View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15075_high_44 (Length: 241)
Name: NF15075_high_44
Description: NF15075
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15075_high_44 |
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Alignment Details
Target: chr1 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 20 - 234
Target Start/End: Original strand, 37590214 - 37590425
Alignment:
| Q |
20 |
gacaccgcctctccctccttagccgtagaactgagcgatccataaaccctgaactccaaaatccaccggaaaccatgtccgacgacaaaaccaccgacca |
119 |
Q |
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| T |
37590214 |
gacaccgcctcaccctccttagccgtagaactgagcgatccataaaccctgaactccaaaatccaccggaaaccatgtccgacgacaaaaccaccgacca |
37590313 |
T |
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| Q |
120 |
acaatacggcgttctcctctactacaagtacgtcgatattccaaacctcaatgacctcctcactttctaccgctccaactgctcttccctctctatcctc |
219 |
Q |
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| T |
37590314 |
a---tacggcgttctcctctactacaagtacgtcgatattccaaacctcaatgacctcctcactttctaccgctccaactgctcttccctctctctcctc |
37590410 |
T |
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| Q |
220 |
ggccgcgttcatctc |
234 |
Q |
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|||||||||| |||| |
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| T |
37590411 |
ggccgcgttcgtctc |
37590425 |
T |
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