View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15063_high_1 (Length: 447)

Name: NF15063_high_1
Description: NF15063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15063_high_1
NF15063_high_1
[»] chr2 (22 HSPs)
chr2 (18-447)||(39215625-39216055)
chr2 (19-383)||(39161836-39162200)
chr2 (19-383)||(39206994-39207358)
chr2 (114-326)||(39192220-39192436)
chr2 (114-383)||(39197844-39198116)
chr2 (114-216)||(39222932-39223037)
chr2 (147-289)||(39370254-39370399)
chr2 (19-383)||(39388817-39389186)
chr2 (143-280)||(39381275-39381412)
chr2 (19-65)||(39468333-39468379)
chr2 (143-188)||(39421688-39421733)
chr2 (19-89)||(39370102-39370172)
chr2 (143-180)||(39468448-39468485)
chr2 (26-69)||(39381510-39381553)
chr2 (19-69)||(39192439-39192489)
chr2 (19-69)||(39198119-39198169)
chr2 (26-68)||(39459253-39459295)
chr2 (222-275)||(39223101-39223154)
chr2 (354-383)||(39468634-39468663)
chr2 (354-383)||(39478833-39478862)
chr2 (353-381)||(39381166-39381194)
chr2 (136-180)||(39459387-39459431)
[»] chr5 (2 HSPs)
chr5 (143-383)||(33561135-33561380)
chr5 (148-188)||(17059602-17059642)
[»] chr7 (1 HSPs)
chr7 (144-240)||(19807963-19808059)
[»] chr6 (2 HSPs)
chr6 (19-65)||(16113293-16113339)
chr6 (143-180)||(16113441-16113478)
[»] chr8 (1 HSPs)
chr8 (159-274)||(45342187-45342305)


Alignment Details
Target: chr2 (Bit Score: 381; Significance: 0; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 18 - 447
Target Start/End: Original strand, 39215625 - 39216055
Alignment:
Q  18 aaaggagttcaagttaaaagagaagcagtttggaggacaagtcaaggatcctaagttaaagttgaaaaaattcgatttacgaccgacgaagcttgggtca 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39215625 aaaggagttcaagttaaaagagaagcagtttggaggacaagtcaaggatcctaagttaaagttgaaaaaattcgatttacgaccgacgaagcttgggtca 39215724  T
Q  118 aggaaaaaatatattgaagaaacacaatcgggtaaatgttcttattcatctagtttattgaaagagtttcaatacaacggttcctcttaatgatgatgac 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39215725 aggaaaaaatatattgaagaaacacaatcgggtaaatgttcttattcatctagtttattgaaagagtttcaatacaacggttcctcttaatgatgatgac 39215824  T
Q  218 aatttttataacccgatctacatagttgtttaaaaatatttttaatcatgttaatgttttatgtctttgtcatattgaaattttgtctagttttcatatc 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  39215825 aatttttataacccgatctacatagttgtttaaaaatatttttaatcatgttaatgttttatgtctttgtcatattgaaattttttctagttttcatatc 39215924  T
Q  318 acacccacacattgtcaaacaaatttgtatggtatatttcacccttgaacattttatgaatctctttactgc-nnnnnnnnnnctcacgtttttattcat 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           |||||||||||||||||    
T  39215925 acacccacacattgtcaaacaaatttgtatggtatatttcacccttgaacattttatgaatctctttactgcaaaaaaaaaaactcacgtttttattcat 39216024  T
Q  417 ggctaaagtttaattataatcctatgctact 447  Q
    ||||||||||||||||||||| |||| ||||    
T  39216025 ggctaaagtttaattataatcttatgatact 39216055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 19 - 383
Target Start/End: Original strand, 39161836 - 39162200
Alignment:
Q  19 aaggagttcaagttaaaagagaagcagtttggaggacaagtcaaggatcctaagttaaagttgaaaaaattcgatttacgaccgacgaagcttgggtcaa 118  Q
    |||||| |||| |||||||| ||||| |||| ||||||||||||||||||||||| |||| |||| ||||| |||  || ||  | | ||| || |||||    
T  39161836 aaggagctcaacttaaaagaaaagcaatttgaaggacaagtcaaggatcctaagtcaaagatgaataaatttgatggacaactaaaggagcctgagtcaa 39161935  T
Q  119 ggaaaaaatatattgaaga---aacacaatcgggtaaatgttcttattcatctagtttattgaaagagtttcaatacaacggttcctcttaatgatgatg 215  Q
    |||||||||||||||| ||   || | |||| ||||||||||||| ||||||||| ||||||||||| ||| | || ||| |||||| ||||||||||||    
T  39161936 ggaaaaaatatattgatgaggaaaaagaatccggtaaatgttcttcttcatctagattattgaaagaattttattataactgttccttttaatgatgatg 39162035  T
Q  216 acaatttttataacccgatctacatagttgtttaaaaatatttttaatcatgttaatgttttatgtctttgtcatattgaaattttgtctagttttcata 315  Q
    | | |||||  | || ||||||| || || |||||| |  |||||| ||||||||||||| |||||||| ||||| |  |||  || || || |||||||    
T  39162036 atattttttgaatcctgatctacttaattttttaaacacgtttttactcatgttaatgttgtatgtcttagtcatttgaaaagcttttccagatttcata 39162135  T
Q  316 tcacacccacacattgtcaaacaaatttgtatggtatatttcacccttgaacattttatgaatctctt 383  Q
    ||||||||| ||  | |||||||||| || ||  ||| ||| |||||||||| ||||||| |||||||    
T  39162136 tcacacccagac--tttcaaacaaatctgaattatat-ttttacccttgaactttttatgtatctctt 39162200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 19 - 383
Target Start/End: Complemental strand, 39207358 - 39206994
Alignment:
Q  19 aaggagttcaagttaaaagagaagcagtttggaggacaagtcaaggatcctaagttaaagttgaaaaaattcgatttacgaccgacgaagcttgggtcaa 118  Q
    |||||| |||| |||||||| ||||| |||| ||||||||||||||||||||||| |||| |||| ||||| |||  || ||  | | ||| || |||||    
T  39207358 aaggagctcaacttaaaagaaaagcaatttgaaggacaagtcaaggatcctaagtcaaagatgaataaatttgatggacaactaaaggagcctgagtcaa 39207259  T
Q  119 ggaaaaaatatattgaaga---aacacaatcgggtaaatgttcttattcatctagtttattgaaagagtttcaatacaacggttcctcttaatgatgatg 215  Q
    |||||||||||||||| ||   || | |||| ||||||||||||| ||||||||| ||||||||||| ||| | || ||| |||||| ||||||||||||    
T  39207258 ggaaaaaatatattgatgaggaaaaagaatccggtaaatgttcttcttcatctagattattgaaagaattttattataactgttccttttaatgatgatg 39207159  T
Q  216 acaatttttataacccgatctacatagttgtttaaaaatatttttaatcatgttaatgttttatgtctttgtcatattgaaattttgtctagttttcata 315  Q
    | | |||||  | || ||||||| || || |||||| |  |||||| ||||||||||||| |||||||| ||||| |  |||  || || || |||||||    
T  39207158 atattttttgaatcctgatctacttaattttttaaacacgtttttactcatgttaatgttgtatgtcttagtcatttgaaaagcttttccagatttcata 39207059  T
Q  316 tcacacccacacattgtcaaacaaatttgtatggtatatttcacccttgaacattttatgaatctctt 383  Q
    ||||||||| ||  | |||||||||| || ||  ||| ||| |||||||||| ||||||| |||||||    
T  39207058 tcacacccagac--tttcaaacaaatctgaattatat-ttttacccttgaactttttatgtatctctt 39206994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 114 - 326
Target Start/End: Complemental strand, 39192436 - 39192220
Alignment:
Q  114 gtcaaggaaaaaatatattgaaga---aacacaatcgggtaaatgttcttattcatctagtttattgaaagagtttcaatacaacggttcctcttaatga 210  Q
    |||||||||||| |||||||| ||   || | |||| ||||||||| |||||||||||  |||||||| ||| ||||| | ||||  |||||||||||||    
T  39192436 gtcaaggaaaaagtatattgatgaggaaaaagaatcaggtaaatgtgcttattcatcttatttattgacagaatttcattgcaactattcctcttaatga 39192337  T
Q  211 tgatgacaatttttataacccgatctacatagttgtttaaaaatatttttaatcatgttaatgttttatgtctttgtcatattg-aaattttgtctagtt 309  Q
    |||||| | ||||||||||  ||||||| || || |||||||| ||||||||||||||||||||| ||||| || ||||  ||| |||  || || ||||    
T  39192336 tgatgatattttttataacatgatctacttaattctttaaaaacatttttaatcatgttaatgttctatgtattagtcaatttgaaaagattttccagtt 39192237  T
Q  310 ttcatatcacacccaca 326  Q
    ||||||||||| |||||    
T  39192236 ttcatatcacatccaca 39192220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 114 - 383
Target Start/End: Complemental strand, 39198116 - 39197844
Alignment:
Q  114 gtcaaggaaaaaatatattgaaga---aacacaatcgggtaaatgttcttattcatctagtttattgaaagagtttcaatacaacggttcctcttaatga 210  Q
    |||||||||||| |||||||| ||   || | |||| ||||||||| |||||||||||  |||||||| ||| ||||| | ||||  |||||||||||||    
T  39198116 gtcaaggaaaaagtatattgatgaggaaaaagaatcaggtaaatgtgcttattcatcttatttattgacagaatttcattgcaactattcctcttaatga 39198017  T
Q  211 tgatgacaatttttataacccgatctacatagttgtttaaaaatatttttaatcatgttaatgttttatgtctttgtcatattg-aaattttgtctagtt 309  Q
    |||||| | ||||||||||  ||||||| || || |||||||| ||||||||||||||||||||| ||||| || ||||  ||| |||  || ||  |||    
T  39198016 tgatgatattttttataacatgatctacttaattctttaaaaacatttttaatcatgttaatgttctatgtattagtcaatttgaaaagattttcccgtt 39197917  T
Q  310 ttcatatcacacccacacattgtcaaacaaatttgtatggtatatt-tcacccttgaacattttatgaatctctt 383  Q
    ||||| ||||| ||||| | |||||||| |||||  ||  ||| || ||||||||||||||| |||| |||||||    
T  39197916 ttcatttcacatccacagactgtcaaactaatttcgat--tatcttgtcacccttgaacattatatgtatctctt 39197844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 216
Target Start/End: Original strand, 39222932 - 39223037
Alignment:
Q  114 gtcaaggaaaaaatatattga---agaaacacaatcgggtaaatgttcttattcatctagtttattgaaagagtttcaatacaacggttcctcttaatga 210  Q
    |||||||||||||||||||||   ||||| | |||||||||||||||||||||||||| ||||||||||| | ||||  |||||| ||||||||||||||    
T  39222932 gtcaaggaaaaaatatattgatggagaaaaagaatcgggtaaatgttcttattcatcttgtttattgaaaaaatttctttacaactgttcctcttaatga 39223031  T
Q  211 tgatga 216  Q
    ||||||    
T  39223032 tgatga 39223037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 147 - 289
Target Start/End: Original strand, 39370254 - 39370399
Alignment:
Q  147 gggtaaatgttcttattcatctagtttattgaaagagtttcaatacaacggttcctctta---atgatgatgacaatttttataacccgatctacatagt 243  Q
    ||||||||||||||||||||||||||||||||   | ||||| || ||  ||||| ||||   |||||||||| | |||||||||||||||||| |||||    
T  39370254 gggtaaatgttcttattcatctagtttattgatttaatttcattataattgttccacttaatgatgatgatgatattttttataacccgatctatatagt 39370353  T
Q  244 tgtttaaaaatatttttaatcatgttaatgttttatgtctttgtca 289  Q
    | | |||||| ||| ||||||||||||||||| |||||||| ||||    
T  39370354 tctataaaaacattcttaatcatgttaatgttgtatgtcttggtca 39370399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 383
Target Start/End: Complemental strand, 39389186 - 39388817
Alignment:
Q  19 aaggagttcaagttaaaagagaagcagtttggaggacaagtcaaggatcctaagttaaagttgaaaaaattcgatttacgaccgacgaagcttgggtcaa 118  Q
    |||||| |||| |||||||| |||||||||| ||| |||||||| |||||| ||| |||| |||| ||||| |||  || |   | | |||  | |||||    
T  39389186 aaggagctcaacttaaaagaaaagcagtttgaagggcaagtcaacgatcctgagtcaaagctgaataaatttgatggacaaataaaggagcccgagtcaa 39389087  T
Q  119 ggaaaaaatatattgaag---aaacacaatcgggtaaatgttcttattcatctagtttattgaaagagtttcaatacaacggttcctcttaatgatgatg 215  Q
    ||||||||||| |||| |   ||| | |||| |||||||||||||||||||| |||||||||||||| |||   |||||| |||||||||||||||||||    
T  39389086 ggaaaaaatattttgatggggaaaaagaatccggtaaatgttcttattcatccagtttattgaaagaatttttttacaactgttcctcttaatgatgatg 39388987  T
Q  216 aca--atttttataacccgatctacatagttgtttaaaaatatttttaatcatgttaatgttttatgtctttgtcatattgaaat-tttgtctagttttc 312  Q
    | |   |||||||| |  ||||||| || ||   || |||  |||||||||||||||||||| |||||| | ||||  |||||||  || || || ||||    
T  39388986 atattttttttatagcttgatctacttaattccatagaaacgtttttaatcatgttaatgttgtatgtcatagtcaatttgaaatgcttttccagatttc 39388887  T
Q  313 atatcacacccacacattgtcaaacaaatttgtatggtatat-ttcacccttgaacattttatgaatctctt 383  Q
    |||||||||||| | | | || ||| |||||| |   |||||  |||||||||||||||||||| |||||||    
T  39388886 atatcacacccaaagactttcgaactaatttgca--atatatcctcacccttgaacattttatgtatctctt 39388817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 143 - 280
Target Start/End: Complemental strand, 39381412 - 39381275
Alignment:
Q  143 aatcgggtaaatgttcttattcatctagtttattgaaagagtttcaatacaacggttcctcttaatgatgatgacaatttttataacccgatctacatag 242  Q
    |||| ||||||||||||||||||| ||||||| ||||||| ||||| | ||   ||| || ||||||||| ||| | ||||  ||||  ||||||||||     
T  39381412 aatctggtaaatgttcttattcatatagtttactgaaagaatttcatttcagttgtttcttttaatgatgttgatacttttattaacttgatctacataa 39381313  T
Q  243 ttgtttaaaaatatttttaatcatgttaatgttttatg 280  Q
    ||  |||||||||||||||||| |||||||||| ||||    
T  39381312 ttcattaaaaatatttttaatcgtgttaatgttgtatg 39381275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 39468333 - 39468379
Alignment:
Q  19 aaggagttcaagttaaaagagaagcagtttggaggacaagtcaagga 65  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||    
T  39468333 aaggagttcaagttaaaagagaagcagattgaaggacaagtcaagga 39468379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 39421733 - 39421688
Alignment:
Q  143 aatcgggtaaatgttcttattcatctagtttattgaaagagtttca 188  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||    
T  39421733 aatctggtaaatgttcttattcatctaatttattgaaagagtttca 39421688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 39370102 - 39370172
Alignment:
Q  19 aaggagttcaagttaaaagagaagcagtttggaggacaagtcaaggatcctaagttaaagttgaaaaaatt 89  Q
    ||||||||| | ||||||||||||||||||||| |||||||||||| || | ||| |||| |||| |||||    
T  39370102 aaggagttcgaattaaaagagaagcagtttggaagacaagtcaagggtcttgagtcaaagatgaataaatt 39370172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 180
Target Start/End: Original strand, 39468448 - 39468485
Alignment:
Q  143 aatcgggtaaatgttcttattcatctagtttattgaaa 180  Q
    |||| |||||||||||||||||||||||||||||||||    
T  39468448 aatctggtaaatgttcttattcatctagtttattgaaa 39468485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 39381553 - 39381510
Alignment:
Q  26 tcaagttaaaagagaagcagtttggaggacaagtcaaggatcct 69  Q
    |||||||||||||||||||||||| | |||||| ||||||||||    
T  39381553 tcaagttaaaagagaagcagtttgaaagacaagacaaggatcct 39381510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 39192489 - 39192439
Alignment:
Q  19 aaggagttcaagttaaaagagaagcagtttggaggacaagtcaaggatcct 69  Q
    |||||| |||| |||||||| |||||||||| ||||| |||||||||||||    
T  39192489 aaggagctcaacttaaaagaaaagcagtttgaaggactagtcaaggatcct 39192439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 39198169 - 39198119
Alignment:
Q  19 aaggagttcaagttaaaagagaagcagtttggaggacaagtcaaggatcct 69  Q
    |||||| |||| |||||||| |||||||||| ||||| |||||||||||||    
T  39198169 aaggagctcaacttaaaagaaaagcagtttgaaggactagtcaaggatcct 39198119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 39459253 - 39459295
Alignment:
Q  26 tcaagttaaaagagaagcagtttggaggacaagtcaaggatcc 68  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||    
T  39459253 tcaagttaaaagacaagcaatttgaaggacaagtcaaggatcc 39459295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 275
Target Start/End: Original strand, 39223101 - 39223154
Alignment:
Q  222 tttataacccgatctacatagttgtttaaaaatatttttaatcatgttaatgtt 275  Q
    |||| |||| ||||||| || || ||||| ||||||||||||||||||||||||    
T  39223101 tttacaacctgatctacttaattctttaagaatatttttaatcatgttaatgtt 39223154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 383
Target Start/End: Original strand, 39468634 - 39468663
Alignment:
Q  354 tttcacccttgaacattttatgaatctctt 383  Q
    ||||||||||||||||||||||||||||||    
T  39468634 tttcacccttgaacattttatgaatctctt 39468663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 383
Target Start/End: Complemental strand, 39478862 - 39478833
Alignment:
Q  354 tttcacccttgaacattttatgaatctctt 383  Q
    ||||||||||||||||||||||||||||||    
T  39478862 tttcacccttgaacattttatgaatctctt 39478833  T

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Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 381
Target Start/End: Complemental strand, 39381194 - 39381166
Alignment:
Q  353 atttcacccttgaacattttatgaatctc 381  Q
    |||||||||||||||||||||||||||||    
T  39381194 atttcacccttgaacattttatgaatctc 39381166  T

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Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 39459387 - 39459431
Alignment:
Q  136 gaaacacaatcgggtaaatgttcttattcatctagtttattgaaa 180  Q
    |||||| |||||||||| ||||||||||||| ||| |||||||||    
T  39459387 gaaacagaatcgggtaagtgttcttattcatttagcttattgaaa 39459431  T

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Target: chr5 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 383
Target Start/End: Original strand, 33561135 - 33561380
Alignment:
Q  143 aatcgggtaaatgttcttattcatctagtttattgaaagagtttcaatacaacggttcctcttaatgatgatgacaattt----ttataacccgatctac 238  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||| | || ||  |||||||| | |||||||||  ||||    ||||| || |||||||    
T  33561135 aatccggtaaatgttcttcttcatctagtttattgaaagaattttattataagtgttcctctcagtgatgatgatgattttttgttatatcctgatctac 33561234  T
Q  239 atagttgtttaaaaatatttttaatcatgttaatgttt-tatgtctttgtcatattgaaa--ttttgtctagttttcatatcacacccacacattgtcaa 335  Q
     || |  |||||| | |||||||||||||||||||||| |||||||| ||||  ||||||   |||  || | |||||||||||||||||| | | |||     
T  33561235 ttaatcctttaaacacatttttaatcatgttaatgtttgtatgtcttggtcaatttgaaaagcttttact-gatttcatatcacacccacagactttcag 33561333  T
Q  336 acaaatttgtatggtatatttcacccttgaacattttatgaatctctt 383  Q
    || ||| || ||  ||| |||||||||||||||||||||| |||||||    
T  33561334 actaatctggattatat-tttcacccttgaacattttatgtatctctt 33561380  T

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Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 17059602 - 17059642
Alignment:
Q  148 ggtaaatgttcttattcatctagtttattgaaagagtttca 188  Q
    |||||||||| |||||||||||||||||| ||||| |||||    
T  17059602 ggtaaatgttgttattcatctagtttattaaaagaatttca 17059642  T

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Target: chr7 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 144 - 240
Target Start/End: Original strand, 19807963 - 19808059
Alignment:
Q  144 atcgggtaaatgttcttattcatctagtttattgaaagagtttcaatacaacggttcctcttaatgatgatgacaatttttataacccgatctacat 240  Q
    |||||||||| ||||||||||||||||||||| ||| |||||||| | || | ||| || || |||||| ||| | |||| |||||| |||||||||    
T  19807963 atcgggtaaaagttcttattcatctagtttatagaaggagtttcatttcagctgtttctttttatgatgttgatatttttaataacctgatctacat 19808059  T

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Target: chr6 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 16113293 - 16113339
Alignment:
Q  19 aaggagttcaagttaaaagagaagcagtttggaggacaagtcaagga 65  Q
    |||||| |||||||||||||||||||| ||| || ||||||||||||    
T  16113293 aaggagctcaagttaaaagagaagcagattgaagtacaagtcaagga 16113339  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 180
Target Start/End: Original strand, 16113441 - 16113478
Alignment:
Q  143 aatcgggtaaatgttcttattcatctagtttattgaaa 180  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  16113441 aatcgggtaagtgttctcattcatctagtttattgaaa 16113478  T

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Target: chr8 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 45342187 - 45342305
Alignment:
Q  159 ttattcatctagtttattgaaagagtttcaatacaacggttcctcttaatgatgatgacaatttttataacccgatctacatagttgtttaaaa---ata 255  Q
    |||||||||||||||||||||||| ||||| | ||||  || || ||  ||||| ||| | |||| |||||| |||||||||| |  |||||||   |||    
T  45342187 ttattcatctagtttattgaaagaatttcatttcaactatttcttttgttgatgttgatatttttaataacctgatctacatattcttttaaaaaatata 45342286  T
Q  256 tttttaatcatgttaatgt 274  Q
    | |||||| ||||||||||    
T  45342287 tgtttaatgatgttaatgt 45342305  T

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