View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15074_high_5 (Length: 325)
Name: NF15074_high_5
Description: NF15074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15074_high_5 |
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Alignment Details
Target: chr8 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 43 - 311
Target Start/End: Original strand, 43394012 - 43394280
Alignment:
| Q |
43 |
cctcttcctctgaattatccgcatactcaattactcaacaccaaaagaaacatcaaattcaacataatttgttcttgttttcaacattttgtaaactcac |
142 |
Q |
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| T |
43394012 |
cctcttcctctgaattatccgcatactcaattactcaacgccaaaagaaacatcaaattcaacataatttgttcttgttttcaacattttgtaaactcac |
43394111 |
T |
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| Q |
143 |
agaagaaactataaatactaaaagaaactagcatcacacaaacataaataaataagaagaagaaatcttactttgaagaaggaggagaaacctgtggttt |
242 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43394112 |
agaagaaactataaacactaaaagaaactagcatcacacaaacataaataaataagaagaagaaatcttactttgaagaaggaggagaaacctgtggttt |
43394211 |
T |
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| Q |
243 |
gttatcatgcaaaggctttggagagtgtgtaacagtttctttaacaacaactgaagcagagaaagggtt |
311 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43394212 |
gttatcatgcaaaggctttggagagtgtgtaacagtttctttaacaacaactgaagcagagaaagggtt |
43394280 |
T |
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