View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15074_high_10 (Length: 245)

Name: NF15074_high_10
Description: NF15074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15074_high_10
NF15074_high_10
[»] chr2 (21 HSPs)
chr2 (157-243)||(26897230-26897316)
chr2 (157-243)||(6856800-6856886)
chr2 (158-237)||(7559757-7559836)
chr2 (160-243)||(24286302-24286385)
chr2 (160-243)||(24292870-24292953)
chr2 (160-237)||(377698-377775)
chr2 (158-237)||(10160126-10160205)
chr2 (157-236)||(34070029-34070108)
chr2 (158-243)||(23068159-23068244)
chr2 (158-236)||(25375499-25375577)
chr2 (158-243)||(1284117-1284202)
chr2 (158-243)||(30344322-30344407)
chr2 (158-240)||(28855737-28855818)
chr2 (157-243)||(42248830-42248916)
chr2 (158-240)||(30658783-30658865)
chr2 (158-201)||(17327705-17327748)
chr2 (158-196)||(22845052-22845090)
chr2 (158-235)||(6297299-6297375)
chr2 (158-243)||(9785753-9785836)
chr2 (69-110)||(7269304-7269345)
chr2 (158-243)||(30635396-30635484)
[»] scaffold0327 (1 HSPs)
scaffold0327 (158-243)||(19628-19713)
[»] scaffold0205 (1 HSPs)
scaffold0205 (158-243)||(30870-30955)
[»] scaffold0132 (1 HSPs)
scaffold0132 (158-243)||(24702-24787)
[»] scaffold0357 (1 HSPs)
scaffold0357 (157-243)||(3752-3838)
[»] chr3 (36 HSPs)
chr3 (157-243)||(8223538-8223624)
chr3 (157-243)||(8197055-8197141)
chr3 (157-236)||(51922944-51923023)
chr3 (158-237)||(8070288-8070367)
chr3 (157-243)||(29831-29917)
chr3 (157-243)||(14425248-14425334)
chr3 (158-237)||(3034252-3034331)
chr3 (158-237)||(3693227-3693306)
chr3 (158-237)||(8888539-8888618)
chr3 (158-237)||(3673195-3673274)
chr3 (158-243)||(9706997-9707082)
chr3 (158-243)||(16749326-16749411)
chr3 (158-243)||(19776488-19776573)
chr3 (157-237)||(18350180-18350260)
chr3 (158-237)||(8883779-8883858)
chr3 (158-235)||(22758586-22758663)
chr3 (158-237)||(10585596-10585675)
chr3 (158-243)||(4106732-4106817)
chr3 (158-243)||(4110584-4110669)
chr3 (158-243)||(15965658-15965743)
chr3 (158-243)||(15969582-15969667)
chr3 (158-243)||(15973506-15973591)
chr3 (174-243)||(18699200-18699269)
chr3 (158-237)||(6595799-6595878)
chr3 (158-235)||(37438966-37439043)
chr3 (158-243)||(8488797-8488881)
chr3 (158-195)||(11997412-11997449)
chr3 (62-111)||(14264712-14264761)
chr3 (191-243)||(14671996-14672048)
chr3 (1-57)||(38052580-38052636)
chr3 (158-198)||(53358754-53358794)
chr3 (69-119)||(8004406-8004456)
chr3 (158-243)||(16055779-16055864)
chr3 (9-53)||(22238582-22238626)
chr3 (59-119)||(22754658-22754718)
chr3 (158-206)||(35456345-35456393)
[»] chr8 (21 HSPs)
chr8 (158-243)||(19393137-19393222)
chr8 (157-237)||(16066622-16066702)
chr8 (157-243)||(22104278-22104364)
chr8 (158-243)||(8330769-8330854)
chr8 (158-243)||(34818112-34818197)
chr8 (157-237)||(4582701-4582781)
chr8 (158-234)||(31449271-31449347)
chr8 (158-237)||(4237747-4237826)
chr8 (158-237)||(4242486-4242565)
chr8 (158-240)||(43302090-43302172)
chr8 (158-237)||(37772316-37772395)
chr8 (158-243)||(18861976-18862061)
chr8 (158-243)||(21384347-21384432)
chr8 (158-243)||(21387767-21387852)
chr8 (174-243)||(21827361-21827430)
chr8 (158-243)||(23915095-23915180)
chr8 (161-235)||(25367395-25367469)
chr8 (158-235)||(21411634-21411711)
chr8 (158-235)||(21806126-21806203)
chr8 (177-237)||(25733590-25733650)
chr8 (16-57)||(44007585-44007626)
[»] scaffold1910 (1 HSPs)
scaffold1910 (157-237)||(475-555)
[»] chr7 (31 HSPs)
chr7 (157-237)||(838837-838917)
chr7 (157-237)||(1204017-1204097)
chr7 (157-235)||(19096865-19096944)
chr7 (157-243)||(846013-846099)
chr7 (157-243)||(853390-853476)
chr7 (157-243)||(1211394-1211480)
chr7 (158-235)||(8954673-8954750)
chr7 (159-243)||(29727211-29727295)
chr7 (157-237)||(36477586-36477659)
chr7 (158-235)||(8076661-8076738)
chr7 (158-243)||(27256840-27256925)
chr7 (158-243)||(40864769-40864854)
chr7 (158-243)||(14259609-14259694)
chr7 (158-243)||(16459787-16459872)
chr7 (158-243)||(18426530-18426615)
chr7 (158-235)||(20485198-20485275)
chr7 (158-235)||(20488559-20488636)
chr7 (158-237)||(9650366-9650445)
chr7 (174-243)||(14928058-14928127)
chr7 (174-243)||(15351524-15351593)
chr7 (158-243)||(45169337-45169422)
chr7 (1-58)||(48850479-48850536)
chr7 (182-237)||(47102148-47102203)
chr7 (9-58)||(4996415-4996464)
chr7 (9-57)||(4997179-4997227)
chr7 (62-110)||(11561527-11561575)
chr7 (158-193)||(9008810-9008845)
chr7 (62-111)||(2912107-2912156)
chr7 (158-243)||(32302442-32302527)
chr7 (158-218)||(1043847-1043907)
chr7 (164-196)||(11289434-11289466)
[»] chr5 (21 HSPs)
chr5 (158-237)||(8770852-8770931)
chr5 (157-243)||(26869719-26869805)
chr5 (157-243)||(21826826-21826912)
chr5 (158-237)||(557305-557384)
chr5 (158-237)||(562077-562156)
chr5 (158-237)||(32460950-32461029)
chr5 (158-237)||(36936917-36936996)
chr5 (158-237)||(36941671-36941750)
chr5 (158-237)||(41997273-41997352)
chr5 (158-237)||(42002042-42002121)
chr5 (158-243)||(10754053-10754138)
chr5 (158-235)||(13300896-13300973)
chr5 (158-243)||(31732140-31732225)
chr5 (158-237)||(21323382-21323461)
chr5 (158-235)||(23976993-23977070)
chr5 (158-235)||(3666526-3666601)
chr5 (158-224)||(15395246-15395312)
chr5 (158-243)||(36949388-36949473)
chr5 (157-206)||(41099170-41099219)
chr5 (158-237)||(24435589-24435668)
chr5 (158-198)||(12044536-12044576)
[»] scaffold0019 (1 HSPs)
scaffold0019 (157-243)||(30287-30373)
[»] scaffold0015 (2 HSPs)
scaffold0015 (157-243)||(193672-193758)
scaffold0015 (157-243)||(187986-188072)
[»] chr6 (24 HSPs)
chr6 (157-243)||(26981198-26981284)
chr6 (157-243)||(27073588-27073674)
chr6 (157-227)||(14073754-14073824)
chr6 (158-240)||(24588584-24588666)
chr6 (157-243)||(18387535-18387621)
chr6 (158-243)||(16625019-16625104)
chr6 (158-235)||(6112165-6112242)
chr6 (158-235)||(19772418-19772495)
chr6 (158-237)||(15704317-15704396)
chr6 (158-243)||(22806954-22807039)
chr6 (174-243)||(22949835-22949904)
chr6 (174-243)||(22953791-22953860)
chr6 (174-243)||(23872279-23872348)
chr6 (174-243)||(23876235-23876304)
chr6 (158-243)||(31477110-31477195)
chr6 (158-237)||(27324467-27324544)
chr6 (160-243)||(2077415-2077498)
chr6 (177-243)||(16760985-16761051)
chr6 (9-58)||(19802531-19802580)
chr6 (9-54)||(19803258-19803303)
chr6 (158-207)||(15645337-15645386)
chr6 (9-53)||(1634949-1634993)
chr6 (164-196)||(2862884-2862916)
chr6 (158-206)||(15640950-15640998)
[»] chr1 (28 HSPs)
chr1 (157-243)||(14804107-14804193)
chr1 (157-231)||(14819587-14819661)
chr1 (158-243)||(22428602-22428686)
chr1 (160-243)||(26198961-26199044)
chr1 (164-235)||(16836698-16836769)
chr1 (173-243)||(2367646-2367716)
chr1 (173-243)||(2384667-2384737)
chr1 (158-237)||(1067090-1067169)
chr1 (158-237)||(40232794-40232873)
chr1 (158-243)||(19725312-19725395)
chr1 (158-237)||(13893925-13894004)
chr1 (158-237)||(19726975-19727053)
chr1 (157-243)||(21498254-21498340)
chr1 (158-243)||(39243429-39243514)
chr1 (158-243)||(39246984-39247069)
chr1 (158-235)||(41097364-41097441)
chr1 (158-237)||(3094698-3094777)
chr1 (158-243)||(1924460-1924545)
chr1 (158-243)||(20923474-20923559)
chr1 (159-231)||(33055651-33055723)
chr1 (158-240)||(17213850-17213932)
chr1 (158-232)||(41387381-41387455)
chr1 (172-237)||(26319593-26319658)
chr1 (157-206)||(52100627-52100676)
chr1 (1-56)||(37560774-37560829)
chr1 (9-58)||(31868332-31868381)
chr1 (158-192)||(8267258-8267292)
chr1 (62-111)||(32306320-32306369)
[»] chr4 (30 HSPs)
chr4 (158-243)||(9185090-9185175)
chr4 (158-243)||(14868474-14868559)
chr4 (158-243)||(14877375-14877460)
chr4 (157-243)||(15225768-15225854)
chr4 (158-243)||(9190955-9191040)
chr4 (158-231)||(14899022-14899095)
chr4 (157-231)||(26034803-26034877)
chr4 (158-243)||(34561027-34561112)
chr4 (158-243)||(7902517-7902602)
chr4 (174-243)||(10713543-10713612)
chr4 (174-243)||(10927313-10927382)
chr4 (158-243)||(12488401-12488486)
chr4 (158-243)||(14953461-14953546)
chr4 (158-243)||(15011222-15011307)
chr4 (158-234)||(31297901-31297977)
chr4 (158-237)||(3997468-3997547)
chr4 (158-237)||(13521391-13521470)
chr4 (173-235)||(41817393-41817455)
chr4 (158-232)||(47575276-47575350)
chr4 (158-243)||(8660809-8660894)
chr4 (174-243)||(25690597-25690666)
chr4 (62-119)||(31323526-31323583)
chr4 (158-206)||(39320202-39320250)
chr4 (1-58)||(53687700-53687757)
chr4 (191-243)||(18023224-18023276)
chr4 (62-113)||(10011709-10011760)
chr4 (62-113)||(10018850-10018901)
chr4 (158-196)||(32545533-32545571)
chr4 (158-196)||(52742630-52742668)
chr4 (158-195)||(55073797-55073834)
[»] scaffold0004 (1 HSPs)
scaffold0004 (157-243)||(199795-199879)
[»] scaffold0182 (1 HSPs)
scaffold0182 (158-237)||(9286-9365)
[»] scaffold0041 (1 HSPs)
scaffold0041 (158-243)||(35110-35195)
[»] scaffold0034 (1 HSPs)
scaffold0034 (158-243)||(121169-121254)
[»] scaffold0044 (2 HSPs)
scaffold0044 (157-243)||(81161-81247)
scaffold0044 (157-231)||(64775-64849)
[»] scaffold0572 (1 HSPs)
scaffold0572 (158-243)||(10382-10467)
[»] scaffold0155 (1 HSPs)
scaffold0155 (184-237)||(22284-22337)
[»] scaffold0144 (1 HSPs)
scaffold0144 (158-243)||(7480-7565)
[»] scaffold0060 (2 HSPs)
scaffold0060 (158-243)||(47379-47464)
scaffold0060 (158-243)||(52323-52408)
[»] scaffold0011 (1 HSPs)
scaffold0011 (158-243)||(127006-127091)
[»] scaffold0009 (1 HSPs)
scaffold0009 (158-237)||(71740-71820)
[»] scaffold0431 (1 HSPs)
scaffold0431 (158-235)||(14883-14960)
[»] scaffold0415 (1 HSPs)
scaffold0415 (158-243)||(1091-1176)
[»] scaffold0229 (1 HSPs)
scaffold0229 (158-243)||(10832-10917)
[»] scaffold0157 (1 HSPs)
scaffold0157 (158-243)||(31991-32076)
[»] scaffold0141 (1 HSPs)
scaffold0141 (158-243)||(13418-13503)
[»] scaffold0124 (1 HSPs)
scaffold0124 (158-243)||(21392-21477)
[»] scaffold0070 (2 HSPs)
scaffold0070 (158-243)||(59029-59114)
scaffold0070 (158-190)||(63284-63316)
[»] scaffold0452 (1 HSPs)
scaffold0452 (158-234)||(12374-12450)
[»] scaffold0061 (1 HSPs)
scaffold0061 (158-237)||(49390-49469)
[»] scaffold0017 (1 HSPs)
scaffold0017 (158-237)||(149165-149244)
[»] scaffold0628 (1 HSPs)
scaffold0628 (158-235)||(6999-7076)
[»] scaffold0575 (1 HSPs)
scaffold0575 (158-243)||(5287-5372)
[»] scaffold0031 (1 HSPs)
scaffold0031 (174-243)||(35433-35502)
[»] scaffold0020 (1 HSPs)
scaffold0020 (158-237)||(646-725)
[»] scaffold0018 (1 HSPs)
scaffold0018 (174-237)||(21916-21979)
[»] scaffold0292 (1 HSPs)
scaffold0292 (158-237)||(7776-7855)


Alignment Details
Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 26897316 - 26897230
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26897316 ctattagttgtgaagtttctctataaatagagggctcacacaatgcattctggactccgaaattcacagttgatgcttcctgtgctt 26897230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 6856886 - 6856800
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||||||||| |||||    
T  6856886 ctattagttgtgaaatttctctataaatagagagctcacacaatacattctggggaccgaaattcacagttgatgcttcctgtgctt 6856800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 7559757 - 7559836
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||    
T  7559757 tattagttgtgaattttctctataaatagagagctcacacaatgcattctggacacttaaattcacagttgatgcttcct 7559836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 24286302 - 24286385
Alignment:
Q  160 ttagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||| |||||    
T  24286302 ttagttgtgaagtttctctataaatagagggctcacacaatgcattcaggaccccgaaattcacagttgatgcttcctgtgctt 24286385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 24292870 - 24292953
Alignment:
Q  160 ttagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||| |||||    
T  24292870 ttagttgtgaagtttctctataaatagagggctcacacaatgcattcaggaccccgaaattcacagttgatgcttcctgtgctt 24292953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 160 - 237
Target Start/End: Original strand, 377698 - 377775
Alignment:
Q  160 ttagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||| ||| ||||||||||||||||||||| ||||||||  |||| |||||||||||||||||||||||||    
T  377698 ttagttgtgaagtttttctataaatagagagctcacataatgcattacggacaccgaaattcacagttgatgcttcct 377775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 10160126 - 10160205
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| |||||||| |||||||||||||||||| |||||||   || |||||||||||||||||||||||||    
T  10160126 tattagttgtgaactttctctacaaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcct 10160205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 34070108 - 34070029
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcc 236  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||   || ||||||| ||||||||||||||||    
T  34070108 ctattagttgtgaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacagttgatgcttcc 34070029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 23068159 - 23068244
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || ||||||||||||||||||||||||| |||||    
T  23068159 tattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 23068244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 236
Target Start/End: Complemental strand, 25375577 - 25375499
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcc 236  Q
    ||||||||||||| ||||||||||||||||||||| ||||| ||||||||  || | ||||||||||||||||| ||||    
T  25375577 tattagttgtgaattttctctataaatagagagcttacacagtgcattctacacactgaaattcacagttgatgattcc 25375499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 1284202 - 1284117
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || |||||||||||||||||| |||||| |||||    
T  1284202 tattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 1284117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 30344322 - 30344407
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || |||||||||||||||||| |||||| |||||    
T  30344322 tattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 30344407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 28855818 - 28855737
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatg 240  Q
    ||||||||||||| |||| |||||||||||||||||||| | |||||||   || ||||||||||||||||||| ||||||||    
T  28855818 tattagttgtgaa-tttccctataaatagagagctcacaaagtgcattcgacacaccgaaattcacagttgatgattcctatg 28855737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 42248916 - 42248830
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||  ||| ||||||||||||||||| |||||||||||||||||   || ||||||| |||| |||||||||||| |||||    
T  42248916 ctattagttcggaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacaattgatgcttcctgtgctt 42248830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 30658865 - 30658783
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatg 240  Q
    ||||||||||||| |||||| |||||||||||||||||||| |||||||   |  |  |||||||||||||||||||| ||||    
T  30658865 tattagttgtgaactttctccataaatagagagctcacacagtgcattccacatacacaaattcacagttgatgcttcatatg 30658783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 201
Target Start/End: Complemental strand, 17327748 - 17327705
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatg 201  Q
    |||||||||| || ||||||||||||||||||||||||||||||    
T  17327748 tattagttgtaaattttctctataaatagagagctcacacaatg 17327705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 196
Target Start/End: Complemental strand, 22845090 - 22845052
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcaca 196  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  22845090 tattagttgtgaattttctctataaatagagagctcaca 22845052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 6297299 - 6297375
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttc 235  Q
    |||||||||| || |||||||| |||||||||||||||||| | | ||||  || | |||||||||||||||||||||    
T  6297299 tattagttgtcaactttctcta-aaatagagagctcacacagttctttctatacacagaaattcacagttgatgcttc 6297375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 9785836 - 9785753
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | || ||||||||||||| ||||||   |||||| |  || ||||||||||||||||||||||||| |||||    
T  9785836 tattagttgtaaactatccctataaatagagaactcacag--tgcattttacacaccgaaattcacagttgatgcttcctgtgctt 9785753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 110
Target Start/End: Complemental strand, 7269345 - 7269304
Alignment:
Q  69 cccaacagattttgctcgtgcccaactaaaataccgaaaata 110  Q
    ||||||| |||||||||| |||||||| ||||||||||||||    
T  7269345 cccaacacattttgctcgcgcccaactgaaataccgaaaata 7269304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 30635484 - 30635396
Alignment:
Q  158 tattagttgtgaaatttctctataaatag--agagctcacacaatgcattctggactccgaaa-ttcacagttgatgcttcctatgctt 243  Q
    ||||||||||||| ||||| ||||||||   |||||||||| | |||||| |  || |||||| ||||||||||||||||||| |||||    
T  30635484 tattagttgtgaattttctttataaatatttagagctcacaaagtgcattttacacaccgaaaattcacagttgatgcttcctgtgctt 30635396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 19628 - 19713
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  19628 tattagttgtgaagtttctctataaatagagagctcacacaatgcattctggaccccgaaattcacagttgatgcttcctgtgctt 19713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 30955 - 30870
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||    
T  30955 tattagttgtgaaatttctctataaatagagagctcacacaatgcattcaagacaccgaaattcacagttgatgcttcctatgctt 30870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 24702 - 24787
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||    
T  24702 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggaccccgaaattcacagttgatgattcctgtgctt 24787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 3752 - 3838
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||    
T  3752 ctattagttgtgaagtttctctataaatagagagctcacacaatgcattctgaaccccgaaattcacagttgatgcttcctgtgctt 3838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 8223624 - 8223538
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  8223624 ctattagttgtgaagtttctctataaatagagggctcacacaatgcattctggaccccgaaattcacagttgatgcttcctgtgctt 8223538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 8197141 - 8197055
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||| |||||    
T  8197141 ctattagttgtgaagtttctctataaatagagggctcacacaatgcattatggaccccgaaattcacagttgatgcttcctgtgctt 8197055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 51923023 - 51922944
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcc 236  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||    
T  51923023 ctattagttgtgaagtttctctataaatagagggctcacacaatgcattctggacaccgaaattcacagttgatgattcc 51922944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 8070367 - 8070288
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||  ||| |||||||||||||||||||||||||    
T  8070367 tattagttgtgaactttctctataaatagagagctcacacagtgcattccagacaccgaaattcacagttgatgcttcct 8070288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 29917 - 29831
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||| |||| ||||||||||||| ||||| ||||| |||||    
T  29917 ctattagttgtgaaatttttctataaatagagggctcacacaatgcattcaggacaccgaaattcacagatgatgattcctgtgctt 29831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 14425248 - 14425334
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    ||||||| |||||| |||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||| ||||| |||||    
T  14425248 ctattagctgtgaagtttctctagaaatagagagctcacacaatgcattctgtacaccgaaattcacagttgatgattcctgtgctt 14425334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 3034331 - 3034252
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||   || |||||||||||||||||||||||||    
T  3034331 tattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcct 3034252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 3693306 - 3693227
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||   || |||||||||||||||||||||||||    
T  3693306 tattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcct 3693227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 8888618 - 8888539
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||   || |||||||||||||||||||||||||    
T  8888618 tattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcct 8888539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 3673274 - 3673195
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||   || | |||||||||||||||||||||||    
T  3673274 tattagttgtgaactttctctataaatagagagctcacacagtgcattccacacactgaaattcacagttgatgcttcct 3673195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 9706997 - 9707082
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || ||||||||||||||||||||||||| |||||    
T  9706997 tattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 9707082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 16749326 - 16749411
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || ||||||||||||||||||||||||| |||||    
T  16749326 tattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 16749411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 19776573 - 19776488
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || ||||||||||||||||||||||||| |||||    
T  19776573 tattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 19776488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 18350180 - 18350260
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    |||||||||| ||| ||||||||||||||||| |||||||||||||||||   || ||||||| |||||||||||||||||    
T  18350180 ctattagttgcgaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacagttgatgcttcct 18350260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 8883858 - 8883779
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| |||||||||||||| |||||| ||||| |||||||   || |||||||||||||||||||||||||    
T  8883858 tattagttgtgaactttctctataaataaagagcttacacagtgcattccacacaccgaaattcacagttgatgcttcct 8883779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 22758586 - 22758663
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttc 235  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || |||||||||||||||||||||||    
T  22758586 tattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttc 22758663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 10585596 - 10585675
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||| ||    || || ||||||||||||||||||||||    
T  10585596 tattagttgtgaactttctctataaatagagagctcacacagtgctttacatacaccaaaattcacagttgatgcttcct 10585675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 4106732 - 4106817
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||| ||| ||||||||  || |||||||||||||||||| |||||| |||||    
T  4106732 tattagttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 4106817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 4110584 - 4110669
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||| ||| ||||||||  || |||||||||||||||||| |||||| |||||    
T  4110584 tattagttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 4110669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 15965743 - 15965658
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||| ||| ||||||||  || |||||||||||||||||| |||||| |||||    
T  15965743 tattagttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 15965658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 15969667 - 15969582
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||| ||| ||||||||  || |||||||||||||||||| |||||| |||||    
T  15969667 tattagttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 15969582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 15973591 - 15973506
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||| ||| ||||||||  || |||||||||||||||||| |||||| |||||    
T  15973591 tattagttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 15973506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 18699200 - 18699269
Alignment:
Q  174 tctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||||| |||||||| ||||||||  || |||||||||||| |||||||||||| |||||    
T  18699200 tctctataaatagagaactcacacagtgcattctacacaccgaaattcacacttgatgcttcctgtgctt 18699269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 6595799 - 6595878
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| ||||||||||||||||||||||||| | |||||| |  ||  | ||||||| ||||||||||||||    
T  6595799 tattagttgtgaattttctctataaatagagagctcacagagtgcattttacacatcaaaattcatagttgatgcttcct 6595878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 37438966 - 37439043
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttc 235  Q
    |||||||||| || | |||||||||||||||| |||||||| | ||||||  || |||||||||||||||||| ||||    
T  37438966 tattagttgtaaattatctctataaatagagaactcacacagttcattctacacgccgaaattcacagttgatacttc 37439043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 8488797 - 8488881
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| | ||||||  || |||||| | |||||||||||||||| |||||    
T  8488797 tattagttgtaaactatctctataaatagagaactcacacagt-cattctacacaccgaaagttacagttgatgcttcctgtgctt 8488881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 11997412 - 11997449
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcac 195  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  11997412 tattagttgtgaattttctctataaatagagagctcac 11997449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 14264712 - 14264761
Alignment:
Q  62 ctctttacccaacagattttgctcgtgcccaactaaaataccgaaaatac 111  Q
    |||||||| ||||| |||||||||| ||| ||||||||||||||||||||    
T  14264712 ctctttactcaacatattttgctcgcgcctaactaaaataccgaaaatac 14264761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 14672048 - 14671996
Alignment:
Q  191 ctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||| ||||||||  || ||||||||||||||||||||||||| |||||    
T  14672048 ctcacacactgcattctacacaccgaaattcacagttgatgcttcctgtgctt 14671996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 38052636 - 38052580
Alignment:
Q  1 aaaaatggcattttcatatgtcaatattacgttttgaatgtcaaaaaagcaattttc 57  Q
    ||||||| ||||| ||||||| ||||| ||||||| ||||||| |||||||||||||    
T  38052636 aaaaatgtcatttccatatgttaatatgacgttttcaatgtcagaaaagcaattttc 38052580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 53358794 - 53358754
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacaca 198  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  53358794 tattagttgtgaactttctttataaatagagagctcacaca 53358754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 119
Target Start/End: Complemental strand, 8004456 - 8004406
Alignment:
Q  69 cccaacagattttgctcgtgcccaactaaaataccgaaaatactcatgcgt 119  Q
    ||||||| |||||||||| |||||||| ||||| ||||||||||| |||||    
T  8004456 cccaacacattttgctcgcgcccaactgaaatatcgaaaatactcttgcgt 8004406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 16055864 - 16055779
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    ||||||| | ||| ||||||||||||| ||| |||| || |||||||| |  || ||||||  ||||||||||||||||| |||||    
T  16055864 tattagtagagaactttctctataaatggagggctctcaaaatgcatttttcacgccgaaaaacacagttgatgcttcctgtgctt 16055779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 22238626 - 22238582
Alignment:
Q  9 cattttcatatgtcaatattacgttttgaatgtcaaaaaagcaat 53  Q
    |||||||||| |||||||| ||||| | |||||||||||||||||    
T  22238626 cattttcataagtcaatatgacgttctaaatgtcaaaaaagcaat 22238582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 22754658 - 22754718
Alignment:
Q  59 ccactctttacccaacagattttgctcgtgcccaactaaaataccgaaaatactcatgcgt 119  Q
    ||||||||  ||||||| |||||||||| ||  ||||| ||||| ||||||||||||||||    
T  22754658 ccactcttctcccaacatattttgctcgcgcgtaactagaatactgaaaatactcatgcgt 22754718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 35456345 - 35456393
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattc 206  Q
    ||||||||||||| ||||||||||||||||||  ||||| | |||||||    
T  35456345 tattagttgtgaattttctctataaatagagaattcacatagtgcattc 35456393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 19393137 - 19393222
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||| |||||    
T  19393137 tattagttgtgaaatttctctataaatagagatctcacacaatgcattatggaccccgaaattcacagttgatgcttcctgtgctt 19393222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 16066622 - 16066702
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||    
T  16066622 ctattagttgtgaagtttctctataaatagagagctcacacaatgcactatggacaccgaaattcacagttgatgcttcct 16066702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 22104364 - 22104278
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||| ||||| |||||    
T  22104364 ctattagctgtgaagtttctctataaatagagagctcacacaatgcattctgtacaccgaaattcacatttgatgattcctgtgctt 22104278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 8330769 - 8330854
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||| |||   || ||||||||||||||||||||||||| |||||    
T  8330769 tattagttgtgaactttctctataaatagagagctcacacagtgctttccatacaccgaaattcacagttgatgcttcctgtgctt 8330854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 34818112 - 34818197
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    ||||||||||||| ||||||||||||||||||| ||||||| ||| ||| | || ||||||||||||||||||||||||| |||||    
T  34818112 tattagttgtgaactttctctataaatagagagttcacacagtgctttcggtacaccgaaattcacagttgatgcttcctgtgctt 34818197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 4582701 - 4582781
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||   || ||||||| |||||||||||||||||    
T  4582701 ctattagttgtgaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacagttgatgcttcct 4582781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 31449271 - 31449347
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgctt 234  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||   || ||||||||||||||||||||||    
T  31449271 tattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgctt 31449347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 4237747 - 4237826
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||    | |||||||||||||||||||||||||    
T  4237747 tattagttgtgaactttctctataaatagagagctcacacagtgcattccacgcaccgaaattcacagttgatgcttcct 4237826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 4242486 - 4242565
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||    | |||||||||||||||||||||||||    
T  4242486 tattagttgtgaactttctctataaatagagagctcacacagtgcattccacgcaccgaaattcacagttgatgcttcct 4242565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 43302090 - 43302172
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatg 240  Q
    ||||| ||||||| ||||||||||||||||||||||||||| |||||||   ||  |||||||||||||||||||||||||||    
T  43302090 tattacttgtgaactttctctataaatagagagctcacacagtgcattccacacatcgaaattcacagttgatgcttcctatg 43302172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 37772395 - 37772316
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||| ||    || |||||||||||||||||||||||||    
T  37772395 tattagttgtgaactttctctataaatagagagctcacacagtgctttacatacaccgaaattcacagttgatgcttcct 37772316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 18861976 - 18862061
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || |||||||||||||||||| |||||| |||||    
T  18861976 tattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 18862061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 21384432 - 21384347
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| |||||| |  || ||||||||||||||||||||||||| |||||    
T  21384432 tattagttgtaaactatctctataaatagagaactcacacagtgcattatacacaccgaaattcacagttgatgcttcctgtgctt 21384347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 21387852 - 21387767
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| |||||| |  || ||||||||||||||||||||||||| |||||    
T  21387852 tattagttgtaaactatctctataaatagagaactcacacagtgcattatacacaccgaaattcacagttgatgcttcctgtgctt 21387767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 21827361 - 21827430
Alignment:
Q  174 tctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||||| |||||||| ||||||||  || |||||||||||||||||| |||||| |||||    
T  21827361 tctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 21827430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 23915180 - 23915095
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | || ||||||||||||| ||| |||| ||||||||  || ||||||||||||||||||||||||| |||||    
T  23915180 tattagttgtaaactatccctataaatagagaactctcacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 23915095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 25367395 - 25367469
Alignment:
Q  161 tagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttc 235  Q
    |||||||||| ||||||||||||||||||| ||||||| ||| |||   || |||||||||||| ||||||||||    
T  25367395 tagttgtgaactttctctataaatagagagttcacacagtgctttccatacaccgaaattcacaattgatgcttc 25367469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 21411711 - 21411634
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttc 235  Q
    |||||||||| || | |||||||||||||||| ||| || | ||||||||  || |||||||||||||||||||||||    
T  21411711 tattagttgtaaactatctctataaatagagaactcgcatagtgcattctacacaccgaaattcacagttgatgcttc 21411634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 21806203 - 21806126
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttc 235  Q
    |||||||||| || | |||||||||||||||| ||| || | ||||||||  || |||||||||||||||||||||||    
T  21806203 tattagttgtaaactatctctataaatagagaactcgcatagtgcattctacacaccgaaattcacagttgatgcttc 21806126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 25733590 - 25733650
Alignment:
Q  177 ctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| |||||| | ||||||||  || |||||||||||||||||||||||||    
T  25733590 ctataaatagagaactcacaaagtgcattctacacaccgaaattcacagttgatgcttcct 25733650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 44007585 - 44007626
Alignment:
Q  16 atatgtcaatattacgttttgaatgtcaaaaaagcaattttc 57  Q
    |||||||||||| | |||||||||||||||||| ||||||||    
T  44007585 atatgtcaatatgatgttttgaatgtcaaaaaaacaattttc 44007626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1910 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold1910
Description:

Target: scaffold1910; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 157 - 237
Target Start/End: Complemental strand, 555 - 475
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  555 ctattagttgtgaagtttctctataaatagagagctcacacaatgcattctggataccgaaattcacagttgatgcttcct 475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 4e-31; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 838837 - 838917
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  838837 ctattagttgcgaaatttctctataaatagagagctcacacaatgcattctggaccccgaaattcacggttgatgcttcct 838917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 1204017 - 1204097
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  1204017 ctattagttgcgaaatttctctataaatagagagctcacacaatgcattctggaccccgaaattcacggttgatgcttcct 1204097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 19096944 - 19096865
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccg-aaattcacagttgatgcttc 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  19096944 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggaccccgaaaattcacagttgatgcttc 19096865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 846013 - 846099
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||  ||||||||||||| |||||    
T  846013 ctattagttgtgaaatttctctataaatagagagttcacacaatgcattctagaccccgaaattcatggttgatgcttcctgtgctt 846099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 853390 - 853476
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||  ||||||||||||| |||||    
T  853390 ctattagttgtgaaatttctctataaatagagagttcacacaatgcattctagaccccgaaattcatggttgatgcttcctgtgctt 853476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 1211394 - 1211480
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||  ||||||||||||| |||||    
T  1211394 ctattagttgtgaaatttctctataaatagagagttcacacaatgcattctagaccccgaaattcatggttgatgcttcctgtgctt 1211480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 8954673 - 8954750
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttc 235  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| | || ||||||||| |||||||||||||    
T  8954673 tattagttgtgaagtttctctataaatagagagctcacacaatgcattccgaaccccgaaattcccagttgatgcttc 8954750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 29727211 - 29727295
Alignment:
Q  159 attagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||| ||||||||||||||||||||||||||  |||||||||||| || |||||||||||||||| ||||| |||||    
T  29727211 attagttgtgaattttctctataaatagagagctcacacggtgcattctggacaccaaaattcacagttgatgtttcctgtgctt 29727295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 237
Target Start/End: Complemental strand, 36477659 - 36477586
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||       || |||||||||||||||||||||||||    
T  36477659 ctattagttgtgaaatttctctataaatagagagctcacacaatgc-------acaccgaaattcacagttgatgcttcct 36477586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 8076738 - 8076661
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttc 235  Q
    |||||| |||||| ||||||||||||||||||||||||||| |||||||   || |||||||||||||||||||||||    
T  8076738 tattagatgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttc 8076661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 27256925 - 27256840
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    ||||||||||||| ||||||||||||||||||||||||| | ||| |||   || ||||||||||||||||||||||||| |||||    
T  27256925 tattagttgtgaactttctctataaatagagagctcacatagtgctttcgatacaccgaaattcacagttgatgcttcctgtgctt 27256840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 40864769 - 40864854
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    ||||||||||||| ||||||||||||||||||||||||||| | | |||   || ||||||||||||||||||||||||| |||||    
T  40864769 tattagttgtgaactttctctataaatagagagctcacacagtactttcgatacaccgaaattcacagttgatgcttcctgtgctt 40864854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 14259694 - 14259609
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  |||  ||||||||||||||||||||||| |||||    
T  14259694 tattagttgtaaactatctctataaatagagaactcacacagtgcattctacactttgaaattcacagttgatgcttcctgtgctt 14259609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 16459787 - 16459872
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | || ||||||||||||| |||||||| ||||||||  || ||||||||||||||||||||||||| |||||    
T  16459787 tattagttgtaaactatccctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 16459872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 18426615 - 18426530
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || |||||||||||||||||| |||||| |||||    
T  18426615 tattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 18426530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 20485275 - 20485198
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttc 235  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || |||||||||||||||||||||||    
T  20485275 tattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttc 20485198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 20488636 - 20488559
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttc 235  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || |||||||||||||||||||||||    
T  20488636 tattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttc 20488559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 9650366 - 9650445
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| ||| ||||||||||||||||||||||| |||||||   |   ||||||||||||||||||||||||    
T  9650366 tattagttgtgaactttatctataaatagagagctcacacagtgcattccacaaatcgaaattcacagttgatgcttcct 9650445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 14928058 - 14928127
Alignment:
Q  174 tctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||||  |||||||| ||||||||  || ||||||||||||||||||||||||| |||||    
T  14928058 tctctataaatagaggactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 14928127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 15351524 - 15351593
Alignment:
Q  174 tctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||||  |||||||| ||||||||  || ||||||||||||||||||||||||| |||||    
T  15351524 tctctataaatagaggactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 15351593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 45169337 - 45169422
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| | ||||||  || |||||||||||||||||| |||||| |||||    
T  45169337 tattagttgtaaattatctctataaatagagaactcacacagttcattctacacaccgaaattcacagttgatacttcctgtgctt 45169422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 48850536 - 48850479
Alignment:
Q  1 aaaaatggcattttcatatgtcaatattacgttttgaatgtcaaaaaagcaattttct 58  Q
    ||||||| ||||||||| ||||||||| ||||||||||||||| ||| ||||||||||    
T  48850536 aaaaatgtcattttcatgtgtcaatataacgttttgaatgtcagaaatgcaattttct 48850479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 237
Target Start/End: Complemental strand, 47102203 - 47102148
Alignment:
Q  182 aatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||||||| |||||||   || |||||||||||||||||||||||||    
T  47102203 aatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcct 47102148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 4996464 - 4996415
Alignment:
Q  9 cattttcatatgtcaatattacgttttgaatgtcaaaaaagcaattttct 58  Q
    ||||||||| ||||||||| ||||||||||||||| ||||||||| ||||    
T  4996464 cattttcatgtgtcaatatgacgttttgaatgtcagaaaagcaatcttct 4996415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 4997179 - 4997227
Alignment:
Q  9 cattttcatatgtcaatattacgttttgaatgtcaaaaaagcaattttc 57  Q
    ||||| ||| ||||||||| | |||||||||||||||||||||||||||    
T  4997179 catttccatgtgtcaatatgaagttttgaatgtcaaaaaagcaattttc 4997227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 11561575 - 11561527
Alignment:
Q  62 ctctttacccaacagattttgctcgtgcccaactaaaataccgaaaata 110  Q
    ||||||| |||||| |||||||||| |||||||| ||||||||||||||    
T  11561575 ctctttagccaacatattttgctcgcgcccaactgaaataccgaaaata 11561527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 193
Target Start/End: Complemental strand, 9008845 - 9008810
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctc 193  Q
    ||||||||||||| ||||||||||||||||||||||    
T  9008845 tattagttgtgaattttctctataaatagagagctc 9008810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 2912107 - 2912156
Alignment:
Q  62 ctctttacccaacagattttgctcgtgcccaactaaaataccgaaaatac 111  Q
    |||||||||||||| |||||||| | |||||||||||||||  |||||||    
T  2912107 ctctttacccaacacattttgcttgcgcccaactaaaatacttaaaatac 2912156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 32302527 - 32302442
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||| ||| || |||   ||||||||  || ||||||||||||||||||| ||||| |||||    
T  32302527 tattagttgtaaactatctctataaatatagaactgacatggtgcattctacacaccgaaattcacagttgatgtttcctgtgctt 32302442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 1043907 - 1043847
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaa 218  Q
    ||||| ||||||| |||||||||||||| |||||| ||| ||| ||||||| || ||||||    
T  1043907 tattaattgtgaattttctctataaataaagagctgacataattcattctgcacaccgaaa 1043847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 11289434 - 11289466
Alignment:
Q  164 ttgtgaaatttctctataaatagagagctcaca 196  Q
    |||||||||||||||||||||| ||||||||||    
T  11289434 ttgtgaaatttctctataaatatagagctcaca 11289466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 8770931 - 8770852
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  8770931 tattagttgtgaattttctctataaatagagagctcacacaatgcattctggacactgaaattcacagttgatgcttcct 8770852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 26869719 - 26869805
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||    
T  26869719 ctattagctgtgaagtttctctataaatagagagctcacacaatgcattctgtacaccgaaattcacagttgatgcttcctgtgctt 26869805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 21826912 - 21826826
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||| ||||| |||||    
T  21826912 ctattagctgtgaagtttctctataaatagagagctcacacaatgcattctacaccccgaaattcacagttgatgattcctgtgctt 21826826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 557384 - 557305
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||   || |||||||||||||||||||||||||    
T  557384 tattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcct 557305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 562156 - 562077
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||   || |||||||||||||||||||||||||    
T  562156 tattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcct 562077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 32460950 - 32461029
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||   || |||||||||||||||||||||||||    
T  32460950 tattagttgtgaactttatctataaatagagagctcacacaatgcattccatacaccgaaattcacagttgatgcttcct 32461029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 36936917 - 36936996
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||   || |||||||||||||||||||||||||    
T  36936917 tattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcct 36936996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 36941671 - 36941750
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||   || |||||||||||||||||||||||||    
T  36941671 tattagttgtgaactttctctataaatagagagctcacacagtgcattccatacaccgaaattcacagttgatgcttcct 36941750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 41997352 - 41997273
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||   || |||||||||||||||||||||||||    
T  41997352 tattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcct 41997273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 42002121 - 42002042
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||   || |||||||||||||||||||||||||    
T  42002121 tattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcct 42002042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 10754138 - 10754053
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || ||||||||||||||||||||||||| |||||    
T  10754138 tattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 10754053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 13300896 - 13300973
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttc 235  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||| |||   || |||||||||||||||||||||||    
T  13300896 tattagttgtgaactttctctataaatagagagctcacacagtgctttccacacaccgaaattcacagttgatgcttc 13300973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 31732225 - 31732140
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||| ||    || ||||||||||||||||||||||||| |||||    
T  31732225 tattagttgtgaactttctctataaatagagagctcacacagtgctttacatacaccgaaattcacagttgatgcttcctgtgctt 31732140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 21323382 - 21323461
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||  |||   || |||||||||||||||||||||||||    
T  21323382 tattagttgtgaactttctctataaatagagagctcacacagtgttttccatacaccgaaattcacagttgatgcttcct 21323461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 23976993 - 23977070
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttc 235  Q
    ||||||| ||||| ||||||||||||||||||||||||||| |||||||   || | |||||||||||||||||||||    
T  23976993 tattagtagtgaactttctctataaatagagagctcacacagtgcattccatacactgaaattcacagttgatgcttc 23977070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 3666601 - 3666526
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttc 235  Q
    ||||||||||||| |||||||||||||||||||||||| ||  |||||||  || |||||||||||  ||||||||||    
T  3666601 tattagttgtgaattttctctataaatagagagctcacgcagggcattctacacaccgaaattcac--ttgatgcttc 3666526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 224
Target Start/End: Original strand, 15395246 - 15395312
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcaca 224  Q
    ||||||||||||| |||||||||||||||||||||||| |  ||||||||||||  || ||||||||    
T  15395246 tattagttgtgaattttctctataaatagagagctcactcggtgcattctggacaacggaattcaca 15395312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 36949473 - 36949388
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||| |||| ||| ||||||||||||||||||||||| |||||||   || |||||| ||||| |||||| ||||| |||||    
T  36949473 tattagttatgaattttttctataaatagagagctcacacagtgcattcaacacaccgaaaatcacaattgatgtttcctgtgctt 36949388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 41099219 - 41099170
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattc 206  Q
    |||||||||| ||| ||||||||||||||||| |||||||||||||||||    
T  41099219 ctattagttgggaagtttctctataaatagagggctcacacaatgcattc 41099170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 24435589 - 24435668
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||| | ||| |||||||||||||||||||||| |||| ||||||||  || ||||| | |||||| |||| |||||    
T  24435589 tattagtagagaactttctctataaatagagagctctcacagtgcattcttcacaccgaattccacagtcgatgattcct 24435668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 12044536 - 12044576
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacaca 198  Q
    ||||||||||||| |||||||| ||| ||||||||||||||    
T  12044536 tattagttgtgaattttctctagaaaaagagagctcacaca 12044576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 30373 - 30287
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||   || |||||||||||||||||||||||||||||||    
T  30373 ctattagttgtgaaatttctctataaatagagagctcacacactgcattcgacaccccgaaattcacagttgatgcttcctatgctt 30287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 193672 - 193758
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||| |||||    
T  193672 ctattagttgtgaagtttctctataaatagagggctcacacaatgcattcaggacaccgaaattcacagttgatgcttcctgtgctt 193758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 187986 - 188072
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||| ||||||||| |||||||||||||| || | ||||||||||||||| |||| ||||||| ||||||||||||||||| |||||    
T  187986 ctatcagttgtgaagtttctctataaatatagggttcacacaatgcattcaggaccccgaaatacacagttgatgcttcctgtgctt 188072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 7e-30; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 26981284 - 26981198
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||| |||||    
T  26981284 ctattagttgtgaaatttctttataaatagagagctcacacgatgcattctggaccccgaaatacacagttgatgcttcctgtgctt 26981198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 27073674 - 27073588
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||| ||||||||||| ||||| |||||    
T  27073674 ctattagttgtgaaatttctttataaatagagagctcacacgatgcattctggaccccgaaatacacagttgatgtttcctgtgctt 27073588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 14073824 - 14073754
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagtt 227  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||    
T  14073824 ctattagttgtgaaatttctctataaatagagagctcatacaatgcattccggaccccgaaattcacagtt 14073754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 24588584 - 24588666
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatg 240  Q
    |||||||| |||| ||||||||||||||||||||||||||| |||||||   || ||||||||||||||||||||||||||||    
T  24588584 tattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcctatg 24588666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 18387621 - 18387535
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||| ||||||| ||||| |||||||||||||||||||||||||||| ||||| || ||| |||||||||||| ||||| |||||    
T  18387621 ctattaattgtgaagtttctgtataaatagagagctcacacaatgcattttggaccccaaaaatcacagttgatgattcctgtgctt 18387535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 16625104 - 16625019
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || ||||||||||||||||||||||||| |||||    
T  16625104 tattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 16625019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 6112165 - 6112242
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttc 235  Q
    ||||||||| ||| ||||| ||||||||||||||||||||| |||||||   || |||||||||||||||||||||||    
T  6112165 tattagttgggaactttctatataaatagagagctcacacagtgcattcaacacaccgaaattcacagttgatgcttc 6112242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 19772418 - 19772495
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttc 235  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || |||||||||||||||||||||||    
T  19772418 tattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttc 19772495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 15704317 - 15704396
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || |||| ||||||||||||||||||||    
T  15704317 tattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgagattcacagttgatgcttcct 15704396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 22807039 - 22806954
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | ||||||||||||| || |||||||| ||||||||  || |||||||||||||||||| |||||| |||||    
T  22807039 tattagttgtaaactatctctataaatagggaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 22806954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 22949904 - 22949835
Alignment:
Q  174 tctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||||| |||||||| ||||||||  || |||||||||||||||||| |||||| |||||    
T  22949904 tctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 22949835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 22953860 - 22953791
Alignment:
Q  174 tctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||||| |||||||| ||||||||  || |||||||||||||||||| |||||| |||||    
T  22953860 tctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 22953791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 23872348 - 23872279
Alignment:
Q  174 tctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||||| |||||||| ||||||||  || |||||||||||||||||| |||||| |||||    
T  23872348 tctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 23872279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 23876304 - 23876235
Alignment:
Q  174 tctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||||| |||||||| ||||||||  || |||||||||||||||||| |||||| |||||    
T  23876304 tctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 23876235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 31477110 - 31477195
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || || ||||||||||||||||||| || |||||    
T  31477110 tattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccaaaattcacagttgatgctttctttgctt 31477195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 27324467 - 27324544
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    |||||||||| || | |||||||||||||||| |||||||  ||||||||  || |||||||||||||||||||||||||    
T  27324467 tattagttgtaaactatctctataaatagagaactcacac--tgcattctacacaccgaaattcacagttgatgcttcct 27324544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 2077498 - 2077415
Alignment:
Q  160 ttagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||| || | || ||||||||||||| ||| |||| ||||||||  || ||||||||||||||||||||||||| |||||    
T  2077498 ttagttgtaaactatccctataaatagagaactctcacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 2077415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 16761051 - 16760985
Alignment:
Q  177 ctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    ||||||||||||| |||||||| ||||||||  || |||||||||||||||||| |||||| |||||    
T  16761051 ctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 16760985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 19802580 - 19802531
Alignment:
Q  9 cattttcatatgtcaatattacgttttgaatgtcaaaaaagcaattttct 58  Q
    ||||||||| ||||||||| | ||||||||||||||||||| ||||||||    
T  19802580 cattttcatgtgtcaatatgatgttttgaatgtcaaaaaagtaattttct 19802531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 19803258 - 19803303
Alignment:
Q  9 cattttcatatgtcaatattacgttttgaatgtcaaaaaagcaatt 54  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||    
T  19803258 cattttcatgtgtcaatattacgttttgaatgtcagaagagcaatt 19803303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 15645386 - 15645337
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattct 207  Q
    ||||||||| ||| ||||| ||||||||||||||||||| ||| ||||||    
T  15645386 tattagttgcgaattttctatataaatagagagctcacataatccattct 15645337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 1634949 - 1634993
Alignment:
Q  9 cattttcatatgtcaatattacgttttgaatgtcaaaaaagcaat 53  Q
    ||||| ||| ||||||||| ||||||||||||||| |||||||||    
T  1634949 catttccatgtgtcaatataacgttttgaatgtcagaaaagcaat 1634993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 2862884 - 2862916
Alignment:
Q  164 ttgtgaaatttctctataaatagagagctcaca 196  Q
    ||||||| |||||||||||||||||||||||||    
T  2862884 ttgtgaattttctctataaatagagagctcaca 2862916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 15640998 - 15640950
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattc 206  Q
    ||||||||||||| | ||||||||||||| ||||||||| ||| |||||    
T  15640998 tattagttgtgaattctctctataaatagtgagctcacataattcattc 15640950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 7e-30; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 14804193 - 14804107
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||| ||||| |||||    
T  14804193 ctattagttgtgaaatttctctataaatagagagctcacgcaatgcattctagaccccgaaattcacagttgatgattcctgtgctt 14804107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 14819661 - 14819587
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatg 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  14819661 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctagaccccgaaattcacagttgatg 14819587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 22428602 - 22428686
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||    
T  22428602 tattagttgtgaagtttctctataaatagagagctcacacaatgcattctggac-ccgaaattcacagttgatgattcctgtgctt 22428686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 26199044 - 26198961
Alignment:
Q  160 ttagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||    
T  26199044 ttagctgtgaagtttctctataaatagagagctcacacaatgcattctgtacaccgaaattcacagttgatgcttcctgtgctt 26198961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 16836698 - 16836769
Alignment:
Q  164 ttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttc 235  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  16836698 ttgtgaattttctctataaatagagagctcacacagtgcattctggacaccgaaattcacagttgatgcttc 16836769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 2367716 - 2367646
Alignment:
Q  173 ttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||    
T  2367716 ttctctataaatagagagctcacacaatgcattctggacacggaaattcacagttgatgcttcctgtgctt 2367646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 2384667 - 2384737
Alignment:
Q  173 ttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||    
T  2384667 ttctctataaatagagagctcacacaatgcattctggacacggaaattcacagttgatgcttcctgtgctt 2384737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 1067169 - 1067090
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| |||||||||||||||||| |||||||| |||||| |||||  ||||||||||||||||||||||||    
T  1067169 tattagttgtgaattttctctataaatagagaactcacacattgcattatggacaacgaaattcacagttgatgcttcct 1067090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 40232794 - 40232873
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||   || |||||||||||||||||||||||||    
T  40232794 tattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcct 40232873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 19725312 - 19725395
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    ||||||||||||  ||||||||||||||||||| ||||||| |||||||||| | ||||||||||||||||||||||||| |||||    
T  19725312 tattagttgtga--tttctctataaatagagagttcacacattgcattctgggcaccgaaattcacagttgatgcttcctgtgctt 19725395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 13894004 - 13893925
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||  || | |||| ||||||||||||||||||    
T  13894004 tattagttgtgaattttctctataaatagagagttcacacaatgcattctacacactgaaaatcacagttgatgcttcct 13893925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 19727053 - 19726975
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    |||||||||||  ||||||| ||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||    
T  19727053 tattagttgtgtgatttctcgataaatagagagctcacacaa-gcattctggataccgaaattcacagttgatgcttcct 19726975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 21498340 - 21498254
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| ||| ||||||||||||||||| |||||||||||||||||   || ||||||| ||||||||||||||||| |||||    
T  21498340 ctattagttgggaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacagttgatgcttcctgtgctt 21498254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 39243429 - 39243514
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || ||||||||||||||||||||||||| |||||    
T  39243429 tattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 39243514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 39246984 - 39247069
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || ||||||||||||||||||||||||| |||||    
T  39246984 tattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 39247069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 41097364 - 41097441
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttc 235  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||| |||   || |||||||||||||||||||||||    
T  41097364 tattagttgtgaactttctctataaatagagagctcacacagtgctttccacacaccgaaattcacagttgatgcttc 41097441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 3094777 - 3094698
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| ||||||||||||||||||| ||||||| |||||||   || |||||||||||||||||| ||||||    
T  3094777 tattagttgtgaactttctctataaatagagagttcacacagtgcattccacacaccgaaattcacagttgatacttcct 3094698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 1924460 - 1924545
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || |||||||||||||||||| |||||| |||||    
T  1924460 tattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 1924545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 20923474 - 20923559
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || |||||||||||||||||| |||||| |||||    
T  20923474 tattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 20923559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 33055723 - 33055651
Alignment:
Q  159 attagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatg 231  Q
    |||||||||||| ||||||||||||||||||| ||||||| ||||||||  || || ||||||||||||||||    
T  33055723 attagttgtgaactttctctataaatagagagttcacacagtgcattctatacaccaaaattcacagttgatg 33055651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 17213850 - 17213932
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatg 240  Q
    ||||||||||||| ||||||||||||||||||||||||||| | |||||   || |||||||| | |||||||| ||||||||    
T  17213850 tattagttgtgaactttctctataaatagagagctcacacagtacattcgatacaccgaaatttatagttgatgtttcctatg 17213932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 41387381 - 41387455
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgc 232  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || ||||||||||||||||||||    
T  41387381 tattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgc 41387455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 237
Target Start/End: Original strand, 26319593 - 26319658
Alignment:
Q  172 tttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    |||||||||||||| |||||||||||||||||||||  || || |||  |||||||||||||||||    
T  26319593 tttctctataaataaagagctcacacaatgcattcttcacaccaaaaaacacagttgatgcttcct 26319658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 206
Target Start/End: Original strand, 52100627 - 52100676
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattc 206  Q
    |||||||||||||| ||||||||||||||||| ||||| |||||||||||    
T  52100627 ctattagttgtgaagtttctctataaatagagggctcatacaatgcattc 52100676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 37560774 - 37560829
Alignment:
Q  1 aaaaatggcattttcatatgtcaatattacgttttgaatgtcaaaaaagcaatttt 56  Q
    ||||||| |||||  |||||||||||| ||||||||||||||||||||| ||||||    
T  37560774 aaaaatgtcatttcaatatgtcaatatgacgttttgaatgtcaaaaaagtaatttt 37560829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 31868381 - 31868332
Alignment:
Q  9 cattttcatatgtcaatattacgttttgaatgtcaaaaaagcaattttct 58  Q
    ||||||||| |||||| || ||||||||||| ||||||||||||||||||    
T  31868381 cattttcatgtgtcaacatgacgttttgaatatcaaaaaagcaattttct 31868332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 192
Target Start/End: Original strand, 8267258 - 8267292
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagct 192  Q
    ||||||||||||| |||||||||||||||||||||    
T  8267258 tattagttgtgaactttctctataaatagagagct 8267292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 32306320 - 32306369
Alignment:
Q  62 ctctttacccaacagattttgctcgtgcccaactaaaataccgaaaatac 111  Q
    |||||||||||| | |||||||||| |||||||| || ||||||||||||    
T  32306320 ctctttacccaatacattttgctcgggcccaactgaattaccgaaaatac 32306369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 3e-29; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 9185090 - 9185175
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||| |||||    
T  9185090 tattagttgtgaaatttctctacaaatagagagctcacacaatgcattctggaccccgaaattcagagttgatgattcctgtgctt 9185175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 14868474 - 14868559
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||| |||||    
T  14868474 tattagttgtgaagtttctctataaatagagagctcacacagtgcattctggaccccgaaattcacagttgatgattcctgtgctt 14868559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 14877460 - 14877375
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||| |||||    
T  14877460 tattagttgtgaagtttctctataaatagagagctcacacagtgcattctggaccccgaaattcacagttgatgattcctgtgctt 14877375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 15225854 - 15225768
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||  || ||||||||||||||||||||||||| |||||    
T  15225854 ctattagttgtgaaatttctctataaatagagagctcacagagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 15225768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 9190955 - 9191040
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||| |||||||| ||||| |||||    
T  9190955 tattagttgtgaaatttctctacaaatagagagctcacacaatgcattatggaccccgaaattcagagttgatgattcctgtgctt 9191040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 14899022 - 14899095
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatg 231  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  14899022 tattagttgtgaagtttctctataaatagagagctcacacagtgcattctggaccccgaaattcacagttgatg 14899095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 26034877 - 26034803
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatg 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||| ||||    
T  26034877 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggaccctgaaatacacagtcgatg 26034803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 34561112 - 34561027
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    ||||||||||||| ||||||||||||||||||||||||| | ||| |||   || ||||||||||||||||||||||||| |||||    
T  34561112 tattagttgtgaactttctctataaatagagagctcacatagtgctttcgatacaccgaaattcacagttgatgcttcctgtgctt 34561027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 7902517 - 7902602
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||| ||    || |||||||||||| |||||||||||| |||||    
T  7902517 tattagttgtgaactttctctataaatagagagctcacacagtgctttacacacaccgaaattcacatttgatgcttcctgtgctt 7902602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 10713612 - 10713543
Alignment:
Q  174 tctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||||| |||||||| ||||||||  || ||||||||||||||||||||||||| |||||    
T  10713612 tctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 10713543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 10927382 - 10927313
Alignment:
Q  174 tctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||||| |||||||| ||||||||  || ||||||||||||||||||||||||| |||||    
T  10927382 tctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 10927313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 12488486 - 12488401
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || |||||||||||||||||| |||||| |||||    
T  12488486 tattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 12488401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 14953461 - 14953546
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || |||||||||||||||||| |||||| |||||    
T  14953461 tattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 14953546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 15011222 - 15011307
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| |||||| |  || ||||||||||||||||||||||||| |||||    
T  15011222 tattagttgtaaactatctctataaatagagaactcacacagtgcattatacacaccgaaattcacagttgatgcttcctgtgctt 15011307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 31297901 - 31297977
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgctt 234  Q
    ||||||||||||| | ||||||||||||||||||||||||| |||||||   || |||||||||||| |||||||||    
T  31297901 tattagttgtgaactctctctataaatagagagctcacacagtgcattccatacaccgaaattcacaattgatgctt 31297977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 3997468 - 3997547
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| ||||||||||||||||||||||||| | ||| ||    || |||||||||||||||||||||||||    
T  3997468 tattagttgtgaactttctctataaatagagagctcacatattgctttacacacaccgaaattcacagttgatgcttcct 3997547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 13521391 - 13521470
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| ||| ||||||||||||||||||||||| |||||||   |   ||||||||||||||||||||||||    
T  13521391 tattagttgtgaactttatctataaatagagagctcacacagtgcattccacaaatcgaaattcacagttgatgcttcct 13521470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 41817455 - 41817393
Alignment:
Q  173 ttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttc 235  Q
    |||||| ||||||||||||||||||| ||||||||  || |||||||||||||||||||||||    
T  41817455 ttctctgtaaatagagagctcacacagtgcattctacacaccgaaattcacagttgatgcttc 41817393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 47575350 - 47575276
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgc 232  Q
    ||||||||||||| |||||||||||| |||||||||||||| |||||||   || |||||||||| |||||||||    
T  47575350 tattagttgtgaattttctctataaaaagagagctcacacagtgcattccacacaccgaaattcaaagttgatgc 47575276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 8660809 - 8660894
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    ||||||| ||||| ||||||| ||||||||||||||||||| |||| | |  || |||| |||||||||||||||||||| |||||    
T  8660809 tattagtagtgaattttctctgtaaatagagagctcacacagtgcagtatacacaccgagattcacagttgatgcttcctgtgctt 8660894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 25690666 - 25690597
Alignment:
Q  174 tctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||||| |||||||| ||||||||  || |||||||||||||||||| |||||| |||||    
T  25690666 tctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 25690597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 31323526 - 31323583
Alignment:
Q  62 ctctttacccaacagattttgctcgtgcccaactaaaataccgaaaatactcatgcgt 119  Q
    |||||||||||| |||||||||||| |||||||| ||||||||||||||||| |||||    
T  31323526 ctctttacccaagagattttgctcgcgcccaactgaaataccgaaaatactcctgcgt 31323583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 39320250 - 39320202
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattc 206  Q
    ||||||||||||| |||| |||||||||||||||||||||||| |||||    
T  39320250 tattagttgtgaactttcactataaatagagagctcacacaattcattc 39320202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 53687757 - 53687700
Alignment:
Q  1 aaaaatggcattttcatatgtcaatattacgttttgaatgtcaaaaaagcaattttct 58  Q
    ||||||| |||||| || ||||||||| ||||||||||||||| ||||| ||||||||    
T  53687757 aaaaatgtcatttttatgtgtcaatatgacgttttgaatgtcagaaaagtaattttct 53687700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 18023276 - 18023224
Alignment:
Q  191 ctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||| ||||||||  || ||||||||||||||||||||||||| |||||    
T  18023276 ctcacacactgcattctacacaccgaaattcacagttgatgcttcctgtgctt 18023224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 10011760 - 10011709
Alignment:
Q  62 ctctttacccaacagattttgctcgtgcccaactaaaataccgaaaatactc 113  Q
    ||||| |||||||| |||||||||| | |||||| |||||||||||||||||    
T  10011760 ctcttaacccaacacattttgctcgcgtccaactgaaataccgaaaatactc 10011709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 10018901 - 10018850
Alignment:
Q  62 ctctttacccaacagattttgctcgtgcccaactaaaataccgaaaatactc 113  Q
    ||||| |||||||| |||||||||| | |||||| |||||||||||||||||    
T  10018901 ctcttaacccaacacattttgctcgcgtccaactgaaataccgaaaatactc 10018850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 196
Target Start/End: Complemental strand, 32545571 - 32545533
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcaca 196  Q
    ||||||||| ||| |||||||||||||||||||||||||    
T  32545571 tattagttgcgaattttctctataaatagagagctcaca 32545533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 52742630 - 52742668
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcaca 196  Q
    |||||||||| || |||||||||||||||||||||||||    
T  52742630 tattagttgtcaattttctctataaatagagagctcaca 52742668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 55073834 - 55073797
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcac 195  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  55073834 tattagttgtgaattttctctataaatagagatctcac 55073797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 199879 - 199795
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||| |||||    
T  199879 ctattagttgcgaagtttctctataaatagagagctcacacaatgcattctgga--ccgaaattcacagttgatgattcctgtgctt 199795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 9286 - 9365
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||   || |||||||||||||||||||||||||    
T  9286 tattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcct 9365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 35110 - 35195
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||| |||   || ||||||||||||||||||||||||| |||||    
T  35110 tattagttgtgaactttctctataaatagagagctcacacagtgctttcgatacaccgaaattcacagttgatgcttcctgtgctt 35195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 121254 - 121169
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || |||||||||||||||||||||||||||||||    
T  121254 tattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctatgctt 121169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 81247 - 81161
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| ||| ||||||||||||||||| |||||||||||||||||   || ||||||||||||||||||| ||||| |||||    
T  81247 ctattagttgggaagtttctctataaatagagggctcacacaatgcattcaacaccccgaaattcacagttgatgattcctgtgctt 81161  T

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Target: scaffold0044; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 64849 - 64775
Alignment:
Q  157 ctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatg 231  Q
    |||||||||| ||| ||||||||||||||||| ||||||||||||| | |   || |||||||||||||||||||    
T  64849 ctattagttgggaagtttctctataaatagagggctcacacaatgcgtacaacaccccgaaattcacagttgatg 64775  T

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Target: scaffold0572 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 10382 - 10467
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || ||||||||||||||||||||||||| |||||    
T  10382 tattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 10467  T

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Target: scaffold0155 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 237
Target Start/End: Complemental strand, 22337 - 22284
Alignment:
Q  184 tagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22337 tagagagctcacacaatgcattctggaccccgaaattcacagttgatgcttcct 22284  T

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Target: scaffold0144 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 7565 - 7480
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || ||||||||||||||||||||||||| |||||    
T  7565 tattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 7480  T

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Target: scaffold0060 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 47379 - 47464
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||| ||    || ||||||||||||||||||||||||| |||||    
T  47379 tattagttgtgaactttctctataaatagagagctcacacagtgctttacatacaccgaaattcacagttgatgcttcctgtgctt 47464  T

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Target: scaffold0060; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 52323 - 52408
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||| ||    || ||||||||||||||||||||||||| |||||    
T  52323 tattagttgtgaactttctctataaatagagagctcacacagtgctttacatacaccgaaattcacagttgatgcttcctgtgctt 52408  T

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Target: scaffold0011 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 127091 - 127006
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || ||||||||||||||||||||||||| |||||    
T  127091 tattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgctt 127006  T

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Target: scaffold0009 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 71820 - 71740
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaa-ttcacagttgatgcttcct 237  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||  || || ||| |||||||||||||||||||    
T  71820 tattagttgtgaattttctctataaatagagagctcacacagtgcattctacacaccaaaatttcacagttgatgcttcct 71740  T

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Target: scaffold0431 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 14883 - 14960
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttc 235  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || |||||||||||||||||||||||    
T  14883 tattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttc 14960  T

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Target: scaffold0415 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 1176 - 1091
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || |||||||||||||||||| |||||| |||||    
T  1176 tattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 1091  T

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Target: scaffold0229 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 10832 - 10917
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || |||||||||||||||||| |||||| |||||    
T  10832 tattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 10917  T

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Target: scaffold0157 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 31991 - 32076
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || |||||||||||||||||| |||||| |||||    
T  31991 tattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 32076  T

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Target: scaffold0141 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 13418 - 13503
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || |||||||||||||||||| |||||| |||||    
T  13418 tattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 13503  T

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Target: scaffold0124 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 21392 - 21477
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || |||||||||||||||||| |||||| |||||    
T  21392 tattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 21477  T

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Target: scaffold0070 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 59114 - 59029
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||| |||   || |||||||||| | |||||||||||| |||||    
T  59114 tattagttgtgaactttctctataaatagagagctcacataatgctttccatacaccgaaattcataattgatgcttcctgtgctt 59029  T

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Target: scaffold0070; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 190
Target Start/End: Complemental strand, 63316 - 63284
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagag 190  Q
    ||||||||||||| |||||||||||||||||||    
T  63316 tattagttgtgaactttctctataaatagagag 63284  T

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Target: scaffold0452 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 12374 - 12450
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgctt 234  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || ||||||||||||||||||||||    
T  12374 tattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgctt 12450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 49390 - 49469
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| |||||||||||||||||| |||||||| ||| |||   || ||||||||||||||||| |||||||    
T  49390 tattagttgtgaactttctctataaatagagaactcacacagtgctttcaatacaccgaaattcacagttgacgcttcct 49469  T

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Target: scaffold0017 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 149244 - 149165
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    ||||||||||||| |||||||||||||||||| |||||||| ||| |||   || ||||||||||||||||| |||||||    
T  149244 tattagttgtgaactttctctataaatagagaactcacacagtgctttcaatacaccgaaattcacagttgacgcttcct 149165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 7076 - 6999
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttc 235  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || |||||||||| ||||||||||||    
T  7076 tattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcatagttgatgcttc 6999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 5287 - 5372
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||| || | || ||||||||||||| |||||||| ||||| ||  || ||||||||||||||||||||||||| |||||    
T  5287 tattagttgtaaactatccctataaatagagaactcacacagtgcatcctacacaccgaaattcacagttgatgcttcctgtgctt 5372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 35433 - 35502
Alignment:
Q  174 tctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcctatgctt 243  Q
    |||||||||||||||| |||||||| ||||||||  || |||||||||||||||||| |||||| |||||    
T  35433 tctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgctt 35502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 646 - 725
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    |||||||| |||| |||||||| | |||||||||||||||| ||| |||   || |||||||||||||||||||||||||    
T  646 tattagttatgaactttctctacatatagagagctcacacagtgctttcaatacaccgaaattcacagttgatgcttcct 725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 21979 - 21916
Alignment:
Q  174 tctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    |||||||||||||||| |||||||| ||||||||  || | |||||||||||||||||||||||    
T  21979 tctctataaatagagaactcacacagtgcattctacacactgaaattcacagttgatgcttcct 21916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 7855 - 7776
Alignment:
Q  158 tattagttgtgaaatttctctataaatagagagctcacacaatgcattctggactccgaaattcacagttgatgcttcct 237  Q
    |||||||||| || | |||||||||||||||| |||||||| ||||||||  || | |||||||||| || |||||||||    
T  7855 tattagttgtaaactatctctataaatagagaactcacacagtgcattctacacacagaaattcacaatttatgcttcct 7776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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