View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15062_low_28 (Length: 245)
Name: NF15062_low_28
Description: NF15062
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15062_low_28 |
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Alignment Details
Target: chr4 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 2816513 - 2816272
Alignment:
| Q |
1 |
ttcctaatttttctgatgaacgacgtatatcggtatttaaataccgtagcaattatgactcccatgacttatatgactttttatgactttgatgagaaaa |
100 |
Q |
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| T |
2816513 |
ttcccaatttttctgacgaacaacgtatatcggtatttaaataccgtagcaattatgactcccatgacttagatgactttttatgactttgatgagaaaa |
2816414 |
T |
|
| Q |
101 |
taaatatgtatgaatatcgaaattgtgtgtgttgaatgaatttaaatgtgtatattggaaccgaatatgtatgaatgttgatatttgagtcctctttgta |
200 |
Q |
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| T |
2816413 |
taaatatctatgaatatcgaaattgtgtgtgttgaatgaatttaaatgtgtatattggaaccgaatatgtatgaatgttgatatttgagtcctctttgta |
2816314 |
T |
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| Q |
201 |
agctttcttcaacccgaatgtaattttaacttatttcatctc |
242 |
Q |
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||||||||||||||||||| |||||||||||||||||||||| |
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| T |
2816313 |
agctttcttcaacccgaatataattttaacttatttcatctc |
2816272 |
T |
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