View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1506_low_15 (Length: 310)
Name: NF1506_low_15
Description: NF1506
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1506_low_15 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 271; Significance: 1e-151; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 5289802 - 5289504
Alignment:
| Q |
1 |
tacctagactaggaaaggaggcagccgtaaaagctataaaagaatggggtcagccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgt |
100 |
Q |
| |
|
|||||||||||||||||||||| || || || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5289802 |
tacctagactaggaaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgt |
5289703 |
T |
|
| Q |
101 |
agacatgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
5289702 |
agacatgcctggagccgattatcaactcacaaaactcttgggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaagggtgttttgcaggtggc |
5289603 |
T |
|
| Q |
201 |
acggtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcacattccgtggcccc |
299 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5289602 |
acggtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcacattccgtggcccc |
5289504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 5310414 - 5310712
Alignment:
| Q |
1 |
tacctagactaggaaaggaggcagccgtaaaagctataaaagaatggggtcagccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgt |
100 |
Q |
| |
|
|||||||||||||||||||||| || || || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5310414 |
tacctagactaggaaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgt |
5310513 |
T |
|
| Q |
101 |
agacatgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggc |
200 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
5310514 |
agacatgcctggagctgattatcaactcacaaaactcttgggccttcgtccatatgtgaaaaggtatatgatgtaccaacaagggtgttttgcaggtggc |
5310613 |
T |
|
| Q |
201 |
acggtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcacattccgtggcccc |
299 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
5310614 |
acggtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcacatttcgtggcccc |
5310712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 5284325 - 5284622
Alignment:
| Q |
1 |
tacctagactaggaaaggaggcagccgtaaaagctataaaagaatggggtcagccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgt |
100 |
Q |
| |
|
|||||||||||||||||||||| || || || ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5284325 |
tacctagactaggaaaggaggctgcagtgaaggctataaaagaatggggccaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgt |
5284424 |
T |
|
| Q |
101 |
agacatgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5284425 |
agacatgcctggagccgattatcaactcaccaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggt |
5284524 |
T |
|
| Q |
201 |
acggtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcacattccgtggccc |
298 |
Q |
| |
|
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
5284525 |
acggtacttcgtttggccaaagatttagctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcacatttcgtggccc |
5284622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 5302513 - 5302810
Alignment:
| Q |
1 |
tacctagactaggaaaggaggcagccgtaaaagctataaaagaatggggtcagccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgt |
100 |
Q |
| |
|
|||||||||||||||||||||| || || || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5302513 |
tacctagactaggaaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgt |
5302612 |
T |
|
| Q |
101 |
agacatgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggc |
200 |
Q |
| |
|
||||||||| | ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5302613 |
agacatgcccgaagctgattatcaactcaccaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggc |
5302712 |
T |
|
| Q |
201 |
acggtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcacattccgtggccc |
298 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||| |||||||| |
|
|
| T |
5302713 |
acggtgcttcgtttggccaaagatctagctgagaacaacaaaggtgctcgtgtgttggttgtatgttcagaggtcaccgctgtcacatttcgtggccc |
5302810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 5315128 - 5315422
Alignment:
| Q |
1 |
tacctagactaggaaaggaggcagccgtaaaagctataaaagaatggggtcagccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgt |
100 |
Q |
| |
|
||||||||||||| |||||||| || || || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5315128 |
tacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgt |
5315227 |
T |
|
| Q |
101 |
agacatgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggc |
200 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||||| || ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
5315228 |
tgacatgcctggagcagattatcaactcaccaaactattaggtcttcgcccatatgtgaaaagatacatgatgtaccaacaagggtgctttgcaggtggc |
5315327 |
T |
|
| Q |
201 |
acggtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcacattccgtgg |
295 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
5315328 |
acggtgctccgtttggctaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcacatttcgtgg |
5315422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 46707093 - 46706796
Alignment:
| Q |
1 |
tacctagactaggaaaggaggcagccgtaaaagctataaaagaatggggtcagccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgt |
100 |
Q |
| |
|
||||||||||||| |||||||| || || || |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || |||||||| |
|
|
| T |
46707093 |
tacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattacccacttaatcgtttgcactactagtggtgt |
46706994 |
T |
|
| Q |
101 |
agacatgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggc |
200 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| || |||||||| ||| |
|
|
| T |
46706993 |
agacatgcctggagctgattaccaactcacaaaactcttcggtcttcgcccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgcaggaggc |
46706894 |
T |
|
| Q |
201 |
acggtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcacattccgtggccc |
298 |
Q |
| |
|
|||| |||||||||||| || |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||| ||||| |
|
|
| T |
46706893 |
acggggcttcgtttggctaacgatttggctgagaacaacaaaggtgcccgtgtattggttgtttgttctgaagtcactgcagtcacattccgcggccc |
46706796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 295
Target Start/End: Complemental strand, 32531019 - 32530819
Alignment:
| Q |
95 |
tggtgtagacatgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgca |
194 |
Q |
| |
|
||||||||||||||| || |||||||| |||||||| |||||||| || || |||| ||| ||| | ||||||||| |||||||| ||||| ||| |
|
|
| T |
32531019 |
tggtgtagacatgccgggtgccgattaccaactcactaaactcttaggcctaaaaccatctgtcaaacgtctcatgatgtatcaacaaggttgtttcgca |
32530920 |
T |
|
| Q |
195 |
ggtggcacggtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcacattccgtg |
294 |
Q |
| |
|
|| ||||| || || || || || |||||| | |||||||| |||||| ||| | || | ||||||||||||||| |||| || || || ||||||| |
|
|
| T |
32530919 |
ggcggcacagttctccgcttagcgaaagatcttgctgagaataacaaaaatgcaagagttcttgttgtttgttctgaaatcactgcagttactttccgtg |
32530820 |
T |
|
| Q |
295 |
g |
295 |
Q |
| |
|
| |
|
|
| T |
32530819 |
g |
32530819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 222; Significance: 1e-122; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 1504994 - 1505291
Alignment:
| Q |
1 |
tacctagactaggaaaggaggcagccgtaaaagctataaaagaatggggtcagccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgt |
100 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
1504994 |
tacctagactaggaaaggaggctgccgtaaaagctataaaagaatggggtcagccaaagtcaaagattactcacttaattgtttgcaccacaagtggtgt |
1505093 |
T |
|
| Q |
101 |
agacatgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggc |
200 |
Q |
| |
|
||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
1505094 |
agacatgcctggagctgattaccaactcaccaaactcttaggtcttcgcccatatgtgaagaggtacatgatgtaccagcaaggatgttttgcaggtggg |
1505193 |
T |
|
| Q |
201 |
acggtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcacattccgtggccc |
298 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||| |||||||| || |||||||| || ||||| |
|
|
| T |
1505194 |
acggtgcttcgtttggccaaggacttggctgagaacaacaaaggtgcccgtgtgttggttgtctgttccgaagtcactgcagtcacatttcgcggccc |
1505291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 1492185 - 1492479
Alignment:
| Q |
1 |
tacctagactaggaaaggaggcagccgtaaaagctataaaagaatggggtcagccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgt |
100 |
Q |
| |
|
||||||||||||| |||||||| || || || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
1492185 |
tacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagcggtgt |
1492284 |
T |
|
| Q |
101 |
agacatgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggc |
200 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |||||||| |||||||| |||||||| ||||| |||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
1492285 |
agacatgcctggggccgattatcaactcactaaactcttaggtcttcgtccatatgtaaaaagatacatgatgtaccagcaaggttgttttgcaggtggc |
1492384 |
T |
|
| Q |
201 |
acggtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcacattccgtgg |
295 |
Q |
| |
|
||||| ||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||| ||||| |
|
|
| T |
1492385 |
acggtacttcgtttggctaaggatttggctgagaacaacaaaggtgctcgtgtgttagttgtttgttctgaagtcactgcagtcacatttcgtgg |
1492479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 1478016 - 1478310
Alignment:
| Q |
1 |
tacctagactaggaaaggaggcagccgtaaaagctataaaagaatggggtcagccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgt |
100 |
Q |
| |
|
|||||||||||||||||||||| || || |||||||||||||||||||| || ||||| ||||||||||| ||||| ||| ||||||||||||||||||| |
|
|
| T |
1478016 |
tacctagactaggaaaggaggctgcagtgaaagctataaaagaatggggccaaccaaaatcaaagattacacacttgatcttttgcaccacaagtggtgt |
1478115 |
T |
|
| Q |
101 |
agacatgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggc |
200 |
Q |
| |
|
|||||||||||| || ||||| |||||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
1478116 |
agacatgcctggcgctgattaccaactcaccaaactcttaggtcttcgtccatatgtgaagaggtatatgatgtaccaacaaggatgttttgcaggtggg |
1478215 |
T |
|
| Q |
201 |
acggtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcacattccgtgg |
295 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||| || || || ||||||||||| |
|
|
| T |
1478216 |
acggtgcttcgtttggccaaggacttggctgagaacaataaaggtgctcgtgtgttggttgtttgttctgaagttactgcagtgacattccgtgg |
1478310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 3 - 295
Target Start/End: Original strand, 1482212 - 1482504
Alignment:
| Q |
3 |
cctagactaggaaaggaggcagccgtaaaagctataaaagaatggggtcagccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtag |
102 |
Q |
| |
|
|||||||||||||||||||| || || || ||||||||||||||||| || ||||| ||||||||||| |||||||| |||| |||||||||||||||| |
|
|
| T |
1482212 |
cctagactaggaaaggaggctgcagtgaaggctataaaagaatggggccaaccaaaatcaaagattacacacttaatattttgtaccacaagtggtgtag |
1482311 |
T |
|
| Q |
103 |
acatgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggcac |
202 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||| |||||||| ||||||||||| || |||||||||||||||||||| || ||||||||||| || |
|
|
| T |
1482312 |
acatgcctggtgccgattaccaactcacaaaactcttaggtcttcgtccatatgtgaagagatacatgatgtaccaacaaggatgctttgcaggtgggac |
1482411 |
T |
|
| Q |
203 |
ggtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcacattccgtgg |
295 |
Q |
| |
|
|||||||||||||||||| || ||||||||||| || ||||||||||||||||||||||||||||||||||| || || || ||||||||||| |
|
|
| T |
1482412 |
ggtgcttcgtttggccaaggacttggctgagaataataaaggtgctcgtgtgttggttgtttgttctgaagttactgcagtgacattccgtgg |
1482504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 1509141 - 1509438
Alignment:
| Q |
1 |
tacctagactaggaaaggaggcagccgtaaaagctataaaagaatggggtcagccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgt |
100 |
Q |
| |
|
||||||| |||||||| |||| || || || ||||||||||||||||| |||||||| ||||||||||| || |||||| ||||||||||||||||||| |
|
|
| T |
1509141 |
tacctaggctaggaaaagaggttgcagtgaaggctataaaagaatggggccagccaaaatcaaagattacacatttaatcttttgcaccacaagtggtgt |
1509240 |
T |
|
| Q |
101 |
agacatgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggc |
200 |
Q |
| |
|
|| ||| ||||||| |||||||||| || ||||| || ||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
1509241 |
tgatatgtctggagctcattatcaacttaccaaacttttaggtcttcacccatatgtaaaaaggtacatgatgtaccaacaaaggtgttttgcaggtggc |
1509340 |
T |
|
| Q |
201 |
acggtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcacattccgtggccc |
298 |
Q |
| |
|
|| ||||||| |||||| || ||||||||||| || ||| ||| ||||||||||||||||||||||||| |||||| || |||||||| ||||||| |
|
|
| T |
1509341 |
actgtgcttcatttggcaaaggatttggctgaaaataaccaagatgctcgtgtgttggttgtttgttctaaagtcattgcagtcacattttgtggccc |
1509438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 1499257 - 1499533
Alignment:
| Q |
1 |
tacctagactaggaaaggaggcagccgtaaaagctataaaagaatggggtcagccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgt |
100 |
Q |
| |
|
||||||||||||| |||||||| || || || ||||| ||||||||||||| || |||||||| ||||| || ||||| |||||||| |||||||| |
|
|
| T |
1499257 |
tacctagactagggaaggaggctgcagtgaaggctatcgaagaatggggtcaaccgaagtcaaatattacacatttaattttttgcacctatagtggtgt |
1499356 |
T |
|
| Q |
101 |
agacatgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggc |
200 |
Q |
| |
|
|||||||||||| || ||||| ||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| |
|
|
| T |
1499357 |
agacatgcctggtgcggattaccaactaacaaaactcttaggtcttaacccatatgtgaaaaggtacatgatgtaccaactagggtgttatgcaggtgga |
1499456 |
T |
|
| Q |
201 |
acggtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcac |
277 |
Q |
| |
|
|| || ||||||||||| || || || |||||||| |||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
1499457 |
acagtacttcgtttggcgaaggacttagctgagaataacaaaggtgctcgtgtgttggttgtttgttctgaaatcac |
1499533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 3 - 277
Target Start/End: Original strand, 1486689 - 1486963
Alignment:
| Q |
3 |
cctagactaggaaaggaggcagccgtaaaagctataaaagaatggggtcagccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtag |
102 |
Q |
| |
|
||||| |||||||| ||||| || || |||||||||||||||| ||| || ||||||||||||||||| |||||||| ||||||||| |||||| ||| |
|
|
| T |
1486689 |
cctaggctaggaaatgaggctgcagtgaaagctataaaagaatagggccaaccaaagtcaaagattacacacttaatattttgcaccatgagtggtatag |
1486788 |
T |
|
| Q |
103 |
acatgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggcac |
202 |
Q |
| |
|
||||||||| |||||||| ||||||||||||||||| |||||| |||| |||||||| |||| ||||| ||||||||||| || |||||||| ||||| |
|
|
| T |
1486789 |
gcatgcctggtgccgattaccaactcacaaaactcttaggtctttgcccggatgtgaaacggtatatgatataccaacaaggatgctttgcagggggcac |
1486888 |
T |
|
| Q |
203 |
ggtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcac |
277 |
Q |
| |
|
|| || |||| |||||| || |||||||||||||| |||| ||||| ||||||||| | |||||||||||||| |
|
|
| T |
1486889 |
tgttctacgttaggccaaggacttggctgagaacaataaagatgctcttgtgttggtaatatgttctgaagtcac |
1486963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 202; Significance: 1e-110; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 44128591 - 44128888
Alignment:
| Q |
1 |
tacctagactaggaaaggaggcagccgtaaaagctataaaagaatggggtcagccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgt |
100 |
Q |
| |
|
||||||||||||| |||||||| || || || || ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
44128591 |
tacctagactagggaaggaggctgcagtgaaggccataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttgcaccacaagtggtgt |
44128690 |
T |
|
| Q |
101 |
agacatgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggc |
200 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| || |||||||| ||| |
|
|
| T |
44128691 |
agacatgcctggagctgattaccaactcacaaaactcttaggtcttcgcccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgcaggaggc |
44128790 |
T |
|
| Q |
201 |
acggtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcacattccgtggccc |
298 |
Q |
| |
|
||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| || |||||||| || ||||| |
|
|
| T |
44128791 |
acggtccttcgtttggctaaagatttagctgaaaacaacaaaggtgctcgtgtgttggttgtctgttctgaagtcactgcagtcacatttcgcggccc |
44128888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 44132796 - 44133093
Alignment:
| Q |
1 |
tacctagactaggaaaggaggcagccgtaaaagctataaaagaatggggtcagccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgt |
100 |
Q |
| |
|
||||||||||||| |||||||| || || || || ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
44132796 |
tacctagactagggaaggaggctgcagtgaaggccataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttgcaccacaagtggtgt |
44132895 |
T |
|
| Q |
101 |
agacatgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggc |
200 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| || |||||||| ||| |
|
|
| T |
44132896 |
agacatgcctggagctgattaccaactcacaaaactcttaggtcttcgcccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgcaggaggc |
44132995 |
T |
|
| Q |
201 |
acggtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcacattccgtggccc |
298 |
Q |
| |
|
||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| || |||||||| || ||||| |
|
|
| T |
44132996 |
acggtccttcgtttggctaaagatttagctgaaaacaacaaaggtgctcgtgtgttggttgtctgttctgaagtcactgcagtcacatttcgcggccc |
44133093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 44141218 - 44141515
Alignment:
| Q |
1 |
tacctagactaggaaaggaggcagccgtaaaagctataaaagaatggggtcagccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgt |
100 |
Q |
| |
|
||||||||||||| |||||||| || || || || ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
44141218 |
tacctagactagggaaggaggctgcagtgaaggccataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttgcaccacaagtggtgt |
44141317 |
T |
|
| Q |
101 |
agacatgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggc |
200 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| || |||||||| ||| |
|
|
| T |
44141318 |
agacatgcctggagctgattaccaactcacaaaactcttaggtcttcgcccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgcaggaggc |
44141417 |
T |
|
| Q |
201 |
acggtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcacattccgtggccc |
298 |
Q |
| |
|
||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| || |||||||| || ||||| |
|
|
| T |
44141418 |
acggtccttcgtttggctaaagatttagctgaaaacaacaaaggtgctcgtgtgttggttgtctgttctgaagtcactgcagtcacatttcgcggccc |
44141515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 6 - 289
Target Start/End: Complemental strand, 24163890 - 24163607
Alignment:
| Q |
6 |
agactaggaaaggaggcagccgtaaaagctataaaagaatggggtcagccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtagaca |
105 |
Q |
| |
|
||||||||||||||||||||||| || ||||||||||||||||| || |||||||||||||| || |||||||| ||||||| | |||||||||||| | |
|
|
| T |
24163890 |
agactaggaaaggaggcagccgtgaaggctataaaagaatggggccaaccaaagtcaaagatcacacacttaatattttgcactataagtggtgtagata |
24163791 |
T |
|
| Q |
106 |
tgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggcacggt |
205 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||| ||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24163790 |
tgcctggtgccgattaccaactcacaaaactcttaggtcttcgcccatgtgtaaaaaggtatatgatgtaccaacaagggtgttttgcaggtggcacggt |
24163691 |
T |
|
| Q |
206 |
gcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcacatt |
289 |
Q |
| |
|
||||| |||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
24163690 |
acttcgcttggccaaggacttggctgagaacaacaaaggttctcgtgtgttggttgtttgttctgaagttaccgcaatcacatt |
24163607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 124; Significance: 9e-64; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 37859469 - 37859202
Alignment:
| Q |
1 |
tacctagactaggaaaggaggcagccgtaaaagctataaaagaatggggtcagccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgt |
100 |
Q |
| |
|
|||| ||||||||||| |||||||| ||| || || || ||||||||||| || ||||| |||||||| ||| | ||| |||||||||| ||||| || |
|
|
| T |
37859469 |
taccaagactaggaaaagaggcagcaacaaaggccatcaaggaatggggtcaacctaagtccaagattacccacctcatcttttgcaccaccagtggcgt |
37859370 |
T |
|
| Q |
101 |
agacatgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggc |
200 |
Q |
| |
|
|||||||| || ||||| ||||| || ||||| |||||||| ||||| ||||||||||| | |||||||||||||||||||| |||||||| |||||| |
|
|
| T |
37859369 |
ggacatgcccggtgccgactatcagctgacaaagctcttgggccttcgtccatatgtgaagcgttacatgatgtaccaacaaggttgttttgctggtggc |
37859270 |
T |
|
| Q |
201 |
acggtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttc |
268 |
Q |
| |
|
||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||| |
|
|
| T |
37859269 |
acggtgcttcgtttggctaaagacttggctgaaaacaacaaaggtgctcgtgtgttggtagtttgttc |
37859202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 33 - 268
Target Start/End: Complemental strand, 37863463 - 37863228
Alignment:
| Q |
33 |
gctataaaagaatggggtcagccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtagacatgcctggagccgattatcaactcacaa |
132 |
Q |
| |
|
||||| || ||||||||||| || ||||||||||||||||| |||| ||||||||||||||||||| || |||||||| || || ||||| ||||||| |
|
|
| T |
37863463 |
gctatcaaggaatggggtcaacctaagtcaaagattactcatctaattttttgcaccacaagtggtgtggatatgcctggtgctgactatcagctcacaa |
37863364 |
T |
|
| Q |
133 |
aactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggcacggtgcttcgtttggccaaagatttggctga |
232 |
Q |
| |
|
| ||||||||||||||||| |||||||| | || |||||||| |||||||| |||||||| ||||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
37863363 |
agctcttgggtcttcgcccgtatgtgaagcgttatatgatgtatcaacaaggttgttttgctggtgggacggtgcttcgtttggctaaagatttggctga |
37863264 |
T |
|
| Q |
233 |
gaacaacaaaggtgctcgtgtgttggttgtttgttc |
268 |
Q |
| |
|
||||||||||| |||||||| ||||| |||||||| |
|
|
| T |
37863263 |
aaacaacaaaggcgctcgtgttttggtggtttgttc |
37863228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 28 - 257
Target Start/End: Original strand, 39030115 - 39030344
Alignment:
| Q |
28 |
taaaagctataaaagaatggggtcagccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtagacatgcctggagccgattatcaact |
127 |
Q |
| |
|
|||| ||||| || ||||||||||| || ||||||| | ||||||| | || ||||||| |||||||||| || ||||||||||| || ||||| || |
|
|
| T |
39030115 |
taaaggctatcaatgaatggggtcaacctaagtcaatggttactcatctcatattttgcacttcaagtggtgtcgatatgcctggagctgactatcagct |
39030214 |
T |
|
| Q |
128 |
cacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggcacggtgcttcgtttggccaaagatttg |
227 |
Q |
| |
|
|||||| ||||| || ||| | |||||||| || | || ||||||||||||||||| |||||||| |||| | || ||||| ||||| ||||||||| |
|
|
| T |
39030215 |
cacaaagctcttaggcctttgtccatatgtaaagcgttatatgatgtaccaacaaggttgttttgctggtgcgatggctcttcgcttggctaaagatttg |
39030314 |
T |
|
| Q |
228 |
gctgagaacaacaaaggtgctcgtgtgttg |
257 |
Q |
| |
|
|||||||||||||||||||| ||||||||| |
|
|
| T |
39030315 |
gctgagaacaacaaaggtgcccgtgtgttg |
39030344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 29 - 253
Target Start/End: Original strand, 35250856 - 35251080
Alignment:
| Q |
29 |
aaaagctataaaagaatggggtcagccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtagacatgcctggagccgattatcaactc |
128 |
Q |
| |
|
|||||| || || ||||||||||| |||||||| ||||| |||||| | || |||||| || |||||||| || |||||||| || |||||||| ||| |
|
|
| T |
35250856 |
aaaagcgatcaaggaatggggtcaaccaaagtccaagatcactcacctcatattttgcattactagtggtgtggatatgcctggtgctgattatcagctc |
35250955 |
T |
|
| Q |
129 |
acaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggcacggtgcttcgtttggccaaagatttgg |
228 |
Q |
| |
|
|||||| | | || ||||| || | |||||| | || ||||||||||||||||||||||| || ||||| | ||| ||||||||||| |||||||||| |
|
|
| T |
35250956 |
acaaaattgctaggacttcgtccgtcggtgaaacgttatatgatgtaccaacaagggtgtttcgctggtggtatggttcttcgtttggctaaagatttgg |
35251055 |
T |
|
| Q |
229 |
ctgagaacaacaaaggtgctcgtgt |
253 |
Q |
| |
|
|||||||||| |||||||||||||| |
|
|
| T |
35251056 |
ctgagaacaataaaggtgctcgtgt |
35251080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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