View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15073_high_11 (Length: 260)
Name: NF15073_high_11
Description: NF15073
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15073_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 46748804 - 46749057
Alignment:
| Q |
1 |
aactcaccgccctccgccgtctcttctccaaacccgatgtctccattgacgcttacatcatcccttctcaagacgctcatcagagcgagttcatcgctca |
100 |
Q |
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| T |
46748804 |
aactcaccgccctccgccgtctcttctccaaacccgatgtctccattgacgcttacatcatcccttctcaagacgctcatcagagcgagttcatcgctca |
46748903 |
T |
|
| Q |
101 |
atcttacgctagacgaaaatacatttctgcctttactggcagtaatggaaccgctgttgttaccaacgataaagccgctctctggactgatggtcgctat |
200 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46748904 |
atcttacgctagacgaaaatacatttctgcttttactggcagtaatggaaccgccgttgttaccaacgataaagccgctctctggactgatggtcgctat |
46749003 |
T |
|
| Q |
201 |
tttctccaggttcctttttcaaaacacagacacatagtttttaattcatctcac |
254 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
46749004 |
tttctccaggttcctttttcaaaacacagacacatagtttttaattcatttcac |
46749057 |
T |
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