View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15065_low_6 (Length: 253)
Name: NF15065_low_6
Description: NF15065
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15065_low_6 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 13 - 253
Target Start/End: Original strand, 43805223 - 43805463
Alignment:
| Q |
13 |
attatactaatggcaaaaaatggagaaacagtggctgcttttgaacggttctggtaaagactaactgggggcttgaagttgtcaaccaattattaaaatg |
112 |
Q |
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| T |
43805223 |
attatactaatggcaaaaaatggagaaacagtggctgcttttgaacggttctggtaaagactaactgggggcttgaagttgtcaaccaattattaaaatg |
43805322 |
T |
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| Q |
113 |
ttatcaaaacttcttttcatcttatctaccaccactttgcttatgaaaaatcagaagcagcctcattttcatcgaaaacatgtttctttcatcccttccc |
212 |
Q |
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| T |
43805323 |
ttatcaaaacttcttttcatcttatctaccaccactttgcttatgaaaaatcagaagcagcctcattttcatcgaaaacatgtttctttcatcccttccc |
43805422 |
T |
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| Q |
213 |
ctgtttctcattttcacactcatcttcattctctccgccat |
253 |
Q |
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| T |
43805423 |
ctgtttctcattttcacactcatcttcattctctccgccat |
43805463 |
T |
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