View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15073_low_2 (Length: 591)

Name: NF15073_low_2
Description: NF15073
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15073_low_2
NF15073_low_2
[»] chr5 (30 HSPs)
chr5 (19-172)||(5005216-5005369)
chr5 (431-553)||(5004852-5004974)
chr5 (247-378)||(5005016-5005147)
chr5 (111-172)||(3518286-3518347)
chr5 (111-169)||(8761753-8761811)
chr5 (111-172)||(12612924-12612985)
chr5 (111-172)||(35358842-35358903)
chr5 (113-172)||(10469856-10469915)
chr5 (111-169)||(31625983-31626041)
chr5 (114-172)||(43152970-43153028)
chr5 (111-172)||(1108101-1108166)
chr5 (114-172)||(9940157-9940215)
chr5 (114-172)||(17574134-17574192)
chr5 (114-172)||(29765934-29765992)
chr5 (115-169)||(38919952-38920006)
chr5 (125-173)||(5043027-5043075)
chr5 (49-96)||(5017230-5017277)
chr5 (114-172)||(35616711-35616769)
chr5 (114-172)||(37821051-37821109)
chr5 (115-172)||(18729188-18729245)
chr5 (116-172)||(125195-125251)
chr5 (116-172)||(11306799-11306855)
chr5 (113-173)||(34698878-34698937)
chr5 (116-172)||(39595377-39595433)
chr5 (114-172)||(8442262-8442320)
chr5 (120-169)||(2863655-2863704)
chr5 (115-168)||(12203252-12203305)
chr5 (127-172)||(34381115-34381160)
chr5 (115-172)||(40201031-40201088)
chr5 (116-172)||(33567151-33567207)
[»] chr3 (48 HSPs)
chr3 (113-172)||(29533864-29533923)
chr3 (111-172)||(50025592-50025653)
chr3 (114-172)||(16295567-16295625)
chr3 (111-172)||(2280280-2280341)
chr3 (114-172)||(9557842-9557900)
chr3 (111-172)||(47140582-47140643)
chr3 (114-172)||(33971986-33972044)
chr3 (114-172)||(38471745-38471803)
chr3 (111-172)||(14847425-14847486)
chr3 (114-172)||(9027716-9027774)
chr3 (114-172)||(43149253-43149311)
chr3 (114-172)||(51385350-51385408)
chr3 (115-172)||(9158947-9159004)
chr3 (114-171)||(33074977-33075034)
chr3 (111-172)||(42643340-42643401)
chr3 (115-172)||(48117439-48117496)
chr3 (121-172)||(21481867-21481918)
chr3 (113-172)||(25559807-25559866)
chr3 (111-172)||(1261282-1261343)
chr3 (111-172)||(10565155-10565215)
chr3 (127-172)||(43894908-43894953)
chr3 (115-172)||(49361748-49361805)
chr3 (116-172)||(5188339-5188395)
chr3 (116-172)||(11173553-11173609)
chr3 (128-172)||(36301132-36301176)
chr3 (113-172)||(25806433-25806492)
chr3 (121-172)||(34208370-34208421)
chr3 (122-172)||(34021381-34021431)
chr3 (122-172)||(37215149-37215199)
chr3 (122-172)||(47484382-47484432)
chr3 (122-172)||(50879698-50879748)
chr3 (115-172)||(2935422-2935479)
chr3 (115-172)||(14838956-14839013)
chr3 (115-168)||(29057755-29057808)
chr3 (115-172)||(29555752-29555809)
chr3 (115-172)||(29846802-29846859)
chr3 (115-172)||(30664604-30664661)
chr3 (115-168)||(43220053-43220106)
chr3 (115-172)||(44689906-44689963)
chr3 (127-172)||(50745652-50745697)
chr3 (116-172)||(1031339-1031395)
chr3 (116-172)||(7231918-7231974)
chr3 (116-172)||(29706006-29706062)
chr3 (114-154)||(31763928-31763968)
chr3 (116-172)||(35368714-35368770)
chr3 (116-172)||(46473231-46473287)
chr3 (111-171)||(47683894-47683954)
chr3 (116-172)||(50294036-50294092)
[»] chr7 (20 HSPs)
chr7 (111-172)||(2600441-2600502)
chr7 (111-172)||(37970036-37970097)
chr7 (114-172)||(47379663-47379721)
chr7 (113-172)||(640495-640554)
chr7 (113-168)||(41458809-41458864)
chr7 (113-172)||(11070331-11070390)
chr7 (115-172)||(44185279-44185336)
chr7 (113-169)||(384657-384713)
chr7 (115-169)||(45335969-45336023)
chr7 (115-172)||(23034224-23034281)
chr7 (115-172)||(27704538-27704595)
chr7 (116-172)||(12141987-12142043)
chr7 (122-172)||(7295570-7295620)
chr7 (122-172)||(26041413-26041463)
chr7 (111-169)||(28548142-28548200)
chr7 (122-172)||(32315929-32315979)
chr7 (115-172)||(24380632-24380689)
chr7 (115-172)||(37848531-37848588)
chr7 (115-172)||(38197764-38197821)
chr7 (115-172)||(41910096-41910153)
[»] chr1 (34 HSPs)
chr1 (111-172)||(27787592-27787653)
chr1 (111-172)||(46903573-46903634)
chr1 (113-172)||(6396430-6396489)
chr1 (111-172)||(644799-644860)
chr1 (111-172)||(2827617-2827678)
chr1 (111-172)||(21446125-21446186)
chr1 (111-172)||(28457254-28457315)
chr1 (111-168)||(31666113-31666170)
chr1 (111-172)||(37741859-37741920)
chr1 (114-169)||(40053012-40053067)
chr1 (114-172)||(37947130-37947188)
chr1 (114-172)||(43757689-43757747)
chr1 (114-172)||(51436342-51436399)
chr1 (114-170)||(30596819-30596875)
chr1 (114-172)||(8577412-8577470)
chr1 (114-172)||(31244645-31244703)
chr1 (113-172)||(44714344-44714405)
chr1 (111-169)||(49615182-49615240)
chr1 (114-169)||(43105211-43105266)
chr1 (134-172)||(27954331-27954369)
chr1 (111-172)||(24158753-24158814)
chr1 (115-172)||(26760665-26760722)
chr1 (115-172)||(40240022-40240079)
chr1 (115-169)||(4618750-4618804)
chr1 (122-172)||(19920865-19920915)
chr1 (122-172)||(39010917-39010967)
chr1 (134-172)||(48028629-48028667)
chr1 (115-172)||(1100320-1100377)
chr1 (115-172)||(23399900-23399957)
chr1 (115-172)||(29638818-29638875)
chr1 (115-172)||(30414967-30415024)
chr1 (115-172)||(41564791-41564848)
chr1 (115-172)||(48962089-48962146)
chr1 (116-172)||(5477075-5477131)
[»] scaffold0592 (1 HSPs)
scaffold0592 (114-173)||(1012-1071)
[»] chr4 (36 HSPs)
chr4 (113-172)||(1987622-1987681)
chr4 (111-172)||(4949141-4949202)
chr4 (111-172)||(46309030-46309091)
chr4 (113-172)||(30250207-30250266)
chr4 (113-172)||(9827894-9827953)
chr4 (114-172)||(34538033-34538091)
chr4 (114-172)||(45678366-45678424)
chr4 (115-172)||(4878070-4878127)
chr4 (111-172)||(43983000-43983061)
chr4 (120-172)||(29577352-29577404)
chr4 (129-169)||(54803255-54803295)
chr4 (115-166)||(37775338-37775389)
chr4 (113-168)||(46799862-46799917)
chr4 (115-169)||(8487741-8487795)
chr4 (114-172)||(33776997-33777055)
chr4 (111-172)||(37732052-37732113)
chr4 (115-172)||(50291385-50291442)
chr4 (114-150)||(26442298-26442334)
chr4 (132-172)||(33593288-33593328)
chr4 (103-172)||(45418164-45418234)
chr4 (114-169)||(29863657-29863712)
chr4 (121-172)||(53781754-53781805)
chr4 (127-166)||(54801410-54801449)
chr4 (115-169)||(4577670-4577724)
chr4 (114-172)||(6093515-6093573)
chr4 (122-172)||(8026682-8026732)
chr4 (115-172)||(22893971-22894028)
chr4 (115-172)||(22945639-22945696)
chr4 (111-172)||(36946999-36947060)
chr4 (115-172)||(46355202-46355259)
chr4 (115-172)||(46791902-46791959)
chr4 (116-172)||(5234383-5234439)
chr4 (116-172)||(9162169-9162225)
chr4 (115-171)||(18944389-18944445)
chr4 (116-172)||(31275249-31275305)
chr4 (116-172)||(42915131-42915187)
[»] chr8 (31 HSPs)
chr8 (111-172)||(5742564-5742625)
chr8 (111-172)||(45405742-45405803)
chr8 (114-172)||(42651023-42651081)
chr8 (114-171)||(28156307-28156364)
chr8 (114-172)||(14233554-14233612)
chr8 (111-168)||(38939099-38939156)
chr8 (122-172)||(34247877-34247927)
chr8 (115-172)||(6243137-6243194)
chr8 (111-172)||(32674139-32674200)
chr8 (115-172)||(41776278-41776335)
chr8 (114-172)||(8233406-8233464)
chr8 (114-172)||(34578247-34578305)
chr8 (115-172)||(22203126-22203183)
chr8 (115-172)||(23265264-23265321)
chr8 (115-172)||(25430749-25430806)
chr8 (115-172)||(37471746-37471803)
chr8 (114-172)||(1422612-1422670)
chr8 (122-172)||(9305915-9305965)
chr8 (114-172)||(18550082-18550140)
chr8 (115-169)||(21649081-21649135)
chr8 (122-172)||(22767233-22767283)
chr8 (127-169)||(33692827-33692869)
chr8 (115-168)||(13924116-13924169)
chr8 (115-172)||(22836050-22836107)
chr8 (111-168)||(33635682-33635739)
chr8 (115-172)||(34838181-34838238)
chr8 (127-172)||(43590797-43590842)
chr8 (116-172)||(6005047-6005103)
chr8 (133-173)||(7129635-7129675)
chr8 (114-154)||(34883285-34883325)
chr8 (128-168)||(40459688-40459728)
[»] chr2 (42 HSPs)
chr2 (111-172)||(34373111-34373172)
chr2 (111-172)||(38724224-38724285)
chr2 (111-172)||(40721874-40721935)
chr2 (113-172)||(4858216-4858275)
chr2 (113-172)||(43026039-43026098)
chr2 (114-172)||(1151632-1151690)
chr2 (111-172)||(304899-304960)
chr2 (114-169)||(13850094-13850149)
chr2 (114-169)||(27329019-27329074)
chr2 (111-169)||(9377665-9377723)
chr2 (115-169)||(23141460-23141514)
chr2 (115-169)||(23553250-23553304)
chr2 (115-169)||(30340100-30340154)
chr2 (114-172)||(35518378-35518436)
chr2 (111-172)||(25094455-25094516)
chr2 (115-172)||(43205196-43205253)
chr2 (113-172)||(11728030-11728089)
chr2 (114-169)||(37827695-37827750)
chr2 (114-172)||(8757647-8757705)
chr2 (115-172)||(13881198-13881255)
chr2 (115-172)||(14021323-14021380)
chr2 (115-172)||(38533109-38533166)
chr2 (111-154)||(24727523-24727566)
chr2 (115-153)||(33569690-33569728)
chr2 (115-169)||(37064164-37064218)
chr2 (115-172)||(11828731-11828788)
chr2 (115-172)||(34141546-34141603)
chr2 (115-172)||(35705828-35705885)
chr2 (115-168)||(41156914-41156967)
chr2 (115-172)||(45202043-45202100)
chr2 (116-172)||(3091844-3091900)
chr2 (121-172)||(35008018-35008069)
chr2 (118-172)||(16463395-16463449)
chr2 (114-172)||(19523311-19523369)
chr2 (122-172)||(44484574-44484624)
chr2 (115-172)||(24491588-24491645)
chr2 (115-172)||(27538843-27538900)
chr2 (111-172)||(32755781-32755842)
chr2 (115-172)||(35203660-35203717)
chr2 (116-172)||(11164288-11164344)
chr2 (120-172)||(13711164-13711216)
chr2 (116-172)||(27529630-27529686)
[»] chr6 (13 HSPs)
chr6 (111-168)||(34976723-34976780)
chr6 (114-172)||(608571-608629)
chr6 (114-172)||(22422253-22422311)
chr6 (112-169)||(3335366-3335423)
chr6 (115-172)||(7304016-7304073)
chr6 (115-172)||(9395248-9395305)
chr6 (115-170)||(6997461-6997516)
chr6 (115-172)||(2165211-2165268)
chr6 (115-172)||(2176844-2176901)
chr6 (134-172)||(12151787-12151825)
chr6 (115-172)||(10557512-10557569)
chr6 (115-172)||(32135348-32135405)
chr6 (133-169)||(16865635-16865671)
[»] scaffold0036 (1 HSPs)
scaffold0036 (114-172)||(54572-54630)
[»] scaffold0058 (1 HSPs)
scaffold0058 (115-172)||(3046-3103)
[»] scaffold0286 (1 HSPs)
scaffold0286 (115-172)||(17141-17198)
[»] scaffold0014 (1 HSPs)
scaffold0014 (115-172)||(145150-145207)


Alignment Details
Target: chr5 (Bit Score: 150; Significance: 5e-79; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 19 - 172
Target Start/End: Complemental strand, 5005369 - 5005216
Alignment:
Q  19 aatatggctcatagtcatatttgtctcagttttgtcttgcgtgttctgctaatcatattcatcttaatcaaatgaaaaagtggttttttacgaccatttt 118  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5005369 aatatggctcatagtcatatttgtctcagttttgtcctgcgtgttctgctaatcatattcatcttaatcaaatgaaaaagtggttttttacgaccatttt 5005270  T
Q  119 ggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5005269 ggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 5005216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 431 - 553
Target Start/End: Complemental strand, 5004974 - 5004852
Alignment:
Q  431 ggctaggggccaagaaagaccctcgaagctccaaagagacccactcccacttagcacccaaaaggtagcaaagcgaagaggactctccccactagagaga 530  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  5004974 ggctaggggtcaagaaagaccctcgaagctccaaagagacccactcccacctagcaccaaaaaggtagcaaagcgaagaggactctccccaccagagaga 5004875  T
Q  531 aaacgaaagcctagccccaccca 553  Q
    ||| |||||||||||||||||||    
T  5004874 aaatgaaagcctagccccaccca 5004852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 247 - 378
Target Start/End: Complemental strand, 5005147 - 5005016
Alignment:
Q  247 ttgtacaaatgttgtaccaaaatggtttgtgcaaatatcannnnnnnnaatggtaaaaacatatattaaaaccaaaaacggcttaacaccgaaagggaac 346  Q
    ||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5005147 ttgtacaaatgttgtaccaaaatggtttgtgcaaatatcattttttttaatggtaaaaacatatattaaaaccaaaaacggcttaacaccgaaagggaac 5005048  T
Q  347 aaaacgagaatcagctgataccaccaatactc 378  Q
    || ||||||||||||||||| |||||||||||    
T  5005047 aacacgagaatcagctgatatcaccaatactc 5005016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 3518347 - 3518286
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  3518347 accattttggtacaacctttgagacaactttgttgttctctcttctcattggtcaaaaacaa 3518286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 8761811 - 8761753
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaa 169  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  8761811 accattttggtacaacctttgagacaactttgttgttctctcttttcattggtcaaaaa 8761753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 12612924 - 12612985
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||    
T  12612924 accattttggtacaacttttgggacaaccttgttgttctctcttctcattggtcaaaaacaa 12612985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 35358842 - 35358903
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||    
T  35358842 accattttggtacaacctttgagacaactttgttgttctctcttctcattggacaaaaacaa 35358903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 113 - 172
Target Start/End: Original strand, 10469856 - 10469915
Alignment:
Q  113 cattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||    
T  10469856 cattttggtacaatctttgagacaactttgttgttctctcttctcattggtcaaaaacaa 10469915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 31625983 - 31626041
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaa 169  Q
    |||||||| ||||||||||| |||||||||| |||||||||||| ||||||||||||||    
T  31625983 accattttagtacaacttttaagacaactttattgttctctcttctcattggtcaaaaa 31626041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 43152970 - 43153028
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||| ||  |||||||||||||||||||||| |||||||||||||||||    
T  43152970 attttggtacaactcttaggacaactttgttgttctctcttctcattggtcaaaaacaa 43153028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 1108166 - 1108101
Alignment:
Q  111 accattttggtacaacttttgagacaa----ctttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||||| ||||||||||    ||||||||||||||||| |||||||||||||||||    
T  1108166 accattttggtacaacctttgagacaaacaactttgttgttctctcttctcattggtcaaaaacaa 1108101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 9940215 - 9940157
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||| ||||| ||||  |||||||||||||||||||||| |||||||||||||||||    
T  9940215 attttgatacaatttttaggacaactttgttgttctctcttttcattggtcaaaaacaa 9940157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 17574134 - 17574192
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||||||| |||||| |||||||||| |||| ||| |||||||||||||    
T  17574134 attttggtacaacttttgggacaaccttgttgttctttcttctcactggtcaaaaacaa 17574192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 29765992 - 29765934
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||| ||||||| |||||||||||||||| |  |||||||||||||||||    
T  29765992 attttggtacaacctttgagataactttgttgttctctttattcattggtcaaaaacaa 29765934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 115 - 169
Target Start/End: Complemental strand, 38920006 - 38919952
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaa 169  Q
    ||||||||||||||||  |||||| ||||||||||||||| ||||||||||||||    
T  38920006 ttttggtacaacttttaggacaaccttgttgttctctcttctcattggtcaaaaa 38919952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 173
Target Start/End: Complemental strand, 5043075 - 5043027
Alignment:
Q  125 acttttgagacaactttgttgttctctcttatcattggtcaaaaacaac 173  Q
    ||||||| |||||| ||||||||||||||| ||||||||||||||||||    
T  5043075 acttttgggacaaccttgttgttctctcttctcattggtcaaaaacaac 5043027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 5017277 - 5017230
Alignment:
Q  49 tttgtcttgcgtgttctgctaatcatattcatcttaatcaaatgaaaa 96  Q
    |||||||||| ||||||| ||||||||||||||||||| |||||||||    
T  5017277 tttgtcttgcttgttctgttaatcatattcatcttaataaaatgaaaa 5017230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 35616711 - 35616769
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||| || ||||| |||||| ||||||||||||||| | |||||||||||||||    
T  35616711 attttggtataaattttgggacaaccttgttgttctctcttcttattggtcaaaaacaa 35616769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 37821051 - 37821109
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||||||| |||||| |||||||  |||||| | |||||||||||||||    
T  37821051 attttggtacaacttttgggacaaccttgttgtgttctcttcttattggtcaaaaacaa 37821109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 18729188 - 18729245
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||||||| |||||| |||||||  |||||| | |||||||||||||||    
T  18729188 ttttggtacaacttttgggacaaccttgttgtgttctctttttattggtcaaaaacaa 18729245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 125251 - 125195
Alignment:
Q  116 tttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||| ||||||||||| ||||||||  || ||||||||| |||||||||||||||||    
T  125251 tttgatacaacttttgcgacaacttcttttttctctcttttcattggtcaaaaacaa 125195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 11306855 - 11306799
Alignment:
Q  116 tttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||| ||||||||||||||||||||  || ||||||||| |||||||| ||||||||    
T  11306855 tttgatacaacttttgagacaacttcttttttctctcttttcattggttaaaaacaa 11306799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 34698937 - 34698878
Alignment:
Q  113 cattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaac 173  Q
    ||||||||||||||||| || |||||||||||||| |||||| |||||| | |||||||||    
T  34698937 cattttggtacaacttt-gaaacaactttgttgttttctcttctcattgataaaaaacaac 34698878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 39595433 - 39595377
Alignment:
Q  116 tttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||| ||||||||||| ||||||||  || ||||||||| |||||||||||||||||    
T  39595433 tttgatacaacttttgtgacaacttcttttttctctcttttcattggtcaaaaacaa 39595377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 8442320 - 8442262
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||| || |||||  |||| |||||||||||||||| |||||||||| ||||||    
T  8442320 attttggtataatttttggaacaattttgttgttctctcttctcattggtcagaaacaa 8442262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 169
Target Start/End: Complemental strand, 2863704 - 2863655
Alignment:
Q  120 gtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaa 169  Q
    |||||| ||||| |||||| |||||||| |||||| ||||||||||||||    
T  2863704 gtacaatttttgggacaaccttgttgttatctcttttcattggtcaaaaa 2863655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 12203305 - 12203252
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaa 168  Q
    ||||||||||||||||| |||||  ||||||| ||||||| |||||||| ||||    
T  12203305 ttttggtacaacttttgtgacaatcttgttgtcctctcttctcattggttaaaa 12203252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 34381160 - 34381115
Alignment:
Q  127 ttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| |||||||| ||| ||||||||| |||||||||||||||||    
T  34381160 ttttgtgacaacttcgtttttctctcttttcattggtcaaaaacaa 34381115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 40201031 - 40201088
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||| |||||||||||| |||||| ||||| |||| |||| ||||||||||| |||||    
T  40201031 tttttgtacaacttttgtgacaaccttgttattctttcttctcattggtcaataacaa 40201088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 33567151 - 33567207
Alignment:
Q  116 tttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||| ||||||||||| ||||| ||  || ||||||||| |||||||||||||||||    
T  33567151 tttgatacaacttttgtgacaatttcttttttctctcttttcattggtcaaaaacaa 33567207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 6e-23; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 113 - 172
Target Start/End: Complemental strand, 29533923 - 29533864
Alignment:
Q  113 cattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29533923 cattttggtacaacttttgagacaactttgttgttctctcttctcattggtcaaaaacaa 29533864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 50025592 - 50025653
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  50025592 accattttggtacaacctttgagacaactttgttgttctctcttctcattggtcaaaaacaa 50025653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 16295625 - 16295567
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  16295625 attttggtacaacttttgagacaactttgttgttctctctttttattggtcaaaaacaa 16295567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 2280341 - 2280280
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||    
T  2280341 accattttggtacaatctttgagacaactttgttgttctctcttctcattggtcaaaaacaa 2280280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 9557842 - 9557900
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||    
T  9557842 attttggtacaacttttgagacaattttgttgttctctcttctcattggttaaaaacaa 9557900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 47140582 - 47140643
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||  ||||||||||    
T  47140582 accattttggtacaacttttgagacaactttgttgttctctattttcatttatcaaaaacaa 47140643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 33972044 - 33971986
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||| |||||||||||| ||||||||||||||| |||||||| ||||||||    
T  33972044 attttggtacaatttttgagacaaccttgttgttctctcttctcattggttaaaaacaa 33971986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 38471803 - 38471745
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||  ||||||||||||||||||||||||||| |||||||| ||||||||    
T  38471803 attttggtacaatctttgagacaactttgttgttctctcttctcattggttaaaaacaa 38471745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 14847425 - 14847486
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||||| ||| |||||||||||||||||| |||| |||||||| ||||||||    
T  14847425 accattttggtacaaccttttagacaactttgttgttctatcttctcattggttaaaaacaa 14847486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 9027774 - 9027716
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||||||||  ||||| ||||||||||||||| | |||||||||||||||    
T  9027774 attttggtacaacttttggtacaaccttgttgttctctcttcttattggtcaaaaacaa 9027716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 43149253 - 43149311
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||||||||  ||||| ||||||||||||||| | |||||||||||||||    
T  43149253 attttggtacaacttttggtacaaccttgttgttctctcttcttattggtcaaaaacaa 43149311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 51385350 - 51385408
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| |||||||||||| ||||||  |||||||||||||| |||||||||||||||||    
T  51385350 attttagtacaacttttgggacaaccatgttgttctctcttttcattggtcaaaaacaa 51385408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 9158947 - 9159004
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||||||||||| |||||| ||||||| ||||||| |||||||||||||||||    
T  9158947 ttttgctacaacttttgggacaaccttgttgtgctctcttttcattggtcaaaaacaa 9159004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 33075034 - 33074977
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaaca 171  Q
    ||||| ||||||| |||||||||||||||||||||||| || | ||||||||||||||    
T  33075034 attttagtacaacctttgagacaactttgttgttctctttttttattggtcaaaaaca 33074977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 42643401 - 42643340
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||| || || ||||||||||| |||||||||||||||| ||||| |||||||||||    
T  42643401 accattttgatataatttttgagacaattttgttgttctctcttctcatttgtcaaaaacaa 42643340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 48117496 - 48117439
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||||||||||| |||||| ||||||| ||||||| |||||||||||||||||    
T  48117496 ttttgctacaacttttgggacaaccttgttgtgctctcttttcattggtcaaaaacaa 48117439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 21481918 - 21481867
Alignment:
Q  121 tacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||||||| |  |||||||||||| |||||||||||||||||    
T  21481918 tacaacttttgagacaacctcattgttctctcttctcattggtcaaaaacaa 21481867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 113 - 172
Target Start/End: Complemental strand, 25559866 - 25559807
Alignment:
Q  113 cattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||| |||||| |||||||||| ||| |||||||||||| |||||| ||||||||||    
T  25559866 cattttgatacaacctttgagacaattttattgttctctcttctcattgatcaaaaacaa 25559807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 1261282 - 1261343
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||| ||||| |||| |||||||||||||||| |||||| |||||||| ||||||||    
T  1261282 accatgttgatacaattttttagacaactttgttgttttctcttctcattggttaaaaacaa 1261343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 10565215 - 10565155
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||| |||| ||||||||||| ||||||||| || | |||||||||||||||    
T  10565215 accattttggtacaccttt-gagacaactttattgttctctatttttattggtcaaaaacaa 10565155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 43894908 - 43894953
Alignment:
Q  127 ttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| |||||||||||||| ||||||| |||||||||||||||||    
T  43894908 ttttgggacaactttgttgtgctctcttttcattggtcaaaaacaa 43894953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 49361748 - 49361805
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||| |||||||||||| |||||||||||| |||| |||| ||||||||||| |||||    
T  49361748 ttttagtacaacttttgtgacaactttgttattctttcttctcattggtcaataacaa 49361805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 5188395 - 5188339
Alignment:
Q  116 tttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||||| ||||||||  || ||||||||| |||||||| ||||||||    
T  5188395 tttggtacaacttttgtgacaacttcttttttctctcttttcattggttaaaaacaa 5188339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 11173609 - 11173553
Alignment:
Q  116 tttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||| ||||||||||| ||||||||  || ||||||||| |||||||||||||||||    
T  11173609 tttgatacaacttttgtgacaacttcttttttctctcttttcattggtcaaaaacaa 11173553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 36301132 - 36301176
Alignment:
Q  128 tttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||||    
T  36301132 tttgagataactttgttgttctctcttctcattggttaaaaacaa 36301176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 172
Target Start/End: Original strand, 25806433 - 25806492
Alignment:
Q  113 cattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||| ||| | |||| ||||||||||||| || | |||||||||||||||    
T  25806433 cattttggtacaaccttttaaacaattttgttgttctctttttttattggtcaaaaacaa 25806492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 34208421 - 34208370
Alignment:
Q  121 tacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| |||||||||||||||||| ||||||||| |||||| | ||||||||    
T  34208421 tacaatttttgagacaactttgtttttctctcttctcattgattaaaaacaa 34208370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 34021381 - 34021431
Alignment:
Q  122 acaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||| | |||||||||||| ||||||||| | |||||||||||||||    
T  34021381 acaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaa 34021431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 37215149 - 37215199
Alignment:
Q  122 acaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||| ||||||||  || ||||||||| |||||||||||||||||    
T  37215149 acaacttttgtgacaacttattttttctctcttttcattggtcaaaaacaa 37215199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 47484432 - 47484382
Alignment:
Q  122 acaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||| ||||| || ||||||||||| ||||||| |||||||||||||||||    
T  47484432 acaatttttgggataactttgttgtgctctcttttcattggtcaaaaacaa 47484382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 50879748 - 50879698
Alignment:
Q  122 acaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||| | |||||||||||||||||||||| | |||||||||| ||||    
T  50879748 acaactttagtgacaactttgttgttctctcttcttattggtcaaacacaa 50879698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 2935422 - 2935479
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||| |||||||||||| |||||| ||||| |||| |||| ||||||||||| |||||    
T  2935422 ttttagtacaacttttgtgacaaccttgttattctttcttctcattggtcaataacaa 2935479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 14838956 - 14839013
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||| ||||| |||||| |||||||  |||||| | |||||||||||||||    
T  14838956 ttttggtacaatttttgggacaaccttgttgtgttctctttttattggtcaaaaacaa 14839013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 29057808 - 29057755
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaa 168  Q
    ||||| ||||||||||| |||||| ||||||| ||||||| |||||||| ||||    
T  29057808 ttttgctacaacttttgggacaaccttgttgtgctctcttttcattggttaaaa 29057755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 29555752 - 29555809
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||||||| |||||| |||||||  |||||| | ||| |||||||||||    
T  29555752 ttttggtacaacttttgggacaaccttgttgtgttctcttcttattagtcaaaaacaa 29555809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 29846802 - 29846859
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||||||||||| |||||| ||||||| ||||||| || ||||| ||||||||    
T  29846802 ttttgctacaacttttgggacaaccttgttgtgctctcttttcgttggtaaaaaacaa 29846859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 30664661 - 30664604
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||||||  |||| ||||||||  |||||| | |||||||||||||||    
T  30664661 ttttggtacaacttttggaacaattttgttgtgttctctttttattggtcaaaaacaa 30664604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 43220053 - 43220106
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaa 168  Q
    |||| ||| |||||||| ||||| ||||||||||||| || |||||||||||||    
T  43220053 ttttagtataacttttgggacaattttgttgttctctattctcattggtcaaaa 43220106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 44689963 - 44689906
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||| |||||||||| |||||| |||||||  |||||| | |||||||||||||||    
T  44689963 ttttggaacaacttttgggacaaccttgttgtgttctctttttattggtcaaaaacaa 44689906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 50745697 - 50745652
Alignment:
Q  127 ttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| |||||| ||||||| ||||||| |||||||||||||||||    
T  50745697 ttttgggacaaccttgttgtgctctcttttcattggtcaaaaacaa 50745652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 1031339 - 1031395
Alignment:
Q  116 tttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||||  ||||||||| || |||| |||| | |||||||||||||||    
T  1031339 tttggtacaacttttatgacaactttatttttctttcttcttattggtcaaaaacaa 1031395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 7231918 - 7231974
Alignment:
Q  116 tttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||| ||||||||||| ||||| ||  || ||||||||| |||||||||||||||||    
T  7231918 tttgatacaacttttgtgacaatttattttttctctcttttcattggtcaaaaacaa 7231974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 29706062 - 29706006
Alignment:
Q  116 tttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||| ||||||||||| ||||||||  || ||||||||| |||||||| ||||||||    
T  29706062 tttgatacaacttttgtgacaacttcttttttctctcttttcattggtaaaaaacaa 29706006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 114 - 154
Target Start/End: Complemental strand, 31763968 - 31763928
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctctt 154  Q
    |||||||||||| ||||| ||||| ||||||||||||||||    
T  31763968 attttggtacaatttttgggacaattttgttgttctctctt 31763928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 35368770 - 35368714
Alignment:
Q  116 tttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||| ||||||||||| |||||  ||||||| ||||||| |||||||| ||||||||    
T  35368770 tttgctacaacttttgggacaatcttgttgtgctctcttttcattggtaaaaaacaa 35368714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 46473287 - 46473231
Alignment:
Q  116 tttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||| ||||||||||  ||||||||  || ||||||||| |||||||||||||||||    
T  46473287 tttgatacaacttttatgacaacttcttttttctctcttttcattggtcaaaaacaa 46473231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 47683954 - 47683894
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaaca 171  Q
    |||||||||  ||||||||||||||||| || |  ||||||||| | ||||||||||||||    
T  47683954 accattttgtgacaacttttgagacaaccttctctttctctcttcttattggtcaaaaaca 47683894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 50294036 - 50294092
Alignment:
Q  116 tttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||| |  ||||||||| || ||||||||| |||||| ||||||||||    
T  50294036 tttggtacaacttatttgacaactttctttttctctcttttcattgatcaaaaacaa 50294092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 1e-21; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 2600441 - 2600502
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  2600441 accattttggtacaacctttgagacaactttgttgttctctcttctcattggtcaaaaacaa 2600502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 37970097 - 37970036
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  37970097 accattttggtacaacatttgagacaactttgttgttctctcttctcattggtcaaaaacaa 37970036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 47379721 - 47379663
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  47379721 attttggtgcaacttttgagacaactttgttgttctctcttctcattggttaaaaacaa 47379663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 113 - 172
Target Start/End: Complemental strand, 640554 - 640495
Alignment:
Q  113 cattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||||||    
T  640554 cattttggtataatctttgagacaactttgttgttctctcttctcattggtcaaaaacaa 640495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 41458809 - 41458864
Alignment:
Q  113 cattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaa 168  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||| ||||||    
T  41458809 cattttggtacaacttttgagacaactttgttgttctcttttttcattgatcaaaa 41458864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 172
Target Start/End: Complemental strand, 11070390 - 11070331
Alignment:
Q  113 cattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||| ||  ||||||||||||||||| ||||||||| |||||||||||||||||    
T  11070390 cattttggtagaatctttgagacaactttgttcttctctcttttcattggtcaaaaacaa 11070331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 44185336 - 44185279
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| |||||||||||||||||| |  |||||||||||| |||||||||||||||||    
T  44185336 ttttgatacaacttttgagacaacctcattgttctctcttctcattggtcaaaaacaa 44185279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 169
Target Start/End: Complemental strand, 384713 - 384657
Alignment:
Q  113 cattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaa 169  Q
    ||||||| |||||| ||||||||||||||||| ||||||||| |||||||| |||||    
T  384713 cattttgatacaacctttgagacaactttgttattctctcttctcattggttaaaaa 384657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 169
Target Start/End: Complemental strand, 45336023 - 45335969
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaa 169  Q
    ||||||||||| ||||| |||||| ||||||||||||||| | ||||||||||||    
T  45336023 ttttggtacaaattttgggacaaccttgttgttctctctttttattggtcaaaaa 45335969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 23034224 - 23034281
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||||||| |||||| ||||||| |||| || | |||||||||||||||    
T  23034224 ttttggtacaacttttgggacaaccttgttgtgctcttttcttattggtcaaaaacaa 23034281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 27704595 - 27704538
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||||||||||| ||||||||||||||  |||||| | |||||||||||||||    
T  27704595 ttttgttacaacttttgggacaactttgttgtgttctcttcttattggtcaaaaacaa 27704538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 12142043 - 12141987
Alignment:
Q  116 tttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||| ||||||||||| ||||||||| || |||| |||| |||||||||||||||||    
T  12142043 tttgatacaacttttgtgacaactttttttttctttcttttcattggtcaaaaacaa 12141987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 7295620 - 7295570
Alignment:
Q  122 acaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||  ||||| ||||| ||||||||| |||||||||||||||||    
T  7295620 acaacttttggaacaaccttgttattctctcttctcattggtcaaaaacaa 7295570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 26041463 - 26041413
Alignment:
Q  122 acaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||| | |||||||||||| ||||||||| | |||||||||||||||    
T  26041463 acaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaa 26041413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 28548142 - 28548200
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaa 169  Q
    |||||||| ||||||  |||||||||||||| |||||||||||| | |||||| |||||    
T  28548142 accattttagtacaatctttgagacaactttattgttctctcttcttattggttaaaaa 28548200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 32315979 - 32315929
Alignment:
Q  122 acaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||| |||||| ||||| ||||||||| | |||||||||||||||    
T  32315979 acaacttttgtgacaacattgtttttctctcttcttattggtcaaaaacaa 32315929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 24380632 - 24380689
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||||||  ||||| |||||||  |||||| | |||||||||||||||    
T  24380632 ttttggtacaacttttggaacaaccttgttgtgttctcttcttattggtcaaaaacaa 24380689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 37848531 - 37848588
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||||||||||  || ||| ||||||| ||||||| |||||||||||||||||    
T  37848531 ttttgctacaacttttaggataaccttgttgtgctctcttttcattggtcaaaaacaa 37848588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 38197821 - 38197764
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||||||||||| |||||  ||||||| || |||| |||||||||||||||||    
T  38197821 ttttgctacaacttttgggacaatcttgttgtgctatcttttcattggtcaaaaacaa 38197764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 41910096 - 41910153
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||||||  |||||| |||||||  |||||| | |||||||||||||||    
T  41910096 ttttggtacaacttttaggacaaccttgttgtgttctcttcttattggtcaaaaacaa 41910153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 1e-21; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 27787653 - 27787592
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  27787653 accattttggtacaacttttgagacaactttgttgttctctcttctcatttgtcaaaaacaa 27787592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 46903634 - 46903573
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  46903634 accattttggtacaacctttgagacaactttgttgttctctcttctcattggtcaaaaacaa 46903573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 113 - 172
Target Start/End: Complemental strand, 6396489 - 6396430
Alignment:
Q  113 cattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||    
T  6396489 cattttggtacaacatttgagacaactttgttgttctctcttctcattggttaaaaacaa 6396430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 644860 - 644799
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||||| |||||||||||||| |||||||||||| ||||| |||||||||||    
T  644860 accattttggtacaacatttgagacaactttattgttctctcttctcattagtcaaaaacaa 644799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 2827617 - 2827678
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||||| |||||||||| |||||||||||||||| | |||||||||||||||    
T  2827617 accattttggtacaacctttgagacaattttgttgttctctcttcttattggtcaaaaacaa 2827678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 21446125 - 21446186
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||||| |||||||||||||||||| |||||||| |||||||| ||||||||    
T  21446125 accattttggtacaacctttgagacaactttgttgatctctcttctcattggttaaaaacaa 21446186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 28457254 - 28457315
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||||| |||||||||||||| ||||||||| || |||||||||||||||||    
T  28457254 accattttggtacaacctttgagacaactttattgttctctattttcattggtcaaaaacaa 28457315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 31666113 - 31666170
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaa 168  Q
    |||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||    
T  31666113 accattttggtacaatctttgagacaactttgttgttctctcttctcattggtcaaaa 31666170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 37741859 - 37741920
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||| ||||| |||||||||||||||||||||||||||| |||||||| ||||||||    
T  37741859 accattttgatacaatttttgagacaactttgttgttctctcttctcattggttaaaaacaa 37741920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 40053067 - 40053012
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaa 169  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||    
T  40053067 attttggtacaatctttgagacaactttgttgttctctcttttcattggtcaaaaa 40053012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 37947130 - 37947188
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||| ||||||||||| |||||| ||||||||||||||| |||||||||||||||||    
T  37947130 attttgttacaacttttgggacaaccttgttgttctctcttctcattggtcaaaaacaa 37947188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 43757747 - 43757689
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||| || |||||||||||||||||||||||||||| |||||||| ||||||||    
T  43757747 attttggtataatttttgagacaactttgttgttctctcttttcattggttaaaaacaa 43757689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 51436342 - 51436399
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||    
T  51436342 attttggtaca-cttttgagacaactttgttgttctctcttctcattggttaaaaacaa 51436399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 114 - 170
Target Start/End: Complemental strand, 30596875 - 30596819
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaac 170  Q
    ||||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||    
T  30596875 attttggtacaacctttgagacaactttattgttctttcttttcattggtcaaaaac 30596819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 8577412 - 8577470
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||| |||||||| |||||| |||||||||||| || |||||||||||||||||    
T  8577412 attttggtataacttttgggacaaccttgttgttctctattctcattggtcaaaaacaa 8577470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 31244645 - 31244703
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||| |||| ||||||  |||||||||||||| |||||||||||||||||    
T  31244645 attttggtacaacatttgggacaaccatgttgttctctcttctcattggtcaaaaacaa 31244703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 113 - 172
Target Start/End: Complemental strand, 44714405 - 44714344
Alignment:
Q  113 cattttggtacaacttttgagacaactttg--ttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||| |||||||||||||||  |||||||||||| | |||||||||||||||    
T  44714405 cattttggtacaacctttgagacaactttgttttgttctctctttttattggtcaaaaacaa 44714344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 49615182 - 49615240
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaa 169  Q
    |||||||||||||||  |||||||||||||| ||||||||| || ||||||||||||||    
T  49615182 accattttggtacaatctttgagacaactttattgttctcttttctcattggtcaaaaa 49615240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 43105266 - 43105211
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaa 169  Q
    |||||||||||| ||||| ||||||||| |||||||||||| | ||||||||||||    
T  43105266 attttggtacaatttttgggacaactttattgttctctctttttattggtcaaaaa 43105211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 27954369 - 27954331
Alignment:
Q  134 acaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  27954369 acaactttgttgttctctcttctcattggtcaaaaacaa 27954331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 24158814 - 24158753
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||| || ||||| |||||||||||||||||||||| |||| | |||||| ||||||||    
T  24158814 accatttaggaacaacctttgagacaactttgttgttctgtcttcttattggtaaaaaacaa 24158753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 26760722 - 26760665
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| || ||||||||||||||| ||||||| ||||||| | |||||||||||||||    
T  26760722 ttttgttataacttttgagacaaccttgttgtgctctctttttattggtcaaaaacaa 26760665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 40240022 - 40240079
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||||||||||| |||||| ||||||| || |||| |||||||||||||||||    
T  40240022 ttttgctacaacttttgggacaaccttgttgtgctatcttttcattggtcaaaaacaa 40240079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 115 - 169
Target Start/End: Complemental strand, 4618804 - 4618750
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaa 169  Q
    |||||||| |||||||| || ||| |||||||||||| || ||||||||||||||    
T  4618804 ttttggtataacttttgggataaccttgttgttctcttttttcattggtcaaaaa 4618750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 19920915 - 19920865
Alignment:
Q  122 acaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||| | |||||||||||| ||||||||| | |||||||||||||||    
T  19920915 acaactttggtgacaactttgtttttctctcttcttattggtcaaaaacaa 19920865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 39010967 - 39010917
Alignment:
Q  122 acaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||| ||||||||  || ||||||||| |||||||||||||||||    
T  39010967 acaacttttgtgacaacttattttttctctcttttcattggtcaaaaacaa 39010917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 48028667 - 48028629
Alignment:
Q  134 acaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||||||||||| |||||||| ||||||||    
T  48028667 acaactttgttgttctctcttctcattggttaaaaacaa 48028629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 1100377 - 1100320
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||| |||||||||||| |||||| ||||| |||| |||| ||||||||||| |||||    
T  1100377 ttttagtacaacttttgtgacaaccttgttattctttcttctcattggtcaataacaa 1100320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 23399900 - 23399957
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||| ||||| |||||| |||||||  |||||| | |||||||||||||||    
T  23399900 ttttggtacaatttttgggacaaccttgttgtgttctcttcttattggtcaaaaacaa 23399957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 29638875 - 29638818
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||| ||||| ||||| ||||||||  |||||| | |||||||||||||||    
T  29638875 ttttggtacaatttttgggacaattttgttgtgttctcttcttattggtcaaaaacaa 29638818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 30415024 - 30414967
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||||||| |||||  |||||||  |||||| | |||||||||||||||    
T  30415024 ttttggtacaacttttgggacaatcttgttgtgttctcttcttattggtcaaaaacaa 30414967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 41564791 - 41564848
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||| ||||| |||||| |||||||  |||||| | |||||||||||||||    
T  41564791 ttttggtacaatttttgggacaaccttgttgtgttctcttcttattggtcaaaaacaa 41564848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 48962146 - 48962089
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||| ||||| |||||| |||||||  |||||| | |||||||||||||||    
T  48962146 ttttggtacaatttttgggacaaccttgttgtgttctcttcttattggtcaaaaacaa 48962089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 5477075 - 5477131
Alignment:
Q  116 tttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||| ||||||||||| ||||||||  || ||||||||| | |||||||||||||||    
T  5477075 tttgatacaacttttgtgacaacttcttttttctctctttttattggtcaaaaacaa 5477131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 1071 - 1012
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaac 173  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  1071 attttggtacaacttttgagataactttgttgttctctcttttcattggtcaaaaacaac 1012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 2e-20; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 113 - 172
Target Start/End: Original strand, 1987622 - 1987681
Alignment:
Q  113 cattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  1987622 cattttggtacaacctttgagacaactttgttgttctctcttttcattggtcaaaaacaa 1987681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 4949141 - 4949202
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||    
T  4949141 accattttggtacaacttttgagacaactttgttgttctttcttctcattggttaaaaacaa 4949202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 46309030 - 46309091
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||    
T  46309030 accattttggtacaacctttgagacaactttgtagttctctcttttcattggtcaaaaacaa 46309091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 113 - 172
Target Start/End: Original strand, 30250207 - 30250266
Alignment:
Q  113 cattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||    
T  30250207 cattttggtacaacctttgagacaactttgttgttctctctttttattggtcaaaaacaa 30250266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 113 - 172
Target Start/End: Original strand, 9827894 - 9827953
Alignment:
Q  113 cattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||| ||| |||||||||||||||||||| |||||| |||||||||||||||||    
T  9827894 cattttggtataacctttgagacaactttgttgttatctcttctcattggtcaaaaacaa 9827953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 34538091 - 34538033
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||| |||||||||||||||||||||| |||| ||| |||||||| ||||    
T  34538091 attttggtacaacctttgagacaactttgttgttctatcttttcaatggtcaaacacaa 34538033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 45678424 - 45678366
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||||||||  ||||| ||||||||||||||| | |||||||||||||||    
T  45678424 attttggtacaacttttggtacaaccttgttgttctctctttttattggtcaaaaacaa 45678366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 4878127 - 4878070
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||||||||||| |||||| ||||||| ||||||| |||||||||||||||||    
T  4878127 ttttgctacaacttttgggacaaccttgttgtgctctcttttcattggtcaaaaacaa 4878070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 43983061 - 43983000
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||||||||||  |||||  | ||||||||||||| |||||||||||||||||    
T  43983061 accattttggtacaacttttaggacaatctagttgttctctcttctcattggtcaaaaacaa 43983000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 29577352 - 29577404
Alignment:
Q  120 gtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||| ||||| |||||| ||||||||||||||| |||||||||||||||||    
T  29577352 gtacaatttttgggacaaccttgttgttctctcttttcattggtcaaaaacaa 29577404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 54803255 - 54803295
Alignment:
Q  129 ttgagacaactttgttgttctctcttatcattggtcaaaaa 169  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  54803255 ttgagacaactttgttgttctctcttttcattggtcaaaaa 54803295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 37775338 - 37775389
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaa 166  Q
    |||| ||||||||||||||||||| ||||| |||||| ||||||||||||||    
T  37775338 ttttcgtacaacttttgagacaaccttgttattctctattatcattggtcaa 37775389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 46799917 - 46799862
Alignment:
Q  113 cattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaa 168  Q
    ||||||||||||| ||||| |||||| |||||||||||| || |||||||||||||    
T  46799917 cattttggtacaatttttgggacaaccttgttgttctctattctcattggtcaaaa 46799862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 169
Target Start/End: Complemental strand, 8487795 - 8487741
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaa 169  Q
    ||||| |||||||||||||||||| ||||||| ||||||| | ||||||||||||    
T  8487795 ttttgctacaacttttgagacaaccttgttgtgctctctttttattggtcaaaaa 8487741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 33777055 - 33776997
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||| ||||| || ||| ||||||||||||||| | |||||||||||||||    
T  33777055 attttggtacaatttttgggataaccttgttgttctctctttttattggtcaaaaacaa 33776997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 37732113 - 37732052
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||| |||||||  ||||| |||||||| |||||||||||| | |||||||||||||||    
T  37732113 accatttcggtacaatctttgaaacaactttattgttctctctttttattggtcaaaaacaa 37732052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 50291442 - 50291385
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||||||| |||||| |||||||  |||||| | |||||||||||||||    
T  50291442 ttttggtacaacttttgggacaaccttgttgtgttctcttcttattggtcaaaaacaa 50291385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 26442298 - 26442334
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctc 150  Q
    ||||||||||||| |||||||||||||||||||||||    
T  26442298 attttggtacaacctttgagacaactttgttgttctc 26442334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 33593288 - 33593328
Alignment:
Q  132 agacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||||||||||||| | |||||||||||||||    
T  33593288 agacaactttgttgttctctctttttattggtcaaaaacaa 33593328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 172
Target Start/End: Complemental strand, 45418234 - 45418164
Alignment:
Q  103 tttttacgaccattttggtacaacttttgagacaactttgt--tgttctctcttatcattggtcaaaaacaa 172  Q
    |||| ||||||||||||||||| |||| ||||||||||| |  |||||||| || |||||||||||||||||    
T  45418234 ttttaacgaccattttggtacaccttt-gagacaactttatattgttctctattttcattggtcaaaaacaa 45418164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 29863712 - 29863657
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaa 169  Q
    ||||||||||||||||||||||||| |||||| |||| ||| | |||||| |||||    
T  29863712 attttggtacaacttttgagacaacattgttgctctcccttcttattggttaaaaa 29863657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 53781754 - 53781805
Alignment:
Q  121 tacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||| |||||| ||||| | ||||||| |||||||||||||||||    
T  53781754 tacaacttttgggacaaccttgttatgctctcttttcattggtcaaaaacaa 53781805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 166
Target Start/End: Original strand, 54801410 - 54801449
Alignment:
Q  127 ttttgagacaactttgttgttctctcttatcattggtcaa 166  Q
    |||||||||||||||||| ||||||||| |||||||||||    
T  54801410 ttttgagacaactttgttattctctcttctcattggtcaa 54801449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 115 - 169
Target Start/End: Complemental strand, 4577724 - 4577670
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaa 169  Q
    ||||| ||||||||||| |||||| ||||||| ||||||| |||||||| |||||    
T  4577724 ttttgctacaacttttgggacaaccttgttgtgctctcttttcattggtaaaaaa 4577670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 6093515 - 6093573
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||| ||  |||||||||| |||||||||||||||| | || ||||||||||||    
T  6093515 attttggtataatctttgagacaattttgttgttctctctttttatcggtcaaaaacaa 6093573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 8026682 - 8026732
Alignment:
Q  122 acaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||| | |||||||||||| ||||||||| | |||||||||||||||    
T  8026682 acaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaa 8026732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 22894028 - 22893971
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||||||||||| |||||  ||||||| ||||||| | |||||||||||||||    
T  22894028 ttttgctacaacttttgggacaatcttgttgtgctctctttttattggtcaaaaacaa 22893971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 22945696 - 22945639
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||||||||||| |||||  ||||||| ||||||| | |||||||||||||||    
T  22945696 ttttgctacaacttttgggacaatcttgttgtgctctctttttattggtcaaaaacaa 22945639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 36946999 - 36947060
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||| || || |||||||| || |||||||||||||||| | |||| ||||||||||    
T  36946999 accattttgatataatttttgagataattttgttgttctctctttttattgatcaaaaacaa 36947060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 46355202 - 46355259
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||| |||||||||||| |||||||||| | |||||| || ||||||||||| |||||    
T  46355202 tttttgtacaacttttgggacaactttggtattctcttttctcattggtcaataacaa 46355259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 46791902 - 46791959
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| |||||||||||||||||| |  |||||||||||  |||||| ||||||||||    
T  46791902 ttttgatacaacttttgagacaacctcattgttctctctactcattgatcaaaaacaa 46791959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 5234383 - 5234439
Alignment:
Q  116 tttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||| ||||||||||| ||||| ||| || ||||||||| | |||||||||||||||    
T  5234383 tttgatacaacttttgtgacaattttttttttctctctttttattggtcaaaaacaa 5234439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 9162225 - 9162169
Alignment:
Q  116 tttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||| ||||| ||||| ||||||||  || ||||||||| |||||||||||||||||    
T  9162225 tttgatacaatttttgtgacaacttcttttttctctcttttcattggtcaaaaacaa 9162169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 18944445 - 18944389
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaaca 171  Q
    ||||||||||||||||| |||||| || ||||  |||||| | ||||||||||||||    
T  18944445 ttttggtacaacttttgggacaaccttattgtgttctcttcttattggtcaaaaaca 18944389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 31275305 - 31275249
Alignment:
Q  116 tttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||| ||||||||||| ||||| ||  || ||||||||| |||||||||||||||||    
T  31275305 tttgatacaacttttgtgacaatttcttttttctctcttttcattggtcaaaaacaa 31275249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 42915131 - 42915187
Alignment:
Q  116 tttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||| ||||||||||| ||||||||  || ||||||||| |||||||| ||||||||    
T  42915131 tttgatacaacttttgtgacaacttcttttttctctcttttcattggttaaaaacaa 42915187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 5742564 - 5742625
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||    
T  5742564 accattttggtacatcctttgagacaactttgttgttctctcttctcattggtcaaaaacaa 5742625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 45405742 - 45405803
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||    
T  45405742 accattttggtacaacctttgagacaactttattgttctctcttctcattggtcaaaaacaa 45405803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 42651081 - 42651023
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||    
T  42651081 attttggtacaacttttgagacaaccttgttgttctctcttctcattggttaaaaacaa 42651023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 28156364 - 28156307
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaaca 171  Q
    ||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  28156364 attttagtacaacctttgagacaactttgttgttctctcttctcattggtcaaaaaca 28156307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 14233554 - 14233612
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||| |||||||| |||||||||||||||||||||| |||||||| ||||||||    
T  14233554 attttggtataacttttgtgacaactttgttgttctctcttctcattggtaaaaaacaa 14233612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 38939099 - 38939156
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaa 168  Q
    ||||||||||||||| |||||||| ||||||||||||||||||| |||||||| ||||    
T  38939099 accattttggtacaatttttgagataactttgttgttctctcttctcattggttaaaa 38939156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 34247927 - 34247877
Alignment:
Q  122 acaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||| |||||| ||||||||||||||| |||||||||||||||||    
T  34247927 acaacttttgggacaaccttgttgttctctcttttcattggtcaaaaacaa 34247877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 6243194 - 6243137
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||||||||||| ||||| |||||||| ||||||| |||||||||||||||||    
T  6243194 ttttgctacaacttttgggacaattttgttgtgctctcttttcattggtcaaaaacaa 6243137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 32674139 - 32674200
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||| ||||||| |||||||||||||||||||| || ||| |||||||| ||||||||    
T  32674139 accattttagtacaacctttgagacaactttgttgttatcccttctcattggttaaaaacaa 32674200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 41776335 - 41776278
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||||||||||| |||||| ||||||| ||||||| |||||||||||||||||    
T  41776335 ttttgctacaacttttgggacaaccttgttgtgctctcttttcattggtcaaaaacaa 41776278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 8233406 - 8233464
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| |||||||||||  || ||| ||||||||||||||| |||||||||||||||||    
T  8233406 atttttgtacaactttttggataaccttgttgttctctcttctcattggtcaaaaacaa 8233464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 34578247 - 34578305
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||| || ||||| |||||||||||||||||||||| | |||| ||||||||||    
T  34578247 attttggtataatttttgggacaactttgttgttctctcttcttattgatcaaaaacaa 34578305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 22203126 - 22203183
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||||||||||| |||||| ||||||| ||||||| | |||||||||||||||    
T  22203126 ttttgctacaacttttgggacaaccttgttgtgctctcttttgattggtcaaaaacaa 22203183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 23265264 - 23265321
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||||||||||| ||||| |||||||| ||||||| | |||||||||||||||    
T  23265264 ttttgttacaacttttgcgacaattttgttgtgctctctttttattggtcaaaaacaa 23265321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 25430806 - 25430749
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||||||| |||||| |||||||  |||||| | |||||||||||||||    
T  25430806 ttttggtacaacttttgggacaaccttgttgtgttctcttcttattggtcaaaaacaa 25430749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 37471803 - 37471746
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||||||||||| |||||  ||||||| ||||||| |||||||||||||||||    
T  37471803 ttttgctacaacttttgggacaatcttgttgtgctctcttttcattggtcaaaaacaa 37471746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 1422612 - 1422670
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||| ||||||||||| |||||| ||||| |||| | || |||||||||||||||||    
T  1422612 attttgatacaacttttgggacaaccttgttattctattttttcattggtcaaaaacaa 1422670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 9305915 - 9305965
Alignment:
Q  122 acaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||||||| ||| | ||||||||| |||||| ||||||||||    
T  9305915 acaacttttgagacaaccttgatattctctcttttcattgatcaaaaacaa 9305965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 18550140 - 18550082
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||||||| |||||| |||||||  |||||| | |||| ||||||||||    
T  18550140 attttggtacaacttttgggacaaccttgttgtgttctcttcttattgatcaaaaacaa 18550082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 115 - 169
Target Start/End: Original strand, 21649081 - 21649135
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaa 169  Q
    ||||| ||||||||||| |||||| ||||||| ||||||| | ||||||||||||    
T  21649081 ttttgctacaacttttgggacaaccttgttgtgctctctttttattggtcaaaaa 21649135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 22767283 - 22767233
Alignment:
Q  122 acaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||| ||||||||  || ||||||||| |||||||||||||||||    
T  22767283 acaacttttgtgacaacttcttttttctctcttttcattggtcaaaaacaa 22767233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 169
Target Start/End: Complemental strand, 33692869 - 33692827
Alignment:
Q  127 ttttgagacaactttgttgttctctcttatcattggtcaaaaa 169  Q
    ||||| |||||||||||||| ||||||| ||||||||||||||    
T  33692869 ttttgggacaactttgttgtgctctcttttcattggtcaaaaa 33692827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 13924169 - 13924116
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaa 168  Q
    ||||||||||||||||| |||||  ||||||| ||||||| |||||||| ||||    
T  13924169 ttttggtacaacttttgtgacaatcttgttgtcctctcttctcattggttaaaa 13924116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 22836050 - 22836107
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||||| ||||| || ||| ||||||| ||||||| |||||||||||||||||    
T  22836050 ttttgctacaatttttgggataaccttgttgtgctctcttttcattggtcaaaaacaa 22836107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 33635739 - 33635682
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaa 168  Q
    ||||||||  |||||  ||||||| |||||| |||||||||||| |||||||||||||    
T  33635739 accattttaatacaatctttgagataactttattgttctctcttctcattggtcaaaa 33635682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 34838181 - 34838238
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||||||  |||||| |||||||  |||||| | |||||||||||||||    
T  34838181 ttttggtacaacttttaggacaaccttgttgtgttctcttcttattggtcaaaaacaa 34838238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 43590842 - 43590797
Alignment:
Q  127 ttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||| ||| |||| ||||||| |||||||||||||||||    
T  43590842 ttttgagacaattttattgtgctctcttttcattggtcaaaaacaa 43590797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 6005103 - 6005047
Alignment:
Q  116 tttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||| |  |||||||||  | ||||||||| |||||||||||||||||    
T  6005103 tttggtacaacttatttgacaactttccttttctctcttttcattggtcaaaaacaa 6005047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 133 - 173
Target Start/End: Complemental strand, 7129675 - 7129635
Alignment:
Q  133 gacaactttgttgttctctcttatcattggtcaaaaacaac 173  Q
    |||||||||||| ||||||||| | ||||||||||||||||    
T  7129675 gacaactttgtttttctctcttcttattggtcaaaaacaac 7129635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 114 - 154
Target Start/End: Complemental strand, 34883325 - 34883285
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctctt 154  Q
    ||||| ||||||||||||| ||||| |||||||||||||||    
T  34883325 attttagtacaacttttgatacaaccttgttgttctctctt 34883285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 128 - 168
Target Start/End: Original strand, 40459688 - 40459728
Alignment:
Q  128 tttgagacaactttgttgttctctcttatcattggtcaaaa 168  Q
    ||||||||||||||||||||||| |||  ||||||||||||    
T  40459688 tttgagacaactttgttgttctccctttccattggtcaaaa 40459728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 34373172 - 34373111
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  34373172 accattttggtataacctttgagacaactttgttgttctctcttctcattggtcaaaaacaa 34373111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 38724224 - 38724285
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||    
T  38724224 accattttggtacaacctttgagacaactttgttgttctctctattcattggtcaaaaacaa 38724285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 40721935 - 40721874
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||    
T  40721935 accattttggtacaacctttgagacaactttgttgttctctcttctcattggttaaaaacaa 40721874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 113 - 172
Target Start/End: Complemental strand, 4858275 - 4858216
Alignment:
Q  113 cattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||    
T  4858275 cattttggtacaacctttgagacaattttgttgttctctcttttcattggtcaaaaacaa 4858216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 113 - 172
Target Start/End: Complemental strand, 43026098 - 43026039
Alignment:
Q  113 cattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||    
T  43026098 cattttggtacaacctttgagacaactttgttgttctctcttctcattggttaaaaacaa 43026039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 1151690 - 1151632
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||    
T  1151690 attttggtacaacctttgagacaactttgttgttctcttttttcattggtcaaaaacaa 1151632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 304899 - 304960
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||| |||||| ||||||||||||||||||||| ||||| |||||||||||||||||    
T  304899 accattttgatacaacctttgagacaactttgttgttcactcttctcattggtcaaaaacaa 304960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 114 - 169
Target Start/End: Original strand, 13850094 - 13850149
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaa 169  Q
    ||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||    
T  13850094 attttggtataacttttgagacaattttgttgttctctcttttcattggtcaaaaa 13850149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 114 - 169
Target Start/End: Original strand, 27329019 - 27329074
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaa 169  Q
    ||||||||||| |||||||||||||||||||||||||| || ||||||||||||||    
T  27329019 attttggtacatcttttgagacaactttgttgttctcttttctcattggtcaaaaa 27329074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 9377665 - 9377723
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaa 169  Q
    |||||||||||| ||| ||||||||||||||||||||||||||| | ||||||||||||    
T  9377665 accattttggtataacctttgagacaactttgttgttctctcttcttattggtcaaaaa 9377723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 115 - 169
Target Start/End: Complemental strand, 23141514 - 23141460
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaa 169  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||    
T  23141514 ttttggtacaacttttgggacaaccttgttgttctctcttctcattggtcaaaaa 23141460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 115 - 169
Target Start/End: Complemental strand, 23553304 - 23553250
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaa 169  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||    
T  23553304 ttttggtacaacttttgggacaaccttgttgttctctcttctcattggtcaaaaa 23553250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 115 - 169
Target Start/End: Complemental strand, 30340154 - 30340100
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaa 169  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||    
T  30340154 ttttggtacaacttttgggacaaccttgttgttctctcttctcattggtcaaaaa 30340100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 35518436 - 35518378
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||| ||||||||||| |||||||||||||||||||||| | |||||||||||||||    
T  35518436 attttgatacaacttttgggacaactttgttgttctctcttcttattggtcaaaaacaa 35518378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 25094516 - 25094455
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||| ||||||  ||||||||||||||||||||||||||| | |||||||||||||||    
T  25094516 accattttagtacaatctttgagacaactttgttgttctctcttctaattggtcaaaaacaa 25094455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 43205253 - 43205196
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||||||||||| |||||||||||||| ||||||| |||||||||||||||||    
T  43205253 ttttgctacaacttttgggacaactttgttgtgctctcttttcattggtcaaaaacaa 43205196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 172
Target Start/End: Original strand, 11728030 - 11728089
Alignment:
Q  113 cattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||  ||| |||||||||||||||| |||||| |||||||||||||||||    
T  11728030 cattttggtacaatctttaagacaactttgttgttttctcttttcattggtcaaaaacaa 11728089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 169
Target Start/End: Original strand, 37827695 - 37827750
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaa 169  Q
    ||||||||||||  ||| ||||||||||||||||||||||| ||||||||||||||    
T  37827695 attttggtacaatctttaagacaactttgttgttctctcttttcattggtcaaaaa 37827750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 8757705 - 8757647
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||||||||  ||||| ||||||||||||||| | |||||||||||||||    
T  8757705 attttggtacaacttttggtacaaccttgttgttctctcttcttattggtcaaaaacaa 8757647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 13881255 - 13881198
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||||||||||| ||||||||| |||| ||||||| |||||||||||||||||    
T  13881255 ttttgctacaacttttgtgacaactttattgtgctctcttttcattggtcaaaaacaa 13881198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 14021380 - 14021323
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||||||||||| ||||||||| |||| ||||||| |||||||||||||||||    
T  14021380 ttttgctacaacttttgtgacaactttattgtgctctcttttcattggtcaaaaacaa 14021323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 38533109 - 38533166
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||| ||||| |||||| |||||||||||| || |||||||||||||||||    
T  38533109 ttttggtacaatttttgggacaaccttgttgttctctattgtcattggtcaaaaacaa 38533166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 154
Target Start/End: Complemental strand, 24727566 - 24727523
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctctt 154  Q
    |||||||||||||||| |||||||||||||| ||||||||||||    
T  24727566 accattttggtacaacctttgagacaactttattgttctctctt 24727523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 33569728 - 33569690
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctct 153  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  33569728 ttttggtacaacttttgagacaactttgttattctctct 33569690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 169
Target Start/End: Complemental strand, 37064218 - 37064164
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaa 169  Q
    ||||||||||||||||| || ||| |||||||| |||||| ||||||||||||||    
T  37064218 ttttggtacaacttttgggataaccttgttgttttctcttctcattggtcaaaaa 37064164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 11828731 - 11828788
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||||||||||  |||||| ||||||| ||||||| |||||||||||||||||    
T  11828731 ttttgctacaacttttaggacaaccttgttgtgctctcttttcattggtcaaaaacaa 11828788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 34141603 - 34141546
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||||||  |||||||||||||  |||||| | |||||||||||||||    
T  34141603 ttttggtacaacttttggaacaactttgttgtgttctcttcttattggtcaaaaacaa 34141546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 35705828 - 35705885
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||||||||||| |||||  ||||||| ||||||| |||||||||||||||||    
T  35705828 ttttgctacaacttttgggacaatcttgttgtgctctcttttcattggtcaaaaacaa 35705885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 41156914 - 41156967
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaa 168  Q
    ||||| ||||||||||| ||||| |||||||| ||||||| |||||||||||||    
T  41156914 ttttgctacaacttttgggacaattttgttgtgctctcttttcattggtcaaaa 41156967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 45202043 - 45202100
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||||||||||| |||||| ||||||| ||||||| |||||| ||||||||||    
T  45202043 ttttgctacaacttttgggacaaccttgttgtgctctcttttcattgatcaaaaacaa 45202100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 3091900 - 3091844
Alignment:
Q  116 tttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||| ||||||||||| ||||||||  || ||||||||| |||||||||||||||||    
T  3091900 tttgatacaacttttgtgacaacttcttttttctctcttttcattggtcaaaaacaa 3091844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 35008018 - 35008069
Alignment:
Q  121 tacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||| |||||| ||||||| ||||||| |||||||||||| ||||    
T  35008018 tacaacttttgggacaaccttgttgtgctctcttttcattggtcaaacacaa 35008069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 118 - 172
Target Start/End: Complemental strand, 16463449 - 16463395
Alignment:
Q  118 tggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||| |||||  ||||||| ||||||| | |||||||||||||||    
T  16463449 tggtacaacttttgggacaatcttgttgtgctctcttcttattggtcaaaaacaa 16463395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 19523311 - 19523369
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||| |||||  |||| ||| |||||||||||| | |||||||||||||||    
T  19523311 attttggtacaatttttggtacaattttattgttctctctttttattggtcaaaaacaa 19523369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 44484574 - 44484624
Alignment:
Q  122 acaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||| | |||||||||||| ||||||||| | |||||||||||||||    
T  44484574 acaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaa 44484624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 24491588 - 24491645
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| |||||||||||||||||  || |||||||||||| | |||||| ||||||||    
T  24491588 ttttgatacaacttttgagacaatcttattgttctctcttcttattggttaaaaacaa 24491645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 27538843 - 27538900
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||||||||| | |||||| ||||||| || |||| |||||||||||||||||    
T  27538843 ttttgctacaactttcgggacaaccttgttgtgctttcttttcattggtcaaaaacaa 27538900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 32755842 - 32755781
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||  ||||||||||||||| | || || ||||||||| | |||||||||||||||    
T  32755842 accattttgtgacaacttttgagacagccttatttttctctcttttgattggtcaaaaacaa 32755781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 35203660 - 35203717
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||||| ||||| |||||| ||||||| || |||| |||||||||||||||||    
T  35203660 ttttgctacaatttttgggacaaccttgttgtgctatcttttcattggtcaaaaacaa 35203717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 11164288 - 11164344
Alignment:
Q  116 tttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||| ||||||||||| ||||||||  || ||||||||| |||||||| ||||||||    
T  11164288 tttgatacaacttttgtgacaacttcttttttctctcttttcattggttaaaaacaa 11164344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 13711216 - 13711164
Alignment:
Q  120 gtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||| ||||||||  || ||||||||| |||||||| ||||||||    
T  13711216 gtacaacttttgtgacaacttcttttttctctcttttcattggttaaaaacaa 13711164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 27529686 - 27529630
Alignment:
Q  116 tttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||| ||||||||| | |||||| ||||||| || |||| |||||||||||||||||    
T  27529686 tttgctacaactttcgggacaaccttgttgtgctttcttttcattggtcaaaaacaa 27529630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 6e-17; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 34976780 - 34976723
Alignment:
Q  111 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaa 168  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||    
T  34976780 accattttggtacaacctttgagataactttgttgttctctcttctcattggtcaaaa 34976723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 608571 - 608629
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    |||||||||||||| ||| |||||| ||||||||||||||| |||||||||||||||||    
T  608571 attttggtacaactgttgggacaaccttgttgttctctcttctcattggtcaaaaacaa 608629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 22422311 - 22422253
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||||||||  ||||||||||||||||||||| ||||| |||||||||||    
T  22422311 attttggtacaacttttggtacaactttgttgttctctcttctcattagtcaaaaacaa 22422253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 3335366 - 3335423
Alignment:
Q  112 ccattttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaa 169  Q
    |||||||| |||||  ||||||||||||||||||||||||||| |||||||| |||||    
T  3335366 ccattttgatacaatatttgagacaactttgttgttctctcttttcattggtaaaaaa 3335423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 7304016 - 7304073
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| |||||||||||||||||| |  |||||||||||| |||||||||||||||||    
T  7304016 ttttgatacaacttttgagacaacctcattgttctctcttctcattggtcaaaaacaa 7304073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 9395248 - 9395305
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||||||||||| |||||  ||||||| |||||||||||||||||||||||||    
T  9395248 ttttgctacaacttttgggacaatcttgttgtgctctcttatcattggtcaaaaacaa 9395305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 115 - 170
Target Start/End: Original strand, 6997461 - 6997516
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaac 170  Q
    ||||| ||||||||||| |||||| ||||||| ||||||| |||||||||||||||    
T  6997461 ttttgctacaacttttgggacaaccttgttgtgctctcttttcattggtcaaaaac 6997516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 2165211 - 2165268
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||||||||||| |||||| ||| ||| ||||||| |||||||||||||||||    
T  2165211 ttttgctacaacttttgtgacaaccttgatgtgctctcttttcattggtcaaaaacaa 2165268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 2176844 - 2176901
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||||||||||| |||||| ||| ||| ||||||| |||||||||||||||||    
T  2176844 ttttgctacaacttttgtgacaaccttgatgtgctctcttttcattggtcaaaaacaa 2176901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 134 - 172
Target Start/End: Original strand, 12151787 - 12151825
Alignment:
Q  134 acaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||||||||||| | |||||||||||||||    
T  12151787 acaactttgttgttctctcttcttattggtcaaaaacaa 12151825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 10557569 - 10557512
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| |||||||||||  ||||  ||||||| ||||||| |||||||||||||||||    
T  10557569 ttttgctacaacttttggaacaatcttgttgtactctcttttcattggtcaaaaacaa 10557512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 32135348 - 32135405
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||||||||||  |||||  ||||||| ||||||| |||||||||||||||||    
T  32135348 ttttgctacaacttttaggacaatcttgttgtgctctcttttcattggtcaaaaacaa 32135405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 16865671 - 16865635
Alignment:
Q  133 gacaactttgttgttctctcttatcattggtcaaaaa 169  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  16865671 gacaactttgttgtgctctcttttcattggtcaaaaa 16865635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 54572 - 54630
Alignment:
Q  114 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||  ||||||||||||||||||||||||||| | |||||||||||||||    
T  54572 attttggtacaatctttgagacaactttgttgttctctctttttattggtcaaaaacaa 54630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 3103 - 3046
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||||||||||| ||||||||| |||| ||||||| |||||||||||||||||    
T  3103 ttttgctacaacttttgggacaactttattgtgctctcttttcattggtcaaaaacaa 3046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 17198 - 17141
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||| ||||||||||| |||||| ||| ||| ||||||| |||||||||||||||||    
T  17198 ttttgctacaacttttgtgacaaccttgatgtgctctcttttcattggtcaaaaacaa 17141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 145207 - 145150
Alignment:
Q  115 ttttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaa 172  Q
    ||||||||||||||||| |||||| |||||||  |||||| | |||||||||||||||    
T  145207 ttttggtacaacttttgggacaaccttgttgtgttctcttcttattggtcaaaaacaa 145150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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