View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1507-Insertion-10 (Length: 716)

Name: NF1507-Insertion-10
Description: NF1507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1507-Insertion-10
NF1507-Insertion-10
[»] chr5 (41 HSPs)
chr5 (295-716)||(36732948-36733348)
chr5 (8-221)||(36730734-36730947)
chr5 (295-391)||(18520890-18520986)
chr5 (295-389)||(42414308-42414402)
chr5 (295-390)||(2740273-2740368)
chr5 (295-389)||(40145407-40145501)
chr5 (295-391)||(13811650-13811746)
chr5 (295-389)||(14831814-14831908)
chr5 (295-389)||(33149644-33149738)
chr5 (295-389)||(35785199-35785293)
chr5 (295-389)||(28177775-28177869)
chr5 (295-389)||(35943898-35943992)
chr5 (299-391)||(3921275-3921367)
chr5 (295-391)||(15409616-15409712)
chr5 (295-390)||(6679697-6679792)
chr5 (330-388)||(36875644-36875702)
chr5 (299-390)||(2252178-2252269)
chr5 (295-391)||(31008986-31009082)
chr5 (295-389)||(26720516-26720610)
chr5 (295-389)||(26990265-26990359)
chr5 (205-265)||(2740398-2740458)
chr5 (205-265)||(18520800-18520860)
chr5 (298-390)||(41470425-41470517)
chr5 (203-265)||(40145531-40145593)
chr5 (204-265)||(33149553-33149614)
chr5 (326-391)||(39688934-39688999)
chr5 (326-384)||(10356639-10356698)
chr5 (322-389)||(33825357-33825424)
chr5 (207-265)||(31132458-31132516)
chr5 (295-388)||(16327902-16327995)
chr5 (204-252)||(16115247-16115295)
chr5 (217-265)||(36732870-36732918)
chr5 (323-389)||(6260035-6260101)
chr5 (207-265)||(14831938-14831996)
chr5 (306-391)||(9603811-9603896)
chr5 (295-389)||(20073522-20073616)
chr5 (207-265)||(35785323-35785381)
chr5 (297-341)||(31132392-31132436)
chr5 (219-265)||(13811776-13811822)
chr5 (219-261)||(31009116-31009158)
chr5 (322-391)||(38296201-38296270)
[»] chr2 (55 HSPs)
chr2 (295-391)||(9058478-9058574)
chr2 (295-391)||(33436106-33436202)
chr2 (295-386)||(28863458-28863549)
chr2 (295-391)||(10249388-10249484)
chr2 (295-390)||(7465741-7465836)
chr2 (295-386)||(19930826-19930917)
chr2 (295-390)||(32505654-32505749)
chr2 (295-389)||(13438343-13438437)
chr2 (295-389)||(17473020-17473114)
chr2 (295-393)||(30915459-30915557)
chr2 (295-390)||(5574494-5574589)
chr2 (295-389)||(40701478-40701572)
chr2 (295-389)||(27864704-27864798)
chr2 (295-389)||(28381661-28381755)
chr2 (295-391)||(20700813-20700909)
chr2 (295-389)||(40613908-40614002)
chr2 (306-391)||(38882831-38882915)
chr2 (295-389)||(4060685-4060779)
chr2 (295-391)||(26891510-26891606)
chr2 (295-391)||(38273148-38273244)
chr2 (299-389)||(43490121-43490211)
chr2 (322-390)||(33436210-33436278)
chr2 (295-391)||(42257191-42257287)
chr2 (295-390)||(2533123-2533217)
chr2 (299-389)||(38732354-38732444)
chr2 (204-265)||(7465650-7465711)
chr2 (299-371)||(2997497-2997569)
chr2 (299-391)||(45097745-45097837)
chr2 (202-265)||(19930733-19930796)
chr2 (207-265)||(10249300-10249358)
chr2 (207-265)||(17473144-17473202)
chr2 (295-389)||(17820010-17820104)
chr2 (207-265)||(28863579-28863637)
chr2 (306-388)||(41575138-41575220)
chr2 (295-383)||(3439985-3440073)
chr2 (206-265)||(27864815-27864874)
chr2 (322-391)||(17823782-17823851)
chr2 (207-264)||(32505566-32505623)
chr2 (297-390)||(36168835-36168928)
chr2 (209-265)||(33436020-33436076)
chr2 (295-346)||(3737986-3738037)
chr2 (299-391)||(13365349-13365443)
chr2 (207-265)||(5574418-5574476)
chr2 (207-265)||(13438467-13438525)
chr2 (324-391)||(15428775-15428842)
chr2 (207-265)||(9058604-9058662)
chr2 (206-252)||(28381572-28381618)
chr2 (207-265)||(38882729-38882787)
chr2 (206-265)||(40701602-40701661)
chr2 (219-261)||(20700943-20700985)
chr2 (223-265)||(44152051-44152093)
chr2 (211-252)||(2533260-2533301)
chr2 (322-363)||(16096874-16096914)
chr2 (219-252)||(40613832-40613865)
chr2 (322-363)||(42849793-42849833)
[»] chr1 (51 HSPs)
chr1 (295-391)||(2581913-2582009)
chr1 (295-389)||(9474882-9474976)
chr1 (295-389)||(3000319-3000413)
chr1 (295-393)||(38632327-38632425)
chr1 (295-389)||(48716288-48716382)
chr1 (295-391)||(38595152-38595248)
chr1 (295-390)||(51898689-51898784)
chr1 (295-389)||(27564741-27564835)
chr1 (295-389)||(47452326-47452420)
chr1 (295-391)||(8346394-8346490)
chr1 (295-390)||(50630457-50630552)
chr1 (295-391)||(32813245-32813341)
chr1 (295-386)||(44548382-44548473)
chr1 (296-388)||(11152385-11152476)
chr1 (295-390)||(41758804-41758899)
chr1 (295-389)||(43132-43226)
chr1 (295-389)||(37649198-37649292)
chr1 (299-389)||(50591010-50591100)
chr1 (299-391)||(5959010-5959102)
chr1 (295-391)||(49811533-49811629)
chr1 (322-391)||(23597124-23597193)
chr1 (205-265)||(9474792-9474852)
chr1 (295-359)||(13414791-13414855)
chr1 (299-391)||(26274430-26274522)
chr1 (206-265)||(26274553-26274612)
chr1 (299-389)||(41608503-41608593)
chr1 (207-265)||(41758929-41758987)
chr1 (295-391)||(45044566-45044662)
chr1 (206-265)||(27564652-27564711)
chr1 (295-389)||(3302539-3302633)
chr1 (207-265)||(48716200-48716258)
chr1 (208-265)||(37649322-37649379)
chr1 (322-382)||(26440741-26440801)
chr1 (206-265)||(2582039-2582098)
chr1 (299-389)||(47748443-47748532)
chr1 (295-384)||(44453984-44454073)
chr1 (322-390)||(37926471-37926539)
chr1 (206-265)||(43256-43315)
chr1 (295-389)||(6260870-6260964)
chr1 (221-265)||(38632253-38632297)
chr1 (295-362)||(48489328-48489394)
chr1 (300-390)||(7740732-7740822)
chr1 (322-384)||(34340072-34340133)
chr1 (207-261)||(47452238-47452292)
chr1 (219-249)||(49811457-49811487)
chr1 (219-265)||(50630582-50630628)
chr1 (322-363)||(750239-750279)
chr1 (322-363)||(4401454-4401494)
chr1 (322-363)||(7447951-7447991)
chr1 (295-364)||(44334176-44334245)
chr1 (322-363)||(50448194-50448234)
[»] chr3 (56 HSPs)
chr3 (295-393)||(27714897-27714995)
chr3 (295-389)||(53982011-53982105)
chr3 (295-389)||(33644200-33644294)
chr3 (295-388)||(31456690-31456783)
chr3 (295-391)||(49607412-49607508)
chr3 (295-384)||(52629305-52629394)
chr3 (295-391)||(54868901-54868997)
chr3 (295-389)||(8076393-8076487)
chr3 (316-391)||(11095380-11095455)
chr3 (295-390)||(17470404-17470499)
chr3 (295-389)||(26141538-26141632)
chr3 (299-385)||(48587101-48587187)
chr3 (310-391)||(33118872-33118953)
chr3 (304-391)||(36707439-36707526)
chr3 (295-389)||(14623845-14623939)
chr3 (295-385)||(30801739-30801829)
chr3 (295-384)||(26754700-26754789)
chr3 (295-390)||(35536625-35536720)
chr3 (295-388)||(13898061-13898154)
chr3 (295-391)||(11907369-11907465)
chr3 (295-390)||(8956761-8956856)
chr3 (322-391)||(11347955-11348024)
chr3 (322-390)||(24699987-24700055)
chr3 (295-391)||(41189770-41189866)
chr3 (295-389)||(20764921-20765015)
chr3 (299-389)||(45058563-45058652)
chr3 (295-389)||(47531865-47531959)
chr3 (295-389)||(51419366-51419460)
chr3 (204-265)||(48587016-48587077)
chr3 (205-265)||(11095283-11095343)
chr3 (295-390)||(9562998-9563093)
chr3 (307-389)||(41080709-41080790)
chr3 (207-265)||(49607538-49607596)
chr3 (204-265)||(33644324-33644385)
chr3 (322-391)||(35965807-35965876)
chr3 (204-265)||(52629424-52629485)
chr3 (299-367)||(36331339-36331407)
chr3 (327-390)||(36331416-36331479)
chr3 (207-265)||(53982135-53982193)
chr3 (303-384)||(42823116-42823197)
chr3 (209-265)||(9563123-9563179)
chr3 (206-265)||(17470529-17470588)
chr3 (322-390)||(21746214-21746284)
chr3 (295-390)||(48375712-48375807)
chr3 (324-391)||(1758491-1758560)
chr3 (207-265)||(31456813-31456871)
chr3 (295-393)||(35093581-35093679)
chr3 (322-386)||(25407180-25407245)
chr3 (219-264)||(35965712-35965757)
chr3 (208-265)||(36707347-36707404)
chr3 (204-265)||(54868810-54868871)
chr3 (219-265)||(20764845-20764891)
chr3 (219-252)||(30801663-30801696)
chr3 (220-261)||(35093713-35093754)
chr3 (322-363)||(52629954-52629994)
chr3 (322-363)||(53581792-53581832)
[»] chr7 (54 HSPs)
chr7 (295-391)||(7389387-7389483)
chr7 (295-391)||(8080389-8080485)
chr7 (295-399)||(38837207-38837311)
chr7 (295-390)||(36361919-36362014)
chr7 (295-389)||(38267040-38267134)
chr7 (295-390)||(3434561-3434656)
chr7 (295-390)||(36362025-36362120)
chr7 (295-389)||(19329842-19329936)
chr7 (295-389)||(35137533-35137627)
chr7 (295-386)||(3783998-3784089)
chr7 (295-389)||(4999520-4999614)
chr7 (295-391)||(19436193-19436289)
chr7 (295-391)||(40957705-40957801)
chr7 (295-386)||(3694370-3694461)
chr7 (299-389)||(8238212-8238303)
chr7 (299-392)||(38044194-38044287)
chr7 (295-389)||(46374808-46374902)
chr7 (295-388)||(32951499-32951592)
chr7 (299-390)||(22343360-22343451)
chr7 (299-390)||(41915740-41915831)
chr7 (295-389)||(21234401-21234495)
chr7 (295-384)||(35522881-35522970)
chr7 (323-391)||(10343597-10343665)
chr7 (295-391)||(36208171-36208267)
chr7 (300-389)||(40846124-40846213)
chr7 (205-265)||(36362138-36362198)
chr7 (340-391)||(11044186-11044237)
chr7 (203-265)||(38837341-38837403)
chr7 (322-391)||(18207178-18207247)
chr7 (204-265)||(19329966-19330027)
chr7 (324-389)||(32564461-32564526)
chr7 (297-390)||(46033809-46033902)
chr7 (299-391)||(7727904-7727996)
chr7 (298-390)||(26296643-26296735)
chr7 (206-265)||(4999431-4999490)
chr7 (328-391)||(35468894-35468957)
chr7 (206-253)||(36361842-36361889)
chr7 (322-389)||(39255956-39256023)
chr7 (333-389)||(31735884-31735940)
chr7 (205-265)||(40957831-40957891)
chr7 (206-261)||(8080300-8080355)
chr7 (206-265)||(11044302-11044361)
chr7 (206-265)||(32951410-32951469)
chr7 (207-265)||(3434676-3434734)
chr7 (206-265)||(35137657-35137716)
chr7 (219-265)||(19436117-19436163)
chr7 (322-391)||(45223040-45223109)
chr7 (325-384)||(2318279-2318338)
chr7 (219-253)||(39255854-39255888)
chr7 (219-265)||(46033731-46033777)
chr7 (205-246)||(7389531-7389572)
chr7 (219-252)||(16374754-16374787)
chr7 (322-363)||(32029751-32029791)
chr7 (324-389)||(41423682-41423747)
[»] chr4 (47 HSPs)
chr4 (295-391)||(48183055-48183151)
chr4 (295-391)||(50052434-50052530)
chr4 (295-389)||(11511468-11511562)
chr4 (295-391)||(480453-480549)
chr4 (295-389)||(6034044-6034138)
chr4 (295-389)||(41236347-41236441)
chr4 (295-391)||(42044373-42044469)
chr4 (295-389)||(54473539-54473633)
chr4 (295-391)||(29239884-29239980)
chr4 (295-390)||(29234251-29234346)
chr4 (295-389)||(3481654-3481748)
chr4 (295-392)||(24995113-24995210)
chr4 (296-389)||(50526178-50526271)
chr4 (295-391)||(23608233-23608329)
chr4 (295-391)||(29977883-29977979)
chr4 (295-389)||(31910192-31910286)
chr4 (299-400)||(19670726-19670827)
chr4 (321-389)||(40574779-40574847)
chr4 (324-391)||(55475189-55475256)
chr4 (299-390)||(47986207-47986298)
chr4 (299-390)||(50813902-50813993)
chr4 (297-384)||(53352574-53352660)
chr4 (299-392)||(32766955-32767048)
chr4 (299-371)||(17983753-17983825)
chr4 (324-391)||(29547994-29548061)
chr4 (204-265)||(42044282-42044343)
chr4 (207-264)||(48182967-48183024)
chr4 (324-389)||(55079749-55079814)
chr4 (295-390)||(28480274-28480369)
chr4 (295-390)||(28481149-28481244)
chr4 (295-390)||(28482024-28482119)
chr4 (206-265)||(41236471-41236530)
chr4 (207-265)||(6034168-6034226)
chr4 (303-389)||(8343177-8343263)
chr4 (295-351)||(41823920-41823976)
chr4 (206-264)||(24995024-24995082)
chr4 (324-390)||(44536781-44536846)
chr4 (324-389)||(18924530-18924595)
chr4 (322-391)||(47104542-47104611)
chr4 (207-252)||(53352492-53352537)
chr4 (205-265)||(23608359-23608419)
chr4 (295-391)||(48647732-48647828)
chr4 (326-381)||(29589777-29589831)
chr4 (219-265)||(41824006-41824052)
chr4 (300-384)||(18769114-18769198)
chr4 (206-264)||(11511380-11511437)
chr4 (219-252)||(40574916-40574949)
[»] chr8 (47 HSPs)
chr8 (295-389)||(504127-504221)
chr8 (295-389)||(12831047-12831141)
chr8 (295-389)||(15197333-15197427)
chr8 (295-389)||(40423949-40424043)
chr8 (295-391)||(14547920-14548016)
chr8 (295-389)||(1179946-1180040)
chr8 (295-390)||(37038478-37038573)
chr8 (295-389)||(23122603-23122697)
chr8 (295-389)||(34012302-34012396)
chr8 (295-388)||(5957831-5957924)
chr8 (297-390)||(44507095-44507188)
chr8 (295-391)||(10284637-10284733)
chr8 (295-389)||(15048188-15048281)
chr8 (299-391)||(16383375-16383467)
chr8 (295-370)||(8841438-8841513)
chr8 (299-393)||(34307212-34307306)
chr8 (295-384)||(10621093-10621182)
chr8 (295-389)||(43414587-43414681)
chr8 (299-391)||(24307803-24307895)
chr8 (322-389)||(20074967-20075034)
chr8 (326-391)||(4854900-4854965)
chr8 (326-391)||(24307627-24307692)
chr8 (324-389)||(30479509-30479574)
chr8 (295-392)||(42221512-42221609)
chr8 (207-265)||(504039-504097)
chr8 (300-390)||(17443824-17443914)
chr8 (207-265)||(23122515-23122573)
chr8 (204-265)||(34012211-34012272)
chr8 (299-391)||(16056411-16056503)
chr8 (306-389)||(14055609-14055692)
chr8 (295-388)||(9122196-9122279)
chr8 (207-265)||(12831171-12831229)
chr8 (324-390)||(32032724-32032789)
chr8 (204-265)||(14548046-14548107)
chr8 (295-391)||(15258935-15259031)
chr8 (207-263)||(15197459-15197515)
chr8 (205-265)||(42710210-42710270)
chr8 (223-261)||(5957958-5957996)
chr8 (211-265)||(15048103-15048157)
chr8 (211-265)||(40423865-40423919)
chr8 (207-265)||(1179858-1179916)
chr8 (219-265)||(4854793-4854839)
chr8 (207-265)||(9122309-9122367)
chr8 (207-265)||(44507006-44507063)
chr8 (322-363)||(2547122-2547162)
chr8 (322-363)||(29705488-29705528)
chr8 (324-389)||(38229429-38229493)
[»] chr6 (33 HSPs)
chr6 (295-389)||(32869678-32869772)
chr6 (295-386)||(22880664-22880755)
chr6 (295-389)||(17598554-17598648)
chr6 (295-390)||(11427615-11427712)
chr6 (295-391)||(6209471-6209567)
chr6 (303-389)||(31109414-31109500)
chr6 (299-391)||(15990052-15990144)
chr6 (299-391)||(30341370-30341462)
chr6 (295-385)||(28536494-28536582)
chr6 (295-390)||(31976247-31976342)
chr6 (299-389)||(15508034-15508124)
chr6 (295-389)||(29857827-29857921)
chr6 (300-398)||(15832568-15832666)
chr6 (295-391)||(23128133-23128229)
chr6 (295-389)||(31953036-31953130)
chr6 (295-391)||(31110767-31110861)
chr6 (206-265)||(11427742-11427801)
chr6 (299-389)||(4231548-4231638)
chr6 (323-388)||(946377-946442)
chr6 (322-391)||(12732480-12732549)
chr6 (204-265)||(29857951-29858012)
chr6 (204-265)||(32869802-32869863)
chr6 (204-265)||(17598678-17598739)
chr6 (322-384)||(9379745-9379807)
chr6 (324-390)||(22422053-22422119)
chr6 (205-265)||(22880574-22880634)
chr6 (210-265)||(15832701-15832756)
chr6 (219-265)||(31976372-31976418)
chr6 (208-265)||(946500-946557)
chr6 (322-363)||(7367675-7367715)
chr6 (322-391)||(9698239-9698307)
chr6 (219-252)||(22422009-22422042)
chr6 (322-363)||(26669943-26669983)
[»] scaffold0321 (2 HSPs)
scaffold0321 (295-400)||(10115-10220)
scaffold0321 (205-265)||(10025-10085)
[»] scaffold1268 (1 HSPs)
scaffold1268 (295-389)||(935-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (295-389)||(935-1029)
[»] scaffold0237 (2 HSPs)
scaffold0237 (295-389)||(4029-4123)
scaffold0237 (204-265)||(4153-4214)
[»] scaffold0018 (1 HSPs)
scaffold0018 (300-373)||(152514-152587)
[»] scaffold0316 (1 HSPs)
scaffold0316 (295-366)||(17077-17148)
[»] scaffold0119 (1 HSPs)
scaffold0119 (322-363)||(811-851)


Alignment Details
Target: chr5 (Bit Score: 330; Significance: 0; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 295 - 716
Target Start/End: Original strand, 36732948 - 36733348
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttctg 394  Q
    |||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  36732948 tgtgcttgtgcggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagggtgtctatgtatcattactcttctg 36733047  T
Q  395 aaaaaccttactatgagatttaacatctaaattattgaatatcttggaaacattataggattacaaaaatattttaaggaatctctcggaacaagaccaa 494  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36733048 aaaaaccttactatgagatttaacatctaaattattgaatatcttggaaacattataggattacaaaaatattttaaggaatctctcggaacaagaccaa 36733147  T
Q  495 tggaagcttgaaagaagtttttgggttatgttcactaaacaataattcctcgaaagaatccataaaattatgcaaacctgattaaaacatgaaagaagat 594  Q
    |||                     |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36733148 tgg---------------------gttatgttcactaaacaacaattcctcgaaagaatccataaaattatgtaaacctgattaaaacatgaaagaagat 36733226  T
Q  595 aaactctttttgcttggaatttctacatgatttttcatcgtaatatctacctcttctctcactctccttctttcatatttgtatttcctttcctacatgc 694  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36733227 aaactctttttgcttggaatttctacatgatttttcatcgtaatatctacctcttctctcactctccttctttcatatttgtatttcctttcctacatgc 36733326  T
Q  695 cacaatctttataccttctctc 716  Q
    ||||||||||||||||||||||    
T  36733327 cacaatctttataccttctctc 36733348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 8 - 221
Target Start/End: Original strand, 36730734 - 36730947
Alignment:
Q  8 ataatcacatcaatctccctttctacaagagtatttatcttaaatcttctgagtagtctttaaatataacttggactttggacacctcctttccaaagta 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  36730734 ataatcacatcaatctccctttctacaagagtatttatcttaaatcttctgagtagtctttaaatataacttggactttggacacctcctttcccaagta 36730833  T
Q  108 agagaccgtaccaatcgttggagtcaaagacaagtcatgtttcttcaacttcattggtctgtatcttactatgagannnnnnnnctttctttctggaaag 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||    
T  36730834 agagaccgtaccaatcgttggagtcaaagacaagtcatgtttcttcaacttcattggtctgtatcttactatgagattttttttctttctttctggaaag 36730933  T
Q  208 agtaatgatatata 221  Q
    ||||||||||||||    
T  36730934 agtaatgatatata 36730947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 295 - 391
Target Start/End: Original strand, 18520890 - 18520986
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18520890 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattattctt 18520986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 42414308 - 42414402
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  42414308 tgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctactggtgtctatgtatcattactc 42414402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 2740368 - 2740273
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2740368 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactct 2740273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 40145501 - 40145407
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  40145501 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaagggtgtctatgtatcattactc 40145407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 295 - 391
Target Start/End: Complemental strand, 13811746 - 13811650
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||    
T  13811746 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatctttactctt 13811650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 14831908 - 14831814
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||| ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14831908 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactc 14831814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 33149644 - 33149738
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||| ||||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33149644 tgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 33149738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 35785293 - 35785199
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||| ||||||||| ||||| | ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  35785293 tgtgattgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 35785199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 28177869 - 28177775
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||| ||||||||||||||  ||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  28177869 tgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 28177775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 35943898 - 35943992
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||| ||| ||||| | ||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||    
T  35943898 tgtgcttgtgtgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcataactc 35943992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 299 - 391
Target Start/End: Original strand, 3921275 - 3921367
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||||||||||| ||| |  | ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||    
T  3921275 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactctt 3921367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 295 - 391
Target Start/End: Original strand, 15409616 - 15409712
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||||||||||||  || || |||||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||||| ||||||    
T  15409616 tgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcacctaaggatgtctatgtatcataactctt 15409712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 6679792 - 6679697
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    |||| ||||||||||||||  ||||  |||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||| |||||    
T  6679792 tgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaagatgtctatgtatcataactct 6679697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 330 - 388
Target Start/End: Original strand, 36875644 - 36875702
Alignment:
Q  330 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 388  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36875644 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 36875702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 299 - 390
Target Start/End: Original strand, 2252178 - 2252269
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    ||||||||||||||| ||| |  | ||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||| |||||    
T  2252178 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactct 2252269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 295 - 391
Target Start/End: Complemental strand, 31009082 - 31008986
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||||||||||  |||  ||||||| ||||||||| ||| |||||||||| ||||||    
T  31009082 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtggaagaatgtattgtcacctaaggatgtttatgtatcataactctt 31008986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 26720610 - 26720516
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||| ||||  || |  |||||||||||||| ||| ||||| ||||||||||||||||||||||| |||||||||||||| ||||    
T  26720610 tgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 26720516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 26990359 - 26990265
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||| ||||  || |  |||||||||||||| ||| ||||| ||||||||||||||||||||||| |||||||||||||| ||||    
T  26990359 tgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 26990265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 205 - 265
Target Start/End: Complemental strand, 2740458 - 2740398
Alignment:
Q  205 aagagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||    
T  2740458 aagagtaatgatacatagacaccctttattcccatacacccttgtacatcccatgcattag 2740398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 205 - 265
Target Start/End: Original strand, 18520800 - 18520860
Alignment:
Q  205 aagagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||    
T  18520800 aagagtaatgatacatagacaccctttattttcatacacccttgtacacctcatgcattag 18520860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 298 - 390
Target Start/End: Original strand, 41470425 - 41470517
Alignment:
Q  298 gcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    ||||||||||||||||| ||||| |||||||||||||| | ||  | | ||||| ||||||||||||||| ||||||||||||| ||||||||    
T  41470425 gcttgtgcggggtccacgtgactacgtgtcagatttttatatgaattttaaaggatgtattgccacctaaaggtgtctatgtattattactct 41470517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 203 - 265
Target Start/End: Complemental strand, 40145593 - 40145531
Alignment:
Q  203 gaaagagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||| ||| ||||||||    
T  40145593 gaaagagtaatgatacatagacaccctttattctcatatacccttgtacacctcgtgcattag 40145531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 33149553 - 33149614
Alignment:
Q  204 aaagagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||| | ||||||||||    
T  33149553 aaagagtaatgatacatagacaccctttattctcgtacacccttgtacaccccatgcattag 33149614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 326 - 391
Target Start/End: Original strand, 39688934 - 39688999
Alignment:
Q  326 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||||||||||||||||||| || ||||||||||| ||||||||| |||||||||| ||||||    
T  39688934 tcagatttttgtgtgggtgtcaagggatgtattgccacttaagggtgtttatgtatcataactctt 39688999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 326 - 384
Target Start/End: Complemental strand, 10356698 - 10356639
Alignment:
Q  326 tcagatttttgtgtgggtgtcaaaggg-tgtattgccacctaagggtgtctatgtatcat 384  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||    
T  10356698 tcagatttttgtgtgggtgtcaatgggatgtattgccacctaaggatgtctatgtatcat 10356639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 322 - 389
Target Start/End: Original strand, 33825357 - 33825424
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||| |||||||||||| | |||||||||||||||||  |||||||| ||||||||||    
T  33825357 cgtgtcagatttttatgtgggtgtcaaggagtgtattgccacctaagaatgtctatgcatcattactc 33825424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 207 - 265
Target Start/End: Complemental strand, 31132516 - 31132458
Alignment:
Q  207 gagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||| ||| |||||||||||| ||||||||||||||||| ||||||||||||    
T  31132516 gagtaatgatacataaacaccctttattttcatacacccttgtacacctcatgcattag 31132458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 295 - 388
Target Start/End: Complemental strand, 16327995 - 16327902
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 388  Q
    |||||||||| | ||| |||||||   |||||||||||||| |||||||||||| || ||||||||||||||||| | | ||| ||||||||||    
T  16327995 tgtgcttgtgtgaggtgcacatgaacacgtgtcagatttttatgtgggtgtcaatggatgtattgccacctaaggatatttatctatcattact 16327902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 16115247 - 16115295
Alignment:
Q  204 aaagagtaatgatatatagacaccctttattctcatacacccttgtaca 252  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  16115247 aaagagtaatgatacatagacaccctttattctcatacactcttgtaca 16115295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 36732870 - 36732918
Alignment:
Q  217 atatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  36732870 atatagacaccctttattcccatacacccttgtacacctcatgcattag 36732918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 389
Target Start/End: Original strand, 6260035 - 6260101
Alignment:
Q  323 gtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||| ||||||||| |||||||| ||||||||||||| |||||| || ||| |||||||||||||||    
T  6260035 gtgttagatttttgcgtgggtgttaaagggtgtattgtcacctatggttgtgtatgtatcattactc 6260101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 207 - 265
Target Start/End: Complemental strand, 14831996 - 14831938
Alignment:
Q  207 gagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||||| | ||||||||||    
T  14831996 gagtaatgatacatagacaccctttattcccatacatccttgtacaccccatgcattag 14831938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 306 - 391
Target Start/End: Complemental strand, 9603896 - 9603811
Alignment:
Q  306 ggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||| |||||   ||||||||||||||||| ||||| || | |||||||  ||||||||| ||| |||||||||||||||||    
T  9603896 ggggtccatatgaccatgtgtcagatttttgtgtaggtgtgaatgagtgtattatcacctaaggatgtatatgtatcattactctt 9603811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 20073522 - 20073616
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    ||||||||||| |||||||| ||    ||||  |||||||| |||| |||||||||||||||||| || |||| | ||||||| |||||||||||    
T  20073522 tgtgcttgtgcagggtccacgtggtcacgtgcaagatttttatgtgagtgtcaaagggtgtattgtcatctaatgatgtctatatatcattactc 20073616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 207 - 265
Target Start/End: Complemental strand, 35785381 - 35785323
Alignment:
Q  207 gagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||| ||||||||| ||||||  |||||||||||||||| | ||||||||||    
T  35785381 gagtaatgatacatagacaccttttatttccatacacccttgtacaccccatgcattag 35785323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 297 - 341
Target Start/End: Complemental strand, 31132436 - 31132392
Alignment:
Q  297 tgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgg 341  Q
    |||||||||||||||||| ||||| | ||||||||||||||||||    
T  31132436 tgcttgtgcggggtccacgtgactacttgtcagatttttgtgtgg 31132392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 13811822 - 13811776
Alignment:
Q  219 atagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||| ||||||| |||||| ||||||||||| ||||||||||    
T  13811822 atagacaccatttattcccatacatccttgtacatcccatgcattag 13811776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 31009158 - 31009116
Alignment:
Q  219 atagacaccctttattctcatacacccttgtacatctcatgca 261  Q
    |||||||||||||||||||||||||| ||||||| | ||||||    
T  31009158 atagacaccctttattctcatacacctttgtacaccccatgca 31009116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 391
Target Start/End: Complemental strand, 38296270 - 38296201
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||| ||||||||||||||| | ||  ||||||||| ||||||||   ||||||||||||| ||||||    
T  38296270 cgtgtctgatttttgtgtgggtattaagaggtgtattgacacctaagatagtctatgtatcataactctt 38296201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 6e-45; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 295 - 391
Target Start/End: Complemental strand, 9058574 - 9058478
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9058574 tgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 9058478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 295 - 391
Target Start/End: Original strand, 33436106 - 33436202
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33436106 tgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 33436202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 295 - 386
Target Start/End: Complemental strand, 28863549 - 28863458
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 386  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28863549 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 28863458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 295 - 391
Target Start/End: Original strand, 10249388 - 10249484
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  10249388 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactctt 10249484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 7465741 - 7465836
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    |||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7465741 tgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactct 7465836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 295 - 386
Target Start/End: Original strand, 19930826 - 19930917
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 386  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19930826 tgtgtttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 19930917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 32505654 - 32505749
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  32505654 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactct 32505749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 13438437 - 13438343
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  13438437 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagggtgtctatgtatcattactc 13438343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 17473114 - 17473020
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  17473114 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactc 17473020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 295 - 393
Target Start/End: Complemental strand, 30915557 - 30915459
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttct 393  Q
    ||||||||| |||||||||| ||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30915557 tgtgcttgtacggggtccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttct 30915459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 5574494 - 5574589
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    |||||||||||||| ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5574494 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactct 5574589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 40701572 - 40701478
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||| ||||||||||||||| | ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  40701572 tgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 40701478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 27864798 - 27864704
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    ||||||| |||||||||||| ||| | |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  27864798 tgtgcttttgcggggtccacgtgattacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatcattactc 27864704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 28381661 - 28381755
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    ||||||||||||| |||||  ||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  28381661 tgtgcttgtgcggagtccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagggtgtctatgtatcattactc 28381755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 295 - 391
Target Start/End: Complemental strand, 20700909 - 20700813
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||| |||||||||||| ||||| |||||||||||||||||| || |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  20700909 tgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacataaggatgtctatgtatcattactctt 20700813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 40613908 - 40614002
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||||||||  || |  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  40613908 tgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 40614002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 306 - 391
Target Start/End: Original strand, 38882831 - 38882915
Alignment:
Q  306 ggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||||| ||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38882831 ggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtctatgtatcattactctt 38882915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 4060779 - 4060685
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    ||||||| |||||| ||||| | ||| |||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||    
T  4060779 tgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactc 4060685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 391
Target Start/End: Original strand, 26891510 - 26891606
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||||| || ||||||| ||||  | ||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||| ||||||    
T  26891510 tgtgcttgttcgaggtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgccacctaagggtggctatgtatcataactctt 26891606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 391
Target Start/End: Original strand, 38273148 - 38273244
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||| ||||||||||||  || || |||||||||||||||||||||||| |||||||||||||||| |||||  |||||||||||||| ||||||    
T  38273148 tgtgctagtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgccatctaagaatgtctatgtatcataactctt 38273244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 299 - 389
Target Start/End: Complemental strand, 43490211 - 43490121
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    ||||||||||||||| ||| |  | ||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||| ||||    
T  43490211 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagggtgtttatgtatcataactc 43490121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 322 - 390
Target Start/End: Complemental strand, 33436278 - 33436210
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    |||||||||||||| ||||||||||||| |||||||||||| |||||| ||||||||||||||||||||    
T  33436278 cgtgtcagatttttatgtgggtgtcaaaaggtgtattgccatctaaggatgtctatgtatcattactct 33436210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 295 - 391
Target Start/End: Complemental strand, 42257287 - 42257191
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||||||||||||  || |  |||||||||||||| ||||||||||||| | ||||||||||||||| | |||||||||||||| ||||||    
T  42257287 tgtgcttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagatgtctatgtatcataactctt 42257191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 2533217 - 2533123
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    ||||||||||||||||| |  || || |||||||||||||||||||| ||||||||| ||||||||||| ||||| |||||||||||||| |||||    
T  2533217 tgtgcttgtgcggggtctatgtggctacgtgtcagatttttgtgtgg-tgtcaaaggatgtattgccacttaaggatgtctatgtatcataactct 2533123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 299 - 389
Target Start/End: Complemental strand, 38732444 - 38732354
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    ||||||||||||||| |||||  | ||||||||||||||||||||||||| || ||||||| ||| ||||||||| |||||||||| ||||    
T  38732444 cttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagggtgtttatgtatcataactc 38732354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 7465650 - 7465711
Alignment:
Q  204 aaagagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||    
T  7465650 aaagagtaatgatacatagacaccctttattcccatacacccttgtacacctcatgcattag 7465711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 299 - 371
Target Start/End: Original strand, 2997497 - 2997569
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggt 371  Q
    ||||||||||||||| ||| |  | ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2997497 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggt 2997569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 299 - 391
Target Start/End: Original strand, 45097745 - 45097837
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||||||||||| ||| |  | |||||||||||||| |||||||||| || ||||||||||||||||| ||| |||||||||| ||||||    
T  45097745 cttgtgcggggtccatatggccacatgtcagatttttgtatgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactctt 45097837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 202 - 265
Target Start/End: Original strand, 19930733 - 19930796
Alignment:
Q  202 ggaaagagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||||||||| ||||||||| ||||||| |||||||||||||||| ||||||||||||    
T  19930733 ggaaagagtaatgatacatagacaccttttattcccatacacccttgtacacctcatgcattag 19930796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 207 - 265
Target Start/End: Original strand, 10249300 - 10249358
Alignment:
Q  207 gagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||    
T  10249300 gagtaatgatacatagacaccctttattctcatacacccttgtacaccccatgcattag 10249358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 207 - 265
Target Start/End: Complemental strand, 17473202 - 17473144
Alignment:
Q  207 gagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||    
T  17473202 gagtaatgatacatagacaccctttattcccatacacccttgtacacctcatgcattag 17473144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 17820010 - 17820104
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||| ||||| ||||||||| | ||  | ||||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||| ||||    
T  17820010 tgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctatagttgtctatgtatcataactc 17820104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 207 - 265
Target Start/End: Complemental strand, 28863637 - 28863579
Alignment:
Q  207 gagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||    
T  28863637 gagtaatgatacatagacaccctttattcccatacacccttgtacacctcatgcattag 28863579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 306 - 388
Target Start/End: Complemental strand, 41575220 - 41575138
Alignment:
Q  306 ggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 388  Q
    ||||||||||||||  | ||||| |||||||||||  |||||||||||||||| ||| |||||| ||||||||||||||||||    
T  41575220 ggggtccacatgaccacatgtcaaatttttgtgtgaatgtcaaagggtgtattaccatctaaggatgtctatgtatcattact 41575138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 295 - 383
Target Start/End: Complemental strand, 3440073 - 3439985
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatca 383  Q
    |||||||||||||||||||| | |   | ||| ||||||||||||||||||| | | ||||||||||||||||||||||||| ||||||    
T  3440073 tgtgcttgtgcggggtccacgtaatcacatgttagatttttgtgtgggtgtccaggagtgtattgccacctaagggtgtctacgtatca 3439985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 27864874 - 27864815
Alignment:
Q  206 agagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||| |||| |||||    
T  27864874 agagtaatgatacattgacaccctttattctcatacacccttgtacatcccatgtattag 27864815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 322 - 391
Target Start/End: Complemental strand, 17823851 - 17823782
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||||||||||||||||||||  | |  ||||||||||||||||| ||| |||||||||||||||||    
T  17823851 cgtgtcagatttttgtgtgggtgttcaggaatgtattgccacctaaggatgtatatgtatcattactctt 17823782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 207 - 264
Target Start/End: Original strand, 32505566 - 32505623
Alignment:
Q  207 gagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcatta 264  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||| | |||||||||    
T  32505566 gagtaatgatacatagacactctttattctcatacacccttgtacaccccatgcatta 32505623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 297 - 390
Target Start/End: Complemental strand, 36168928 - 36168835
Alignment:
Q  297 tgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    |||||||||||||||||  || |  ||||||| ||||||||||||| || ||||| ||||||| || |||||| |||||||||||||| |||||    
T  36168928 tgcttgtgcggggtccatgtggccacgtgtcaaatttttgtgtgggagttaaaggatgtattgtcatctaaggatgtctatgtatcataactct 36168835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 209 - 265
Target Start/End: Original strand, 33436020 - 33436076
Alignment:
Q  209 gtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||  ||||||||| |||||||||||||||||||||||| ||||||||||||    
T  33436020 gtaatgatgcatagacaccttttattctcatacacccttgtacacctcatgcattag 33436076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 3738037 - 3737986
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtc 346  Q
    |||||||||||||||||||||||||  | |||||||||||||||||||||||    
T  3738037 tgtgcttgtgcggggtccacatgaccacatgtcagatttttgtgtgggtgtc 3737986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 299 - 391
Target Start/End: Complemental strand, 13365443 - 13365349
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg--gtgtctatgtatcattactctt 391  Q
    ||||||||||||||| |||    | ||||||||||||||||||||||||| |||| |||||||| ||||||  |||| |||||||||| ||||||    
T  13365443 cttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtatattgccatctaagggtgtgtttatgtatcataactctt 13365349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 207 - 265
Target Start/End: Original strand, 5574418 - 5574476
Alignment:
Q  207 gagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||   ||||||||||    
T  5574418 gagtaatgatacatagacaccctttattcccatacacccttgtacacgccatgcattag 5574476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 207 - 265
Target Start/End: Complemental strand, 13438525 - 13438467
Alignment:
Q  207 gagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||||| | ||||||||||    
T  13438525 gagtaatgatacatagacaccctttattcccatacatccttgtacaccccatgcattag 13438467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 324 - 391
Target Start/End: Original strand, 15428775 - 15428842
Alignment:
Q  324 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||||||||||||| |||| || |||||||| ||||| ||||| ||| |||||||||| ||||||    
T  15428775 tgtcagatttttgtgtgagtgttaaggggtgtatggccacataaggatgtttatgtatcataactctt 15428842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 207 - 265
Target Start/End: Complemental strand, 9058662 - 9058604
Alignment:
Q  207 gagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||||||| | ||||||||||| ||||||| |||||||| | ||||||||||    
T  9058662 gagtaatgatatataaataccctttattcccatacactcttgtacaccccatgcattag 9058604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 206 - 252
Target Start/End: Original strand, 28381572 - 28381618
Alignment:
Q  206 agagtaatgatatatagacaccctttattctcatacacccttgtaca 252  Q
    |||||||||||| ||||||||||||||||| |||||| |||||||||    
T  28381572 agagtaatgatacatagacaccctttattcccatacatccttgtaca 28381618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 207 - 265
Target Start/End: Original strand, 38882729 - 38882787
Alignment:
Q  207 gagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||| ||||| ||| ||||||| |||||||||||||||| | ||||||||||    
T  38882729 gagtaatgatacatagagaccatttattcccatacacccttgtacaccccatgcattag 38882787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 40701661 - 40701602
Alignment:
Q  206 agagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||||| ||||||||| ||||||  |||||||||||||||| |  |||||||||    
T  40701661 agagtaatgatacatagacaccttttatttccatacacccttgtacacccgatgcattag 40701602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 20700985 - 20700943
Alignment:
Q  219 atagacaccctttattctcatacacccttgtacatctcatgca 261  Q
    ||||||||||||||||| |||||||||||||||| | ||||||    
T  20700985 atagacaccctttattcccatacacccttgtacaccccatgca 20700943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 44152093 - 44152051
Alignment:
Q  223 acaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||| ||||||| |||||||||||||| ||||||||||||||    
T  44152093 acaccttttattcgcatacacccttgtatatctcatgcattag 44152051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 252
Target Start/End: Complemental strand, 2533301 - 2533260
Alignment:
Q  211 aatgatatatagacaccctttattctcatacacccttgtaca 252  Q
    |||| |||||| ||||||||||||| ||||||||||||||||    
T  2533301 aatgttatatatacaccctttattcccatacacccttgtaca 2533260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 363
Target Start/End: Original strand, 16096874 - 16096914
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 363  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  16096874 cgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 16096914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 40613832 - 40613865
Alignment:
Q  219 atagacaccctttattctcatacacccttgtaca 252  Q
    ||||||||||||||||| ||||||||||||||||    
T  40613832 atagacaccctttattcccatacacccttgtaca 40613865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 363
Target Start/End: Complemental strand, 42849833 - 42849793
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 363  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  42849833 cgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 42849793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 2e-42; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 295 - 391
Target Start/End: Complemental strand, 2582009 - 2581913
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2582009 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 2581913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 9474882 - 9474976
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9474882 tgtgtttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 9474976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 3000413 - 3000319
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3000413 tgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 3000319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 295 - 393
Target Start/End: Original strand, 38632327 - 38632425
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttct 393  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  38632327 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaagggtgtctatgtatcattactcttct 38632425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 48716288 - 48716382
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  48716288 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattactc 48716382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 295 - 391
Target Start/End: Complemental strand, 38595248 - 38595152
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  38595248 tgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaggtgtttatgtatcattactctt 38595152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 51898689 - 51898784
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  51898689 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactct 51898784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 27564741 - 27564835
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||||||||| ||| | |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  27564741 tgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcattactc 27564835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 47452326 - 47452420
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  47452326 tgtgcttgtgcgggatccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 47452420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 295 - 391
Target Start/End: Original strand, 8346394 - 8346490
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||||||| |||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
T  8346394 tgtgcttgtgcagggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtgactatgtatcattactctt 8346490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 50630552 - 50630457
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||  |||||| ||||||||||||||||||| ||||||||||||||||||    
T  50630552 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaagggtatctatgtatcattactct 50630457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 295 - 391
Target Start/End: Complemental strand, 32813341 - 32813245
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||||||||||||  ||||  |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||    
T  32813341 tgtgcttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactctt 32813245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 295 - 386
Target Start/End: Original strand, 44548382 - 44548473
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 386  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||| ||||| ||||||||||||||||| | ||||||||||||||||    
T  44548382 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgccacctaaagatgtctatgtatcatta 44548473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 296 - 388
Target Start/End: Original strand, 11152385 - 11152476
Alignment:
Q  296 gtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 388  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||| ||||||||    
T  11152385 gtgcttgtgcggggtctacatgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccacctaa-ggtgtctatgtttcattact 11152476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 41758899 - 41758804
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    |||| ||||||||||||||  ||||| |||||||||||||||||||| ||||||||||||||||||||  ||| ||||||||||||||||||||||    
T  41758899 tgtgtttgtgcggggtccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgccatttaatggtgtctatgtatcattactct 41758804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 43226 - 43132
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    ||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||| ||||||| | ||||||  |||||||||||||||||||    
T  43226 tgtgcttgtgcggagtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtctcctaagactgtctatgtatcattactc 43132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 37649292 - 37649198
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||  | ||| ||||  ||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||    
T  37649292 tgtgcttgtgcggaattcacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaagatgtctatgtatcattactc 37649198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 299 - 389
Target Start/End: Original strand, 50591010 - 50591100
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    ||||||||||||||| ||| |  | ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||    
T  50591010 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 50591100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 299 - 391
Target Start/End: Original strand, 5959010 - 5959102
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||||||||||| |||||  | |||||||||||||||||||||||||  ||||||||||||| ||||||||| |||||||||| ||||||    
T  5959010 cttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagggtgtttatgtatcataactctt 5959102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 295 - 391
Target Start/End: Original strand, 49811533 - 49811629
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||||||||| ||| | ||| || |||||||||||||||||||| ||||||| ||||||||| ||||||||| ||||||| |||||| ||||||    
T  49811533 tgtgcttgtgcggagtctatatggctacgtgtcagatttttgtgtggatgtcaaatggtgtattgtcacctaaggatgtctatctatcataactctt 49811629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 322 - 391
Target Start/End: Original strand, 23597124 - 23597193
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||||||| ||||||| |||||| |||||||||||||||| | |||||||||||||||||||||    
T  23597124 cgtgtcagatttttatgtgggtatcaaagagtgtattgccacctaatgatgtctatgtatcattactctt 23597193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 205 - 265
Target Start/End: Original strand, 9474792 - 9474852
Alignment:
Q  205 aagagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||    
T  9474792 aagagtaatgatacatagacactctttattctcatacacccttgtacatcccatgcattag 9474852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 295 - 359
Target Start/End: Complemental strand, 13414855 - 13414791
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattg 359  Q
    |||||||||| ||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||    
T  13414855 tgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattg 13414791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 299 - 391
Target Start/End: Complemental strand, 26274522 - 26274430
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||| || ||||| |||||  ||||||||||||| ||||| ||||||| | ||||||||||| |||||||||||||||||||||| ||||    
T  26274522 cttgtgcaggatccacgtgactatgtgtcagatttttctgtggatgtcaaatgatgtattgccacataagggtgtctatgtatcattattctt 26274430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 26274612 - 26274553
Alignment:
Q  206 agagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||    
T  26274612 agagtaatgatacatagacaccctttattcccatacacccttgtgcatctcatgcattag 26274553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 299 - 389
Target Start/End: Original strand, 41608503 - 41608593
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    ||||| ||||||||| ||| |  | ||||||||||||||||| ||||||| |||||||||||||||||||| ||| |||||||||| ||||    
T  41608503 cttgtacggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 41608593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 207 - 265
Target Start/End: Complemental strand, 41758987 - 41758929
Alignment:
Q  207 gagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||    
T  41758987 gagtaatgatacatagacaccctttattctcatacacccttgtacaccccatgcattag 41758929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 295 - 391
Target Start/End: Original strand, 45044566 - 45044662
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||| ||||||||||||||  || || | |||||||||||||| ||||||||||| |||||||||||||||||||   | |||||||||| ||||||    
T  45044566 tgtgtttgtgcggggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgccacctaaggaaatgtatgtatcataactctt 45044662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 27564652 - 27564711
Alignment:
Q  206 agagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||| | ||||||||||    
T  27564652 agagtaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 27564711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 3302539 - 3302633
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||  |||||||| |||| | ||||||||||||||||||||||||| | |  | ||||| ||||||||| ||| |||||||||||||||    
T  3302539 tgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatatattgtcacctaaggatgtatatgtatcattactc 3302633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 207 - 265
Target Start/End: Original strand, 48716200 - 48716258
Alignment:
Q  207 gagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||| | ||||||||||    
T  48716200 gagtaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 48716258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 37649379 - 37649322
Alignment:
Q  208 agtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||| ||||||||||||||||| |||||||||||||||| | ||||||||||    
T  37649379 agtaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 37649322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 322 - 382
Target Start/End: Complemental strand, 26440801 - 26440741
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatc 382  Q
    |||||||||||||||||||||||| ||||||||||||| || |||||| ||||||| ||||    
T  26440801 cgtgtcagatttttgtgtgggtgttaaagggtgtattgtcatctaaggatgtctatctatc 26440741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 2582098 - 2582039
Alignment:
Q  206 agagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||||| ||| |||||||||||||| ||||||||||||||| |||||| |||||    
T  2582098 agagtaatgatacataaacaccctttattctaatacacccttgtacacctcatgtattag 2582039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 299 - 389
Target Start/End: Complemental strand, 47748532 - 47748443
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||| |||| ||| |  | |||||||||||| | |||||||||| |||||||||||||||||||||| | |||||||||| ||||    
T  47748532 cttgtgcgggatccatatggccacatgtcagatttttatatgggtgtcaa-gggtgtattgccacctaagggtatttatgtatcataactc 47748443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 295 - 384
Target Start/End: Complemental strand, 44454073 - 44453984
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 384  Q
    |||||||||| ||| ||||| | ||  | |||||||||||||||||||| ||||  | ||||||||||| ||| ||||||||||||||||    
T  44454073 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtgtgggtatcaagagatgtattgccacttaaaggtgtctatgtatcat 44453984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 390
Target Start/End: Original strand, 37926471 - 37926539
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    |||||||||||||| ||||||||| ||| | ||||||||||||||| | | |||||||||||| |||||    
T  37926471 cgtgtcagatttttatgtgggtgttaaaagatgtattgccacctaaagatatctatgtatcataactct 37926539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 43315 - 43256
Alignment:
Q  206 agagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||||| ||||| |||||||||||| |||||| |||||||| | ||||||||||    
T  43315 agagtaatgatacatagataccctttattcttatacactcttgtacaccccatgcattag 43256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 6260964 - 6260870
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    ||||||| |||||||||||| ||||  | ||| |||||||| |||||||||  | ||||||||| |||||||||| | ||||| |||||| ||||    
T  6260964 tgtgcttatgcggggtccacgtgaccacatgttagatttttatgtgggtgttcaggggtgtattaccacctaaggatatctatctatcataactc 6260870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 221 - 265
Target Start/End: Original strand, 38632253 - 38632297
Alignment:
Q  221 agacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||||||| |||||||||||||||| | ||||||||||    
T  38632253 agacaccctttattcccatacacccttgtacaccccatgcattag 38632297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 362
Target Start/End: Complemental strand, 48489394 - 48489328
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 362  Q
    |||||||||||||| ||||| ||||  | |||||||||||||||||| ||||  ||||||||||||||    
T  48489394 tgtgcttgtgcgggatccacgtgaccacatgtcagatttttgtgtggatgtc-cagggtgtattgcca 48489328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 300 - 390
Target Start/End: Complemental strand, 7740822 - 7740732
Alignment:
Q  300 ttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    ||||| |||||||||||  |  ||||||| |||||| ||| |||||||| || ||||||| ||| ||||| |||| ||||||||| |||||    
T  7740822 ttgtgtggggtccacatagccacgtgtcatatttttatgtaggtgtcaatggatgtattgtcacataaggttgtcaatgtatcataactct 7740732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 322 - 384
Target Start/End: Original strand, 34340072 - 34340133
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 384  Q
    ||||||||||||||||||||   ||||  |||||||| ||||||||| |||||||||||||||    
T  34340072 cgtgtcagatttttgtgtggca-tcaacaggtgtattaccacctaagagtgtctatgtatcat 34340133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 207 - 261
Target Start/End: Original strand, 47452238 - 47452292
Alignment:
Q  207 gagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgca 261  Q
    ||||||||||| |||||||| |||||||| |||||| ||||||||| | ||||||    
T  47452238 gagtaatgatacatagacactctttattcccatacatccttgtacaccccatgca 47452292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 219 - 249
Target Start/End: Original strand, 49811457 - 49811487
Alignment:
Q  219 atagacaccctttattctcatacacccttgt 249  Q
    |||||||||||||||||||||||||||||||    
T  49811457 atagacaccctttattctcatacacccttgt 49811487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 50630628 - 50630582
Alignment:
Q  219 atagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||| |||||||||||||||||||||||| |  |||||||||    
T  50630628 atagacaccatttattctcatacacccttgtacaccctatgcattag 50630582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 363
Target Start/End: Complemental strand, 750279 - 750239
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 363  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  750279 cgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 750239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 363
Target Start/End: Original strand, 4401454 - 4401494
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 363  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  4401454 cgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 4401494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 363
Target Start/End: Original strand, 7447951 - 7447991
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 363  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  7447951 cgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 7447991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 295 - 364
Target Start/End: Original strand, 44334176 - 44334245
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacc 364  Q
    |||| |||||| |||||||  ||||| |||||||| ||||||||||| |||||| | ||||||| |||||    
T  44334176 tgtgtttgtgctgggtccatgtgactacgtgtcaggtttttgtgtggatgtcaatgtgtgtattaccacc 44334245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 363
Target Start/End: Complemental strand, 50448234 - 50448194
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 363  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  50448234 cgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 50448194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 2e-41; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 295 - 393
Target Start/End: Original strand, 27714897 - 27714995
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttct 393  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  27714897 tgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgtatcattactcttct 27714995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 53982105 - 53982011
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53982105 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 53982011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 33644294 - 33644200
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33644294 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagggtgtctatgtatcattactc 33644200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 295 - 388
Target Start/End: Complemental strand, 31456783 - 31456690
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 388  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  31456783 tgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgcctatgggtgtctatgtatcattact 31456690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 295 - 391
Target Start/End: Complemental strand, 49607508 - 49607412
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||| ||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49607508 tgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 49607412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 295 - 384
Target Start/End: Complemental strand, 52629394 - 52629305
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 384  Q
    ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52629394 tgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 52629305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 295 - 391
Target Start/End: Original strand, 54868901 - 54868997
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||| ||||||||||||||| | ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  54868901 tgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactctt 54868997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 8076487 - 8076393
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  8076487 tgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagggtgtttatgtatcattactc 8076393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 316 - 391
Target Start/End: Original strand, 11095380 - 11095455
Alignment:
Q  316 tgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11095380 tgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 11095455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 17470499 - 17470404
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    |||||||||| ||||||||| ||||| |||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||    
T  17470499 tgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaaggtgtctatgtatcattactct 17470404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 26141538 - 26141632
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||| ||||||||  ||||  |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||    
T  26141538 tgtgcttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 26141632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 299 - 385
Target Start/End: Original strand, 48587101 - 48587187
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 385  Q
    |||||||||| ||||| ||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  48587101 cttgtgcgggatccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatgtatcatt 48587187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 33118872 - 33118953
Alignment:
Q  310 tccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||| ||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  33118872 tccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcataactctt 33118953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 304 - 391
Target Start/End: Original strand, 36707439 - 36707526
Alignment:
Q  304 gcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||| ||||| | ||| |||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  36707439 gcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaagggtgtattgtcacctaagggtatctatgtatcattactctt 36707526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 14623845 - 14623939
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||| | |||||||||||   | |||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  14623845 tgtgcttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatgtatcattactc 14623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 30801739 - 30801829
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 385  Q
    |||||||||| |||||||| |||||| | ||||| |||||||||||||| ||||||||||||||  |||||||||||||||||||||||||    
T  30801739 tgtgcttgtgtggggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaagggtgtctatgtatcatt 30801829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 295 - 384
Target Start/End: Complemental strand, 26754789 - 26754700
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 384  Q
    |||||||||||||||||||  ||||  | |||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||    
T  26754789 tgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccacctaagggtgtctatgaatcat 26754700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 35536720 - 35536625
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    ||||||||||   ||||||||||||  ||||||| |||||| ||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||    
T  35536720 tgtgcttgtgtaaggtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgccacataaggatgtctatgtatcattactct 35536625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 295 - 388
Target Start/End: Original strand, 13898061 - 13898154
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 388  Q
    |||||||||| | |||||||||||   |||||||||||||| |||||||||||| |||||||||||||||||||| ||| ||| ||||||||||    
T  13898061 tgtgcttgtgtgaggtccacatgaacacgtgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtttatctatcattact 13898154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 295 - 391
Target Start/End: Complemental strand, 11907465 - 11907369
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||||||||||||||| |||||  | ||||||||||||||||| ||||  | | |||||||| |||||||||||||||||||||||| ||||||    
T  11907465 tgtgcttgtgcggggtccatatgaccacatgtcagatttttgtgtgagtgttcaggtgtgtattgtcacctaagggtgtctatgtatcataactctt 11907369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 8956856 - 8956761
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    ||||||||||   |||||||||||   ||||||| |||||| ||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||    
T  8956856 tgtgcttgtgtaaggtccacatgaacacgtgtcacatttttatgtgggtgtcaaaggatgtattgccacataaggatgtctatgtatcattactct 8956761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 322 - 391
Target Start/End: Original strand, 11347955 - 11348024
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||||||||||||| ||||||||| ||||||| ||||||||| |||||||||||||| ||||||    
T  11347955 cgtgtcagatttttgtgtggatgtcaaaggatgtattgtcacctaaggatgtctatgtatcataactctt 11348024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 322 - 390
Target Start/End: Original strand, 24699987 - 24700055
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    |||| ||||||||| ||||||||||||| |||||||||||| |||||| ||||||||||||||||||||    
T  24699987 cgtgccagatttttatgtgggtgtcaaaaggtgtattgccaactaaggatgtctatgtatcattactct 24700055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 295 - 391
Target Start/End: Original strand, 41189770 - 41189866
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||||||||||||  || |  ||||||| |||||| ||||||||||||| | ||||||||||||||||| ||| |||||||||| ||||||    
T  41189770 tgtgcttgtgcggggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacctaaggatgtatatgtatcataactctt 41189866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 20764921 - 20765015
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    ||||||||| |||||||||  || |  |||||||||||||||||||||||| |||| ||||||| |||||||||| ||||||||| |||| ||||    
T  20764921 tgtgcttgtacggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaaggatgtctatgtctcataactc 20765015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 299 - 389
Target Start/End: Original strand, 45058563 - 45058652
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    ||||||||||||||| |||    | |||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||| ||||    
T  45058563 cttgtgcggggtccatatggtcacatgtcagatttttatgtgggtgtcaa-gggtgtattgccacctaagggtgtttatgtatcataactc 45058652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 47531959 - 47531865
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||||| || ||| |  ||||||||||| |||||||| ||| ||| |||||||||||| |||||| |||||||||||||| ||||    
T  47531959 tgtgcttgtgcggggttcatatggccacgtgtcagattcttgtgtggatgttaaaaggtgtattgccatctaaggatgtctatgtatcataactc 47531865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 51419366 - 51419460
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    ||||||||||||||||| |  || |  |||||||||||||||||||||||| ||||| ||||||| || |||||| |||||||||||||| ||||    
T  51419366 tgtgcttgtgcggggtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtattgtcatctaaggatgtctatgtatcataactc 51419460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 48587016 - 48587077
Alignment:
Q  204 aaagagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||| ||||||||||    
T  48587016 aaagagtaatgatacatagacaccctttattcccatatacccttgtacatcccatgcattag 48587077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 205 - 265
Target Start/End: Original strand, 11095283 - 11095343
Alignment:
Q  205 aagagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |  |||||||||    
T  11095283 aagagtaatgatacatagacaccctttattctcatacacccttgtacacccgatgcattag 11095343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 9563093 - 9562998
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    |||| |||||| || ||||| ||||| |||||||||||||| | ||| ||||||||| ||||||| || |||| ||||| ||||||||||||||||    
T  9563093 tgtgtttgtgcaggatccacgtgactacgtgtcagatttttatatggatgtcaaaggttgtattgtcatctaatggtgtttatgtatcattactct 9562998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 41080790 - 41080709
Alignment:
Q  307 gggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||  | | ||||||||||| |||||||||||||||||| |||| | |||||| |||||||||||||||||||    
T  41080790 gggtccacatgaccacatatcagatttttgcgtgggtgtcaaagggtgttttgcta-ctaaggatgtctatgtatcattactc 41080709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 207 - 265
Target Start/End: Complemental strand, 49607596 - 49607538
Alignment:
Q  207 gagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||  |||||||||||    
T  49607596 gagtaatgatacatagacaccctttattcccatacacccttgtacacgtcatgcattag 49607538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 33644385 - 33644324
Alignment:
Q  204 aaagagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||||||| ||||||||||||||||| ||||||||||| |||| | ||||||||||    
T  33644385 aaagagtaatgatacatagacaccctttattcccatacacccttatacaccccatgcattag 33644324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 322 - 391
Target Start/End: Original strand, 35965807 - 35965876
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||||||| ||||||||||||||| ||||||  ||| ||||| ||| |||||||||||||||||    
T  35965807 cgtgtcagatttttatgtgggtgtcaaaggatgtattatcacttaaggatgtatatgtatcattactctt 35965876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 52629485 - 52629424
Alignment:
Q  204 aaagagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||||||| |||||||||| |||||  |||||||||||||||||| ||||||||||    
T  52629485 aaagagtaatgatacatagacacccattatttccatacacccttgtacatcccatgcattag 52629424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 299 - 367
Target Start/End: Original strand, 36331339 - 36331407
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaa 367  Q
    ||||||||||||||| ||| |  | ||||||||||||||||||||||||| ||||| ||||||||||||    
T  36331339 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgcattgccacctaa 36331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 327 - 390
Target Start/End: Original strand, 36331416 - 36331479
Alignment:
Q  327 cagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    ||||||||||||||| |||||| ||||| ||||||| |||||||||| |||||||||| |||||    
T  36331416 cagatttttgtgtggatgtcaaggggtgcattgccatctaagggtgtttatgtatcataactct 36331479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 207 - 265
Target Start/End: Complemental strand, 53982193 - 53982135
Alignment:
Q  207 gagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||||| | ||||||||||    
T  53982193 gagtaatgatacatagacaccctttattcccatacaaccttgtacaccccatgcattag 53982135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 42823197 - 42823116
Alignment:
Q  303 tgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 384  Q
    ||||||||||| |||||  | ||||| |||||| |||||||||||| ||||||||| |||| ||| ||||| ||||||||||    
T  42823197 tgcggggtccatatgaccacatgtcaaatttttttgtgggtgtcaaggggtgtattaccacataatggtgtttatgtatcat 42823116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 265
Target Start/End: Complemental strand, 9563179 - 9563123
Alignment:
Q  209 gtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||| ||||| ||||||||||| |||||||| ||||||| ||||||||||||    
T  9563179 gtaatgatacatagataccctttattcccatacacctttgtacaactcatgcattag 9563123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 17470588 - 17470529
Alignment:
Q  206 agagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||||| ||||||||| ||||||||||||||   ||||||||| ||||||||||    
T  17470588 agagtaatgatacatagacaccatttattctcatacatatttgtacatcccatgcattag 17470529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 322 - 390
Target Start/End: Original strand, 21746214 - 21746284
Alignment:
Q  322 cgtgtcagatttttgtgtggg--tgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    |||||||||||||||||||||  |||| | |  ||||||||||||||||| ||| ||||||||||||||||    
T  21746214 cgtgtcagatttttgtgtgggggtgtccaggaatgtattgccacctaaggatgtatatgtatcattactct 21746284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 48375712 - 48375807
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    |||||||||||||||||||  ||||  |  ||||||||||||| ||| | |  | |||||||||| |||||||||||||||||| ||||| |||||    
T  48375712 tgtgcttgtgcggggtccatgtgaccacacgtcagatttttgtatggattttcaggggtgtattgtcacctaagggtgtctatgaatcataactct 48375807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 324 - 391
Target Start/End: Original strand, 1758491 - 1758560
Alignment:
Q  324 tgtcagatttttgtgtgggtgtcaa--agggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||||||||||||||||||   ||||||||||| ||||| || || ||||||||||| ||||||    
T  1758491 tgtcagatttttgtgtgggtgtcaaggggggtgtattgcaacctatggttgactatgtatcataactctt 1758560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 207 - 265
Target Start/End: Complemental strand, 31456871 - 31456813
Alignment:
Q  207 gagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||| ||| ||||||||||||| ||| |||||||||||| | ||||||||||    
T  31456871 gagtaatgatacataaacaccctttattcccatgcacccttgtacaccccatgcattag 31456813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 295 - 393
Target Start/End: Complemental strand, 35093679 - 35093581
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttct 393  Q
    |||||||||  || || ||||||||  | ||||||||||||| |||| ||||||| | ||||||| ||||||| | |||||||||||| | ||||||||    
T  35093679 tgtgcttgtatggagttcacatgaccacatgtcagatttttgcgtggatgtcaaatgttgtattgtcacctaaagttgtctatgtatcgtaactcttct 35093581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 386
Target Start/End: Original strand, 25407180 - 25407245
Alignment:
Q  322 cgtgtcagattttt-gtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 386  Q
    |||||||||||||| ||||| ||||||| |||| |||||||||||| || ||| ||||||||||||    
T  25407180 cgtgtcagattttttgtgtgtgtgtcaaggggtatattgccacctatggttgtgtatgtatcatta 25407245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 35965712 - 35965757
Alignment:
Q  219 atagacaccctttattctcatacacccttgtacatctcatgcatta 264  Q
    ||||||||| |||||||||||||||||||||||| |||||| ||||    
T  35965712 atagacaccttttattctcatacacccttgtacacctcatgaatta 35965757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 36707347 - 36707404
Alignment:
Q  208 agtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||| ||||||||| ||||||| ||||||  |||||||| ||||||||||||    
T  36707347 agtaatgatacatagacaccttttattcccatacattcttgtacacctcatgcattag 36707404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 54868810 - 54868871
Alignment:
Q  204 aaagagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||||||| ||||||||| ||||||  |||||||||||||||| |  |||||||||    
T  54868810 aaagagtaatgatacatagacaccttttatttccatacacccttgtacaccctatgcattag 54868871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 20764845 - 20764891
Alignment:
Q  219 atagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||| |||||||||||||||||||||||| | ||| ||||||    
T  20764845 atagacaccatttattctcatacacccttgtacaccccatacattag 20764891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 30801663 - 30801696
Alignment:
Q  219 atagacaccctttattctcatacacccttgtaca 252  Q
    ||||||||| ||||||||||||||||||||||||    
T  30801663 atagacaccttttattctcatacacccttgtaca 30801696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 35093754 - 35093713
Alignment:
Q  220 tagacaccctttattctcatacacccttgtacatctcatgca 261  Q
    |||||| | |||||||||||||||| ||||||||||||||||    
T  35093754 tagacatcatttattctcatacacctttgtacatctcatgca 35093713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 363
Target Start/End: Original strand, 52629954 - 52629994
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 363  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  52629954 cgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 52629994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 363
Target Start/End: Complemental strand, 53581832 - 53581792
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 363  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  53581832 cgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 53581792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 4e-40; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 295 - 391
Target Start/End: Complemental strand, 7389483 - 7389387
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7389483 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactctt 7389387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 295 - 391
Target Start/End: Original strand, 8080389 - 8080485
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||||||||||||| ||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8080389 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 8080485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 295 - 399
Target Start/End: Complemental strand, 38837311 - 38837207
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttctg 394  Q
    |||||||||||||||||||| ||||| |||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||| ||    
T  38837311 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccacctaagggtgtctatgtatcattactcttttg 38837212  T
Q  395 aaaaa 399  Q
    |||||    
T  38837211 aaaaa 38837207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 36361919 - 36362014
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    |||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36361919 tgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgtatcattactct 36362014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 38267134 - 38267040
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  38267134 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacataagggtgtctatgtatcattactc 38267040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 3434656 - 3434561
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    |||||||||||||| ||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3434656 tgtgcttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactct 3434561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 36362120 - 36362025
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    |||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  36362120 tgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgtatcattactct 36362025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 19329936 - 19329842
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||||||||| ||| | |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  19329936 tgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcattactc 19329842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 35137627 - 35137533
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||| ||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  35137627 tgtgtttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatttatcattactc 35137533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 295 - 386
Target Start/End: Complemental strand, 3784089 - 3783998
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 386  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  3784089 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcatta 3783998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 4999520 - 4999614
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||| ||||||||||||||| ||||| ||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  4999520 tgtgtttgtgcggggtccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 4999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 295 - 391
Target Start/End: Original strand, 19436193 - 19436289
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||| |||||| ||||| ||||| |||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||    
T  19436193 tgtgcttatgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtctatgtatcattactctt 19436289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 295 - 391
Target Start/End: Complemental strand, 40957801 - 40957705
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||||| |||| ||||| ||||| |||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||    
T  40957801 tgtgcttgtacgggatccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccacctaagagtgtctatgtatcattactctt 40957705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 295 - 386
Target Start/End: Complemental strand, 3694461 - 3694370
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 386  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||| ||||||||    
T  3694461 tgtgcttgtgcgggatccacatgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgtcacctaagggtgtgtatatatcatta 3694370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 299 - 389
Target Start/End: Complemental strand, 8238303 - 8238212
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta-agggtgtctatgtatcattactc 389  Q
    ||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||    
T  8238303 cttgtgcggggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctacagggtgtttatgtatcataactc 8238212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 299 - 392
Target Start/End: Complemental strand, 38044287 - 38044194
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttc 392  Q
    ||||||||||||||| ||| || | |||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||| |||||||    
T  38044287 cttgtgcggggtccatatggctacatgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtttatgtatcataactcttc 38044194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 46374808 - 46374902
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||||||||  || |  |||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||| ||||    
T  46374808 tgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcataactc 46374902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 295 - 388
Target Start/End: Original strand, 32951499 - 32951592
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 388  Q
    |||||||||||||||||||| ||||| ||||| |||||||||||||| ||| ||||| ||||||| || ||||| |||||||||||||||||||    
T  32951499 tgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtggatgttaaaggatgtattgtcatctaagagtgtctatgtatcattact 32951592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 299 - 390
Target Start/End: Complemental strand, 22343451 - 22343360
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    ||||||||||||||| |||    | ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||    
T  22343451 cttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactct 22343360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 299 - 390
Target Start/End: Complemental strand, 41915831 - 41915740
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    ||||||||||||||| ||| |  | |||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||| |||||    
T  41915831 cttgtgcggggtccatatggccacatgtcagatttttgtgtaggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactct 41915740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 21234495 - 21234401
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||||| ||  || || ||||||| ||||||||||| |||||||||||||||||| ||||||||| |||||||||||||| ||||    
T  21234495 tgtgcttgtgcggggtacatgtggctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatgtatcataactc 21234401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 295 - 384
Target Start/End: Complemental strand, 35522970 - 35522881
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 384  Q
    |||||||||||||| |||| ||| |  |||||||||||||||||||||||| ||| ||||||||||||| ||||| ||||||||||||||    
T  35522970 tgtgcttgtgcgggatccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaaggatgtctatgtatcat 35522881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 323 - 391
Target Start/End: Original strand, 10343597 - 10343665
Alignment:
Q  323 gtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||||||||||||||||||||||   ||||||| ||||||||||||||||||||||||||||||||    
T  10343597 gtgtcagatttttgtgtgggtgtcaagatgtgtatttccacctaagggtgtctatgtatcattactctt 10343665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 295 - 391
Target Start/End: Complemental strand, 36208267 - 36208171
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||||||| |||||||| ||||  | |||||| |||||||||||||||||| |  |||||| ||||||||||||||||||||||||| ||||||    
T  36208267 tgtgcttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgtattaccacctaagggtgtctatgtatcataactctt 36208171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 40846124 - 40846213
Alignment:
Q  300 ttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||| || ||| | ||| |||||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| ||||    
T  40846124 ttgtgcggggtccatataactacatgttagatttttgtgtggatgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 40846213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 205 - 265
Target Start/End: Complemental strand, 36362198 - 36362138
Alignment:
Q  205 aagagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||    
T  36362198 aagagtaatgatacatagacaccctttattctcatacacccttgtacatcccatgtattag 36362138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 340 - 391
Target Start/End: Complemental strand, 11044237 - 11044186
Alignment:
Q  340 gggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11044237 gggtgtcaaaggatgtattgccacctaagggtgtctatgtatcattactctt 11044186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 203 - 265
Target Start/End: Complemental strand, 38837403 - 38837341
Alignment:
Q  203 gaaagagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||||||| ||||||||||||||||  |||||||||||||||||| ||||||||||    
T  38837403 gaaagagtaatgatacatagacaccctttatttccatacacccttgtacatcccatgcattag 38837341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 322 - 391
Target Start/End: Complemental strand, 18207247 - 18207178
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||| |||||||||| ||||||||||  ||||||||||||||||||| |||||||||||||| ||||||    
T  18207247 cgtgttagatttttgtatgggtgtcaagaggtgtattgccacctaaggttgtctatgtatcataactctt 18207178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 19330027 - 19329966
Alignment:
Q  204 aaagagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||| | ||||||||||    
T  19330027 aaagagtaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 19329966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 324 - 389
Target Start/End: Original strand, 32564461 - 32564526
Alignment:
Q  324 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  ||| |||||||||| ||||    
T  32564461 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagaatgtttatgtatcataactc 32564526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 297 - 390
Target Start/End: Original strand, 46033809 - 46033902
Alignment:
Q  297 tgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    ||||||||||| || ||  ||||  |||||||||||||| ||||||||| ||||||||||||||||||||||  | |||||||||||| |||||    
T  46033809 tgcttgtgcggagttcatgtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaagaatatctatgtatcataactct 46033902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 299 - 391
Target Start/End: Complemental strand, 7727996 - 7727904
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||||||||||| |||||  | |||||||||||| ||||  ||||||  |||||||| |||||||||||||| |||||||||| ||||||    
T  7727996 cttgtgcggggtccatatgaccacatgtcagatttttatgtgaatgtcaagaggtgtattaccacctaagggtgtttatgtatcataactctt 7727904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 298 - 390
Target Start/End: Complemental strand, 26296735 - 26296643
Alignment:
Q  298 gcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    |||||||||||||||| ||| |  ||| |||||||||| ||||| ||| ||||||| ||||| ||||||||| |||||||||||||| |||||    
T  26296735 gcttgtgcggggtccatatggccacgtatcagatttttatgtggatgttaaagggtatattgtcacctaaggatgtctatgtatcataactct 26296643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 4999431 - 4999490
Alignment:
Q  206 agagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||| | ||||||||||    
T  4999431 agagtaatgatacatagacaccttttattctcatacacccttgtacaccccatgcattag 4999490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 328 - 391
Target Start/End: Original strand, 35468894 - 35468957
Alignment:
Q  328 agatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||| ||||||||||||| | |||||||||| |||||| |||||||||||||||||||||    
T  35468894 agatttttatgtgggtgtcaaatgatgtattgccatctaaggatgtctatgtatcattactctt 35468957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 206 - 253
Target Start/End: Original strand, 36361842 - 36361889
Alignment:
Q  206 agagtaatgatatatagacaccctttattctcatacacccttgtacat 253  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||    
T  36361842 agagtaatgatacatagacaccctttattctcatacacccttgtacat 36361889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 322 - 389
Target Start/End: Original strand, 39255956 - 39256023
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||||| ||||| ||||  ||||||||||||||||||| |||||||||||||| ||||    
T  39255956 cgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaaggttgtctatgtatcataactc 39256023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 31735940 - 31735884
Alignment:
Q  333 tttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    ||||||||||||| |||| |||||||||||||||||| |||||||||||||| ||||    
T  31735940 tttgtgtgggtgttaaagagtgtattgccacctaaggatgtctatgtatcataactc 31735884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 205 - 265
Target Start/End: Complemental strand, 40957891 - 40957831
Alignment:
Q  205 aagagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||||| |||||||||| ||||| ||||||||||||||||| | ||||||||||    
T  40957891 aagagtaatgatacatagacacccattattttcatacacccttgtacaccccatgcattag 40957831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 206 - 261
Target Start/End: Original strand, 8080300 - 8080355
Alignment:
Q  206 agagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgca 261  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||| | ||||||    
T  8080300 agagtaatgatacatagacaccctttattcccatacacccttgtacaccccatgca 8080355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 11044361 - 11044302
Alignment:
Q  206 agagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||||| |||||||| ||||||| ||||||||| ||||||| ||||||||||||    
T  11044361 agagtaatgatacatagacactctttattttcatacacctttgtacacctcatgcattag 11044302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 32951410 - 32951469
Alignment:
Q  206 agagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| | |||| |||||    
T  32951410 agagtaatgatacatagacaccccttattctcatacacccttgtacaccccatgtattag 32951469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 207 - 265
Target Start/End: Complemental strand, 3434734 - 3434676
Alignment:
Q  207 gagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||||| | ||||||||||    
T  3434734 gagtaatgatacatagacaccctttattcccatacagccttgtacaccccatgcattag 3434676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 35137716 - 35137657
Alignment:
Q  206 agagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||||  ||||| ||| ||| |||||||||||||||||||||| ||||||||||    
T  35137716 agagtaatgatccatagataccatttgttctcatacacccttgtacatcccatgcattag 35137657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 19436117 - 19436163
Alignment:
Q  219 atagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||| |||||||||||||||||||||||| | ||||||||||    
T  19436117 atagacaccatttattctcatacacccttgtacaccccatgcattag 19436163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 391
Target Start/End: Complemental strand, 45223109 - 45223040
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||||||||||| | |||  |||  ||||||||||||||||| ||| ||| |||||||||||||    
T  45223109 cgtgtcagatttttgtgtagatgttcaagaatgtattgccacctaaggatgtatatatatcattactctt 45223040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 325 - 384
Target Start/End: Original strand, 2318279 - 2318338
Alignment:
Q  325 gtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 384  Q
    ||||||||||||||||||||||||  ||||| |||||||||| || |||  |||||||||    
T  2318279 gtcagatttttgtgtgggtgtcaagaggtgtcttgccacctatggttgttaatgtatcat 2318338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 219 - 253
Target Start/End: Original strand, 39255854 - 39255888
Alignment:
Q  219 atagacaccctttattctcatacacccttgtacat 253  Q
    |||||||||||||||| ||||||||||||||||||    
T  39255854 atagacaccctttattatcatacacccttgtacat 39255888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 46033731 - 46033777
Alignment:
Q  219 atagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||| |||||||||||||||||||||||| | ||| ||||||    
T  46033731 atagacaccatttattctcatacacccttgtacaccccatacattag 46033777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 246
Target Start/End: Complemental strand, 7389572 - 7389531
Alignment:
Q  205 aagagtaatgatatatagacaccctttattctcatacaccct 246  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||    
T  7389572 aagagtaatgatacatagacatcctttattcccatacaccct 7389531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 16374754 - 16374787
Alignment:
Q  219 atagacaccctttattctcatacacccttgtaca 252  Q
    |||||||||||||||||||||||||| |||||||    
T  16374754 atagacaccctttattctcatacacctttgtaca 16374787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 363
Target Start/End: Complemental strand, 32029791 - 32029751
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 363  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  32029791 cgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 32029751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 324 - 389
Target Start/End: Complemental strand, 41423747 - 41423682
Alignment:
Q  324 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    ||||||||||||||||  |||||||  |||||||| ||| |||| | |||||||||||||| ||||    
T  41423747 tgtcagatttttgtgtaagtgtcaagaggtgtattaccatctaatgatgtctatgtatcataactc 41423682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 4e-40; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 295 - 391
Target Start/End: Original strand, 48183055 - 48183151
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  48183055 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagggtgtctatgtatcattactctt 48183151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 295 - 391
Target Start/End: Original strand, 50052434 - 50052530
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50052434 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactctt 50052530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 11511468 - 11511562
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11511468 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 11511562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 295 - 391
Target Start/End: Original strand, 480453 - 480549
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  480453 tgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcattactctt 480549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 6034138 - 6034044
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||| ||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6034138 tgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 6034044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 41236441 - 41236347
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  41236441 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 41236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 295 - 391
Target Start/End: Original strand, 42044373 - 42044469
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||    
T  42044373 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccacctaagggtgtctatgtatcattactctt 42044469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 54473539 - 54473633
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  54473539 tgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtcacctaagggtgtctatgtatcattactc 54473633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 295 - 391
Target Start/End: Complemental strand, 29239980 - 29239884
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||| ||||||||| ||||| ||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  29239980 tgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattactctt 29239884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 29234251 - 29234346
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    |||||||||||||||||||| ||||| |||||||||||||||||  ||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  29234251 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaaagggtgtattgccatctaagggtgtctatgtatcattactct 29234346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 3481748 - 3481654
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||| ||||||||| |||||  |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  3481748 tgtgcttgtgtggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaggtgtctatgtatcattactc 3481654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 295 - 392
Target Start/End: Original strand, 24995113 - 24995210
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttc 392  Q
    |||||||||||||||||||| ||||| ||||||| |||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||||||||    
T  24995113 tgtgcttgtgcggggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaagggtgtccatatatcattactcttc 24995210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 296 - 389
Target Start/End: Original strand, 50526178 - 50526271
Alignment:
Q  296 gtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    ||||||||||||  ||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  50526178 gtgcttgtgcggaatccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactc 50526271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 295 - 391
Target Start/End: Complemental strand, 23608329 - 23608233
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||| || || ||| ||||| |||||||||||||||||||||||||||| ||||||||| || |||||||||||||| |||||||||||||    
T  23608329 tgtgcttgtgtggagttcacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgtcatctaagggtgtctatatatcattactctt 23608233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 295 - 391
Target Start/End: Complemental strand, 29977979 - 29977883
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||| |||||||| |||||| |||||||||||||||||||||||| || ||||||||||||||||| || | | |||||||||||||||||    
T  29977979 tgtgcttgtgtggggtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatggttctgtatgtatcattactctt 29977883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 31910286 - 31910192
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||||||||  || ||  |||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||| ||||    
T  31910286 tgtgcttgtgcggggtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaaggatgtctatgtatcataactc 31910192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 299 - 400
Target Start/End: Original strand, 19670726 - 19670827
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttctgaaaa 398  Q
    ||||||||||||||| ||| |  | ||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||| |||||| | ||||    
T  19670726 cttgtgcggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactcttttcaaaa 19670825  T
Q  399 ac 400  Q
    ||    
T  19670826 ac 19670827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 321 - 389
Target Start/End: Complemental strand, 40574847 - 40574779
Alignment:
Q  321 gcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||    
T  40574847 gcgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcataactc 40574779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 324 - 391
Target Start/End: Complemental strand, 55475256 - 55475189
Alignment:
Q  324 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||    
T  55475256 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtttatgtatcataactctt 55475189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 299 - 390
Target Start/End: Complemental strand, 47986298 - 47986207
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    ||||||||||||||| ||| |  | |||||||||||||||||| |||||| || ||||||||||||||||||||| |||||||||| |||||    
T  47986298 cttgtgcggggtccatatggccacatgtcagatttttgtgtggatgtcaagggatgtattgccacctaagggtgtttatgtatcataactct 47986207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 299 - 390
Target Start/End: Original strand, 50813902 - 50813993
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    |||||||||||| || |||||  | ||||||||||||||||||||||||| ||||||||| ||||||||| |||| |||||||||| |||||    
T  50813902 cttgtgcggggttcatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattaccacctaagagtgtttatgtatcataactct 50813993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 297 - 384
Target Start/End: Original strand, 53352574 - 53352660
Alignment:
Q  297 tgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 384  Q
    |||||||||||||||||| | ||| |||||||||||||||||| ||||| ||||  ||||||| ||||||||||||||||||||||||    
T  53352574 tgcttgtgcggggtccacttaactacgtgtcagatttttgtgtaggtgttaaagaatgtattg-cacctaagggtgtctatgtatcat 53352660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 299 - 392
Target Start/End: Complemental strand, 32767048 - 32766955
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttc 392  Q
    ||||||| ||||||| ||| |  | |||||||||||||| |||||||||| ||||||||||||||||||| |||| |||||||||| |||||||    
T  32767048 cttgtgcagggtccatatggccacatgtcagatttttgtatgggtgtcaaggggtgtattgccacctaagagtgtttatgtatcataactcttc 32766955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 299 - 371
Target Start/End: Original strand, 17983753 - 17983825
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggt 371  Q
    ||||||||||||||| ||| |  | ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  17983753 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggt 17983825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 324 - 391
Target Start/End: Original strand, 29547994 - 29548061
Alignment:
Q  324 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||||||||||||||||||||| || ||||||||||||||||| ||| |||||||||| ||||||    
T  29547994 tgtcagatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactctt 29548061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 42044282 - 42044343
Alignment:
Q  204 aaagagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||||| ||||||||||    
T  42044282 aaagagtaatgatacatagacaccctttatttccatacacccttgtacatcccatgcattag 42044343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 207 - 264
Target Start/End: Original strand, 48182967 - 48183024
Alignment:
Q  207 gagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcatta 264  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||    
T  48182967 gagtaatgatacatagacaccctttattctcatacacccttgtacaccccatgcatta 48183024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 324 - 389
Target Start/End: Original strand, 55079749 - 55079814
Alignment:
Q  324 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||| ||||||||||  ||||||||||||||||||||||| |||||||||| ||||    
T  55079749 tgtcagatttttgtatgggtgtcaagaggtgtattgccacctaagggtgtttatgtatcataactc 55079814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 28480274 - 28480369
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    |||| ||||| ||||||||||||||| | ||||||||||||||||| |||| ||   |||||||| ||||||||| ||||||||||| || |||||    
T  28480274 tgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataactct 28480369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 28481149 - 28481244
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    |||| ||||| ||||||||||||||| | ||||||||||||||||| |||| ||   |||||||| ||||||||| ||||||||||| || |||||    
T  28481149 tgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataactct 28481244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 28482024 - 28482119
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    |||| ||||| ||||||||||||||| | ||||||||||||||||| |||| ||   |||||||| ||||||||| ||||||||||| || |||||    
T  28482024 tgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataactct 28482119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 41236530 - 41236471
Alignment:
Q  206 agagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||| | ||||||||||    
T  41236530 agagtaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 41236471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 207 - 265
Target Start/End: Complemental strand, 6034226 - 6034168
Alignment:
Q  207 gagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||| | ||||||||||    
T  6034226 gagtaatgatacatagacaccttttattctcatacacccttgtacaccccatgcattag 6034168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 303 - 389
Target Start/End: Original strand, 8343177 - 8343263
Alignment:
Q  303 tgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    ||||||||||| ||| |  | |||||||||||| ||| ||||||||||| ||||||||||||||||| ||| |||||||||| ||||    
T  8343177 tgcggggtccatatggccacatgtcagatttttatgtaggtgtcaaaggatgtattgccacctaaggatgtttatgtatcataactc 8343263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 295 - 351
Target Start/End: Complemental strand, 41823976 - 41823920
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagg 351  Q
    |||||||||||||||||||  ||||| |||||||||||||||||||||||| |||||    
T  41823976 tgtgcttgtgcggggtccatgtgactacgtgtcagatttttgtgtgggtgttaaagg 41823920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 206 - 264
Target Start/End: Original strand, 24995024 - 24995082
Alignment:
Q  206 agagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcatta 264  Q
    |||||||||||| ||||||||||||||||| |||||||| ||||||| | |||||||||    
T  24995024 agagtaatgatacatagacaccctttattcccatacaccattgtacaccccatgcatta 24995082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 324 - 390
Target Start/End: Original strand, 44536781 - 44536846
Alignment:
Q  324 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    |||||||||||||||||| |||||| ||||||||||||||||||  |||| |||||||||| |||||    
T  44536781 tgtcagatttttgtgtggatgtcaa-gggtgtattgccacctaaaagtgtttatgtatcataactct 44536846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 324 - 389
Target Start/End: Original strand, 18924530 - 18924595
Alignment:
Q  324 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||||||| | |||| |||||||||||||||||||||| | |||| ||||| ||||    
T  18924530 tgtcagatttttgtgtggatatcaaggggtgtattgccacctaagggtatttatggatcataactc 18924595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 322 - 391
Target Start/End: Complemental strand, 47104611 - 47104542
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||| |||||||||||||||||| || |||||||| || |||||  ||||||| |||||||||||||    
T  47104611 cgtgtcaaatttttgtgtgggtgtcagagagtgtattgtcatctaagaatgtctatatatcattactctt 47104542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 53352492 - 53352537
Alignment:
Q  207 gagtaatgatatatagacaccctttattctcatacacccttgtaca 252  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||    
T  53352492 gagtaatgatacatagacaccctttattttcatacacccttgtaca 53352537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 265
Target Start/End: Complemental strand, 23608419 - 23608359
Alignment:
Q  205 aagagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||||| ||||||| ||||||||| |||||| || |||||| ||||||||||||    
T  23608419 aagagtaatgatacatagacatcctttattcccatacatccctgtacacctcatgcattag 23608359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 295 - 391
Target Start/End: Original strand, 48647732 - 48647828
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||||||||| |||||| ||||  ||||| |||||||| ||||||||| ||  |||||||||  |||||||| ||| ||||| |||| ||||||    
T  48647732 tgtgcttgtgcggagtccacgtgaccacgtgttagatttttatgtgggtgttaagaggtgtattgttacctaaggatgtttatgtgtcataactctt 48647828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 326 - 381
Target Start/End: Original strand, 29589777 - 29589831
Alignment:
Q  326 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtat 381  Q
    ||||||||||||||||||||||| |||||||||| || |||||||||| |||||||    
T  29589777 tcagatttttgtgtgggtgtcaaggggtgtattg-caactaagggtgtttatgtat 29589831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 41824052 - 41824006
Alignment:
Q  219 atagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||| |||||||||||||||| ||||||| ||||||||||||    
T  41824052 atagacaccatttattctcatacacctttgtacacctcatgcattag 41824006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 300 - 384
Target Start/End: Complemental strand, 18769198 - 18769114
Alignment:
Q  300 ttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 384  Q
    ||||| |||||  |||||||  |||||||||||||||||||||||| | ||||||||| |  || ||||| ||| ||||||||||    
T  18769198 ttgtgtggggtttacatgaccacgtgtcagatttttgtgtgggtgttagagggtgtatgggtacataaggatgtttatgtatcat 18769114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 206 - 264
Target Start/End: Original strand, 11511380 - 11511437
Alignment:
Q  206 agagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcatta 264  Q
    |||||||||||| ||||||||  ||||||  |||||||||||||||| |||||||||||    
T  11511380 agagtaatgatacatagacaca-tttatttccatacacccttgtacacctcatgcatta 11511437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 40574949 - 40574916
Alignment:
Q  219 atagacaccctttattctcatacacccttgtaca 252  Q
    ||||||||| ||||||||||||||||||||||||    
T  40574949 atagacaccttttattctcatacacccttgtaca 40574916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 6e-39; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 504127 - 504221
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  504127 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 504221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 12831141 - 12831047
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  12831141 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 15197427 - 15197333
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15197427 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactc 15197333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 40423949 - 40424043
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  40423949 tgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtatctatgtatcattactc 40424043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 295 - 391
Target Start/End: Complemental strand, 14548016 - 14547920
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  14548016 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagggtgtctatgtatctttactctt 14547920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 1179946 - 1180040
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1179946 tgtgcttgtgcggaatccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 1180040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 37038573 - 37038478
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  37038573 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactct 37038478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 23122603 - 23122697
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    ||||||| |||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  23122603 tgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatgtatcattactc 23122697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 34012302 - 34012396
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||| ||||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34012302 tgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 34012396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 295 - 388
Target Start/End: Complemental strand, 5957924 - 5957831
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 388  Q
    |||| ||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  5957924 tgtgattgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagaatgtctatgtatcattact 5957831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 297 - 390
Target Start/End: Original strand, 44507095 - 44507188
Alignment:
Q  297 tgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    ||||||| |||||||||| ||||| |||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||    
T  44507095 tgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagggtgtctatgtatcattactct 44507188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 295 - 391
Target Start/End: Original strand, 10284637 - 10284733
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||||| ||| |||||||||||||||||||| ||||||    
T  10284637 tgtgcttgtgcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagggtgtctatgtatcataactctt 10284733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 15048188 - 15048281
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||||||||  || || |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||    
T  15048188 tgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgg-tgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 15048281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 299 - 391
Target Start/End: Complemental strand, 16383467 - 16383375
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||||||||||| ||| |  | ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||    
T  16383467 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactctt 16383375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 295 - 370
Target Start/End: Original strand, 8841438 - 8841513
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggg 370  Q
    |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  8841438 tgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaaggg 8841513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 299 - 393
Target Start/End: Complemental strand, 34307306 - 34307212
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttct 393  Q
    |||||||||||| || ||| |  | ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||    
T  34307306 cttgtgcggggttcatatgtccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactcttct 34307212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 295 - 384
Target Start/End: Original strand, 10621093 - 10621182
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 384  Q
    |||||||||||||| || |  || || ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  10621093 tgtgcttgtgcgggatcgatgtggctacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcat 10621182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 43414587 - 43414681
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||| ||||  ||||  ||||| |||||||||||||||||||||||||||| |||||| |||||| |||||||||||||| ||||    
T  43414587 tgtgcttgtgcgggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaaggatgtctatgtatcataactc 43414681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 299 - 391
Target Start/End: Original strand, 24307803 - 24307895
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||||||||||| ||| |  | | ||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||| ||||||    
T  24307803 cttgtgcggggtccatatggccacatatcagatttttgtgtgggtgtcaagggatgtattgccacctaagggtgtttatgtatcataactctt 24307895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 322 - 389
Target Start/End: Original strand, 20074967 - 20075034
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    ||||||| |||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  20074967 cgtgtcacatttttatgtgggtgtcaaagagtgtattgccacctaaggatgtctatgtatcattactc 20075034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 326 - 391
Target Start/End: Original strand, 4854900 - 4854965
Alignment:
Q  326 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||| ||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  4854900 tcagatttttatgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcattactctt 4854965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 326 - 391
Target Start/End: Complemental strand, 24307692 - 24307627
Alignment:
Q  326 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||| ||||||    
T  24307692 tcagatttttgtgtgggtgtcaatggatgtattgccacctaagggtgtttatgtatcataactctt 24307627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 324 - 389
Target Start/End: Original strand, 30479509 - 30479574
Alignment:
Q  324 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||| ||||    
T  30479509 tgtcagatttttatgtggatgtcaaagggtgtattgccacctaagggtgtttatgtatcataactc 30479574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 295 - 392
Target Start/End: Complemental strand, 42221609 - 42221512
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttc 392  Q
    |||||||||  |||||||| |||| | ||||||||||||||||||||||||| | |  ||||||| ||||||||| ||| ||||||||||||||||||    
T  42221609 tgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatgtattgtcacctaaggatgtatatgtatcattactcttc 42221512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 207 - 265
Target Start/End: Original strand, 504039 - 504097
Alignment:
Q  207 gagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||    
T  504039 gagtaatgatacatagacaccctttattctcatacacccttgtacaccccatgcattag 504097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 300 - 390
Target Start/End: Complemental strand, 17443914 - 17443824
Alignment:
Q  300 ttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    ||||| ||||||||||||||| | ||||||||||||||||| |||| ||   |||||||| ||||||||| |||||||||||||| |||||    
T  17443914 ttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtatcataactct 17443824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 207 - 265
Target Start/End: Original strand, 23122515 - 23122573
Alignment:
Q  207 gagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||    
T  23122515 gagtaatgatacatagacaccctttattctcatacacccttgtacaccccatgcattag 23122573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 34012211 - 34012272
Alignment:
Q  204 aaagagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||| | ||||||||||    
T  34012211 aaagagtaatgatacatagacaccctttattctcgtacacccttgtacaccccatgcattag 34012272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 299 - 391
Target Start/End: Original strand, 16056411 - 16056503
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||||||||||| ||| |  | ||||||||||||||||||||||||| || ||||||| ||| ||||| ||| |||||||||| ||||||    
T  16056411 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataaggatgtttatgtatcataactctt 16056503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 306 - 389
Target Start/End: Original strand, 14055609 - 14055692
Alignment:
Q  306 ggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    ||||||||| ||||| | ||| |||||||||||||| |||||| | |||||||| |||||||||||||| ||||||||| ||||    
T  14055609 ggggtccacgtgactacatgtaagatttttgtgtggatgtcaaggagtgtattgtcacctaagggtgtcaatgtatcataactc 14055692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 295 - 388
Target Start/End: Complemental strand, 9122279 - 9122196
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 388  Q
    |||||||||||||| ||||| ||||| | ||||||||||||||||||||||          |||||||||||||||||||||||||||||||||    
T  9122279 tgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgt----------attgccacctaagggtgtctatgtatcattact 9122196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 207 - 265
Target Start/End: Complemental strand, 12831229 - 12831171
Alignment:
Q  207 gagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||| | ||||||||||    
T  12831229 gagtaatgatacatagacaccatttattctcatacacccttgtacaccccatgcattag 12831171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 324 - 390
Target Start/End: Complemental strand, 32032789 - 32032724
Alignment:
Q  324 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||| |||||||||| |||||    
T  32032789 tgtcagatttttgtgtggatgtcaa-ggatgtattgccacctaagggtgtttatgtatcataactct 32032724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 14548107 - 14548046
Alignment:
Q  204 aaagagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||||||| ||||||||||||||||| |||||| ||||||||| | ||||||||||    
T  14548107 aaagagtaatgatacatagacaccctttattcccatacatccttgtacaccccatgcattag 14548046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 295 - 391
Target Start/End: Original strand, 15258935 - 15259031
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||||||| |||||||| ||||  | |||||||||||| ||||| |||| | || |||||||||| ||||| || |||||||||||| ||||||    
T  15258935 tgtgcttgtgcagggtccacgtgaccacatgtcagatttttatgtggatgtccagggatgtattgccatctaagagtatctatgtatcataactctt 15259031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 15197515 - 15197459
Alignment:
Q  207 gagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcatt 263  Q
    ||||||||||| ||||||||  ||||||| |||||||||||||||| ||||||||||    
T  15197515 gagtaatgatacatagacactttttattcccatacacccttgtacacctcatgcatt 15197459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 265
Target Start/End: Original strand, 42710210 - 42710270
Alignment:
Q  205 aagagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||||| | ||||||||||||||| |||||||||||||||| | ||| ||||||    
T  42710210 aagagtaatgatacacagacaccctttattcccatacacccttgtacaccccatacattag 42710270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 223 - 261
Target Start/End: Complemental strand, 5957996 - 5957958
Alignment:
Q  223 acaccctttattctcatacacccttgtacatctcatgca 261  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  5957996 acaccctttattctcatacacccttgtacacctcatgca 5957958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 211 - 265
Target Start/End: Original strand, 15048103 - 15048157
Alignment:
Q  211 aatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||| ||||||||||||||||||||  ||||||||||||||||| ||| ||||||    
T  15048103 aatgttatatagacaccctttattccgatacacccttgtacatcccatacattag 15048157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 211 - 265
Target Start/End: Original strand, 40423865 - 40423919
Alignment:
Q  211 aatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||| ||||||||| ||||||| |||||||||||||||| |||||| |||||    
T  40423865 aatgatacatagacaccttttattcccatacacccttgtacacctcatgtattag 40423919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 207 - 265
Target Start/End: Original strand, 1179858 - 1179916
Alignment:
Q  207 gagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||| ||||||| ||||||||| |||| | ||||||||| | ||||||||||    
T  1179858 gagtaatgatagatagacatcctttattcccatatatccttgtacaccccatgcattag 1179916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 4854793 - 4854839
Alignment:
Q  219 atagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||| ||||||||||||| ||||||||||||| ||| ||||||    
T  4854793 atagacactctttattctcatatacccttgtacatcccatacattag 4854839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 207 - 265
Target Start/End: Complemental strand, 9122367 - 9122309
Alignment:
Q  207 gagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||| |||||||  |||||||| ||||||| |||||||| | ||||||||||    
T  9122367 gagtaatgatacatagacattctttattcccatacactcttgtacaccccatgcattag 9122309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 207 - 265
Target Start/End: Original strand, 44507006 - 44507063
Alignment:
Q  207 gagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||| |||||||   |||||||||||||||||||||||| | ||||||||||    
T  44507006 gagtaatgatacatagacata-tttattctcatacacccttgtacaccccatgcattag 44507063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 363
Target Start/End: Original strand, 2547122 - 2547162
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 363  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  2547122 cgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 2547162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 363
Target Start/End: Original strand, 29705488 - 29705528
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 363  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  29705488 cgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 29705528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 324 - 389
Target Start/End: Complemental strand, 38229493 - 38229429
Alignment:
Q  324 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    ||||||||||||||||||||||| | | | ||||||||||||||| ||||  ||||||||| ||||    
T  38229493 tgtcagatttttgtgtgggtgtc-aggagcgtattgccacctaagagtgttcatgtatcataactc 38229429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 6e-39; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 32869772 - 32869678
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  32869772 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatctttactc 32869678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 295 - 386
Target Start/End: Original strand, 22880664 - 22880755
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 386  Q
    |||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22880664 tgtgcttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 22880755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 17598648 - 17598554
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||||||||| ||||  |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  17598648 tgtgcttgtgcggggtccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcattactc 17598554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 11427712 - 11427615
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta--agggtgtctatgtatcattactct 390  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||    
T  11427712 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagagggtgtctatgtatcattactct 11427615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 295 - 391
Target Start/End: Original strand, 6209471 - 6209567
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||| ||||||||||||| ||||| |||| |||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  6209471 tgtgctagtgcggggtccacgtgactacgtgacagatttttgtgtgagtgtcaaatagtgtattgccacctaagggtgtctatgtatcattactctt 6209567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 303 - 389
Target Start/End: Original strand, 31109414 - 31109500
Alignment:
Q  303 tgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    ||||||||| || ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||    
T  31109414 tgcggggtctacgtgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctattaatcattactc 31109500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 299 - 391
Target Start/End: Original strand, 15990052 - 15990144
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||||||||||| ||| |  | ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||    
T  15990052 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactctt 15990144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 299 - 391
Target Start/End: Original strand, 30341370 - 30341462
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||||||||||| ||| |  | ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||    
T  30341370 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactctt 30341462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 28536494 - 28536582
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 385  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||||||||||| || ||||||||||||||||| ||| |||||||||||    
T  28536494 tgtgcttgtgtggggtccacatgac--cgtgtcagatttttgtgtgggtgtcaagggttgtattgccacctaaggatgtttatgtatcatt 28536582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 31976342 - 31976247
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    |||||||||||||||| ||  ||||  |||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||| |||||    
T  31976342 tgtgcttgtgcggggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaaggatgtctatgtatcataactct 31976247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 299 - 389
Target Start/End: Original strand, 15508034 - 15508124
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    ||||||||||||||| ||| |  | ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||    
T  15508034 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 15508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 29857921 - 29857827
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    ||||||| |||||| ||||| | ||| |||||||||||||||||||||||| ||| |||||||||||| |||| |||||||||||||||||||||    
T  29857921 tgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattactc 29857827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 300 - 398
Target Start/End: Complemental strand, 15832666 - 15832568
Alignment:
Q  300 ttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttctgaaaa 398  Q
    |||||| || ||||| ||||| ||||||| |||||||||||||||||||| | | ||||| ||||||| ||||||||||||||||||||||| ||||||    
T  15832666 ttgtgcaggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaatgatttattgtcacctaaaggtgtctatgtatcattactcttttgaaaa 15832568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 295 - 391
Target Start/End: Original strand, 23128133 - 23128229
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    |||||||||| ||| ||||| ||||| |||||||||||||||||||||||||||||| ||||||  ||| ||| ||||||||| |||||||| ||||    
T  23128133 tgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattatcacataaaggtgtctatatatcattattctt 23128229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 31953036 - 31953130
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||| ||||| | |||||||||||   | |||||||||||| |||||||||||| |||||||||||||||||||| ||||||| |||||||||||    
T  31953036 tgtgtttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatctatcattactc 31953130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 295 - 391
Target Start/End: Original strand, 31110767 - 31110861
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||||||| |||||||  ||  | ||||||||||||||||| |  ||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  31110767 tgtgcttgtgcagggtccatgtggttacgtgtcagatttttgtgag--tgtcaaagggtgtattgccacctaaggatgtctatgtatcataactctt 31110861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 11427801 - 11427742
Alignment:
Q  206 agagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||    
T  11427801 agagtaatgatacatagacaccctttattctcatacacccttgtacaccccatgcattag 11427742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 299 - 389
Target Start/End: Complemental strand, 4231638 - 4231548
Alignment:
Q  299 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    ||||||||||||||| ||| |  ||||||||||||||||||||||| ||| |||||||||||||||||| | ||| |||| ||||| ||||    
T  4231638 cttgtgcggggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccacctaatgatgtttatgaatcataactc 4231548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 323 - 388
Target Start/End: Complemental strand, 946442 - 946377
Alignment:
Q  323 gtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 388  Q
    |||||||||||||| || ||||||||||||||||||  ||||||||| |||||||||||| |||||    
T  946442 gtgtcagatttttgggtaggtgtcaaagggtgtattatcacctaaggatgtctatgtatcgttact 946377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 322 - 391
Target Start/End: Complemental strand, 12732549 - 12732480
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||||||||||||||||||||||| |  | ||||||||| ||||  |||||||||||||||||||||    
T  12732549 cgtgtcagatttttgtgtgggtgtcaatgattatattgccacttaagaatgtctatgtatcattactctt 12732480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 29858012 - 29857951
Alignment:
Q  204 aaagagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||||||| ||||||||| ||||||| |||||||||||||||| | ||||||||||    
T  29858012 aaagagtaatgatacatagacaccatttattcccatacacccttgtacaccccatgcattag 29857951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 32869863 - 32869802
Alignment:
Q  204 aaagagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||||||| ||||||||||||||||| |||||| ||||||||| | ||||||||||    
T  32869863 aaagagtaatgatacatagacaccctttattcccatacatccttgtacaccccatgcattag 32869802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 17598739 - 17598678
Alignment:
Q  204 aaagagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||||||| ||||||||| ||||||  |||||||||||||||| | ||||||||||    
T  17598739 aaagagtaatgatacatagacaccttttatttccatacacccttgtacaccccatgcattag 17598678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 322 - 384
Target Start/End: Original strand, 9379745 - 9379807
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 384  Q
    ||||||| |||||||| |||||||||| || ||||||| || |||||| ||||||||||||||    
T  9379745 cgtgtcaaatttttgtatgggtgtcaagggatgtattgtcatctaaggatgtctatgtatcat 9379807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 324 - 390
Target Start/End: Original strand, 22422053 - 22422119
Alignment:
Q  324 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 390  Q
    ||||||| |||||| || |||||||  | | ||||||||||||||| ||||||||||||||||||||    
T  22422053 tgtcagaattttgtatgagtgtcaagagatctattgccacctaaggatgtctatgtatcattactct 22422119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 205 - 265
Target Start/End: Original strand, 22880574 - 22880634
Alignment:
Q  205 aagagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||||| ||| ||||| ||||||| |||||||||||||||| | |||| |||||    
T  22880574 aagagtaatgatacatatacaccatttattcccatacacccttgtacaccccatgtattag 22880634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 15832756 - 15832701
Alignment:
Q  210 taatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||  ||||||||||||||||  ||||||||||||||| | ||||||||||    
T  15832756 taatgatacgtagacaccctttattccaatacacccttgtacaccccatgcattag 15832701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 31976418 - 31976372
Alignment:
Q  219 atagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||| |||||||||||||||||||||||| | ||| ||||||    
T  31976418 atagacaccatttattctcatacacccttgtacaccccatacattag 31976372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 946557 - 946500
Alignment:
Q  208 agtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||| || |||||  |||||| |||||||  |||||||||||||||||||||    
T  946557 agtaatgatacattgacactttttattgtcatacattcttgtacatctcatgcattag 946500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 363
Target Start/End: Original strand, 7367675 - 7367715
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 363  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  7367675 cgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 7367715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 391
Target Start/End: Complemental strand, 9698307 - 9698239
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 391  Q
    ||||||||| |||||| ||||||| ||||||||||||||||| | |||  ||  ||||||||||||||||    
T  9698307 cgtgtcagaattttgtatgggtgt-aaagggtgtattgccacatgaggtggtacatgtatcattactctt 9698239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 22422009 - 22422042
Alignment:
Q  219 atagacaccctttattctcatacacccttgtaca 252  Q
    ||||||||| ||||||||||||||||||||||||    
T  22422009 atagacaccatttattctcatacacccttgtaca 22422042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 363
Target Start/End: Complemental strand, 26669983 - 26669943
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 363  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  26669983 cgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 26669943  T

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Target: scaffold0321 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 295 - 400
Target Start/End: Original strand, 10115 - 10220
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttctg 394  Q
    ||||||||| || ||||||| ||||| |||||||||||||| ||||| ||||||||| ||||||||||||||| |||||||||||||||| |||||| |     
T  10115 tgtgcttgtacgcggtccacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgccacctaaaggtgtctatgtatcataactcttttt 10214  T
Q  395 aaaaac 400  Q
    ||||||    
T  10215 aaaaac 10220  T

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Target: scaffold0321; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 205 - 265
Target Start/End: Original strand, 10025 - 10085
Alignment:
Q  205 aagagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    ||||||||||||| |||||||||| |||||  |||||||||||||||| |  |||||||||    
T  10025 aagagtaatgatacatagacacccattatttccatacacccttgtacaccctatgcattag 10085  T

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Target: scaffold1268 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 935 - 1029
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||| | ||| ||||| |||||||| ||||||||||| ||| ||||||||||||||||||||| | |||||||||||||||||||    
T  935 tgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcattactc 1029  T

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Target: scaffold1267 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 935 - 1029
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    |||||||||||||| | ||| ||||| |||||||| ||||||||||| ||| ||||||||||||||||||||| | |||||||||||||||||||    
T  935 tgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcattactc 1029  T

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Target: scaffold0237 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 4123 - 4029
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 389  Q
    ||||||| |||||| ||||| | ||| |||||||||||||||||||||||| ||| |||||||||||| |||| |||||||||||||||||||||    
T  4123 tgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattactc 4029  T

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Target: scaffold0237; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 4214 - 4153
Alignment:
Q  204 aaagagtaatgatatatagacaccctttattctcatacacccttgtacatctcatgcattag 265  Q
    |||||||||||||| ||||||||| ||||||| |||||||||||||||| | ||||||||||    
T  4214 aaagagtaatgatacatagacaccatttattcccatacacccttgtacaccccatgcattag 4153  T

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Target: scaffold0018 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 300 - 373
Target Start/End: Complemental strand, 152587 - 152514
Alignment:
Q  300 ttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgt 373  Q
    ||||||||| |||| |||||  | ||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  152587 ttgtgcgggatccatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacccaagggtgt 152514  T

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Target: scaffold0316 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 17148 - 17077
Alignment:
Q  295 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 366  Q
    |||||||||||||||||||  ||||  | |||||||||||||||||| |||| | || |||||||| |||||    
T  17148 tgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtcgagggatgtattgcaaccta 17077  T

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Target: scaffold0119 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 363
Target Start/End: Original strand, 811 - 851
Alignment:
Q  322 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 363  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  811 cgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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