View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15075_low_36 (Length: 276)
Name: NF15075_low_36
Description: NF15075
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15075_low_36 |
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Alignment Details
Target: chr4 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 41013180 - 41012926
Alignment:
| Q |
1 |
ttgagttatgtaggttacttacttaatccacaagtgcttttttataatttattgtctttattttattctcctcctcctacaatgctactcgatccgcacc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41013180 |
ttgagttatgtaggttacttacttaatccacaagtgcttttttataatttattgtctttattttattctcctcctcctacaatgctactcgatccgcacc |
41013081 |
T |
|
| Q |
101 |
tactttcttggtgggaatgaaacttccaatgacannnnnnnnccctttgacaaaaggctgtcaatagtactagttactttcaagtttctatggctatata |
200 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
41013080 |
tactttcttggtgggaatgaaacttccaatgacattttttttccctttgacaaaaggctatcaatagtactagttactttcaagtttctatggctatata |
41012981 |
T |
|
| Q |
201 |
ctcatctcaacatcaacttttttagaatctgctcatttatcaaacccattatcat |
255 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41012980 |
ctcatctcaacatcaacttttttagaatctgctcatttatcaaacccattatcat |
41012926 |
T |
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