View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15062_low_20 (Length: 291)
Name: NF15062_low_20
Description: NF15062
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15062_low_20 |
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Alignment Details
Target: chr8 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 18 - 281
Target Start/End: Original strand, 34650054 - 34650317
Alignment:
| Q |
18 |
ataagctccaacacaaacaaaggaagcaatgaccaccaccaaacaggttaatttacattgcatgatga---atgcacgtatattactataataataatat |
114 |
Q |
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| T |
34650054 |
ataagctccaacacaaacaaaggaaacaatgaccaccaccaaacaggttaatttacattgcatgatgatgaatgcacgtatattactataa---taatat |
34650150 |
T |
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| Q |
115 |
agatctcatctaataatttattatacattgaatttgtgcagatggatgtagagagaaatgatcatgaaaaactgaagcatcttgggtttgtgagaattgc |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34650151 |
agatctcatctaataatttattatacattgaatttgtgcagatggatgtagagagaaatgatcatgaaaaactgaagcatcttgggtttgtgagaattgc |
34650250 |
T |
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| Q |
215 |
tgctattcatgcttttgtttgcatgtcgagtctgtatgactatgcaaaacaaaactcaggacctttg |
281 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34650251 |
tgctattcatgcttttgtttgcatgtcgagtctgtatgactatgcaaaacaaaactcaggacctttg |
34650317 |
T |
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