View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1506_high_8 (Length: 445)
Name: NF1506_high_8
Description: NF1506
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1506_high_8 |
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Alignment Details
Target: chr6 (Bit Score: 370; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 1 - 425
Target Start/End: Original strand, 30737494 - 30737919
Alignment:
| Q |
1 |
catcattgaagcaaggacacaaaatctattggaagcctccaatacaaaagaagcatcatagatgttttatatacatc-atgttaaattatgccttgaccc |
99 |
Q |
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|||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||| | |
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| T |
30737494 |
catccttgaagcaaggacacgaaatctattggaagcctccaatacaaaagaagtatcatagatgttttatatacatccatgttaacttatgccttgactc |
30737593 |
T |
|
| Q |
100 |
aagcataataagtcatgtctgtgaagatccttcactcagatatcagattcctccacttcagcatagagaaagactctatttaagtgtgtcaaatttgcat |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||| ||||||||||||||||||||||| ||| |
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| T |
30737594 |
aagcataataagtcatgtctgtgaagatccttcactcatatatcagactcgtccacttcagcatagagaaagcctctatttaagtgtgtcaaatttacat |
30737693 |
T |
|
| Q |
200 |
caagaaataccttcttgataaatgcacaaacttgttgagattactacgtactcaatacaaaggaaaaatttccttttcaaaataaaaaaccctacaaaat |
299 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
30737694 |
caagaaataccttcttgataaatgcagaaacttgttgagattactacgtactcaatacaaaggaaaaatttcctcttcaaaataaaaaaccctacaaaat |
30737793 |
T |
|
| Q |
300 |
ttgtaggtactactccttccaatatggaaactctggttacatttcgagcctgatcctctcttgttataataacctggataaaatgatctttgaaaatcca |
399 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30737794 |
ttgtaggtactactccttccaatatggaaactctggttacatttcgagcctgatcctctcttgttataataacctggataaaatgatctttgaaaatcca |
30737893 |
T |
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| Q |
400 |
cttcttcaattaacttcaatcccaca |
425 |
Q |
| |
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|||||||||||||||||||||||||| |
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| T |
30737894 |
cttcttcaattaacttcaatcccaca |
30737919 |
T |
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