  ||||||||||||||||||||||||  |||| ||||| |||||||||||   || |||||||||||||    
T  229242 tgaagggatttaatagagggttttttccaaat-tttaatcctctttgcggaagaaatttcattgaaacgaatcttgattaaattattattaatcacaaat 229340  T
Q  114 caaacagaaacttaaacactttaa-gattcatgtgtttacctcttgaagagcagaacctttgta 176  Q
    |||||| | ||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||    
T  229341 caaacacatacttaaacaatttaaggattcatgtgtttacctctagaagagcagaacctttgta 229404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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