View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15071_high_3 (Length: 311)
Name: NF15071_high_3
Description: NF15071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15071_high_3 |
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Alignment Details
Target: chr4 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 8 - 295
Target Start/End: Original strand, 4823090 - 4823377
Alignment:
| Q |
8 |
cgaataatatctcagaacctaagttttgtccataaagtctttgacaatgactatgaagtccaagttttaatatttctgggagcacggattttagaaacgg |
107 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
4823090 |
cgaaaaatatctcagaacctaagttttgtccataaagtctttgacaatgactatgaagtccaagttttgatatttctgggagcacggattttagaaacgg |
4823189 |
T |
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| Q |
108 |
caaatgttagtggcgagagtagagatcgaattgacattccttatgaactccgtcacctcagccacgaattcatatcccctctgcgaacacaattgagttt |
207 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
4823190 |
aaaatgttagtggcgatagtagagatcgaattgacattccttatgaactccgtcacctcagccacgaagtcatatcccctctgcgaacacaattgagttt |
4823289 |
T |
|
| Q |
208 |
gcatcagccgccccgctatgatacaatattaaggattgtgacatctcgttttaaagcactggttatatcatactatgtaccatgtaga |
295 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
4823290 |
gcatcagccgccccgctatgatacaatattaaggattgtgccatctcgttttaaagcactggttatatcatactatgtaccatataga |
4823377 |
T |
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