View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1507-Insertion-30 (Length: 378)
Name: NF1507-Insertion-30
Description: NF1507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1507-Insertion-30 |
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Alignment Details
Target: chr2 (Bit Score: 342; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 8 - 377
Target Start/End: Original strand, 42805255 - 42805624
Alignment:
| Q |
8 |
ttgatgtcatcgtttggtttatagtatatttttaacttttcaaatttagttagtttttgaaattgtagtgatcgattagcttgatatctcacattaaaga |
107 |
Q |
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| T |
42805255 |
ttgatgtcatcgtttggtttatagtatatttttaacttttcaaatttagttagtttttgaaattgtagtgatcgattagtttgatatctcacattaaaga |
42805354 |
T |
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| Q |
108 |
gattaatcaattcttcaagattaatgaaaatgaaaatcaaaatacatttcacactagttttgcgggacactttaaaaactaagtatgcatgtgtttggtt |
207 |
Q |
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| T |
42805355 |
gattaatcaattcttcaagattaatgtaaatgaaaatgaaaatacatttcacactagttttgcgggacactttaaaaactaagtatgcatgtgtttggtt |
42805454 |
T |
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| Q |
208 |
ctacggttgtacaaataaattttaaaacaactgattaggtaaaatagattcttatcaaaagtatgttaagtaacaaattgtttgacaacttagttattta |
307 |
Q |
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| T |
42805455 |
ctacggttgtacaaataaattttaaaacaactgattaggtaaaatagattctgatcaaaagtatgttaagtaacaaattgtttgacaacttagtcattta |
42805554 |
T |
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| Q |
308 |
aagcaccttcaccacttaggctcgacactcaagagttgtgtttagtacccaatattttatgatccaaata |
377 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
42805555 |
aagcaccttcaccatttaggctcgacactcaagagttgtgtttaatacccaatattttatgatccaaata |
42805624 |
T |
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